CsGy6G007360 (gene) Cucumber (Gy14) v2

NameCsGy6G007360
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUnknown Protein
LocationChr6 : 6238232 .. 6239316 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAATTAAAAGGGAAAGACTTGATGTATATGAGTATTTGATCCTTGGAGATATTTTGTCATGGTTTGACGTGAGCAGATGAGGCTTCCTCTGCTATACCCCCACTTTTCTTTTCTTCCTTTTTGTTATTTTTTCTTTGTTGATTTTTTTTCTTTCATTTTTATTTTGGGTTTGACTTGCAAATTACTTGTAACTGTTGAGAATGTGAGAGACAGAGGGAGCTCATGTGAAAAATTTTGAAATGAACTAATTATCAAAATTTCCTTTGCTTTGCTTTCTAGTATTCCTTGTAAGCTTACTATTCTATTACTTAGTTTAGGCATCTATTTTCTTTTACTGTTTTCATCAAGAGATCTCAGCAGGCAATGGCTCAAAGGCTGAGCATGATTCTACCAAAATCAATTGAATGTTAAAAAGTTGAGATGATATGGAGTTCTATGGACACAATTTTTATACTATACAGTATATACATTCATTGTTTATCATTAAAAAGTATATAAGAATTGTATGGCACCAATAGAAAATTGATGTTATACTATCTAATTACGTGGGAGGTATTGATTTGTTCTTTTAGTTGAAGTTTGATCACATCAACCTAAGGTCATATGTGACTTGATATGATATGTTAGACCTTGTTAGATTGACTCTTAGTTTATTGATTTTGTACATTTGATTGACGTATGAAGATTCGATTGAAGCTCTTAAGTTTGATGTACATTAGATGTCTTCAATCTATCTTCAAGGTCCTTAAATCTTTAAAATAGACTTTTGGTCCATCCAACATTTTAAATGCTATGAATTCTCAAAATCTTAAACATTGAAACACACATCACCCAACATTTTTTGGAAGTTAGAGCTTGGAATTTAAACTTGTTTGTTCTTTAGAGTATTTGTGGCCTTCATATAGTATTTGATTCTCAAGAGTTTAGTCTTTCATTGGTAGAATCTGAATTCATTTCTGAACTTGAAAACGAAGAACTTCTCTATCTAATACCTTTCTATGAGTATTGTGGGCTTGGGCTTAACTATTTAGATTTGGGCTTAGATGGCCTTGAACCTAACCTCTTCGGGTTTGGACTTTGA

mRNA sequence

ATGGAAATTAAAAGGGAAAGACTTGATGTATATGAGTATTTGATCCTTGGAGATATTTTGTCATGGTTTGACAGATCTCAGCAGGCAATGGCTCAAAGGCTGAGCATGATTCTACCAAAATCAATTGAATATTCGATTGAAGCTCTTAAGTTTGATAGTATTTGTGGCCTTCATATAGTATTTGATTCTCAAGAGTTTAGTCTTTCATTGGTAGAATCTGAATTCATTTCTGAACTTGAAAACGAAGAACTTCTCTATCTAATACCTTTCTATGAGTATTGTGGGCTTGGGCTTAACTATTTAGATTTGGGCTTAGATGGCCTTGAACCTAACCTCTTCGGGTTTGGACTTTGA

Coding sequence (CDS)

ATGGAAATTAAAAGGGAAAGACTTGATGTATATGAGTATTTGATCCTTGGAGATATTTTGTCATGGTTTGACAGATCTCAGCAGGCAATGGCTCAAAGGCTGAGCATGATTCTACCAAAATCAATTGAATATTCGATTGAAGCTCTTAAGTTTGATAGTATTTGTGGCCTTCATATAGTATTTGATTCTCAAGAGTTTAGTCTTTCATTGGTAGAATCTGAATTCATTTCTGAACTTGAAAACGAAGAACTTCTCTATCTAATACCTTTCTATGAGTATTGTGGGCTTGGGCTTAACTATTTAGATTTGGGCTTAGATGGCCTTGAACCTAACCTCTTCGGGTTTGGACTTTGA

Protein sequence

MEIKRERLDVYEYLILGDILSWFDRSQQAMAQRLSMILPKSIEYSIEALKFDSICGLHIVFDSQEFSLSLVESEFISELENEELLYLIPFYEYCGLGLNYLDLGLDGLEPNLFGFGL
BLAST of CsGy6G007360 vs. NCBI nr
Match: XP_011658395.1 (PREDICTED: ethylene-responsive transcription factor ERF113 [Cucumis sativus])

HSP 1 Score: 53.5 bits (127), Expect = 5.5e-04
Identity = 24/27 (88.89%), Postives = 25/27 (92.59%), Query Frame = 0

Query: 1  MEIKRERLDVYEYLILGDILSWFDRSQ 28
          MEIKRERLDVYEYLILGDILSWFD  +
Sbjct: 1  MEIKRERLDVYEYLILGDILSWFDEKK 27

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011658395.15.5e-0488.89PREDICTED: ethylene-responsive transcription factor ERF113 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G007360.1CsGy6G007360.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None