CsGy5G017940 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTATCTCTATTGTTCCATCTATCCATCACTCAATGCCGCCAATTGCTTCTTCTCCATCTCTTCCGCATCCTAAGGATCATAACAAGCACATCTTAAGGTAATTCTCTGCACGGAGATCCATCGTAAAGAGCTCTATATTTTGATAATCTTAATTCCTCCAGTTTTTCTGCTAAATAATACTTCTGATGGACGACTTTCGATCGGAAGGGCAGAGATGGACGGCGATTAACGAAACGAACTATTACGAACTTCTTTTAAATTTGACGAGCTTATATATAATTTTGAGCCTTCATTCCTCCAATTTTACTGCTAAATATAATACTTATGATCAGAATCTTGGTCGGAAGGAGGCAGAGATTGACGTCAATTAGATGCAGCGCAAGTGAAAGAGTAAACGAAATGAACTATTACGAGCTTCTTGGAGTTTCTGCAGATTCAAATACTCAAGAAATCAAAGAAGCATACCGAAAGTTGCAGAAGAAATTTCATCCTGATATTGCAGGCCAAGAGGTTTGCTTATTAATGTTCTTCCGGAATTGATCGCAAAACACATTGATTGCTGTTTGATGATTTTTTAAAACTTTGTTAGGGCCACGAGTATACACTGAGACTGAATGAGGCTTATGGGGTTCTGATGAGAGAGGATCGAAGGAAGCAATATGACACTTACACGGGTGGGATGAGGGTCAGATTTGGGAATTTTGGCACCGGATTAGGTTACAGTTCGTGGAATGGACCTCTGAGACCTCAGGCTTTGTTTGTCGATGGGAATGCATGCATAGGTATGTCGTATGGTTGAGCTCATCCTTCAATATTCGCTATCTAAATGAACTTGATTAGAAGTCATCTTAAGTTTAACGTTCTAAACTTTTGAAGCAACAATTTAATTCCTAAATTTTTGTTTGTACCGATTTAGTGTTTAGTTTATAAAATTTATTATATAATAATTTAGTCCTTCTAATTTAAACTTTGTTACAATTTAGTTCTTGCAGTAGAAATTAGTATCAAAGATTTGGTGAGATTATAGAATAATCAAGTTGAGAAACTCATTTCATTTAATTTTGATTAACATTGTGGATTAAATTTTTACAAATTTAAAAGTACAAAGATTAGATTGTTAAATATTAAAGTTTATGAATAAATTATGGTAAAATTGAAAGCACTCACTCCACAATGTTCGCCAACTAAATTGTTGTTTTCACCCAAGTTTAGGAACCAAATATGTGTTTTTAAGACTTTCTGTTTATTTTATTTTTTTAAGAAAAACCAATCAACTTTTAGTAAACAAAATTGCAGGGATATTTATATCTTTTAGGTTTACAACATTAAACTTTCAAAATGTATATTTAGCTCCTAAACTTTCTTTAAAATTACATCTTGGTTTTTAATTTGTTTTAACAAAATAGTGATGTAATTGTAGATGTGTACCAATATATTAATATGACTATAGCTTCAAATCACATCAATTTTAGAGAGAAGTAGTAAACAAGTGAAAGTTAGATACACAAATAATATAAGAATGACCAAAATAGTTGTTTATGGAAGTTTAAGTTCTAAAATAGATGTATAAATGTTTCTGAACCAAAATAGAACTAACACAAAAGTTCTTGTACGAAAATAAATATTTTAAAATTTTAAGACATGTTCGGAACAAGAACTTAGTTATTATAGGCCTAAGTTATTAGAGTTAAGTTATAATAGTTTGTTTTTAAAACGTAAATTATTTTAGTTTGGGTTATAATAATACGTGCTTTAACTATTATACTTTGATAGCAAATAATAGAAAAATGATAAAATTTACAAGAGTAAAAATCAAATGAGAGGTTTTGAAATAGTATATATTATAGCTAATTGAAGAGTACAAAATAATATTTGTTGTAGCAAGAGATGATTTTTATAGTTTGGATGATTATTGTGGATTAGAGTTAAACAAACATGACCAAAAGTGAAATTTGCTTCCACATTTTTACTAGTTGAGTAAGTAATTATTTGAGATTCATAAGTAGTGTGAGAAGATATATTGTAGGCGTAGCTACAAAATTTAAATTCAGCTTTAAGGAAGTTATTAACTTAGTCTTATTAGATTAAACTCATCTTGTCACATGGATAAGAAATAGTAAAGAGGATCAAACTGGCTATCCTTAATAATTGCAAACTACTACCTGATATGAACATGAGAGATCACCTGCATAATTTCTCACAGGGTGCAGGGAATGTGTACACAATGCAAGTAATACATTCACCATGGATGAGACTCTCGGCCGTGCACGAGTAAAGGTTCAGTATGGAGACAATGATAAAAAAATTCAGGTAAATGAGAGTAAATCAGTAGAGATAAAACTCAAAAGAACACCAAACAGCGTCATTTTTGTTTCATTCTTATAGGTTTCAGTAGAATCATGTCCTGTGAATTGCATATATTGGGTAGAAAAGGAGGAACTGGAAGTGTTGGAGTATTTGATGCAGCCACTGCCCAAGAAAGGATATGGCGTGTTTGGAGGTGGCTGGGAAATTCCAGCCAATGTGTTTATGGCGGCCAAGGCCTTCACCAAGCAGCTGGAACGGCAAGAACAGGACACAAAATATGGTGAGTTTTCCATTGGGTTCATTGTGTTTTCATCCAAGTATTTGATCTAATTAAAGGGTAGATTACGAATTTAATCTAAGAAAGAATTTTGAATTTAGTACCTATGGTTTAATAGCTGTCTCATAAATAGCTCCTACCCGTTAGGAGAGTTTTATTAAAACATAAGGACTAAATTCAAATTATAAATTATAAGAATCAAATTTACATTTTAACCGATAATTAAGATTCGGTTTGGTAACTATTTTGTTTCTTGTTTTTGTTTTTGAAAATTAAGTCTATAAACATTATTTTCACGATATATACTTTTCACTAATGATTAAAAGATTTAAATCCAAATTTGTAATCTTTTTATTTGATATATACTTTTCACTAATGGTTAAAAGATCTAAATCCAAATTTGTAACTACAAAAAGTAGCATCTCAATGCTTGCTTATGTTTTTAAAATTTGGCTAAGAATTTAGCCATAATATTTTAGATGCAAATCAAGGTAAGAAAATGAAAAGAAAATAAACTTAATTTTTTTTTAAAAAAAAGAAAAGTTACATAGTCAAACTATTATTTCTTCAACTAAAATTGATGATCTCTAATTGTTGTTTCAAATTAGTGATACAATTAAGTTGACAGTTTATGATATCCTATCAACTAAAACTCGATAATTATTTCACTATACATACATACAGGAGCTGAAACTGTGGGAGAAACTCCAGCTCAAGCTGAGGCTCGAGCTAATGCCACCATGAAAATACAAAGGGAGAAGTTTCATGGAGTGTGGAATTGGGTAAAGCAAGTTTTTAGTGATAGGTAG ATGGCTATCTCTATTGTTCCATCTATCCATCACTCAATGCCGCCAATTGCTTCTTCTCCATCTCTTCCGCATCCTAAGGATCATAACAAGCACATCTTAAGAATCTTGGTCGGAAGGAGGCAGAGATTGACGTCAATTAGATGCAGCGCAAGTGAAAGAGTAAACGAAATGAACTATTACGAGCTTCTTGGAGTTTCTGCAGATTCAAATACTCAAGAAATCAAAGAAGCATACCGAAAGTTGCAGAAGAAATTTCATCCTGATATTGCAGGCCAAGAGGGCCACGAGTATACACTGAGACTGAATGAGGCTTATGGGGTTCTGATGAGAGAGGATCGAAGGAAGCAATATGACACTTACACGGGTGGGATGAGGGTCAGATTTGGGAATTTTGGCACCGGATTAGGTTACAGTTCGTGGAATGGACCTCTGAGACCTCAGGCTTTGTTTGTCGATGGGAATGCATGCATAGGGTGCAGGGAATGTGTACACAATGCAAGTAATACATTCACCATGGATGAGACTCTCGGCCGTGCACGAGTAAAGGTTCAGTATGGAGACAATGATAAAAAAATTCAGGTTTCAGTAGAATCATGTCCTGTGAATTGCATATATTGGGTAGAAAAGGAGGAACTGGAAGTGTTGGAGTATTTGATGCAGCCACTGCCCAAGAAAGGATATGGCGTGTTTGGAGGTGGCTGGGAAATTCCAGCCAATGTGTTTATGGCGGCCAAGGCCTTCACCAAGCAGCTGGAACGGCAAGAACAGGACACAAAATATGGAGCTGAAACTGTGGGAGAAACTCCAGCTCAAGCTGAGGCTCGAGCTAATGCCACCATGAAAATACAAAGGGAGAAGTTTCATGGAGTGTGGAATTGGGTAAAGCAAGTTTTTAGTGATAGGTAG ATGGCTATCTCTATTGTTCCATCTATCCATCACTCAATGCCGCCAATTGCTTCTTCTCCATCTCTTCCGCATCCTAAGGATCATAACAAGCACATCTTAAGAATCTTGGTCGGAAGGAGGCAGAGATTGACGTCAATTAGATGCAGCGCAAGTGAAAGAGTAAACGAAATGAACTATTACGAGCTTCTTGGAGTTTCTGCAGATTCAAATACTCAAGAAATCAAAGAAGCATACCGAAAGTTGCAGAAGAAATTTCATCCTGATATTGCAGGCCAAGAGGGCCACGAGTATACACTGAGACTGAATGAGGCTTATGGGGTTCTGATGAGAGAGGATCGAAGGAAGCAATATGACACTTACACGGGTGGGATGAGGGTCAGATTTGGGAATTTTGGCACCGGATTAGGTTACAGTTCGTGGAATGGACCTCTGAGACCTCAGGCTTTGTTTGTCGATGGGAATGCATGCATAGGGTGCAGGGAATGTGTACACAATGCAAGTAATACATTCACCATGGATGAGACTCTCGGCCGTGCACGAGTAAAGGTTCAGTATGGAGACAATGATAAAAAAATTCAGGTTTCAGTAGAATCATGTCCTGTGAATTGCATATATTGGGTAGAAAAGGAGGAACTGGAAGTGTTGGAGTATTTGATGCAGCCACTGCCCAAGAAAGGATATGGCGTGTTTGGAGGTGGCTGGGAAATTCCAGCCAATGTGTTTATGGCGGCCAAGGCCTTCACCAAGCAGCTGGAACGGCAAGAACAGGACACAAAATATGGAGCTGAAACTGTGGGAGAAACTCCAGCTCAAGCTGAGGCTCGAGCTAATGCCACCATGAAAATACAAAGGGAGAAGTTTCATGGAGTGTGGAATTGGGTAAAGCAAGTTTTTAGTGATAGGTAG MAISIVPSIHHSMPPIASSPSLPHPKDHNKHILRILVGRRQRLTSIRCSASERVNEMNYYELLGVSADSNTQEIKEAYRKLQKKFHPDIAGQEGHEYTLRLNEAYGVLMREDRRKQYDTYTGGMRVRFGNFGTGLGYSSWNGPLRPQALFVDGNACIGCRECVHNASNTFTMDETLGRARVKVQYGDNDKKIQVSVESCPVNCIYWVEKEELEVLEYLMQPLPKKGYGVFGGGWEIPANVFMAAKAFTKQLERQEQDTKYGAETVGETPAQAEARANATMKIQREKFHGVWNWVKQVFSDR
BLAST of CsGy5G017940 vs. NCBI nr
Match: XP_004142792.1 (PREDICTED: uncharacterized protein LOC101222804 [Cucumis sativus] >KGN51371.1 hypothetical protein Csa_5G523160 [Cucumis sativus]) HSP 1 Score: 620.9 bits (1600), Expect = 2.2e-174 Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0
BLAST of CsGy5G017940 vs. NCBI nr
Match: XP_008458792.1 (PREDICTED: uncharacterized protein LOC103498094 isoform X2 [Cucumis melo]) HSP 1 Score: 541.6 bits (1394), Expect = 1.7e-150 Identity = 274/343 (79.88%), Postives = 283/343 (82.51%), Query Frame = 0
BLAST of CsGy5G017940 vs. NCBI nr
Match: XP_008458791.1 (PREDICTED: uncharacterized protein LOC103498094 isoform X1 [Cucumis melo]) HSP 1 Score: 539.7 bits (1389), Expect = 6.5e-150 Identity = 274/348 (78.74%), Postives = 283/348 (81.32%), Query Frame = 0
BLAST of CsGy5G017940 vs. NCBI nr
Match: XP_008458794.1 (PREDICTED: chaperone protein DnaJ-like isoform X3 [Cucumis melo]) HSP 1 Score: 489.6 bits (1259), Expect = 7.7e-135 Identity = 234/245 (95.51%), Postives = 239/245 (97.55%), Query Frame = 0
BLAST of CsGy5G017940 vs. NCBI nr
Match: XP_022134498.1 (chaperone protein dnaJ C76, chloroplastic-like [Momordica charantia]) HSP 1 Score: 483.4 bits (1243), Expect = 5.5e-133 Identity = 241/300 (80.33%), Postives = 264/300 (88.00%), Query Frame = 0
BLAST of CsGy5G017940 vs. TAIR10
Match: AT5G23240.1 (DNAJ heat shock N-terminal domain-containing protein) HSP 1 Score: 150.2 bits (378), Expect = 2.0e-36 Identity = 95/249 (38.15%), Postives = 133/249 (53.41%), Query Frame = 0
BLAST of CsGy5G017940 vs. TAIR10
Match: AT2G42750.1 (DNAJ heat shock N-terminal domain-containing protein) HSP 1 Score: 93.2 bits (230), Expect = 2.9e-19 Identity = 65/213 (30.52%), Postives = 103/213 (48.36%), Query Frame = 0
BLAST of CsGy5G017940 vs. TAIR10
Match: AT3G05345.1 (Chaperone DnaJ-domain superfamily protein) HSP 1 Score: 64.3 bits (155), Expect = 1.5e-10 Identity = 48/174 (27.59%), Postives = 78/174 (44.83%), Query Frame = 0
BLAST of CsGy5G017940 vs. TAIR10
Match: AT4G09350.1 (Chaperone DnaJ-domain superfamily protein) HSP 1 Score: 57.0 bits (136), Expect = 2.3e-08 Identity = 27/64 (42.19%), Postives = 41/64 (64.06%), Query Frame = 0
BLAST of CsGy5G017940 vs. TAIR10
Match: AT1G80030.1 (Molecular chaperone Hsp40/DnaJ family protein) HSP 1 Score: 55.5 bits (132), Expect = 6.8e-08 Identity = 28/64 (43.75%), Postives = 40/64 (62.50%), Query Frame = 0
BLAST of CsGy5G017940 vs. Swiss-Prot
Match: sp|Q9FMX6|DJC76_ARATH (Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DJC76 PE=2 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 3.6e-35 Identity = 95/249 (38.15%), Postives = 133/249 (53.41%), Query Frame = 0
BLAST of CsGy5G017940 vs. Swiss-Prot
Match: sp|B9DNJ9|DNAJ_STACT (Chaperone protein DnaJ OS=Staphylococcus carnosus (strain TM300) OX=396513 GN=dnaJ PE=3 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 6.3e-11 Identity = 34/64 (53.12%), Postives = 47/64 (73.44%), Query Frame = 0
BLAST of CsGy5G017940 vs. Swiss-Prot
Match: sp|Q8DWH2|DNAJ_STRMU (Chaperone protein DnaJ OS=Streptococcus mutans serotype c (strain ATCC 700610 / UA159) OX=210007 GN=dnaJ PE=3 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 6.3e-11 Identity = 38/88 (43.18%), Postives = 52/88 (59.09%), Query Frame = 0
BLAST of CsGy5G017940 vs. Swiss-Prot
Match: sp|Q75VW3|DNAJ_HYDTT (Chaperone protein DnaJ OS=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) OX=608538 GN=dnaJ PE=3 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 8.2e-11 Identity = 32/62 (51.61%), Postives = 46/62 (74.19%), Query Frame = 0
BLAST of CsGy5G017940 vs. Swiss-Prot
Match: sp|P71500|DNAJ_MYCCT (Chaperone protein DnaJ OS=Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) OX=340047 GN=dnaJ PE=3 SV=2) HSP 1 Score: 69.3 bits (168), Expect = 8.2e-11 Identity = 37/87 (42.53%), Postives = 57/87 (65.52%), Query Frame = 0
BLAST of CsGy5G017940 vs. TrEMBL
Match: tr|A0A0A0KUF2|A0A0A0KUF2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G523160 PE=4 SV=1) HSP 1 Score: 620.9 bits (1600), Expect = 1.5e-174 Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0
BLAST of CsGy5G017940 vs. TrEMBL
Match: tr|A0A1S3C990|A0A1S3C990_CUCME (uncharacterized protein LOC103498094 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498094 PE=4 SV=1) HSP 1 Score: 541.6 bits (1394), Expect = 1.1e-150 Identity = 274/343 (79.88%), Postives = 283/343 (82.51%), Query Frame = 0
BLAST of CsGy5G017940 vs. TrEMBL
Match: tr|A0A1S3C8N6|A0A1S3C8N6_CUCME (uncharacterized protein LOC103498094 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498094 PE=4 SV=1) HSP 1 Score: 539.7 bits (1389), Expect = 4.3e-150 Identity = 274/348 (78.74%), Postives = 283/348 (81.32%), Query Frame = 0
BLAST of CsGy5G017940 vs. TrEMBL
Match: tr|A0A1S3C878|A0A1S3C878_CUCME (chaperone protein DnaJ-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103498094 PE=4 SV=1) HSP 1 Score: 489.6 bits (1259), Expect = 5.1e-135 Identity = 234/245 (95.51%), Postives = 239/245 (97.55%), Query Frame = 0
BLAST of CsGy5G017940 vs. TrEMBL
Match: tr|D7T0C2|D7T0C2_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_19s0177g00280 PE=4 SV=1) HSP 1 Score: 370.2 bits (949), Expect = 4.5e-99 Identity = 186/297 (62.63%), Postives = 227/297 (76.43%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |