CsGy6G001250 (gene) Cucumber (Gy14) v2

NameCsGy6G001250
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUnknown Protein
LocationChr6 : 872712 .. 874940 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTCTAGCGGTTTCTAGTTATGGTTTCTGTACAACAAATCCTACGCCTCGTAAAATCTGAATTTAATTTTAACAGGGCTATGTTTGTAAAGATCTGGGTGTTGAATTCAATAACAAAGAAATCCAATGTGTTATTGAACATGTTACTTACGTTAAGCTTTATGAATCAGACAAAGACAAACCAAATAATAAGACATGATCAGATGAATGACAAAATTGAACTCATTGGATTGGATATACTGATATTGTTATTGAAAACTTTATACATTTTTAAGTTGATCTGTACGATTCTTGTAGTTCAATAGCTTGCCATCTAATTTGAGTCTCAATCACAGAGCAAGGTCTCTCGGGTTGCATTTCCAGTAGTTGGGTTTACCCTGTAGACAAAAATGAATAAGTATCCTGTTCTATTTATCATGAACCATTTACAGTCAAACCTAATAAACACAAGAATTTGTTTTTACCCATCTGCAACTTTGCAAAGGTATTCCCGCTGATCCTCTCTCAATGGCACGTCAGTGAAGTCTGCCATTATGAGGTAAATTATGCACAAGTATTTCTTCGTACAACCACCCCATTGTTAGTTTTCAGAAAATTATATTCATTGTTAGTTGAATTGCATTTTCCTATTACTCTTTCGTCTAAGAACATTGCTGACAAAAATTAGTTTCAGCTAAATGCCTAAAAGTCAAATTTCTTTTGAAGCATAGAGAGGTTGGAATAATAACCTATGTTAATGCCTCATGGCATCTAAAATAATTATGGATATGAGAGAATCCCCAATGAGATACTAAAAGCACATAAATGTTGGGTTTACAAGAAATATACTATGAAAAAGAGAATCAGATTCTATTTGTGTATCTAAGATCAATCTTGGCCATTCTCGCCTTTCAAATCTCCTAAACTCGACTTTTAGGTCTTATAATGAACTAATAGAAGCTTTCAAATATGTATAGAGTACCTTTGGAAAATATATAAAGTATTAATTGAACGTGGGGGGAGAGAGAGTAAACGGATAAAAAAAAAAAGAGGATCCCCGATGAGATACTAAAAGCAAAATAGATGTTGGGTTTCCATACCAGCGCCGTTTATTGTTGAACCACGGAAAGAGGTATTTCCCGTGGCCAGTGCACCTTCAAGGTTGGCATTGCTTAAATTTGCCTGCTCAAAGCAGAAAAAAACAACCATTCAGTATAAAGTTACAACTTCACTGTTTTCTAACATCAAAGCACAGCGCTTGCATGTAAAACCGCAGATAAAAACTGTAGGTTACTCTGCATCTCAAACTGCATACAAAGTTCGTGGTTGTTGTATCACATGAATACTTTTTGCTAAGTAGTTTCCTATCGTAATTGAGCAAATTTTTTAACATTCAAGACTGAGATTGCAAAATTTGACCTCCAGTCCTAACTAACTTGTTATGTATATAATAATACAATCATTCAAATTTGAAAATCTGAAAAGGGGCAAACTAAAGATTAAACAAAGAAGCATTTAATTGCACACATATCAAACAATCACCACCTTGGTAACATTGGCAAGAGAAAAATCTGCACCTCTGAGATCAGCATCTGAAAGATCCGCCCCTAACAATTAGACAATGGAAGAAATAATAGAAGTCAGCATTAACTGGATAGAAAATCCTGAATTATAAGAGTATGCAGTTGATTAAAATGAGTTAAACCTGTTAAATCAGCATCGAAGAAGCTAGCACCTAATAAGTTGGCACCTTTAAAATTAGCTTGCCGTAAAATAGACTAATACAAAAGAAACAGAAAAATAAAAGCAATGTCACAACCACATATTACTGTAGTACAAGTAGAAACAATAGAAATAATGAAACTTCGGTTGAAACCGTTTTGAAATCTTGCTTGATTAAGGTCTTCCCACTGAAATCTTTCCCAGAGAGATCCTGACCTCTAGTGACCCCAGCTCCGTAAGGACCTCCGCCCTAATAGCCAAAAATCAATCATACAGTAGAGTACAATACAATAGAGAAATGAGAATGAAAATGAGGAAATGAACCTTAAAAGCTAGGGCAGGATCGGCGAGGAACAAAGAGGCAGAAACGAAAGCGAGGAAAGTGGGTTGTCCAAGGGAAAGAACGAAATTCCTTGTAGCTTGAAGTTGTTGGTTGAATACCTTCATATAGTGGGTAAAATGAAAGCATTGGAAGATAAAGGAGAAGAAAATGGGAGTGGGAAGGGAGAAGGGGAGGTTACCTGA

