CsGy6G001630 (gene) Cucumber (Gy14) v2

Overview
NameCsGy6G001630
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionCytochrome c biogenesis FC
LocationChr6 : 1134533 .. 1138433 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGCAAAAATCAGGTCGATAATTCGATTTTATTTCCTCGGATCGTCGGCTTGTTGTGATTGGAATTCGTCTTTTCTTTTTATCATGCATTGAGACACCTGAAGAGTCGACCATATGTACCTTGCCTCAAGAGACCCGACCTATTCAAATTGATCAAAATGGTTGTACTACATGTGTATTGGATTTATTGGTTTAAATTAACTACGATCCGCTACTTCAACTTGCCATTTCTTTTCAAACCAAAAGAAGTACATCACTTCATGAAGTGATCACTTGTAAAGAAGTAGTTAGAGCTAGGCTCCGAACTGAAAGTTCGCTTTTCTTTCATTTTCTACCAGCGATCTGACCCCTTATTTGATCAGACTGCTCATGGTCTACGAACTAGTCATTAATGGTCGACTTCTTTGATATCTTTTCAGTATGCATTCCGAGCATTTTCATTTTAGCGTATCATCCTCTCTAGAGAAGCTCAACTTGAACATCTCGAGTAGAATGGTCCAACTAAATAACTTTTTCTTTTTCATTACTTCCATGGTCGTGCCTCGTGGCACGGCAGCACCCGTACTATTTCAATGGTTTGTCAGTAGAGACCCTTCTTCCAATGGTACTATAATTCCTATTCCTATCTCTTTATTCCCTCTTTTGGTCTATCTACATTCCAGGAAATTCATACGCTCCATGGACGGAGCAAAAAGTGCAGTCTTGGTCAGAGCAAGCCGCCCTTGGTCTATTACCGCATTTGAAAAACAATCCAAATATTGTAAAATTTGTGAGAGTTTATAATTGAAAGACTATATTGCACATATTCATTTATCACTCAAAAACTTTACTATATTTACAAATTTTTAAAAATAATGTTGATATACACTTGATTATTATCCCTAAAATTGTTACTAACTATAATTATTCATAATATTTACAATCACTCCAAAAATTAATCCATTGCCCAACCATCCAAATAACATTCCCAAAATCAGTCTAAAAGTAATCCAATTTATGATAAAAATGCTCAAATTCTTACCATAATTTACATTTTAAAAAACAAAGATTACTAGCAAAACTCCCATGAAAAAAACAGAACTAAGTTTTTAAAAATTAGTTGCTTTTGTTTAACATTTTTGGCTTAGTTTTTTTTAAAAATTTTATGCTCTTAGTCTTTACTTGGCATTGTTTCAAGAAAGGTGGGACGATAGGATAGACTAGTTGATTAATTTATCTAATTCTTATAAAAATAAGAATAAATCATTTTATTCCATGAATAAGAATACTAACGATAAACTTATATTTTATATATATATATATATGATATACAAGGATTAAAATATCCATAAATATTTACAACTTGTATTGAAGGATAAATGAATGAGTATTTAGATATTTTTGGAAAAACCATGGATATCACAAAAATGTATAAAAATCTTGTCAATTTCTCTTGAAATTTGAGAAGTAGTTTGTTCAAGTAATAAACTATGACTTTAATTTATAAATAGCCAAATATGATTGATAATGGAATTATAGACGAAAAGATGGATATGAACTAAATATTTTGATAAAGGTTAGGTCAAACAAAGTGAAGGTCCAATATAATATTCAATGGTAAAAAGATGATCTAGGAGGTACTAGCCTAGTTAGTGTCACGCCCCCACCTGAAACGCTTTCTCCCTCCTTGCCTTCTGGGTGCAAACTCAACCAGCACCTCGAAACGAAACGCCAGAACGTCCAGTCTTAAACTTTAAAAACTTCTTAATAACAATATTTTAAACTTCAAAATAACTAAACAACTTTATTATTATCTTTAAGCAACTTGGTACACATACAAAGCTTGACTTTAAAGAAAGCTAAAACTAAAGCTTCGAGCTCTCAACGCCTACAAACAGCTCCTAAGGCATGTCTTAATGCCTGGCTTACAACAACTCGCCTTTTCTTAATGGTCTTAGCGCCTCACTTACCTGGAGAATGGAAACTTAAAACATAAACCTAACGATTACTGAGCGACATTGAGAACCTTTGGAAAATACAAGTACATGTTCAAATTTATTTTGCAAGTTCAATATCACAACATCTCATCATGGGTTAAAAGCAATAAATACCACATTAGCCTCTACTTATTCCTTTCGCCAGAACATTGAACCACCCTCACACATAGACAACTGTGATGACACGGATCATCAACAGCATCCCTGGAGATTGCATATTCAACTATCGTTGCTCAGGCGATCAGCTTGAATGAGGACGTCTTAGTGCATTCAAACATTCTCTTCGCCATGTGGACCTTTTCCAACACATTGTTGCCTTGACTCTTATGTGCGGATTACCTACATCAAGCATATTATACGAGCATCATAAAATGAAATACTTTGACTTCAAAACATACTTTCAAATAGTTATGCTCTTCATATAAATCATAAATTTGATTACAACATGTAATATACTTTGCATCAAACTTTTAGAAAACTTTGTTCTCTCTTTAGAAGGGCCACTCACAAAAGTTTACGTTTTCTCCTAACCCCCTTCTTAATTCTCTTCTTCTCCTCGCCTCATGTCTTTCTAACAGAACTTCAACGCTTAAAATTTGTTATAACTTTCTTTGAACTTTCAAGGCCTATTTATACTAATTCTAAATTGGATTAGTCATCTGTAAATCTCATCTTAATTTGTTAGCTCCTACTTGGTGCCTTACACGTATAGGTTTAACATCTTCTCTAAACATCTTTAACTTTAATTCAACATGTAAGAAGCTTATTAATTTGATTTAATGAAGCTCCCTTTCCTTGTATGGCTTTCCTCGCTTAGCTCAAAGTGCATTACTAAACGTCCCTTCTCGCGTTAACTTGACTTAGCACAACTCCTAGCTTTACTTCGCATAATTTCCTTCCTTGCATCGCCTATGCTGCTTCTTCAGAATGTGTCACTCTTATACTTTGTCATTTTAACTTGTTTCACCTTAGAACGTGTAGTTCTTATACTTAATTAGCTTCCTTCTTACAACCTCCCTACTTTAAAACACGGATTTCACACCTAGCATTAGCATAATTTATTTGGTAATGGTAATATTGTTCTCAGGTCAAATAATGCTAAGAGATTTTAATATAATTAGAAGCATGGCAATATGTGAGTATCAACATCAACCCCAACGCTACCAATTGAAGGAGACCTTGGATCAAACCATGTTCCATCGAAATGAAGATGCTCTGAAGAATGCAAATAATATAGGGGCTGAGTCTAAGTTTAAGTCTTCATGACTTTTACGTCGAAATTGTGGTTTTCATAGGTAAACTGATACGTTACACCCATCAATATAGCCATAGGAACCATAATCACTTGAAAGATTATAGCTACTGTGAGAATAACCATAATTACTAACTGTAATAGACATATTGTCGATGTCCATATTAACTATTCAAACTCATCTCCTCCATACTCAAAACTAGTGAGTTAGCATCAACTTGAGCATCATCATGCATGGACCTTCTATGAATTATTCCTCCAATTTTTGGTCCACCGGTTCGATGGCTGTGGTCAGTGTCTTGTGTGGTATGCATGAATTGAGATTCTCCGGTGAATGGGGTAAGTTCTTTGTATTGCTAAACATCCTTCCGTATTGTGTCGTGCTTGAGCCTCCATCTTCTCTATCCTTACTTTAACTACCATCATGATCACCATCATCGTCACCTTCATTTTGTTGACCATTACTTTGTGGATCTTGGTCTAATTGTTGCTTTAATTTAAAGTATTTGTGTGATAGTATGCAACACGCATGTGTCGCTCAAAAGAATCAACATCACCAGTTGAATTACTATTTATTACCTCCTCATCAATGCGTAAATCTTTTGCAAAACTAGCAACATGTGGATCTAGATATCATAACTTGAAGCATCATAGAGATACACATACCTAA

mRNA sequence

ATGGAGGCAAAAATCAGCGTATCATCCTCTCTAGAGAAGCTCAACTTGAACATCTCGAGTAGAATGGTCCAACTAAATAACTTTTTCTTTTTCATTACTTCCATGGTCGTGCCTCGTGGCACGGCAGCACCCGTACTATTTCAATGGTTTGTCAGTAGAGACCCTTCTTCCAATGGTACTATAATTCCTATTCCTATCTCTTTATTCCCTCTTTTGGTCTATCTACATTCCAGGAAATTCATACGCTCCATGGACGGAGCAAAAAGTGCAGTCTTGTATGCAACACGCATGTGTCGCTCAAAAGAATCAACATCACCAGTTGAATTACTATTTATTACCTCCTCATCAATGCGTAAATCTTTTGCAAAACTAGCAACATGTGGATCTAGATATCATAACTTGAAGCATCATAGAGATACACATACCTAA

Coding sequence (CDS)

ATGGAGGCAAAAATCAGCGTATCATCCTCTCTAGAGAAGCTCAACTTGAACATCTCGAGTAGAATGGTCCAACTAAATAACTTTTTCTTTTTCATTACTTCCATGGTCGTGCCTCGTGGCACGGCAGCACCCGTACTATTTCAATGGTTTGTCAGTAGAGACCCTTCTTCCAATGGTACTATAATTCCTATTCCTATCTCTTTATTCCCTCTTTTGGTCTATCTACATTCCAGGAAATTCATACGCTCCATGGACGGAGCAAAAAGTGCAGTCTTGTATGCAACACGCATGTGTCGCTCAAAAGAATCAACATCACCAGTTGAATTACTATTTATTACCTCCTCATCAATGCGTAAATCTTTTGCAAAACTAGCAACATGTGGATCTAGATATCATAACTTGAAGCATCATAGAGATACACATACCTAA

Protein sequence

MEAKISVSSSLEKLNLNISSRMVQLNNFFFFITSMVVPRGTAAPVLFQWFVSRDPSSNGTIIPIPISLFPLLVYLHSRKFIRSMDGAKSAVLYATRMCRSKESTSPVELLFITSSSMRKSFAKLATCGSRYHNLKHHRDTHT
Homology
[Close]
BLAST of CsGy6G001630 vs. NCBI nr
Match: YP_004849321.1 (cytochrome c biogenesis FC (mitochondrion) [Cucumis sativus] >ADZ10748.1 cytochrome c biogenesis FC (mitochondrion) [Cucumis sativus])

HSP 1 Score: 137.5 bits (345), Expect = 3.5e-29
Identity = 71/76 (93.42%), Postives = 71/76 (93.42%), Query Frame = 0 

Query: 22 MVQLNNFFFFITSMVVPRGTAAPVLFQWFVSRD-----PSSNGTIIPIPISLFPLLVYLH 81
          MVQLNNFFFFITSMVVPRGTAAPVLFQWFVSRD     PSSNGTIIPIPISLFPLLVYLH
Sbjct: 1  MVQLNNFFFFITSMVVPRGTAAPVLFQWFVSRDVPTGAPSSNGTIIPIPISLFPLLVYLH 60

Query: 82 SRKFIRSMDGAKSAVL 93
          SRKFIRSMDGAKSAVL
Sbjct: 61 SRKFIRSMDGAKSAVL 76

[Close]
BLAST of CsGy6G001630 vs. NCBI nr
Match: AEN56115.1 (cytochrome c biogenesis FC (mitochondrion) [Cucumis melo subsp. melo])

HSP 1 Score: 136.0 bits (341), Expect = 1.0e-28
Identity = 70/76 (92.11%), Postives = 70/76 (92.11%), Query Frame = 0 

Query: 22 MVQLNNFFFFITSMVVPRGTAAPVLFQWFVSRD-----PSSNGTIIPIPISLFPLLVYLH 81
          MVQLNNFFFFITSMVVPRGTAAPVLFQWFVSRD     PSSNGTIIPIPISLFPLLVYLH
Sbjct: 1  MVQLNNFFFFITSMVVPRGTAAPVLFQWFVSRDVPTGAPSSNGTIIPIPISLFPLLVYLH 60

Query: 82 SRKFIRSMDGAKSAVL 93
          SRKFIRSMDGAKS VL
Sbjct: 61 SRKFIRSMDGAKSGVL 76

[Close]
BLAST of CsGy6G001630 vs. NCBI nr
Match: XP_015584111.1 (uncharacterized protein LOC107262518 [Ricinus communis])

HSP 1 Score: 130.6 bits (327), Expect = 4.3e-27
Identity = 67/79 (84.81%), Postives = 71/79 (89.87%), Query Frame = 0 

Query: 21  RMVQLNNFFFFITSMVVPRGTAAPVLFQWFVSRD-----PSSNGTIIPIPISLFPLLVYL 80
           +MVQL+NFFFFITSMVVPRGTAAPVL +WFVSRD     PSSNGTIIPIPIS FPLLVYL
Sbjct: 76  QMVQLHNFFFFITSMVVPRGTAAPVLLKWFVSRDVPIGAPSSNGTIIPIPISSFPLLVYL 135

Query: 81  HSRKFIRSMDGAKSAVLYA 95
           HSRKFIRSMDGAKS VL+A
Sbjct: 136 HSRKFIRSMDGAKSGVLHA 154

[Close]
BLAST of CsGy6G001630 vs. NCBI nr
Match: YP_009173853.1 (cytochrome c maturase subunit Fc (mitochondrion) [Populus tremula] >YP_009178750.1 cytochrome c biogenesis protein Fc (mitochondrion) [Populus tremula x Populus alba] >YP_009389207.1 cytochrome c maturase subunit Fc (mitochondrion) [Populus davidiana] >ALH07294.1 cytochrome c maturase subunit Fc (mitochondrion) [Populus tremula] >ALJ49751.1 cytochrome c biogenesis protein Fc (mitochondrion) [Populus tremula x Populus alba] >ARX79214.1 cytochrome c maturase subunit Fc (mitochondrion) [Populus davidiana])

HSP 1 Score: 128.3 bits (321), Expect = 2.1e-26
Identity = 66/76 (86.84%), Postives = 68/76 (89.47%), Query Frame = 0 

Query: 22 MVQLNNFFFFITSMVVPRGTAAPVLFQWFVSRD-----PSSNGTIIPIPISLFPLLVYLH 81
          MVQL+NFFFFITSMVVPRGTAAPVL +WF SRD     PSSNGTIIPIPISLFPLLVYLH
Sbjct: 1  MVQLHNFFFFITSMVVPRGTAAPVLLKWFFSRDVPIGAPSSNGTIIPIPISLFPLLVYLH 60

Query: 82 SRKFIRSMDGAKSAVL 93
          SRKFIRSMDGAKS VL
Sbjct: 61 SRKFIRSMDGAKSGVL 76

[Close]
BLAST of CsGy6G001630 vs. NCBI nr
Match: YP_009230357.1 (cytochrome c maturase subunit Fc (mitochondrion) [Salix suchowensis] >AMF83877.1 cytochrome c maturase subunit Fc (mitochondrion) [Salix suchowensis])

HSP 1 Score: 127.9 bits (320), Expect = 2.8e-26
Identity = 65/76 (85.53%), Postives = 68/76 (89.47%), Query Frame = 0 

Query: 22 MVQLNNFFFFITSMVVPRGTAAPVLFQWFVSRD-----PSSNGTIIPIPISLFPLLVYLH 81
          MVQL+NFFFFITSMVVPRGTAAPVL +WF SRD     PSSNGTIIPIPISLFPLL+YLH
Sbjct: 1  MVQLHNFFFFITSMVVPRGTAAPVLLKWFFSRDVPIGAPSSNGTIIPIPISLFPLLIYLH 60

Query: 82 SRKFIRSMDGAKSAVL 93
          SRKFIRSMDGAKS VL
Sbjct: 61 SRKFIRSMDGAKSGVL 76

[Close]
BLAST of CsGy6G001630 vs. TAIR10
Match: AT2G07815.1 (BEST Arabidopsis thaliana protein match is: cytochrome C biogenesis 452 (TAIR:ATMG00180.1))

HSP 1 Score: 118.2 bits (295), Expect = 4.0e-27
Identity = 62/79 (78.48%), Postives = 66/79 (83.54%), Query Frame = 0 

Query: 21  RMVQLNNFFFFITSMVVPRGTAAPVLFQWFVSRD-----PSSNGTIIPIPISLFPLLVYL 80
           +MVQL+NFFFFI  MVVP GTAAPVL +WFVSRD     P SNGTIIPIPIS FPLLVYL
Sbjct: 172 QMVQLHNFFFFIIFMVVPCGTAAPVLLKWFVSRDVPTGAPFSNGTIIPIPISSFPLLVYL 231

Query: 81  HSRKFIRSMDGAKSAVLYA 95
           HSRK IRSMDGAKS VL+A
Sbjct: 232 HSRKIIRSMDGAKSGVLHA 250

[Close]
BLAST of CsGy6G001630 vs. TAIR10
Match: ATMG00180.1 (cytochrome C biogenesis 452)

HSP 1 Score: 115.5 bits (288), Expect = 2.6e-26
Identity = 61/76 (80.26%), Postives = 63/76 (82.89%), Query Frame = 0 

Query: 22 MVQLNNFFFFITSMVVPRGTAAPVLFQWFVSRD-----PSSNGTIIPIPISLFPLLVYLH 81
          MVQL+NFFFFI  MVVP GTAAPVL +WFVSRD     P SNGTIIPIPIS FPLLVYLH
Sbjct: 1  MVQLHNFFFFIIFMVVPCGTAAPVLLKWFVSRDVPTGAPFSNGTIIPIPISSFPLLVYLH 60

Query: 82 SRKFIRSMDGAKSAVL 93
          SRK IRSMDGAKS VL
Sbjct: 61 SRKIIRSMDGAKSGVL 76

[Close]
BLAST of CsGy6G001630 vs. Swiss-Prot
Match: sp|P93286|CCMFC_ARATH (Cytochrome c biogenesis CcmF C-terminal-like mitochondrial protein OS=Arabidopsis thaliana OX=3702 GN=CCMFC PE=1 SV=2)

HSP 1 Score: 104.8 bits (260), Expect = 8.3e-22
Identity = 58/76 (76.32%), Postives = 60/76 (78.95%), Query Frame = 0 

Query: 22 MVQLNNFFFFITSMVVPRGTAAPVLFQWFVSRD-----PSSNGTIIPIPISLFPLLVYLH 81
          MVQL+NFFFFI  MVV  GTAAPVL +WFVSRD     P  NGTIIPI ISLF LLVYLH
Sbjct: 1  MVQLHNFFFFIIFMVVLCGTAAPVLLKWFVSRDVSTGAPFFNGTIIPILISLFSLLVYLH 60

Query: 82 SRKFIRSMDGAKSAVL 93
          SRK IRSMDGAKS VL
Sbjct: 61 SRKIIRSMDGAKSGVL 76

[Close]
BLAST of CsGy6G001630 vs. Swiss-Prot
Match: sp|P38452|YMF03_MARPO (Uncharacterized mitochondrial protein ymf3 OS=Marchantia polymorpha OX=3197 GN=YMF3 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 3.6e-17
Identity = 53/100 (53.00%), Postives = 66/100 (66.00%), Query Frame = 0 

Query: 22  MVQLNNFFFFITSMVVPRGTAAPVLFQWFVSRD-----PSSNGTIIPIPISLFPLLVYLH 81
           MVQL NFFFF+  +VV  GTAAP+LFQW VSRD     P  NGTIIPI  SL  +LVY+H
Sbjct: 1   MVQLQNFFFFLIFLVVLCGTAAPILFQWLVSRDVSTGAPFFNGTIIPIFTSLLLVLVYIH 60

Query: 82  SRKFIRSMDGAKSAVLYATR---MCRSKESTSPVELLFIT 114
           SR F+RS+D AK  VL   R   +    E +SP ++ +I+
Sbjct: 61  SRGFMRSLDEAKRIVLIRARPILLPNIIEKSSPKKIQYIS 100

[Close]
BLAST of CsGy6G001630 vs. TrEMBL
Match: tr|G3EIX3|G3EIX3_CUCSA (Cytochrome c biogenesis FC OS=Cucumis sativus OX=3659 GN=ccmFc PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.3e-29
Identity = 71/76 (93.42%), Postives = 71/76 (93.42%), Query Frame = 0 

Query: 22 MVQLNNFFFFITSMVVPRGTAAPVLFQWFVSRD-----PSSNGTIIPIPISLFPLLVYLH 81
          MVQLNNFFFFITSMVVPRGTAAPVLFQWFVSRD     PSSNGTIIPIPISLFPLLVYLH
Sbjct: 1  MVQLNNFFFFITSMVVPRGTAAPVLFQWFVSRDVPTGAPSSNGTIIPIPISLFPLLVYLH 60

Query: 82 SRKFIRSMDGAKSAVL 93
          SRKFIRSMDGAKSAVL
Sbjct: 61 SRKFIRSMDGAKSAVL 76

[Close]
BLAST of CsGy6G001630 vs. TrEMBL
Match: tr|G3EU31|G3EU31_CUCME (Cytochrome c biogenesis FC OS=Cucumis melo subsp. melo OX=412675 GN=ccmFc PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 6.8e-29
Identity = 70/76 (92.11%), Postives = 70/76 (92.11%), Query Frame = 0 

Query: 22 MVQLNNFFFFITSMVVPRGTAAPVLFQWFVSRD-----PSSNGTIIPIPISLFPLLVYLH 81
          MVQLNNFFFFITSMVVPRGTAAPVLFQWFVSRD     PSSNGTIIPIPISLFPLLVYLH
Sbjct: 1  MVQLNNFFFFITSMVVPRGTAAPVLFQWFVSRDVPTGAPSSNGTIIPIPISLFPLLVYLH 60

Query: 82 SRKFIRSMDGAKSAVL 93
          SRKFIRSMDGAKS VL
Sbjct: 61 SRKFIRSMDGAKSGVL 76

[Close]
BLAST of CsGy6G001630 vs. TrEMBL
Match: tr|A0A0N9PWD1|A0A0N9PWD1_POPTN (Cytochrome c maturase subunit Fc OS=Populus tremula OX=113636 GN=ccmFc PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.4e-26
Identity = 66/76 (86.84%), Postives = 68/76 (89.47%), Query Frame = 0 

Query: 22 MVQLNNFFFFITSMVVPRGTAAPVLFQWFVSRD-----PSSNGTIIPIPISLFPLLVYLH 81
          MVQL+NFFFFITSMVVPRGTAAPVL +WF SRD     PSSNGTIIPIPISLFPLLVYLH
Sbjct: 1  MVQLHNFFFFITSMVVPRGTAAPVLLKWFFSRDVPIGAPSSNGTIIPIPISLFPLLVYLH 60

Query: 82 SRKFIRSMDGAKSAVL 93
          SRKFIRSMDGAKS VL
Sbjct: 61 SRKFIRSMDGAKSGVL 76

[Close]
BLAST of CsGy6G001630 vs. TrEMBL
Match: tr|A0A0P0FHS7|A0A0P0FHS7_POPCN (Cytochrome c biogenesis protein Fc OS=Populus canescens OX=80863 GN=ccmFc PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.4e-26
Identity = 66/76 (86.84%), Postives = 68/76 (89.47%), Query Frame = 0 

Query: 22 MVQLNNFFFFITSMVVPRGTAAPVLFQWFVSRD-----PSSNGTIIPIPISLFPLLVYLH 81
          MVQL+NFFFFITSMVVPRGTAAPVL +WF SRD     PSSNGTIIPIPISLFPLLVYLH
Sbjct: 1  MVQLHNFFFFITSMVVPRGTAAPVLLKWFFSRDVPIGAPSSNGTIIPIPISLFPLLVYLH 60

Query: 82 SRKFIRSMDGAKSAVL 93
          SRKFIRSMDGAKS VL
Sbjct: 61 SRKFIRSMDGAKSGVL 76

[Close]
BLAST of CsGy6G001630 vs. TrEMBL
Match: tr|B9T9M2|B9T9M2_RICCO (Uncharacterized protein (Fragment) OS=Ricinus communis OX=3988 GN=RCOM_2108170 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.8e-26
Identity = 66/76 (86.84%), Postives = 68/76 (89.47%), Query Frame = 0 

Query: 22 MVQLNNFFFFITSMVVPRGTAAPVLFQWFVSRD-----PSSNGTIIPIPISLFPLLVYLH 81
          MVQL+NFFFFITSMVVPRGTAAPVL +WFVSRD     PSSNGTIIPIPIS FPLLVYLH
Sbjct: 1  MVQLHNFFFFITSMVVPRGTAAPVLLKWFVSRDVPIGAPSSNGTIIPIPISSFPLLVYLH 60

