CsGy5G026700 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.atgccgccagaacctttgccgtgggacaggaaagacctcttcaaggagaggaaacacgagaagtcggaggccatagggtctgcggccagatggcgggactcttatcatggatctcgcgagtttaatcggtggggttctgctgacttacgaaggcctactggtgagttttgatgttactttactgtttcctccgtttcaacttcttagatccttgggcgtcttagctggtttattacaatcgcatttatttttaataatcttgagtttttggcccggctttctttgaagctttggatgataaaggatttcgggtttcattcctgctgagattttgggccgtcctcaaaacctgcctgcatactttttgtcttctgatattgatactctttgctgtccttttttcctgaaggtcatggtaagcagggtggttggcatcagtttttctgaagactctagtcacggttatggaccttctcggtcattcagtgacagggtgatagaagatgagagcttccggccgtcagttcctcgtggtgatggaaagtatattagaatcggtagagaaagtagaggttcttttagtcatagagactggagaagtcactcaagagatgctaacaatggatttgggaacccttcacgaagaacgtcatcgcaggatgtgagttctgatcagaggtcagtagatgatacggtgacatattcctctcctcaatcgtttcatgggttagaaaatggcccgaggtctgatgtggaagtttcccttggctccatgattggaagccgcttaagtggtccagatctgggagtttgtcttctcggggatctgcttacagcagttcaacaaactcgaagaatgaaaaggccgatttacctcttagagttgcatctcctatag ATGCCGCCAGAACCTTTGCCGTGGGACAGGAAAGACCTCTTCAAGGAGAGGAAACACGAGAAGTCGGAGGCCATAGGGTCTGCGGCCAGATGGCGGGACTCTTATCATGGATCTCGCGAGTTTAATCGGTGGGGTTCTGCTGACTTACGAAGGCCTACTGTTTTTGGCCCGGCTTTCTTTGAAGCTTTGGATGATAAAGGATTTCGGGTCATGGTAAGCAGGGTGGTTGGCATCAGTTTTTCTGAAGACTCTAGTCACGGTTATGGACCTTCTCGGTCATTCAGTGACAGGGTGATAGAAGATGAGAGCTTCCGGCCGTCAGTTCCTCGTGGTGATGGAAAGTATATTAGAATCGGTAGAGAAAGTAGAGGTTCTTTTAGTCATAGAGACTGGAGAAGTCACTCAAGAGATGCTAACAATGGATTTGGGAACCCTTCACGAAGAACGTCATCGCAGGATGTGAGTTCTGATCAGAGGTCAGTAGATGATACGGTGACATATTCCTCTCCTCAATCGTTTCATGGGTTAGAAAATGGCCCGAGGTCTGATGTGGAAGTTTCCCTTGGCTCCATGATTGGAAGCCGCTTAAGTGGTCCAGATCTGGGAGTTTGTCTTCTCGGGGATCTGCTTACAGCAGTTCAACAAACTCGAAGAATGAAAAGGCCGATTTACCTCTTAGAGTTGCATCTCCTATAG atgccgccagaacctttgccgtgggacaggaaagacctcttcaaggagaggaaacacgagaagtcggaggccatagggtctgcggccagatggcgggactcttatcatggatctcgcgagtttaatcggtggggttctgctgacttacgaaggcctactgtttttggcccggctttctttgaagctttggatgataaaggatttcgggtcatggtaagcagggtggttggcatcagtttttctgaagactctagtcacggttatggaccttctcggtcattcagtgacagggtgatagaagatgagagcttccggccgtcagttcctcgtggtgatggaaagtatattagaatcggtagagaaagtagaggttcttttagtcatagagactggagaagtcactcaagagatgctaacaatggatttgggaacccttcacgaagaacgtcatcgcaggatgtgagttctgatcagaggtcagtagatgatacggtgacatattcctctcctcaatcgtttcatgggttagaaaatggcccgaggtctgatgtggaagtttcccttggctccatgattggaagccgcttaagtggtccagatctgggagtttgtcttctcggggatctgcttacagcagttcaacaaactcgaagaatgaaaaggccgatttacctcttagagttgcatctcctatag MPPEPLPWDRKDLFKERKHEKSEAIGSAARWRDSYHGSREFNRWGSADLRRPTVFGPAFFEALDDKGFRVMVSRVVGISFSEDSSHGYGPSRSFSDRVIEDESFRPSVPRGDGKYIRIGRESRGSFSHRDWRSHSRDANNGFGNPSRRTSSQDVSSDQRSVDDTVTYSSPQSFHGLENGPRSDVEVSLGSMIGSRLSGPDLGVCLLGDLLTAVQQTRRMKRPIYLLELHLL
BLAST of CsGy5G026700 vs. NCBI nr
Match: XP_004142488.1 (PREDICTED: uncharacterized protein LOC101222167 [Cucumis sativus] >KGN52286.1 hypothetical protein Csa_5G623500 [Cucumis sativus]) HSP 1 Score: 321.2 bits (822), Expect = 2.8e-84 Identity = 166/190 (87.37%), Postives = 167/190 (87.89%), Query Frame = 0
BLAST of CsGy5G026700 vs. NCBI nr
Match: XP_008446909.2 (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103489481 [Cucumis melo]) HSP 1 Score: 317.4 bits (812), Expect = 4.0e-83 Identity = 164/190 (86.32%), Postives = 165/190 (86.84%), Query Frame = 0
BLAST of CsGy5G026700 vs. NCBI nr
Match: XP_022139263.1 (uncharacterized protein LOC111010219 [Momordica charantia]) HSP 1 Score: 275.0 bits (702), Expect = 2.3e-70 Identity = 150/210 (71.43%), Postives = 159/210 (75.71%), Query Frame = 0
BLAST of CsGy5G026700 vs. NCBI nr
Match: XP_022989544.1 (uncharacterized protein LOC111486582 [Cucurbita maxima]) HSP 1 Score: 271.9 bits (694), Expect = 1.9e-69 Identity = 147/210 (70.00%), Postives = 156/210 (74.29%), Query Frame = 0
BLAST of CsGy5G026700 vs. NCBI nr
Match: XP_022956541.1 (uncharacterized protein LOC111458252 [Cucurbita moschata]) HSP 1 Score: 270.4 bits (690), Expect = 5.7e-69 Identity = 146/210 (69.52%), Postives = 155/210 (73.81%), Query Frame = 0
BLAST of CsGy5G026700 vs. TAIR10
Match: AT3G52250.1 (Duplicated homeodomain-like superfamily protein) HSP 1 Score: 78.6 bits (192), Expect = 5.7e-15 Identity = 62/175 (35.43%), Postives = 94/175 (53.71%), Query Frame = 0
BLAST of CsGy5G026700 vs. TrEMBL
Match: tr|A0A0A0KWU7|A0A0A0KWU7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623500 PE=4 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 1.9e-84 Identity = 166/190 (87.37%), Postives = 167/190 (87.89%), Query Frame = 0
BLAST of CsGy5G026700 vs. TrEMBL
Match: tr|A0A1S3BG74|A0A1S3BG74_CUCME (LOW QUALITY PROTEIN: uncharacterized protein LOC103489481 OS=Cucumis melo OX=3656 GN=LOC103489481 PE=4 SV=1) HSP 1 Score: 317.4 bits (812), Expect = 2.7e-83 Identity = 164/190 (86.32%), Postives = 165/190 (86.84%), Query Frame = 0
BLAST of CsGy5G026700 vs. TrEMBL
Match: tr|V7BGV3|V7BGV3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_007G093100g PE=4 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 4.3e-41 Identity = 106/210 (50.48%), Postives = 129/210 (61.43%), Query Frame = 0
BLAST of CsGy5G026700 vs. TrEMBL
Match: tr|V7BDQ3|V7BDQ3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_007G093100g PE=4 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 4.3e-41 Identity = 106/210 (50.48%), Postives = 129/210 (61.43%), Query Frame = 0
BLAST of CsGy5G026700 vs. TrEMBL
Match: tr|A0A1S3V4T1|A0A1S3V4T1_VIGRR (uncharacterized protein LOC106771825 isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106771825 PE=4 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 1.3e-40 Identity = 107/210 (50.95%), Postives = 128/210 (60.95%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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