CsGy5G018100 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTACGACTATCATTTGATGGGATCCACAGAGACCATGTCTTCATTTATAGGCTCCCAAGTACCTGGATCAATCAAAAGTTCGATTCTTATTGGAACTGTCCATATCCAGTTCATCCTTTGGAACCATATCACATCCCAGACATATATGGTAGAATCGTAACCATAGAATACGACCCTAATCGAAATGCATACATTTGTCTCATACACTATGGGGATGGTGAGAAAAGATATATTTTACATCCCAGAGGGGCTATAATTGGAGATACCATTGTTTCTGGTACAGAAGTTCCTATAAATACTTTTTAG ATGGTACGACTATCATTTGATGGGATCCACAGAGACCATGTCTTCATTTATAGGCTCCCAAGTACCTGGATCAATCAAAAGTTCGATTCTTATTGGAACTGTCCATATCCAGTTCATCCTTTGGAACCATATCACATCCCAGACATATATGGTAGAATCGTAACCATAGAATACGACCCTAATCGAAATGCATACATTTGTCTCATACACTATGGGGATGGTGAGAAAAGATATATTTTACATCCCAGAGGGGCTATAATTGGAGATACCATTGTTTCTGGTACAGAAGTTCCTATAAATACTTTTTAG ATGGTACGACTATCATTTGATGGGATCCACAGAGACCATGTCTTCATTTATAGGCTCCCAAGTACCTGGATCAATCAAAAGTTCGATTCTTATTGGAACTGTCCATATCCAGTTCATCCTTTGGAACCATATCACATCCCAGACATATATGGTAGAATCGTAACCATAGAATACGACCCTAATCGAAATGCATACATTTGTCTCATACACTATGGGGATGGTGAGAAAAGATATATTTTACATCCCAGAGGGGCTATAATTGGAGATACCATTGTTTCTGGTACAGAAGTTCCTATAAATACTTTTTAG MVRLSFDGIHRDHVFIYRLPSTWINQKFDSYWNCPYPVHPLEPYHIPDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPINTF
BLAST of CsGy5G018100 vs. NCBI nr
Match: KGN51388.1 (Ribosomal protein L2 [Cucumis sativus]) HSP 1 Score: 211.1 bits (536), Expect = 1.8e-51 Identity = 95/111 (85.59%), Postives = 98/111 (88.29%), Query Frame = 0
BLAST of CsGy5G018100 vs. NCBI nr
Match: YP_001595549.1 (ribosomal protein L2 [Lemna minor] >A9L9D7.1 RecName: Full=50S ribosomal protein L2, chloroplastic >ABD48536.1 ribosomal protein L2 (chloroplast) [Lemna minor]) HSP 1 Score: 115.5 bits (288), Expect = 1.0e-22 Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0
BLAST of CsGy5G018100 vs. NCBI nr
Match: YP_009259007.1 (ribosomal protein L2 (chloroplast) [Spathiphyllum kochii] >YP_009259030.1 ribosomal protein L2 (chloroplast) [Spathiphyllum kochii] >AEK71777.1 ribosomal protein L2 (plastid) [Spathiphyllum sp. M. J. Moore 338] >AKJ83613.1 ribosomal protein L2 (chloroplast) [Spathiphyllum kochii] >AKJ83614.1 ribosomal protein L2 (chloroplast) [Spathiphyllum kochii]) HSP 1 Score: 115.5 bits (288), Expect = 1.0e-22 Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0
BLAST of CsGy5G018100 vs. NCBI nr
Match: AEK71784.1 (ribosomal protein L2 (plastid) [Tradescantia ohiensis]) HSP 1 Score: 115.5 bits (288), Expect = 1.0e-22 Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0
BLAST of CsGy5G018100 vs. NCBI nr
Match: YP_004769669.1 (ribosomal protein L2 (chloroplast) [Spirodela polyrhiza] >YP_004769692.1 ribosomal protein L2 (chloroplast) [Spirodela polyrhiza] >AEK94381.1 ribosomal protein L2 (chloroplast) [Spirodela polyrhiza] >AEK94404.1 ribosomal protein L2 (chloroplast) [Spirodela polyrhiza]) HSP 1 Score: 115.5 bits (288), Expect = 1.0e-22 Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0
BLAST of CsGy5G018100 vs. TAIR10
Match: ATCG00830.1 (ribosomal protein L2) HSP 1 Score: 115.2 bits (287), Expect = 2.4e-26 Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0
BLAST of CsGy5G018100 vs. TAIR10
Match: ATCG01310.1 (ribosomal protein L2) HSP 1 Score: 115.2 bits (287), Expect = 2.4e-26 Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0
BLAST of CsGy5G018100 vs. Swiss-Prot
Match: sp|A9L9D7|RK2_LEMMI (50S ribosomal protein L2, chloroplastic OS=Lemna minor OX=4472 GN=rpl2 PE=2 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 3.4e-25 Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0
BLAST of CsGy5G018100 vs. Swiss-Prot
Match: sp|Q8S8V3|RK2A_ATRBE (50S ribosomal protein L2-A, chloroplastic OS=Atropa belladonna OX=33113 GN=rpl2-A PE=3 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 4.4e-25 Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0
BLAST of CsGy5G018100 vs. Swiss-Prot
Match: sp|Q8S8U0|RK2B_ATRBE (50S ribosomal protein L2-B, chloroplastic OS=Atropa belladonna OX=33113 GN=rpl2-B PE=3 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 4.4e-25 Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0
BLAST of CsGy5G018100 vs. Swiss-Prot
Match: sp|A4QJF6|RK2_AETCO (50S ribosomal protein L2, chloroplastic OS=Aethionema cordifolium OX=434059 GN=rpl2-A PE=3 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 4.4e-25 Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0
BLAST of CsGy5G018100 vs. Swiss-Prot
Match: sp|A4QJP0|RK2_AETGR (50S ribosomal protein L2, chloroplastic OS=Aethionema grandiflorum OX=72657 GN=rpl2-A PE=3 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 4.4e-25 Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0
BLAST of CsGy5G018100 vs. TrEMBL
Match: tr|A0A0A0KP49|A0A0A0KP49_CUCSA (Ribosomal protein L2 OS=Cucumis sativus OX=3659 GN=Csa_5G524810 PE=4 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 1.2e-51 Identity = 95/111 (85.59%), Postives = 98/111 (88.29%), Query Frame = 0
BLAST of CsGy5G018100 vs. TrEMBL
Match: tr|A0A0M4B7H4|A0A0M4B7H4_9ARAE (50S ribosomal protein L2, chloroplastic OS=Epipremnum aureum OX=78380 GN=rpl2 PE=3 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 6.8e-23 Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0
BLAST of CsGy5G018100 vs. TrEMBL
Match: tr|A0A0U2CJG5|A0A0U2CJG5_PINTE (50S ribosomal protein L2, chloroplastic OS=Pinellia ternata OX=199225 GN=rpl2 PE=3 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 6.8e-23 Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0
BLAST of CsGy5G018100 vs. TrEMBL
Match: tr|G1FBA5|G1FBA5_SPIPO (50S ribosomal protein L2, chloroplastic OS=Spirodela polyrhiza OX=29656 GN=rpl2 PE=3 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 6.8e-23 Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0
BLAST of CsGy5G018100 vs. TrEMBL
Match: tr|A0A220XL94|A0A220XL94_ZANAE (50S ribosomal protein L2, chloroplastic OS=Zantedeschia aethiopica OX=69721 GN=rpl2 PE=3 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 6.8e-23 Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |