CsGy6G001880 (gene) Cucumber (Gy14) v2

Overview
NameCsGy6G001880
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUnknown Protein
LocationChr6 : 1341650 .. 1342672 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATAATCAATCATCTGTTTATTCCCAACTCAATTCTTATTTTTTTCAAGTATATTACTCCACTAATTTGATACAACTAACTATAATCTTTCTTTTGATCACTACTAAAGAATCATCATGGCTTTATGGTGAGAAACAAGTAGAAACTGAATTTGAGGTTTCTTTCATTCCCAACTCAATTTTCGTATCTTTGTGTTGATACACTCGACTAATCTTATAGAAAACTCAGGTACCTATAACTATATAATTGATGAAACTAAGTTTCTGTTTTTTCTTACTTTTAGAGCATCTTCAAGGCTTTGTGGTGAGATAAAAACAGAATTGAGGATTCCTTCGAAATAAAGAAGAATTGAAAGTTTGCTTCTAATGACTCTCTAGTACTCCATGTGTTTGTTTTAAATGATATCTAATTTTATTTCTCGTTAGTGGGACATTTATATAATTTAAGTTGTGATCTTAGGCTCATTTGGTATTTGATTAAATAAATAATAGTTCATTCTATTTTTCTATTATTCACAATTTCATAATATATAGAGTTGATAAATATGAAAAATAATCTATTATTTTGAGGAACTTTTTTTTTTTTTTGCTTTTATAAATATGGGGACTATACAATGGATCCCATTAAAATTTAATTTTAACTTTAAAGAATAATTAAAAAATCTTTAAAAAGTATGGAAACAAAATGTGAAAGTATTTCATCAAACAATCAAAATCACACTTTATCAAAGTATACATATAAGAAAGATAACTGCAATAAATAACACTTTTAGCGTTTATTTAAAGAATTACGAACAAATATAGTAAACTCTAGATTCCATCACTTACTAAATGATTTAATAATTTAGGTATAGTTACTATGTTTACACATATAAGAATTCATGAACATTTGATCTTAATTTATTTGGAAGATGATTAGAAAAAGGGAAATGAGTGGATGAAAAAGGGGTATGAAGATGCATGGTTGTAGGTTCAATGGAAGAGGAAGTTTGAAATAGTAAGATTGGGACTTGTGATCTGA

mRNA sequence

ATGTATAATCAATCATCTGTTTATTCCCAACTCAATTCTTATTTTTTTCAAGTATATTACTCCACTAATTTGATACAACTAACTATAATCTTTCTTTTGATCACTACTAAAGAATCATCATGGCTTTATGGTGAGAAACAAGTAGAAACTGAATTTGAGGTTCAATGGAAGAGGAAGTTTGAAATAGTAAGATTGGGACTTGTGATCTGA

Coding sequence (CDS)

ATGTATAATCAATCATCTGTTTATTCCCAACTCAATTCTTATTTTTTTCAAGTATATTACTCCACTAATTTGATACAACTAACTATAATCTTTCTTTTGATCACTACTAAAGAATCATCATGGCTTTATGGTGAGAAACAAGTAGAAACTGAATTTGAGGTTCAATGGAAGAGGAAGTTTGAAATAGTAAGATTGGGACTTGTGATCTGA

Protein sequence

MYNQSSVYSQLNSYFFQVYYSTNLIQLTIIFLLITTKESSWLYGEKQVETEFEVQWKRKFEIVRLGLVI
Homology
The following BLAST results are available for this feature:
BLAST of CsGy6G001880 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsGy6G001880 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy6G001880 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy6G001880 vs. TrEMBL
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G001880.1CsGy6G001880.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy6G001880Melon (DHL92) v3.6.1cgybmedB406
CsGy6G001880Melon (DHL92) v3.6.1cgybmedB445
CsGy6G001880Watermelon (Charleston Gray)cgybwcgB397
CsGy6G001880Watermelon (Charleston Gray)cgybwcgB429
CsGy6G001880Watermelon (Charleston Gray)cgybwcgB451
CsGy6G001880Watermelon (97103) v1cgybwmB452
CsGy6G001880Watermelon (97103) v1cgybwmB455
CsGy6G001880Watermelon (97103) v1cgybwmB476
CsGy6G001880Watermelon (97103) v1cgybwmB497
CsGy6G001880Wild cucumber (PI 183967)cgybcpiB277
CsGy6G001880Wild cucumber (PI 183967)cgybcpiB288
CsGy6G001880Silver-seed gourdcarcgybB0023
CsGy6G001880Silver-seed gourdcarcgybB0284
CsGy6G001880Silver-seed gourdcarcgybB0562
CsGy6G001880Silver-seed gourdcarcgybB0673
CsGy6G001880Cucumber (Chinese Long) v3cgybcucB283
CsGy6G001880Cucumber (Chinese Long) v3cgybcucB292
CsGy6G001880Cucumber (Chinese Long) v3cgybcucB298
CsGy6G001880Watermelon (97103) v2cgybwmbB403
CsGy6G001880Watermelon (97103) v2cgybwmbB435
CsGy6G001880Watermelon (97103) v2cgybwmbB459
CsGy6G001880Wax gourdcgybwgoB558
CsGy6G001880Cucumber (Gy14) v2cgybcgybB130
CsGy6G001880Cucumber (Gy14) v2cgybcgybB145
CsGy6G001880Cucurbita maxima (Rimu)cgybcmaB737
CsGy6G001880Cucurbita maxima (Rimu)cgybcmaB741
CsGy6G001880Cucurbita maxima (Rimu)cgybcmaB832
CsGy6G001880Cucurbita maxima (Rimu)cgybcmaB836
CsGy6G001880Cucurbita maxima (Rimu)cgybcmaB840
CsGy6G001880Cucurbita maxima (Rimu)cgybcmaB842
CsGy6G001880Cucurbita maxima (Rimu)cgybcmaB859
CsGy6G001880Cucurbita maxima (Rimu)cgybcmaB860
CsGy6G001880Cucurbita moschata (Rifu)cgybcmoB722
CsGy6G001880Cucurbita moschata (Rifu)cgybcmoB812
CsGy6G001880Cucurbita moschata (Rifu)cgybcmoB816
CsGy6G001880Cucurbita moschata (Rifu)cgybcmoB820
CsGy6G001880Cucurbita moschata (Rifu)cgybcmoB841
CsGy6G001880Cucurbita moschata (Rifu)cgybcmoB842
CsGy6G001880Cucurbita pepo (Zucchini)cgybcpeB711
CsGy6G001880Cucurbita pepo (Zucchini)cgybcpeB741
CsGy6G001880Cucurbita pepo (Zucchini)cgybcpeB798
CsGy6G001880Cucurbita pepo (Zucchini)cgybcpeB803
CsGy6G001880Cucurbita pepo (Zucchini)cgybcpeB812
CsGy6G001880Cucurbita pepo (Zucchini)cgybcpeB835
CsGy6G001880Cucurbita pepo (Zucchini)cgybcpeB886
CsGy6G001880Cucumber (Chinese Long) v2cgybcuB270
CsGy6G001880Cucumber (Chinese Long) v2cgybcuB277
CsGy6G001880Cucumber (Chinese Long) v2cgybcuB282
CsGy6G001880Bottle gourd (USVL1VR-Ls)cgyblsiB396
CsGy6G001880Bottle gourd (USVL1VR-Ls)cgyblsiB409
CsGy6G001880Bottle gourd (USVL1VR-Ls)cgyblsiB424
CsGy6G001880Melon (DHL92) v3.5.1cgybmeB398
CsGy6G001880Melon (DHL92) v3.5.1cgybmeB407
CsGy6G001880Melon (DHL92) v3.5.1cgybmeB450