CsGy5G027700 (gene) Cucumber (Gy14) v2

Overview
NameCsGy5G027700
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptionperoxidase
LocationChr5 : 31525786 .. 31526231 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAGGAGGTCACGAGTGGCGGCCGCAAGGATGTCGGCGCAGGAGACGGTGTTGGGGCAGGAGAGTTCGAGAGCTGTTTTAGCACGAACGACAATGTCGAAGGCATCGCCGGGGAGAGATAGGTTGATGTCGGCGTTGCGTTCAGCGGCGTTAAAGGGGGTAGAGGAGATGAGGATGGAGGCGTCGCAGCCGTTAGGGAGACAGTCGTGGAAGAAGAGACGGAGGGTGGCGGCGGCAGTAGTGGGGTTGGTGATTTGTTTGTTGGTGACGGTGTCGCGGATGATTTGAGAAAACGCAGGGCAGGAGCTCCGGTAGTAGTCGGGGGAGAGAGCAGCGGAGGAGGAATGAGAGAAGAGGGAGAGGAGGAGGAGGATGAGAAGAAGGAGAAACTCCATGGGGATGAGAGAATTGAGACAAATGGTGAAGAAGTGAAGATCAAATGA

mRNA sequence

ATGGTGAGGAGGTCACGAGTGGCGGCCGCAAGGATGTCGGCGCAGGAGACGGTGTTGGGGCAGGAGAGTTCGAGAGCTGTTTTAGCACGAACGACAATGTCGAAGGCATCGCCGGGGAGAGATAGCGGCGTTAAAGGGGGTAGAGGAGATGAGGATGGAGGCGTCGCAGCCGTTAGGGAGACAGTCGTGGAAGAAGAGACGGAGGGTGGCGGCGGCAGTAGTGGGGTTGGTGATTTGTTTGTTGGTGACGGTGTCGCGGATGATTTGAGAAAACGCAGGGCAGGAGCTCCGGTAGTAGTCGGGGGAGAGAGCAGCGGAGGAGGAATGAGAGAAGAGGGAGAGGAGGAGGAGGATGAGAAGAAGGAGAAACTCCATGGGGATGAGAGAATTGAGACAAATGGTGAAGAAGTGAAGATCAAATGA

Coding sequence (CDS)

ATGGTGAGGAGGTCACGAGTGGCGGCCGCAAGGATGTCGGCGCAGGAGACGGTGTTGGGGCAGGAGAGTTCGAGAGCTGTTTTAGCACGAACGACAATGTCGAAGGCATCGCCGGGGAGAGATAGCGGCGTTAAAGGGGGTAGAGGAGATGAGGATGGAGGCGTCGCAGCCGTTAGGGAGACAGTCGTGGAAGAAGAGACGGAGGGTGGCGGCGGCAGTAGTGGGGTTGGTGATTTGTTTGTTGGTGACGGTGTCGCGGATGATTTGAGAAAACGCAGGGCAGGAGCTCCGGTAGTAGTCGGGGGAGAGAGCAGCGGAGGAGGAATGAGAGAAGAGGGAGAGGAGGAGGAGGATGAGAAGAAGGAGAAACTCCATGGGGATGAGAGAATTGAGACAAATGGTGAAGAAGTGAAGATCAAATGA

Protein sequence

MVRRSRVAAARMSAQETVLGQESSRAVLARTTMSKASPGRDSGVKGGRGDEDGGVAAVRETVVEEETEGGGGSSGVGDLFVGDGVADDLRKRRAGAPVVVGGESSGGGMREEGEEEEDEKKEKLHGDERIETNGEEVKIK
Homology
[Close]
BLAST of CsGy5G027700 vs. NCBI nr
Match: PON47470.1 (peroxidase [Parasponia andersonii])

HSP 1 Score: 60.8 bits (146), Expect = 4.1e-06
Identity = 36/48 (75.00%), Postives = 38/48 (79.17%), Query Frame = 0 

Query: 1  MVRRSRVAAARMSAQETVLGQESSRAVLARTTMSKASPGRDSGVKGGR 49
          MV RSR A ARMSAQETVLGQ SSRAVLARTT SKASPGR+  +   R
Sbjct: 1  MVTRSRAATARMSAQETVLGQASSRAVLARTTTSKASPGRERLMSASR 48

[Close]
BLAST of CsGy5G027700 vs. NCBI nr
Match: PON75999.1 (peroxidase [Trema orientalis])

HSP 1 Score: 60.8 bits (146), Expect = 4.1e-06
Identity = 36/48 (75.00%), Postives = 38/48 (79.17%), Query Frame = 0 

Query: 1  MVRRSRVAAARMSAQETVLGQESSRAVLARTTMSKASPGRDSGVKGGR 49
          MV RSR A ARMSAQETVLGQ SSRAVLARTT SKASPGR+  +   R
Sbjct: 1  MVTRSRAATARMSAQETVLGQASSRAVLARTTTSKASPGRERLMSASR 48

[Close]
BLAST of CsGy5G027700 vs. TrEMBL
Match: tr|A0A2P5DRV1|A0A2P5DRV1_9ROSA (Peroxidase OS=Trema orientalis OX=63057 GN=TorRG33x02_243980 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.7e-06
Identity = 36/48 (75.00%), Postives = 38/48 (79.17%), Query Frame = 0 

Query: 1  MVRRSRVAAARMSAQETVLGQESSRAVLARTTMSKASPGRDSGVKGGR 49
          MV RSR A ARMSAQETVLGQ SSRAVLARTT SKASPGR+  +   R
Sbjct: 1  MVTRSRAATARMSAQETVLGQASSRAVLARTTTSKASPGRERLMSASR 48

[Close]
BLAST of CsGy5G027700 vs. TrEMBL
Match: tr|A0A2P5BFA5|A0A2P5BFA5_PARAD (Peroxidase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_244290 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.7e-06
Identity = 36/48 (75.00%), Postives = 38/48 (79.17%), Query Frame = 0 

Query: 1  MVRRSRVAAARMSAQETVLGQESSRAVLARTTMSKASPGRDSGVKGGR 49
          MV RSR A ARMSAQETVLGQ SSRAVLARTT SKASPGR+  +   R
Sbjct: 1  MVTRSRAATARMSAQETVLGQASSRAVLARTTTSKASPGRERLMSASR 48

The following BLAST results are available for this feature:
BLAST of CsGy5G027700 vs. NCBI nr
Match NameE-valueIdentityDescription
PON47470.14.1e-0675.00peroxidase [Parasponia andersonii][more]
PON75999.14.1e-0675.00peroxidase [Trema orientalis][more]
BLAST of CsGy5G027700 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy5G027700 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy5G027700 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A2P5DRV1|A0A2P5DRV1_9ROSA2.7e-0675.00Peroxidase OS=Trema orientalis OX=63057 GN=TorRG33x02_243980 PE=4 SV=1[more]
tr|A0A2P5BFA5|A0A2P5BFA5_PARAD2.7e-0675.00Peroxidase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_244290 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G027700.1CsGy5G027700.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..140
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..140

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy5G027700Cucumber (Gy14) v2cgybcgybB032
CsGy5G027700Cucurbita maxima (Rimu)cgybcmaB609
CsGy5G027700Cucurbita maxima (Rimu)cgybcmaB647
CsGy5G027700Cucurbita moschata (Rifu)cgybcmoB584
CsGy5G027700Cucurbita moschata (Rifu)cgybcmoB625
CsGy5G027700Cucurbita pepo (Zucchini)cgybcpeB598
CsGy5G027700Cucurbita pepo (Zucchini)cgybcpeB625
CsGy5G027700Cucumber (Chinese Long) v2cgybcuB203
CsGy5G027700Cucumber (Chinese Long) v2cgybcuB217
CsGy5G027700Cucumber (Chinese Long) v2cgybcuB223
CsGy5G027700Bottle gourd (USVL1VR-Ls)cgyblsiB319
CsGy5G027700Bottle gourd (USVL1VR-Ls)cgyblsiB324
CsGy5G027700Melon (DHL92) v3.5.1cgybmeB299
CsGy5G027700Melon (DHL92) v3.5.1cgybmeB331
CsGy5G027700Melon (DHL92) v3.6.1cgybmedB299
CsGy5G027700Melon (DHL92) v3.6.1cgybmedB333
CsGy5G027700Watermelon (Charleston Gray)cgybwcgB315
CsGy5G027700Watermelon (Charleston Gray)cgybwcgB319
CsGy5G027700Watermelon (Charleston Gray)cgybwcgB338
CsGy5G027700Watermelon (97103) v1cgybwmB340
CsGy5G027700Wild cucumber (PI 183967)cgybcpiB206
CsGy5G027700Wild cucumber (PI 183967)cgybcpiB225
CsGy5G027700Silver-seed gourdcarcgybB0280
CsGy5G027700Silver-seed gourdcarcgybB0686
CsGy5G027700Cucumber (Chinese Long) v3cgybcucB207
CsGy5G027700Cucumber (Chinese Long) v3cgybcucB232
CsGy5G027700Cucumber (Chinese Long) v3cgybcucB225
CsGy5G027700Watermelon (97103) v2cgybwmbB326
CsGy5G027700Watermelon (97103) v2cgybwmbB390
CsGy5G027700Wax gourdcgybwgoB447
CsGy5G027700Wax gourdcgybwgoB475