CsGy6G001310 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGAAAAAGCACCGATACGCTACTGCTTCGTAAACAAAAGAATCGACCGAAAGTTTCTTTCGCTTTCCATTAGGACCGCTTTTGTCGAAAACCCTATAGAAACTAAGAAAGATGAAATTTTGCTCAAACAGCCCGTGATTGTGAGTGGAGATAAACCTACACATCGGTTCACCGGACCTAATATCACCACCAATACAGTTGCGCCACGTTGTTAAGGTTCGTTAACCGAAAAAGAAAAAGAGTCAATGGAAAAGAACATTCCTCATTGGGAGTCCAAGATCTCCTCCCAATTTCCAATTTTCTTCTTTTCTAATTCTTTCTAACAAACCCATTTCTGGGTTTCACTTTTCAGATTCAACTCTTAGCCAAACTGCCGAGTGCTAAGCCATTGAACCCATCTTTCTTTATCTTCCCTTGTTTAGAAGCTTCAGGTTTAGAAGGAGAGCAGGCTGAGATGTTTGGGAGTCCTGGAAGAATGAGCGGGCTGGTGCTCAGATGTGCGCAATGGCTCTTTGCTGCTGTGTCTATTGGGTTTATGGTCACTGCTCCTGGCTTCTTCAACTCCACTGCATTCTGGTAATGATGCTTAACCCTTTTCCCATCTGTACCCTTCCTTTTGTTTGATTGAGAAATGTGGACCAGATGCTTGTTCTTGATTGGACCCCTTGTATTGTGGGTGTTTCTGAAAATAGAAATTCAATTCAATAGCGGAAAAAAACGAAAATATTGGATTATTGATTGTTGGGTATAAGAATATTGTATTTAATAACGTCTTTTTCAAATGATTTTGAACTTCGACCCTTTTGTTGTTCTTACTATTACTTGTTAGTTGTTTGTTAATAACAAAGTATCTTGCATTATGTTAGTTTAACTGCTTCATTCTCTATGACCTTAGGAGATTTTAGTTTGGTGCCATTACATTCCTGAAAACTAGATCGATCGTTAATGTCTTTGATCTTAGTCTTAGAGTCCATTCTAGCCTTCATTTTTATACAGGCTACTAGTTGTTTGCATTTAAGTTGCCTTTTTGTTTTGTCATAATGTTTGGGCACCCTGGTTCTGTGATTTGGGAAGAATAATGCAGATACCGGCGGTCTCTGTTTTTTGCTGAAATTTCAAAAATAGTTGTTTGCATCCTGTACTCCATAGTGGATTCCCCCCAAACCCTTCTTTTTCATGTGAACCAACATTTCATTTATGTTCAGGGATGTGTGGTAGTTTGCAACATGGAATACTTGAGAACTTTTCTAGGGTTGAAATCTGCATATATGATTTTGAACTCTCCGCTTTAGATGTTAATTAAACTATCTCCTCTGATTTTTACCTTAGGTTTTCATGGTTTTATGCTAAGAAGCACAAATATAAATACAAGACATGGATATGACACGACACAACGAATGACCCACCGTTTCATTTTACTTAATTGGAATCCCTTCCTTTAGTTAGTGTTTTGGTGGGCTTGTTTTATGTATGCCCTTGTATTCTTTCATTTTTCCTCCATAACATAGTTGTTTTTATTAATTTTTTTAAAAAAATGTATATGATTCTTCTACAAGTTAATGGGTTGATGCATTTACATGCTTAAACAACTTAGTTTGATGTTCACACTCAAATTTTATTATTATTGTCATGTATGCATAGTCTAATCAATAAGTGTTTTATGCATGTGTAACACATTTGTTACACTAACAAGTAGCTGACATGTGTTCAACAAGTGCCAGAGTGTCTAACATGTGTCAGATGTGGACACGCTAGCCAAATAAAGTGTCATGACTCTTAGGTTTTATGTGTTAGCTTTAACCACTCTTATATGTAGTTCTACTGCGAAGTGAGTTCTTGTCTAATTTTGGGTCTATTTATTTCAATCAGTTATTTAATCGCTTCGATGGGGCTTCAAATTCTTTGGAGCTTTGGACTAGCATGCCTTGATTTGCATGCTTTGCGTATGAAGAAAAGCCTGCGGAATTCAGTTCTATTGTGTCTATTTGCCATTGGAGATTGGGTGAGCCACCTCTGTTCTTGAACTTACGAAATACACGAATATGTTAGGACACCTTCTAACAGAAACAATCTAAGAACAAACAAGAACATTGAAAGATAGAATTATATGAAAATATATGGACAATATATTATAACATCAGAAGAACAAGTAACGTGGTAAACTCTTAGGTTTTCGAGAGGGCTAGACTCTCCCAAATTTTCTCACAAGGAAATCTAACAAAATTCTGCAACTCTTTCTCTCAACTCATTCCCTCTATTTATAACAAAAAAGTCCCAACAAACTTACTAGCTAATTACTAACATGCCGCTTCTAATAACTACACTAATATTTTACTATAACCTCATGTATCTCTAATTAGGTCCCTTACAGAATATCAAAATAGAATGTACTTAAAGTAGTGAGTGCTAATCGTATTTTATATTTCTAATTTTGTAAAGTACTTGCCATTTGCCTTGATTAAGCATTTGTTGTACTGTGGTGAAGCATAGTTTAGCAGCAGTTTTATGTTAGGCCTCCGATATTGCTGAAGTGTTCACGTAAGGGCAAAAAGGGAATGCCCTTTGTCTATAGAAATAGAAAAGTAGTCAAGAGTAGTCGAGGGAACGAACTCTTTTTAATCAGTTGGGGGGGGGGGGGGGGTAAAGCCTTTTGGCTCTGTTTTGGTAATTGAATATCAAATACCAGTAAGTGAATATCTTACAATTTTACCTTATGAATCCACTAGTAATTCATCTACTTGAAATGAAATGCAGGTCGTATCAACGCTTTCACTTGCAGCTGCATCGTCCTCTGCTGGGGTGGCCATTCTGTATTCAAGGGACTTGGACTACTGCAGATCACCTCCTTATATTTCTTGTAGCAAGATCGAAATATCTGTGGCATTTGCTTTTATTTCCTGGTTCCTACTTGGTTTATCATCGTTAGTAACATTTTGGCTATTGGGTACAGTATAA ATGGAAGAAAAAGCACCGATACGCTACTGCTTCGTAAACAAAAGAATCGACCGAAAGTTTCTTTCGCTTTCCATTAGGACCGCTTTTGTCGAAAACCCTATAGAAACTAAGAAAGATGAAATTTTGCTCAAACAGCCCGTGATTGTGAGTGGAGATAAACCTACACATCGGTTCACCGGACCTAATATCACCACCAATACAATTCAACTCTTAGCCAAACTGCCGAGTGCTAAGCCATTGAACCCATCTTTCTTTATCTTCCCTTGTTTAGAAGCTTCAGGTTTAGAAGGAGAGCAGGCTGAGATGTTTGGGAGTCCTGGAAGAATGAGCGGGCTGGTGCTCAGATGTGCGCAATGGCTCTTTGCTGCTGTGTCTATTGGGTTTATGGTCACTGCTCCTGGCTTCTTCAACTCCACTGCATTCTGTTATTTAATCGCTTCGATGGGGCTTCAAATTCTTTGGAGCTTTGGACTAGCATGCCTTGATTTGCATGCTTTGCGTATGAAGAAAAGCCTGCGGAATTCAGTCGTATCAACGCTTTCACTTGCAGCTGCATCGTCCTCTGCTGGGGTGGCCATTCTGTATTCAAGGGACTTGGACTACTGCAGATCACCTCCTTATATTTCTTGTAGCAAGATCGAAATATCTGTGGCATTTGCTTTTATTTCCTGGTTCCTACTTGGTTTATCATCGTTAGTAACATTTTGGCTATTGGGTACAGTATAA ATGGAAGAAAAAGCACCGATACGCTACTGCTTCGTAAACAAAAGAATCGACCGAAAGTTTCTTTCGCTTTCCATTAGGACCGCTTTTGTCGAAAACCCTATAGAAACTAAGAAAGATGAAATTTTGCTCAAACAGCCCGTGATTGTGAGTGGAGATAAACCTACACATCGGTTCACCGGACCTAATATCACCACCAATACAATTCAACTCTTAGCCAAACTGCCGAGTGCTAAGCCATTGAACCCATCTTTCTTTATCTTCCCTTGTTTAGAAGCTTCAGGTTTAGAAGGAGAGCAGGCTGAGATGTTTGGGAGTCCTGGAAGAATGAGCGGGCTGGTGCTCAGATGTGCGCAATGGCTCTTTGCTGCTGTGTCTATTGGGTTTATGGTCACTGCTCCTGGCTTCTTCAACTCCACTGCATTCTGTTATTTAATCGCTTCGATGGGGCTTCAAATTCTTTGGAGCTTTGGACTAGCATGCCTTGATTTGCATGCTTTGCGTATGAAGAAAAGCCTGCGGAATTCAGTCGTATCAACGCTTTCACTTGCAGCTGCATCGTCCTCTGCTGGGGTGGCCATTCTGTATTCAAGGGACTTGGACTACTGCAGATCACCTCCTTATATTTCTTGTAGCAAGATCGAAATATCTGTGGCATTTGCTTTTATTTCCTGGTTCCTACTTGGTTTATCATCGTTAGTAACATTTTGGCTATTGGGTACAGTATAA MEEKAPIRYCFVNKRIDRKFLSLSIRTAFVENPIETKKDEILLKQPVIVSGDKPTHRFTGPNITTNTIQLLAKLPSAKPLNPSFFIFPCLEASGLEGEQAEMFGSPGRMSGLVLRCAQWLFAAVSIGFMVTAPGFFNSTAFCYLIASMGLQILWSFGLACLDLHALRMKKSLRNSVVSTLSLAAASSSAGVAILYSRDLDYCRSPPYISCSKIEISVAFAFISWFLLGLSSLVTFWLLGTV
BLAST of CsGy6G001310 vs. NCBI nr
Match: KGN45745.1 (hypothetical protein Csa_6G008760 [Cucumis sativus]) HSP 1 Score: 329.3 bits (843), Expect = 1.1e-86 Identity = 174/185 (94.05%), Postives = 174/185 (94.05%), Query Frame = 0