Query: 82 SRKFIRSMDGAKSAVL 93
          SRKFIRSMDGAKS VL
Sbjct: 61 SRKFIRSMDGAKSGVL 76

The following BLAST results are available for this feature:
BLAST of CsGy6G001630 vs. NCBI nr
Match NameE-valueIdentityDescription
YP_004849321.13.5e-2993.42cytochrome c biogenesis FC (mitochondrion) [Cucumis sativus] >ADZ10748.1 cytochr... [more]
AEN56115.11.0e-2892.11cytochrome c biogenesis FC (mitochondrion) [Cucumis melo subsp. melo][more]
XP_015584111.14.3e-2784.81uncharacterized protein LOC107262518 [Ricinus communis][more]
YP_009173853.12.1e-2686.84cytochrome c maturase subunit Fc (mitochondrion) [Populus tremula] >YP_009178750... [more]
YP_009230357.12.8e-2685.53cytochrome c maturase subunit Fc (mitochondrion) [Salix suchowensis] >AMF83877.1... [more]
BLAST of CsGy6G001630 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G07815.14.0e-2778.48BEST Arabidopsis thaliana protein match is: cytochrome C biogenesis 452 (TAIR:AT... [more]
ATMG00180.12.6e-2680.26cytochrome C biogenesis 452[more]
BLAST of CsGy6G001630 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P93286|CCMFC_ARATH8.3e-2276.32Cytochrome c biogenesis CcmF C-terminal-like mitochondrial protein OS=Arabidopsi... [more]
sp|P38452|YMF03_MARPO3.6e-1753.00Uncharacterized mitochondrial protein ymf3 OS=Marchantia polymorpha OX=3197 GN=Y... [more]
BLAST of CsGy6G001630 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|G3EIX3|G3EIX3_CUCSA2.3e-2993.42Cytochrome c biogenesis FC OS=Cucumis sativus OX=3659 GN=ccmFc PE=4 SV=1[more]
tr|G3EU31|G3EU31_CUCME6.8e-2992.11Cytochrome c biogenesis FC OS=Cucumis melo subsp. melo OX=412675 GN=ccmFc PE=4 S... [more]
tr|A0A0N9PWD1|A0A0N9PWD1_POPTN1.4e-2686.84Cytochrome c maturase subunit Fc OS=Populus tremula OX=113636 GN=ccmFc PE=4 SV=1[more]
tr|A0A0P0FHS7|A0A0P0FHS7_POPCN1.4e-2686.84Cytochrome c biogenesis protein Fc OS=Populus canescens OX=80863 GN=ccmFc PE=4 S... [more]
tr|B9T9M2|B9T9M2_RICCO1.8e-2686.84Uncharacterized protein (Fragment) OS=Ricinus communis OX=3988 GN=RCOM_2108170 P... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005739 mitochondrion
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G001630.1CsGy6G001630.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36010FAMILY NOT NAMEDcoord: 22..96

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy6G001630Cucumber (Gy14) v2cgybcgybB108
CsGy6G001630Cucumber (Gy14) v2cgybcgybB130
CsGy6G001630Cucumber (Gy14) v2cgybcgybB143
CsGy6G001630Cucurbita maxima (Rimu)cgybcmaB737
CsGy6G001630Cucurbita maxima (Rimu)cgybcmaB741
CsGy6G001630Cucurbita maxima (Rimu)cgybcmaB832
CsGy6G001630Cucurbita maxima (Rimu)cgybcmaB836
CsGy6G001630Cucurbita maxima (Rimu)cgybcmaB840
CsGy6G001630Cucurbita maxima (Rimu)cgybcmaB842
CsGy6G001630Cucurbita maxima (Rimu)cgybcmaB859
CsGy6G001630Cucurbita maxima (Rimu)cgybcmaB860
CsGy6G001630Cucurbita moschata (Rifu)cgybcmoB718
CsGy6G001630Cucurbita moschata (Rifu)cgybcmoB722
CsGy6G001630Cucurbita moschata (Rifu)cgybcmoB812
CsGy6G001630Cucurbita moschata (Rifu)cgybcmoB816
CsGy6G001630Cucurbita moschata (Rifu)cgybcmoB820
CsGy6G001630Cucurbita moschata (Rifu)cgybcmoB823
CsGy6G001630Cucurbita moschata (Rifu)cgybcmoB841
CsGy6G001630Cucurbita moschata (Rifu)cgybcmoB842
CsGy6G001630Cucurbita pepo (Zucchini)cgybcpeB711
CsGy6G001630Cucurbita pepo (Zucchini)cgybcpeB741
CsGy6G001630Cucurbita pepo (Zucchini)cgybcpeB798
CsGy6G001630Cucurbita pepo (Zucchini)cgybcpeB803
CsGy6G001630Cucurbita pepo (Zucchini)cgybcpeB806
CsGy6G001630Cucurbita pepo (Zucchini)cgybcpeB812
CsGy6G001630Cucurbita pepo (Zucchini)cgybcpeB835
CsGy6G001630Cucurbita pepo (Zucchini)cgybcpeB886
CsGy6G001630Cucumber (Chinese Long) v2cgybcuB241
CsGy6G001630Cucumber (Chinese Long) v2cgybcuB264
CsGy6G001630Cucumber (Chinese Long) v2cgybcuB270
CsGy6G001630Cucumber (Chinese Long) v2cgybcuB276
CsGy6G001630Cucumber (Chinese Long) v2cgybcuB282
CsGy6G001630Bottle gourd (USVL1VR-Ls)cgyblsiB396
CsGy6G001630Bottle gourd (USVL1VR-Ls)cgyblsiB408
CsGy6G001630Bottle gourd (USVL1VR-Ls)cgyblsiB409
CsGy6G001630Bottle gourd (USVL1VR-Ls)cgyblsiB418
CsGy6G001630Melon (DHL92) v3.5.1cgybmeB398
CsGy6G001630Melon (DHL92) v3.5.1cgybmeB407
CsGy6G001630Melon (DHL92) v3.5.1cgybmeB422
CsGy6G001630Melon (DHL92) v3.6.1cgybmedB406
CsGy6G001630Melon (DHL92) v3.6.1cgybmedB418
CsGy6G001630Watermelon (Charleston Gray)cgybwcgB391
CsGy6G001630Watermelon (Charleston Gray)cgybwcgB397
CsGy6G001630Watermelon (Charleston Gray)cgybwcgB429
CsGy6G001630Watermelon (Charleston Gray)cgybwcgB449
CsGy6G001630Watermelon (97103) v1cgybwmB421
CsGy6G001630Watermelon (97103) v1cgybwmB452
CsGy6G001630Watermelon (97103) v1cgybwmB456
CsGy6G001630Watermelon (97103) v1cgybwmB476
CsGy6G001630Watermelon (97103) v1cgybwmB497
CsGy6G001630Wild cucumber (PI 183967)cgybcpiB277
CsGy6G001630Wild cucumber (PI 183967)cgybcpiB271
CsGy6G001630Wild cucumber (PI 183967)cgybcpiB283
CsGy6G001630Wild cucumber (PI 183967)cgybcpiB288
CsGy6G001630Silver-seed gourdcarcgybB0023
CsGy6G001630Silver-seed gourdcarcgybB0175
CsGy6G001630Silver-seed gourdcarcgybB0284
CsGy6G001630Silver-seed gourdcarcgybB0562
CsGy6G001630Silver-seed gourdcarcgybB0586
CsGy6G001630Silver-seed gourdcarcgybB0673
CsGy6G001630Silver-seed gourdcarcgybB0988
CsGy6G001630Cucumber (Chinese Long) v3cgybcucB249
CsGy6G001630Cucumber (Chinese Long) v3cgybcucB275
CsGy6G001630Cucumber (Chinese Long) v3cgybcucB283
CsGy6G001630Cucumber (Chinese Long) v3cgybcucB291
CsGy6G001630Cucumber (Chinese Long) v3cgybcucB298
CsGy6G001630Watermelon (97103) v2cgybwmbB397
CsGy6G001630Watermelon (97103) v2cgybwmbB403
CsGy6G001630Watermelon (97103) v2cgybwmbB435
CsGy6G001630Watermelon (97103) v2cgybwmbB457
CsGy6G001630Wax gourdcgybwgoB505
CsGy6G001630Wax gourdcgybwgoB558
CsGy6G001630Wax gourdcgybwgoB597
CsGy6G001630Wax gourdcgybwgoB612