CsGy5G028780 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy5G028780
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	UDP-glycosyltransferase 79
Location	Chr5 : 32302276 .. 32302637 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCGACCATCAAGTTCCATTCTCGGTCCTTTACATTGCATTTTGAAGCTTCACAGTTCTAGACAAAACTCAATTCCAGTAAGACATTGTTACAGGCAAACCATTTCTCTGGGTTGTTAGGCAATACATTACTGAAGAAAACCCTAACAATGCCTTCCCATTAGGGTTTCAAGATTGTGTATTCGGCTCCTCAACAAAGGGTTCTTAATCATCCATCAATTGCTTGCTTTGTGAGCCACTGTGGCTGGAATTCGACGCTTGAAAGTCTCAGCATGGTGTTCGGTTCCTGTGTTGGCCATACTTTGGCAACCAGTTTCTTGTTGAGAGCTACATTTGTGATATATGGAATGTGGGGTTGA

mRNA sequence

ATGGCTCGACCATCAAGTTCCATTCTCGGTCCTTTACATTGCATTTTGAAGCTTCACAGTTCTAGACAAAACTCAATTCCAGGTTTCAAGATTGTGTATTCGGCTCCTCAACAAAGGGTTCTTAATCATCCATCAATTGCTTGCTTTGTGAGCCACTGTGGCTGGAATTCGACGCTTGAAAGTCTCAGCATGGTGTTCGGTTCCTGTGTTGGCCATACTTTGGCAACCAGTTTCTTGTTGAGAGCTACATTTGTGATATATGGAATGTGGGGTTGA

Coding sequence (CDS)

ATGGCTCGACCATCAAGTTCCATTCTCGGTCCTTTACATTGCATTTTGAAGCTTCACAGTTCTAGACAAAACTCAATTCCAGGTTTCAAGATTGTGTATTCGGCTCCTCAACAAAGGGTTCTTAATCATCCATCAATTGCTTGCTTTGTGAGCCACTGTGGCTGGAATTCGACGCTTGAAAGTCTCAGCATGGTGTTCGGTTCCTGTGTTGGCCATACTTTGGCAACCAGTTTCTTGTTGAGAGCTACATTTGTGATATATGGAATGTGGGGTTGA

Protein sequence

MARPSSSILGPLHCILKLHSSRQNSIPGFKIVYSAPQQRVLNHPSIACFVSHCGWNSTLESLSMVFGSCVGHTLATSFLLRATFVIYGMWG

Homology

[Close]

BLAST of CsGy5G028780 vs. NCBI nr
Match: XP_006573253.1 (UDP-glycosyltransferase 83A1 [Glycine max])

HSP 1 Score: 71.2 bits (173), Expect = 2.0e-09
Identity = 32/57 (56.14%), Postives = 42/57 (73.68%), Query Frame = 0


Query: 30  KIVYSAPQQRVLNHPSIACFVSHCGWNSTLESLSMVFGSCVGHTLATSFLLRATFVI 87
           KIV  APQQ+VL+HP+IACFV+HCGWNST+E +S       GH L T ++ + TFV+
Sbjct: 333 KIVSWAPQQKVLSHPAIACFVTHCGWNSTIEGVSNGLPLLCGHILETKYVTKRTFVM 389

[Close]

BLAST of CsGy5G028780 vs. NCBI nr
Match: XP_008459382.1 (PREDICTED: UDP-glycosyltransferase 83A1 [Cucumis melo])

HSP 1 Score: 68.9 bits (167), Expect = 9.9e-09
Identity = 32/34 (94.12%), Postives = 32/34 (94.12%), Query Frame = 0


Query: 30  KIVYSAPQQRVLNHPSIACFVSHCGWNSTLESLS 64
           KIV  APQQRVLNHPSIACFVSHCGWNSTLESLS
Sbjct: 332 KIVGWAPQQRVLNHPSIACFVSHCGWNSTLESLS 365

[Close]

BLAST of CsGy5G028780 vs. NCBI nr
Match: XP_022938984.1 (UDP-glycosyltransferase 83A1-like [Cucurbita moschata])

HSP 1 Score: 67.8 bits (164), Expect = 2.2e-08
Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = 0


Query: 30  KIVYSAPQQRVLNHPSIACFVSHCGWNSTLESLS 64
           KIV  APQQRVLNHPSIACF+SHCGWNSTLESLS
Sbjct: 333 KIVGWAPQQRVLNHPSIACFLSHCGWNSTLESLS 366

[Close]

BLAST of CsGy5G028780 vs. NCBI nr
Match: XP_022993600.1 (UDP-glycosyltransferase 83A1 [Cucurbita maxima])

HSP 1 Score: 67.8 bits (164), Expect = 2.2e-08
Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = 0


Query: 30  KIVYSAPQQRVLNHPSIACFVSHCGWNSTLESLS 64
           KIV  APQQRVLNHPSIACF+SHCGWNSTLESLS
Sbjct: 359 KIVGWAPQQRVLNHPSIACFLSHCGWNSTLESLS 392

[Close]

BLAST of CsGy5G028780 vs. NCBI nr
Match: XP_023549624.1 (UDP-glycosyltransferase 83A1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 67.8 bits (164), Expect = 2.2e-08
Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = 0


Query: 30  KIVYSAPQQRVLNHPSIACFVSHCGWNSTLESLS 64
           KIV  APQQRVLNHPSIACF+SHCGWNSTLESLS
Sbjct: 333 KIVGWAPQQRVLNHPSIACFLSHCGWNSTLESLS 366

[Close]

BLAST of CsGy5G028780 vs. TAIR10
Match: AT4G15480.1 (UDP-Glycosyltransferase superfamily protein)

HSP 1 Score: 58.5 bits (140), Expect = 2.4e-09
Identity = 24/33 (72.73%), Postives = 30/33 (90.91%), Query Frame = 0


Query: 31  IVYSAPQQRVLNHPSIACFVSHCGWNSTLESLS 64
           IV   PQ++VL+HPS+ACFV+HCGWNST+ESLS
Sbjct: 352 IVDWCPQEQVLSHPSVACFVTHCGWNSTMESLS 384

[Close]

BLAST of CsGy5G028780 vs. TAIR10
Match: AT4G15490.1 (UDP-Glycosyltransferase superfamily protein)

HSP 1 Score: 58.2 bits (139), Expect = 3.2e-09
Identity = 24/34 (70.59%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 30  KIVYSAPQQRVLNHPSIACFVSHCGWNSTLESLS 64
           KIV   PQ+RVL HP+IACF+SHCGWNST+E+L+
Sbjct: 339 KIVEWCPQERVLAHPAIACFLSHCGWNSTMEALT 372

[Close]

BLAST of CsGy5G028780 vs. TAIR10
Match: AT3G21560.1 (UDP-Glycosyltransferase superfamily protein)

HSP 1 Score: 55.8 bits (133), Expect = 1.6e-08
Identity = 22/34 (64.71%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 30  KIVYSAPQQRVLNHPSIACFVSHCGWNSTLESLS 64
           KIV    Q++VL+HPS+ACFV+HCGWNST+E++S
Sbjct: 345 KIVEWCSQEKVLSHPSVACFVTHCGWNSTMEAVS 378

[Close]

BLAST of CsGy5G028780 vs. TAIR10
Match: AT4G15500.1 (UDP-Glycosyltransferase superfamily protein)

HSP 1 Score: 53.5 bits (127), Expect = 7.8e-08
Identity = 21/34 (61.76%), Postives = 29/34 (85.29%), Query Frame = 0


Query: 30  KIVYSAPQQRVLNHPSIACFVSHCGWNSTLESLS 64
           KIV    Q++VL HP++ACF+SHCGWNST+E+L+
Sbjct: 335 KIVEWCQQEKVLAHPAVACFLSHCGWNSTMEALT 368

[Close]

BLAST of CsGy5G028780 vs. TAIR10
Match: AT1G05675.1 (UDP-Glycosyltransferase superfamily protein)

HSP 1 Score: 51.6 bits (122), Expect = 3.0e-07
Identity = 21/30 (70.00%), Postives = 24/30 (80.00%), Query Frame = 0


Query: 35  APQQRVLNHPSIACFVSHCGWNSTLESLSM 65
           +PQ  VL H SI CFV+HCGWNSTLE LS+
Sbjct: 332 SPQLEVLTHKSIGCFVTHCGWNSTLEGLSL 361

[Close]

BLAST of CsGy5G028780 vs. Swiss-Prot
Match: sp|Q9MB73|LGT_CITUN (Limonoid UDP-glucosyltransferase OS=Citrus unshiu OX=55188 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.6e-08
Identity = 23/34 (67.65%), Postives = 31/34 (91.18%), Query Frame = 0


Query: 30  KIVYSAPQQRVLNHPSIACFVSHCGWNSTLESLS 64
           K+V  +PQ++VL HPS+ACFV+HCGWNST+ESL+
Sbjct: 337 KVVQWSPQEKVLAHPSVACFVTHCGWNSTMESLA 370

[Close]

BLAST of CsGy5G028780 vs. Swiss-Prot
Match: sp|Q5XF20|U84A1_ARATH (UDP-glycosyltransferase 84A1 OS=Arabidopsis thaliana OX=3702 GN=UGT84A1 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 4.4e-08
Identity = 24/33 (72.73%), Postives = 30/33 (90.91%), Query Frame = 0


Query: 31  IVYSAPQQRVLNHPSIACFVSHCGWNSTLESLS 64
           IV   PQ++VL+HPS+ACFV+HCGWNST+ESLS
Sbjct: 352 IVDWCPQEQVLSHPSVACFVTHCGWNSTMESLS 384

[Close]

BLAST of CsGy5G028780 vs. Swiss-Prot
Match: sp|Q66PF4|CGT_FRAAN (Cinnamate beta-D-glucosyltransferase OS=Fragaria ananassa OX=3747 GN=GT2 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 5.7e-08
Identity = 22/34 (64.71%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 30  KIVYSAPQQRVLNHPSIACFVSHCGWNSTLESLS 64
           K+V  +PQ+++L HPS ACFV+HCGWNST+ESL+
Sbjct: 337 KVVQWSPQEKILEHPSTACFVTHCGWNSTMESLT 370

[Close]

BLAST of CsGy5G028780 vs. Swiss-Prot
Match: sp|O23401|U84A3_ARATH (UDP-glycosyltransferase 84A3 OS=Arabidopsis thaliana OX=3702 GN=UGT84A3 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 5.7e-08
Identity = 24/34 (70.59%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 30  KIVYSAPQQRVLNHPSIACFVSHCGWNSTLESLS 64
           KIV   PQ+RVL HP+IACF+SHCGWNST+E+L+
Sbjct: 339 KIVEWCPQERVLAHPAIACFLSHCGWNSTMEALT 372

[Close]

BLAST of CsGy5G028780 vs. Swiss-Prot
Match: sp|V5LLZ9|GGT_QUERO (Gallate 1-beta-glucosyltransferase OS=Quercus robur OX=38942 GN=UGT84A13 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 7.4e-08
Identity = 22/34 (64.71%), Postives = 31/34 (91.18%), Query Frame = 0


Query: 30  KIVYSAPQQRVLNHPSIACFVSHCGWNSTLESLS 64
           ++V  +PQ++VL HPS+ACFV+HCGWNST+ESL+
Sbjct: 336 RVVQWSPQEQVLAHPSVACFVTHCGWNSTMESLT 369

[Close]

BLAST of CsGy5G028780 vs. TrEMBL
Match: tr|A0A1S3CB98|A0A1S3CB98_CUCME (UDP-glycosyltransferase 83A1 OS=Cucumis melo OX=3656 GN=LOC103498530 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 6.5e-09
Identity = 32/34 (94.12%), Postives = 32/34 (94.12%), Query Frame = 0


Query: 30  KIVYSAPQQRVLNHPSIACFVSHCGWNSTLESLS 64
           KIV  APQQRVLNHPSIACFVSHCGWNSTLESLS
Sbjct: 332 KIVGWAPQQRVLNHPSIACFVSHCGWNSTLESLS 365

[Close]

BLAST of CsGy5G028780 vs. TrEMBL
Match: tr|A0A2P5ED73|A0A2P5ED73_9ROSA (UDP-glucuronosyl/UDP-glucosyltransferase OS=Trema orientalis OX=63057 GN=TorRG33x02_207540 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.5e-08
Identity = 31/47 (65.96%), Postives = 38/47 (80.85%), Query Frame = 0


Query: 17  KLHSSRQNSIPGFKIVYSAPQQRVLNHPSIACFVSHCGWNSTLESLS 64
           +L S+++N+    KIV  APQQ+VL HPSIACFVSHCGWNST+E LS
Sbjct: 339 ELQSNKKNNNNIGKIVNWAPQQKVLGHPSIACFVSHCGWNSTIEGLS 385

[Close]

BLAST of CsGy5G028780 vs. TrEMBL
Match: tr|A0A0A0KXK4|A0A0A0KXK4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G638455 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.2e-08
Identity = 31/34 (91.18%), Postives = 31/34 (91.18%), Query Frame = 0


Query: 30  KIVYSAPQQRVLNHPSIACFVSHCGWNSTLESLS 64
           KIV  APQQ VLNHPSIACFVSHCGWNSTLESLS
Sbjct: 332 KIVGWAPQQSVLNHPSIACFVSHCGWNSTLESLS 365

[Close]

BLAST of CsGy5G028780 vs. TrEMBL
Match: tr|A0A0A0KUF9|A0A0A0KUF9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G638465 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.2e-08
Identity = 31/34 (91.18%), Postives = 31/34 (91.18%), Query Frame = 0


Query: 30  KIVYSAPQQRVLNHPSIACFVSHCGWNSTLESLS 64
           KIV  APQQ VLNHPSIACFVSHCGWNSTLESLS
Sbjct: 332 KIVGWAPQQSVLNHPSIACFVSHCGWNSTLESLS 365

[Close]

BLAST of CsGy5G028780 vs. TrEMBL
Match: tr|A0A2P5A5Q9|A0A2P5A5Q9_PARAD (UDP-glucuronosyl/UDP-glucosyltransferase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_366040 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 4.2e-08
Identity = 31/47 (65.96%), Postives = 37/47 (78.72%), Query Frame = 0


Query: 17  KLHSSRQNSIPGFKIVYSAPQQRVLNHPSIACFVSHCGWNSTLESLS 64
           +L S+ +N+    KIV  APQQ+VL HPSIACFVSHCGWNST+E LS
Sbjct: 339 ELQSNEKNNNNIGKIVNWAPQQKVLGHPSIACFVSHCGWNSTIEGLS 385

The following BLAST results are available for this feature:

BLAST of CsGy5G028780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_006573253.1	2.0e-09	56.14	UDP-glycosyltransferase 83A1 [Glycine max]	[more]
XP_008459382.1	9.9e-09	94.12	PREDICTED: UDP-glycosyltransferase 83A1 [Cucumis melo]	[more]
XP_022938984.1	2.2e-08	91.18	UDP-glycosyltransferase 83A1-like [Cucurbita moschata]	[more]
XP_022993600.1	2.2e-08	91.18	UDP-glycosyltransferase 83A1 [Cucurbita maxima]	[more]
XP_023549624.1	2.2e-08	91.18	UDP-glycosyltransferase 83A1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy5G028780 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G15480.1	2.4e-09	72.73	UDP-Glycosyltransferase superfamily protein	[more]
AT4G15490.1	3.2e-09	70.59	UDP-Glycosyltransferase superfamily protein	[more]
AT3G21560.1	1.6e-08	64.71	UDP-Glycosyltransferase superfamily protein	[more]
AT4G15500.1	7.8e-08	61.76	UDP-Glycosyltransferase superfamily protein	[more]
AT1G05675.1	3.0e-07	70.00	UDP-Glycosyltransferase superfamily protein	[more]

BLAST of CsGy5G028780 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9MB73\|LGT_CITUN	2.6e-08	67.65	Limonoid UDP-glucosyltransferase OS=Citrus unshiu OX=55188 PE=2 SV=1	[more]
sp\|Q5XF20\|U84A1_ARATH	4.4e-08	72.73	UDP-glycosyltransferase 84A1 OS=Arabidopsis thaliana OX=3702 GN=UGT84A1 PE=1 SV=...	[more]
sp\|Q66PF4\|CGT_FRAAN	5.7e-08	64.71	Cinnamate beta-D-glucosyltransferase OS=Fragaria ananassa OX=3747 GN=GT2 PE=1 SV...	[more]
sp\|O23401\|U84A3_ARATH	5.7e-08	70.59	UDP-glycosyltransferase 84A3 OS=Arabidopsis thaliana OX=3702 GN=UGT84A3 PE=1 SV=...	[more]
sp\|V5LLZ9\|GGT_QUERO	7.4e-08	64.71	Gallate 1-beta-glucosyltransferase OS=Quercus robur OX=38942 GN=UGT84A13 PE=1 SV...	[more]

BLAST of CsGy5G028780 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CB98\|A0A1S3CB98_CUCME	6.5e-09	94.12	UDP-glycosyltransferase 83A1 OS=Cucumis melo OX=3656 GN=LOC103498530 PE=4 SV=1	[more]
tr\|A0A2P5ED73\|A0A2P5ED73_9ROSA	2.5e-08	65.96	UDP-glucuronosyl/UDP-glucosyltransferase OS=Trema orientalis OX=63057 GN=TorRG33...	[more]
tr\|A0A0A0KXK4\|A0A0A0KXK4_CUCSA	3.2e-08	91.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G638455 PE=4 SV=1	[more]
tr\|A0A0A0KUF9\|A0A0A0KUF9_CUCSA	3.2e-08	91.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G638465 PE=4 SV=1	[more]
tr\|A0A2P5A5Q9\|A0A2P5A5Q9_PARAD	4.2e-08	65.96	UDP-glucuronosyl/UDP-glucosyltransferase OS=Parasponia andersonii OX=3476 GN=Pan...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0016758	transferase activity, transferring hexosyl groups

Vocabulary: **INTERPRO**
Term	Definition
IPR002213	UDP_glucos_trans

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016758	transferase activity, transferring hexosyl groups

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G028780.1	CsGy5G028780.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.40.50.2000		coord: 30..63 e-value: 2.0E-16 score: 62.5
None	No IPR available	PANTHER	PTHR11926	GLUCOSYL/GLUCURONOSYL TRANSFERASES	coord: 22..62
None	No IPR available	PANTHER	PTHR11926:SF361	SUBFAMILY NOT NAMED	coord: 22..62
None	No IPR available	SUPERFAMILY	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase	coord: 11..63
IPR002213	UDP-glucuronosyl/UDP-glucosyltransferase	PFAM	PF00201	UDPGT	coord: 31..63 e-value: 5.2E-6 score: 25.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy5G028780	MELO3C022031.2	Melon (DHL92) v3.6.1	cgybmedB299
CsGy5G028780	Cla97C11G211500	Watermelon (97103) v2	cgybwmbB341
CsGy5G028780	Bhi06G000281	Wax gourd	cgybwgoB447
CsGy5G028780	Carg02223	Silver-seed gourd	carcgybB0280

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy5G028780	Cucurbita maxima (Rimu)	cgybcmaB609
CsGy5G028780	Cucurbita maxima (Rimu)	cgybcmaB647
CsGy5G028780	Cucurbita moschata (Rifu)	cgybcmoB584
CsGy5G028780	Cucurbita moschata (Rifu)	cgybcmoB625
CsGy5G028780	Cucurbita pepo (Zucchini)	cgybcpeB598
CsGy5G028780	Cucurbita pepo (Zucchini)	cgybcpeB625
CsGy5G028780	Cucurbita pepo (Zucchini)	cgybcpeB674
CsGy5G028780	Cucumber (Chinese Long) v2	cgybcuB201
CsGy5G028780	Cucumber (Chinese Long) v2	cgybcuB223
CsGy5G028780	Bottle gourd (USVL1VR-Ls)	cgyblsiB317
CsGy5G028780	Bottle gourd (USVL1VR-Ls)	cgyblsiB325
CsGy5G028780	Melon (DHL92) v3.5.1	cgybmeB299
CsGy5G028780	Melon (DHL92) v3.5.1	cgybmeB322
CsGy5G028780	Melon (DHL92) v3.5.1	cgybmeB333
CsGy5G028780	Melon (DHL92) v3.6.1	cgybmedB335
CsGy5G028780	Watermelon (Charleston Gray)	cgybwcgB328
CsGy5G028780	Watermelon (Charleston Gray)	cgybwcgB353
CsGy5G028780	Watermelon (97103) v1	cgybwmB399
CsGy5G028780	Watermelon (97103) v1	cgybwmB409
CsGy5G028780	Wild cucumber (PI 183967)	cgybcpiB203
CsGy5G028780	Wild cucumber (PI 183967)	cgybcpiB225
CsGy5G028780	Silver-seed gourd	carcgybB0021
CsGy5G028780	Silver-seed gourd	carcgybB0055
CsGy5G028780	Cucumber (Chinese Long) v3	cgybcucB203
CsGy5G028780	Cucumber (Chinese Long) v3	cgybcucB232
CsGy5G028780	Watermelon (97103) v2	cgybwmbB357
CsGy5G028780	Wax gourd	cgybwgoB474