CsGy5G025620 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAAAAAATTCTCTTAAGGGTAGAAGAGTTGGTTGTAACCTAATAGATGACTGCCCTTCCTTCATCATGCTCAATGATACATGCATATCCGAACTCATATTTCATGGCGGTTTGATTTTGACACTTCTATATCACTAAGTTGATTCAAAGAGAATCCTAATTGTCTTTTTAGGTCAATGGCAGGATGATCATCGTTTGTTGTCCTTTGTAATTCAACTTGTGTTTAAATCATAAATGTCGAAACAAGTAAAAGTAGCCTCCAATGAGTTGAACTTAAGAGCAGACCATTTCTATATAGGGTGCTAGAAAAAGTAGGAAAAAATGATAAAAGGTCAAAAGTGAAGAAGAAATCTGTAATAATGTCAAAGCTATTAATATTGTGAATTTGGATTCATTGAACAGGAAATCAAACAAGGTTACTTAGCAGAAAGACATGCGCATGTAACTTCCAAGAACCTAAAACTGATGCTAGCAGGAGCAAATGAGAGCAGGCTAGCTACGTACAAACCCGGTTCCCAGCTCGCAATCGTTTCTCTCGGAAGGAAAGAAGGAGTTGCACAACTACCTTTCATTACAATTAGTGGATGCATCCCTGGATTGATTAAATCTGGAGACTTGTTTGTGGGAAAGACAAGAAAGGAACTTGGATTAGCACCTTGA ATGAAAAAAAATTCTCTTAAGGGTAGAAGAGTTGGTTGTAACCTAATAGATGACTGCCCTTCCTTCATCATGCTCAATGATACATGCATATCCGAACTCATATTTCATGGCGGTCAATGGCAGGATGATCATCGTTTGTTGTCCTTTGTAATTCAACTTGAAATCAAACAAGGTTACTTAGCAGAAAGACATGCGCATGTAACTTCCAAGAACCTAAAACTGATGCTAGCAGGAGCAAATGAGAGCAGGCTAGCTACGTACAAACCCGGTTCCCAGCTCGCAATCGTTTCTCTCGGAAGGAAAGAAGGAGTTGCACAACTACCTTTCATTACAATTAGTGGATGCATCCCTGGATTGATTAAATCTGGAGACTTGTTTGTGGGAAAGACAAGAAAGGAACTTGGATTAGCACCTTGA ATGAAAAAAAATTCTCTTAAGGGTAGAAGAGTTGGTTGTAACCTAATAGATGACTGCCCTTCCTTCATCATGCTCAATGATACATGCATATCCGAACTCATATTTCATGGCGGTCAATGGCAGGATGATCATCGTTTGTTGTCCTTTGTAATTCAACTTGAAATCAAACAAGGTTACTTAGCAGAAAGACATGCGCATGTAACTTCCAAGAACCTAAAACTGATGCTAGCAGGAGCAAATGAGAGCAGGCTAGCTACGTACAAACCCGGTTCCCAGCTCGCAATCGTTTCTCTCGGAAGGAAAGAAGGAGTTGCACAACTACCTTTCATTACAATTAGTGGATGCATCCCTGGATTGATTAAATCTGGAGACTTGTTTGTGGGAAAGACAAGAAAGGAACTTGGATTAGCACCTTGA MKKNSLKGRRVGCNLIDDCPSFIMLNDTCISELIFHGGQWQDDHRLLSFVIQLEIKQGYLAERHAHVTSKNLKLMLAGANESRLATYKPGSQLAIVSLGRKEGVAQLPFITISGCIPGLIKSGDLFVGKTRKELGLAP
BLAST of CsGy5G025620 vs. NCBI nr
Match: AAQ76041.1 (pyridine nucleotide-disulphide oxidoreductase, partial [Cucumis sativus]) HSP 1 Score: 170.2 bits (430), Expect = 4.8e-39 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of CsGy5G025620 vs. NCBI nr
Match: XP_004135044.1 (PREDICTED: apoptosis-inducing factor 2-like [Cucumis sativus] >KGN52172.1 hypothetical protein Csa_5G613500 [Cucumis sativus]) HSP 1 Score: 170.2 bits (430), Expect = 4.8e-39 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of CsGy5G025620 vs. NCBI nr
Match: XP_008446741.1 (PREDICTED: apoptosis-inducing factor 2-like [Cucumis melo]) HSP 1 Score: 167.9 bits (424), Expect = 2.4e-38 Identity = 83/85 (97.65%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of CsGy5G025620 vs. NCBI nr
Match: XP_022981745.1 (apoptosis-inducing factor 2-like [Cucurbita maxima]) HSP 1 Score: 161.0 bits (406), Expect = 2.9e-36 Identity = 78/85 (91.76%), Postives = 82/85 (96.47%), Query Frame = 0
BLAST of CsGy5G025620 vs. NCBI nr
Match: XP_022957071.1 (apoptosis-inducing factor 2-like [Cucurbita moschata]) HSP 1 Score: 160.2 bits (404), Expect = 4.9e-36 Identity = 78/85 (91.76%), Postives = 81/85 (95.29%), Query Frame = 0
BLAST of CsGy5G025620 vs. TAIR10
Match: AT3G44190.1 (FAD/NAD(P)-binding oxidoreductase family protein) HSP 1 Score: 129.0 bits (323), Expect = 2.2e-30 Identity = 57/85 (67.06%), Postives = 73/85 (85.88%), Query Frame = 0
BLAST of CsGy5G025620 vs. TAIR10
Match: AT5G22140.1 (FAD/NAD(P)-binding oxidoreductase family protein) HSP 1 Score: 123.2 bits (308), Expect = 1.2e-28 Identity = 55/85 (64.71%), Postives = 71/85 (83.53%), Query Frame = 0
BLAST of CsGy5G025620 vs. Swiss-Prot
Match: sp|B4F6I3|AIFM2_XENTR (Apoptosis-inducing factor 2 OS=Xenopus tropicalis OX=8364 GN=aifm2 PE=2 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 9.5e-07 Identity = 31/82 (37.80%), Postives = 45/82 (54.88%), Query Frame = 0
BLAST of CsGy5G025620 vs. Swiss-Prot
Match: sp|Q6GLW8|AIFM2_XENLA (Apoptosis-inducing factor 2 OS=Xenopus laevis OX=8355 GN=aifm2 PE=2 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.2e-06 Identity = 30/82 (36.59%), Postives = 45/82 (54.88%), Query Frame = 0
BLAST of CsGy5G025620 vs. Swiss-Prot
Match: sp|B5FXE5|AIFM2_TAEGU (Apoptosis-inducing factor 2 OS=Taeniopygia guttata OX=59729 GN=AIFM2 PE=2 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 3.1e-05 Identity = 28/82 (34.15%), Postives = 44/82 (53.66%), Query Frame = 0
BLAST of CsGy5G025620 vs. Swiss-Prot
Match: sp|Q9BRQ8|AIFM2_HUMAN (Apoptosis-inducing factor 2 OS=Homo sapiens OX=9606 GN=AIFM2 PE=1 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 4.0e-05 Identity = 27/83 (32.53%), Postives = 43/83 (51.81%), Query Frame = 0
BLAST of CsGy5G025620 vs. Swiss-Prot
Match: sp|A5PJM4|AIFM2_BOVIN (Apoptosis-inducing factor 2 OS=Bos taurus OX=9913 GN=AIFM2 PE=2 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 1.2e-04 Identity = 28/85 (32.94%), Postives = 43/85 (50.59%), Query Frame = 0
BLAST of CsGy5G025620 vs. TrEMBL
Match: tr|Q6UCJ2|Q6UCJ2_CUCSA (Pyridine nucleotide-disulphide oxidoreductase (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 3.2e-39 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of CsGy5G025620 vs. TrEMBL
Match: tr|A0A0A0KUQ7|A0A0A0KUQ7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G613500 PE=4 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 3.2e-39 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of CsGy5G025620 vs. TrEMBL
Match: tr|A0A1S3BGG0|A0A1S3BGG0_CUCME (apoptosis-inducing factor 2-like OS=Cucumis melo OX=3656 GN=LOC103489371 PE=4 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 1.6e-38 Identity = 83/85 (97.65%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of CsGy5G025620 vs. TrEMBL
Match: tr|M5WG40|M5WG40_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa007651mg PE=4 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 3.5e-30 Identity = 65/85 (76.47%), Postives = 75/85 (88.24%), Query Frame = 0
BLAST of CsGy5G025620 vs. TrEMBL
Match: tr|A0A251QCN6|A0A251QCN6_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G072100 PE=4 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 3.5e-30 Identity = 65/85 (76.47%), Postives = 75/85 (88.24%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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