CsGy5G021730 (gene) Cucumber (Gy14) v2

NameCsGy5G021730
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUnknown Protein
LocationChr5 : 27400710 .. 27401862 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTCAGGAACCTCAGTCAAGTTGTTGAAATTACCACTAAGGTTCAACACCTCGAGACTCGTTAACCTTCCTATGGCTGGAGGTAAGGCATGGAGTTGATTGAAATGTGCATCAAAATATTTTAAAGATCTAAGTTGACAAATCGATGTAGGAAAGTAACATATTTTGTTAAGCTGTATTGATAGTCTTTCAAGATTGACCAATCCATATCCGATGTTTATTGGTAAACCTTGGAGATTGTTGAAACTTGCATCCAACTCCACCAACGAACTACAGTAAAAAAAGAAACCATGTAATCAAATCTTCAAAACTCACAGCACAAGGAATCAACATTATATTTATATTTTCCATGTGCTTCGGGATTTAGATACCTGCAACCAGTAATGGTTTCGGGAAGCACTTTCAGCTTGTTCCCTGATACAATGACGACCTTCAAATTAATCAATACCCCTATAGAATCAGGAAGTGATTCCAATAAGTTCGAAGAAATGTCTAGGCGCTGGAGTTTCTGAAGCCCAGCAATTGAATCAGGAAGAACCTGTCCACCATACACAAAAATACCGTCAATTTCGGAAGAAATTATGGAGATACTTGTATATATTTTGTCAAATTTAATTTTCTCTCGTCCATCCAGTGAATCCATTAAAAAAATAAAGGTAGAAGACGAAAATTACCTCCAACTGATTATGAGATAGATTAAGGTCAATCAACCGTCGAAGTTTCCCAAACTCCTCAGGAAGAAACCTGATTTGTTGCCCAAAAAGGTCGACTTTCTCCACCACTCCACTCGCAGCCTCTTTCAAAATTCTAATAACTTCCTCATTCACGTCCAAGTTCGTCCCCTTGTCCAACTCCGCAACCGCCGATTCATAAACCTCAACCACACGATCCTGCACAGCAATTAACTGCTTCTCATAACCTTCGTGCATCTCCTCCAACCGAGCCACCGCCTTATATATTTCTGTTTCCTTTTCCGCCGCCCTTCTCAGCTTCTTCTCTCTCTCAACGCGATCCTCAGCCTCAAACCCACCGTGACCGGCTTCGTCCTCGATTTCCTGAAGATTTTTTTGAAGTGTGGATTGGATTTCAATTATCCTGTCACAAGCGGCGGCAACAGCGGAGGAATCAGGGCGTGGACCGAGTGAAATGA

mRNA sequence

ATGGATTCAGGAACCTCAGTCAAGTTGTTGAAATTACCACTAAGGTTCAACACCTCGAGACTCGTTAACCTTCCTATGGCTGGAGGCGCTGGAGTTTCTGAAGCCCAGCAATTGAATCAGGAAGAACCTGTCCACCATACACAAAAATACCGTCAATTTCGGAAGAAATTATGGAGATACTTTTCGTCCCCTTGTCCAACTCCGCAACCGCCGATTCATAAACCTCAACCACACGATCCTGCACAGCAATTAACTGCTTCTCATAACCTTCGTGCATCTCCTCCAACCGAGCCACCGCCTTATATATTTCTGTTTCCTTTTCCGCCGCCCTTCTCAGCTTCTTCTCTCTCTCAACGCGATCCTCAGCCTCAAACCCACCGTGACCGGCTTCGTCCTCGATTTCCTGAAGATTTTTTTGAAGTGTGGATTGGATTTCAATTATCCTGTCACAAGCGGCGGCAACAGCGGAGGAATCAGGGCGTGGACCGAGTGAAATGA

Coding sequence (CDS)

ATGGATTCAGGAACCTCAGTCAAGTTGTTGAAATTACCACTAAGGTTCAACACCTCGAGACTCGTTAACCTTCCTATGGCTGGAGGCGCTGGAGTTTCTGAAGCCCAGCAATTGAATCAGGAAGAACCTGTCCACCATACACAAAAATACCGTCAATTTCGGAAGAAATTATGGAGATACTTTTCGTCCCCTTGTCCAACTCCGCAACCGCCGATTCATAAACCTCAACCACACGATCCTGCACAGCAATTAACTGCTTCTCATAACCTTCGTGCATCTCCTCCAACCGAGCCACCGCCTTATATATTTCTGTTTCCTTTTCCGCCGCCCTTCTCAGCTTCTTCTCTCTCTCAACGCGATCCTCAGCCTCAAACCCACCGTGACCGGCTTCGTCCTCGATTTCCTGAAGATTTTTTTGAAGTGTGGATTGGATTTCAATTATCCTGTCACAAGCGGCGGCAACAGCGGAGGAATCAGGGCGTGGACCGAGTGAAATGA

Protein sequence

MDSGTSVKLLKLPLRFNTSRLVNLPMAGGAGVSEAQQLNQEEPVHHTQKYRQFRKKLWRYFSSPCPTPQPPIHKPQPHDPAQQLTASHNLRASPPTEPPPYIFLFPFPPPFSASSLSQRDPQPQTHRDRLRPRFPEDFFEVWIGFQLSCHKRRQQRRNQGVDRVK
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G021730.1CsGy5G021730.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..99

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy5G021730Cucumber (Gy14) v2cgybcgybB059
CsGy5G021730Cucurbita maxima (Rimu)cgybcmaB590
CsGy5G021730Cucurbita maxima (Rimu)cgybcmaB623
CsGy5G021730Cucurbita maxima (Rimu)cgybcmaB675
CsGy5G021730Cucurbita maxima (Rimu)cgybcmaB694
CsGy5G021730Cucurbita moschata (Rifu)cgybcmoB564
CsGy5G021730Cucurbita moschata (Rifu)cgybcmoB600
CsGy5G021730Cucurbita moschata (Rifu)cgybcmoB653
CsGy5G021730Cucurbita moschata (Rifu)cgybcmoB672
CsGy5G021730Cucurbita pepo (Zucchini)cgybcpeB588
CsGy5G021730Cucurbita pepo (Zucchini)cgybcpeB649
CsGy5G021730Cucurbita pepo (Zucchini)cgybcpeB699
CsGy5G021730Cucumber (Chinese Long) v2cgybcuB205
CsGy5G021730Cucumber (Chinese Long) v2cgybcuB223
CsGy5G021730Bottle gourd (USVL1VR-Ls)cgyblsiB337
CsGy5G021730Bottle gourd (USVL1VR-Ls)cgyblsiB355
CsGy5G021730Melon (DHL92) v3.5.1cgybmeB319
CsGy5G021730Melon (DHL92) v3.5.1cgybmeB340
CsGy5G021730Melon (DHL92) v3.6.1cgybmedB318
CsGy5G021730Melon (DHL92) v3.6.1cgybmedB339
CsGy5G021730Watermelon (Charleston Gray)cgybwcgB359
CsGy5G021730Watermelon (Charleston Gray)cgybwcgB377
CsGy5G021730Watermelon (97103) v1cgybwmB349
CsGy5G021730Watermelon (97103) v1cgybwmB377
CsGy5G021730Wild cucumber (PI 183967)cgybcpiB207
CsGy5G021730Wild cucumber (PI 183967)cgybcpiB225
CsGy5G021730Silver-seed gourdcarcgybB0258
CsGy5G021730Silver-seed gourdcarcgybB0507
CsGy5G021730Silver-seed gourdcarcgybB0624
CsGy5G021730Silver-seed gourdcarcgybB0721
CsGy5G021730Cucumber (Chinese Long) v3cgybcucB209
CsGy5G021730Cucumber (Chinese Long) v3cgybcucB232
CsGy5G021730Watermelon (97103) v2cgybwmbB365
CsGy5G021730Watermelon (97103) v2cgybwmbB383
CsGy5G021730Wax gourdcgybwgoB466
CsGy5G021730Wax gourdcgybwgoB486