mRNA sequence

ATGGATTCTAGCGCGCCGTTTATTGTTGAACCACGGAAAGAGGTATTTCCCGTGGCCAGTGCACCTTCAAGGTTGGCATTGCTTAAATTTGCCTGCTCAAAGCAGAAAAAAACAACCATTCAGTATAAAGTTACAACTTCACTGTTTTCTAACATCAAAGCACAGCGCTTGCATGTAAAACCGCAGATAAAAACTGTAGGTTACTCTGCATCTCAAACTGCATACAAAGTTCGTGGTCTTCCCACTGAAATCTTTCCCAGAGAGATCCTGACCTCTAGTGACCCCAGCTCCGTAAGGACCTCCGCCCTAATAGCCAAAAATCAATCATACAGTAGAGGCAGGATCGGCGAGGAACAAAGAGGCAGAAACGAAAGCGAGGAAAGTGGGTTGTCCAAGGGAAAGAACGAAATTCCTTGTAGCTTGAAGTTGTTGGTTGAATACCTTCATATAGTGGGTAAAATGAAAGCATTGGAAGATAAAGGAGAAGAAAATGGGAGTGGGAAGGGAGAAGGGGAGGTTACCTGA

Coding sequence (CDS)

ATGGATTCTAGCGCGCCGTTTATTGTTGAACCACGGAAAGAGGTATTTCCCGTGGCCAGTGCACCTTCAAGGTTGGCATTGCTTAAATTTGCCTGCTCAAAGCAGAAAAAAACAACCATTCAGTATAAAGTTACAACTTCACTGTTTTCTAACATCAAAGCACAGCGCTTGCATGTAAAACCGCAGATAAAAACTGTAGGTTACTCTGCATCTCAAACTGCATACAAAGTTCGTGGTCTTCCCACTGAAATCTTTCCCAGAGAGATCCTGACCTCTAGTGACCCCAGCTCCGTAAGGACCTCCGCCCTAATAGCCAAAAATCAATCATACAGTAGAGGCAGGATCGGCGAGGAACAAAGAGGCAGAAACGAAAGCGAGGAAAGTGGGTTGTCCAAGGGAAAGAACGAAATTCCTTGTAGCTTGAAGTTGTTGGTTGAATACCTTCATATAGTGGGTAAAATGAAAGCATTGGAAGATAAAGGAGAAGAAAATGGGAGTGGGAAGGGAGAAGGGGAGGTTACCTGA

Protein sequence

MDSSAPFIVEPRKEVFPVASAPSRLALLKFACSKQKKTTIQYKVTTSLFSNIKAQRLHVKPQIKTVGYSASQTAYKVRGLPTEIFPREILTSSDPSSVRTSALIAKNQSYSRGRIGEEQRGRNESEESGLSKGKNEIPCSLKLLVEYLHIVGKMKALEDKGEENGSGKGEGEVT
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G001250.1CsGy6G001250.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..131
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..133

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy6G001250Watermelon (97103) v2cgybwmbB397
CsGy6G001250Watermelon (97103) v2cgybwmbB403
CsGy6G001250Watermelon (97103) v2cgybwmbB457
CsGy6G001250Wax gourdcgybwgoB558
CsGy6G001250Cucumber (Gy14) v2cgybcgybB108
CsGy6G001250Cucumber (Gy14) v2cgybcgybB130
CsGy6G001250Cucumber (Gy14) v2cgybcgybB143
CsGy6G001250Cucurbita maxima (Rimu)cgybcmaB737
CsGy6G001250Cucurbita maxima (Rimu)cgybcmaB741
CsGy6G001250Cucurbita maxima (Rimu)cgybcmaB832
CsGy6G001250Cucurbita maxima (Rimu)cgybcmaB836
CsGy6G001250Cucurbita maxima (Rimu)cgybcmaB840
CsGy6G001250Cucurbita maxima (Rimu)cgybcmaB842
CsGy6G001250Cucurbita maxima (Rimu)cgybcmaB859
CsGy6G001250Cucurbita maxima (Rimu)cgybcmaB860
CsGy6G001250Cucurbita moschata (Rifu)cgybcmoB718
CsGy6G001250Cucurbita moschata (Rifu)cgybcmoB722
CsGy6G001250Cucurbita moschata (Rifu)cgybcmoB812
CsGy6G001250Cucurbita moschata (Rifu)cgybcmoB816
CsGy6G001250Cucurbita moschata (Rifu)cgybcmoB820
CsGy6G001250Cucurbita moschata (Rifu)cgybcmoB823
CsGy6G001250Cucurbita moschata (Rifu)cgybcmoB841
CsGy6G001250Cucurbita moschata (Rifu)cgybcmoB842
CsGy6G001250Cucurbita pepo (Zucchini)cgybcpeB741
CsGy6G001250Cucurbita pepo (Zucchini)cgybcpeB798
CsGy6G001250Cucurbita pepo (Zucchini)cgybcpeB803
CsGy6G001250Cucurbita pepo (Zucchini)cgybcpeB806
CsGy6G001250Cucurbita pepo (Zucchini)cgybcpeB812
CsGy6G001250Cucurbita pepo (Zucchini)cgybcpeB835
CsGy6G001250Cucumber (Chinese Long) v2cgybcuB264
CsGy6G001250Cucumber (Chinese Long) v2cgybcuB282
CsGy6G001250Bottle gourd (USVL1VR-Ls)cgyblsiB408
CsGy6G001250Bottle gourd (USVL1VR-Ls)cgyblsiB409
CsGy6G001250Bottle gourd (USVL1VR-Ls)cgyblsiB418
CsGy6G001250Melon (DHL92) v3.5.1cgybmeB407
CsGy6G001250Melon (DHL92) v3.5.1cgybmeB422
CsGy6G001250Melon (DHL92) v3.6.1cgybmedB406
CsGy6G001250Melon (DHL92) v3.6.1cgybmedB418
CsGy6G001250Watermelon (Charleston Gray)cgybwcgB391
CsGy6G001250Watermelon (Charleston Gray)cgybwcgB397
CsGy6G001250Watermelon (Charleston Gray)cgybwcgB429
CsGy6G001250Watermelon (Charleston Gray)cgybwcgB449
CsGy6G001250Watermelon (97103) v1cgybwmB421
CsGy6G001250Watermelon (97103) v1cgybwmB476
CsGy6G001250Watermelon (97103) v1cgybwmB497
CsGy6G001250Wild cucumber (PI 183967)cgybcpiB271
CsGy6G001250Wild cucumber (PI 183967)cgybcpiB283
CsGy6G001250Wild cucumber (PI 183967)cgybcpiB288
CsGy6G001250Silver-seed gourdcarcgybB0023
CsGy6G001250Silver-seed gourdcarcgybB0175
CsGy6G001250Silver-seed gourdcarcgybB0284
CsGy6G001250Silver-seed gourdcarcgybB0586
CsGy6G001250Silver-seed gourdcarcgybB0673
CsGy6G001250Cucumber (Chinese Long) v3cgybcucB275
CsGy6G001250Cucumber (Chinese Long) v3cgybcucB291
CsGy6G001250Cucumber (Chinese Long) v3cgybcucB298