BLAST of CsGy6G001310 vs. NCBI nr
Match: XP_004138452.1 (PREDICTED: CASP-like protein 5B1 [Cucumis sativus] >XP_011656393.1 PREDICTED: CASP-like protein 5B1 [Cucumis sativus]) HSP 1 Score: 261.9 bits (668), Expect = 2.1e-66 Identity = 140/151 (92.72%), Postives = 140/151 (92.72%), Query Frame = 0
BLAST of CsGy6G001310 vs. NCBI nr
Match: XP_008441396.1 (PREDICTED: CASP-like protein 5B1 [Cucumis melo]) HSP 1 Score: 258.5 bits (659), Expect = 2.3e-65 Identity = 139/151 (92.05%), Postives = 139/151 (92.05%), Query Frame = 0
BLAST of CsGy6G001310 vs. NCBI nr
Match: XP_022134393.1 (CASP-like protein 5B1 [Momordica charantia]) HSP 1 Score: 240.0 bits (611), Expect = 8.6e-60 Identity = 126/151 (83.44%), Postives = 133/151 (88.08%), Query Frame = 0
BLAST of CsGy6G001310 vs. NCBI nr
Match: XP_022954983.1 (CASP-like protein 5B2 [Cucurbita moschata]) HSP 1 Score: 238.8 bits (608), Expect = 1.9e-59 Identity = 128/151 (84.77%), Postives = 132/151 (87.42%), Query Frame = 0
BLAST of CsGy6G001310 vs. TAIR10
Match: AT5G02060.1 (Uncharacterised protein family (UPF0497)) HSP 1 Score: 146.7 bits (369), Expect = 1.8e-35 Identity = 76/149 (51.01%), Postives = 103/149 (69.13%), Query Frame = 0
BLAST of CsGy6G001310 vs. TAIR10
Match: AT3G53850.1 (Uncharacterised protein family (UPF0497)) HSP 1 Score: 142.9 bits (359), Expect = 2.6e-34 Identity = 78/152 (51.32%), Postives = 102/152 (67.11%), Query Frame = 0
BLAST of CsGy6G001310 vs. TAIR10
Match: AT3G23200.1 (Uncharacterised protein family (UPF0497)) HSP 1 Score: 134.0 bits (336), Expect = 1.2e-31 Identity = 78/148 (52.70%), Postives = 100/148 (67.57%), Query Frame = 0
BLAST of CsGy6G001310 vs. TAIR10
Match: AT2G28370.1 (Uncharacterised protein family (UPF0497)) HSP 1 Score: 105.1 bits (261), Expect = 6.0e-23 Identity = 65/151 (43.05%), Postives = 88/151 (58.28%), Query Frame = 0
BLAST of CsGy6G001310 vs. TAIR10
Match: AT2G37200.1 (Uncharacterised protein family (UPF0497)) HSP 1 Score: 99.0 bits (245), Expect = 4.3e-21 Identity = 61/148 (41.22%), Postives = 88/148 (59.46%), Query Frame = 0
BLAST of CsGy6G001310 vs. Swiss-Prot
Match: sp|Q9LZM5|CSPLU_ARATH (CASP-like protein 5B1 OS=Arabidopsis thaliana OX=3702 GN=At5g02060 PE=2 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 3.2e-34 Identity = 76/149 (51.01%), Postives = 103/149 (69.13%), Query Frame = 0
BLAST of CsGy6G001310 vs. Swiss-Prot
Match: sp|Q945M8|CSPLI_ARATH (CASP-like protein 5B2 OS=Arabidopsis thaliana OX=3702 GN=At3g53850 PE=2 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 4.7e-33 Identity = 78/152 (51.32%), Postives = 102/152 (67.11%), Query Frame = 0
BLAST of CsGy6G001310 vs. Swiss-Prot
Match: sp|B8BD96|CSPLQ_ORYSI (CASP-like protein 5B3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_30532 PE=3 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 6.1e-33 Identity = 76/152 (50.00%), Postives = 104/152 (68.42%), Query Frame = 0
BLAST of CsGy6G001310 vs. Swiss-Prot
Match: sp|Q6K478|CSPLQ_ORYSJ (CASP-like protein 5B3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0249400 PE=2 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 6.1e-33 Identity = 76/152 (50.00%), Postives = 104/152 (68.42%), Query Frame = 0
BLAST of CsGy6G001310 vs. Swiss-Prot
Match: sp|B6T990|CSPLI_MAIZE (CASP-like protein 5B3 OS=Zea mays OX=4577 PE=2 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 1.0e-32 Identity = 76/149 (51.01%), Postives = 101/149 (67.79%), Query Frame = 0
BLAST of CsGy6G001310 vs. TrEMBL
Match: tr|A0A0A0K7M5|A0A0A0K7M5_CUCSA (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G008760 PE=3 SV=1) HSP 1 Score: 329.3 bits (843), Expect = 7.1e-87 Identity = 174/185 (94.05%), Postives = 174/185 (94.05%), Query Frame = 0
BLAST of CsGy6G001310 vs. TrEMBL
Match: tr|A0A1S3B3D0|A0A1S3B3D0_CUCME (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103485526 PE=3 SV=1) HSP 1 Score: 258.5 bits (659), Expect = 1.5e-65 Identity = 139/151 (92.05%), Postives = 139/151 (92.05%), Query Frame = 0
BLAST of CsGy6G001310 vs. TrEMBL
Match: tr|A0A2P5CX86|A0A2P5CX86_9ROSA (CASP-like protein OS=Trema orientalis OX=63057 GN=TorRG33x02_270290 PE=3 SV=1) HSP 1 Score: 199.1 bits (505), Expect = 1.1e-47 Identity = 104/152 (68.42%), Postives = 121/152 (79.61%), Query Frame = 0
BLAST of CsGy6G001310 vs. TrEMBL
Match: tr|A0A2P5ALE1|A0A2P5ALE1_PARAD (CASP-like protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_320860 PE=3 SV=1) HSP 1 Score: 199.1 bits (505), Expect = 1.1e-47 Identity = 104/152 (68.42%), Postives = 121/152 (79.61%), Query Frame = 0
BLAST of CsGy6G001310 vs. TrEMBL
Match: tr|W9RR72|W9RR72_9ROSA (CASP-like protein OS=Morus notabilis OX=981085 GN=L484_009892 PE=3 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 4.2e-47 Identity = 104/152 (68.42%), Postives = 118/152 (77.63%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |