CsGy5G016260 (gene) Cucumber (Gy14) v2

NameCsGy5G016260
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionHydrolase, hydrolyzing O-glycosyl compounds, putative
LocationChr5 : 22596850 .. 22597266 (+)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACCATCCTCTTAGTGGTGAGTGCGTGCGAATGAACAAAAAGTACCAACTAGGAGTTAGTAGCTGCAAGACATCAAATCGTTGGAGTCACGAACAAGATGGCACTCCAATTAAGTTGGCAGGATCTATATTGTGTTTGCAAGCTGTAGGAGATGGACTCCCTCCAATTCTATCTAAAGACTGCTCAAGCCAACAAAGTGCATGGAAATATGCTTCAAATGCTAAGCTTCAACTGGCCACTGTTGATGAAGAAGGACAAGCCTTGTGTTTGCAAAGGGCTTCTCATTCCCATCAAATTTTGACTAACAAATGCATGTGTCCTAATGATTCTGAATGCCAAGGAGATCCACAAAGTCAATGGTTTACACTTGTACATCAAATGTACATCTCAATTAATTTATGTACAAAATTGTAA

mRNA sequence

ATGTACCATCCTCTTAGTGGTGAGTGCGTGCGAATGAACAAAAAGTACCAACTAGGAGTTAGTAGCTGCAAGACATCAAATCGTTGGAGTCACGAACAAGATGGCACTCCAATTAAGTTGGCAGGATCTATATTGTGTTTGCAAGCTGTAGGAGATGGACTCCCTCCAATTCTATCTAAAGACTGCTCAAGCCAACAAAGTGCATGGAAATATGCTTCAAATGCTAAGCTTCAACTGGCCACTGTTGATGAAGAAGGACAAGCCTTGTGTTTGCAAAGGGCTTCTCATTCCCATCAAATTTTGACTAACAAATGCATGTGTCCTAATGATTCTGAATGCCAAGGAGATCCACAAAGTCAATGGTTTACACTTGTACATCAAATGTACATCTCAATTAATTTATGTACAAAATTGTAA

Coding sequence (CDS)

ATGTACCATCCTCTTAGTGGTGAGTGCGTGCGAATGAACAAAAAGTACCAACTAGGAGTTAGTAGCTGCAAGACATCAAATCGTTGGAGTCACGAACAAGATGGCACTCCAATTAAGTTGGCAGGATCTATATTGTGTTTGCAAGCTGTAGGAGATGGACTCCCTCCAATTCTATCTAAAGACTGCTCAAGCCAACAAAGTGCATGGAAATATGCTTCAAATGCTAAGCTTCAACTGGCCACTGTTGATGAAGAAGGACAAGCCTTGTGTTTGCAAAGGGCTTCTCATTCCCATCAAATTTTGACTAACAAATGCATGTGTCCTAATGATTCTGAATGCCAAGGAGATCCACAAAGTCAATGGTTTACACTTGTACATCAAATGTACATCTCAATTAATTTATGTACAAAATTGTAA

Protein sequence

MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLAGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQILTNKCMCPNDSECQGDPQSQWFTLVHQMYISINLCTKL
BLAST of CsGy5G016260 vs. NCBI nr
Match: XP_008459280.1 (PREDICTED: uncharacterized protein LOC103498458 [Cucumis melo])

HSP 1 Score: 240.7 bits (613), Expect = 2.9e-60
Identity = 109/125 (87.20%), Postives = 118/125 (94.40%), Query Frame = 0

Query: 1   MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLAGSILCLQAVGDGLPPILSK 60
           MYHPLSG C+RMNKKYQLG+SSCKTSNRWSHEQDG PIKLAGSILCL+A+G GLPPILS+
Sbjct: 587 MYHPLSGGCMRMNKKYQLGISSCKTSNRWSHEQDGAPIKLAGSILCLKAIGVGLPPILSQ 646

Query: 61  DCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQILTNKCMCPNDSECQGDPQSQ 120
           DCSSQQS WKY SNAKLQLATVDE+GQALCLQRASHSHQI+TNKC+C NDS+CQ DPQSQ
Sbjct: 647 DCSSQQSIWKYGSNAKLQLATVDEQGQALCLQRASHSHQIVTNKCLCSNDSQCQEDPQSQ 706

Query: 121 WFTLV 126
           WFTLV
Sbjct: 707 WFTLV 711

BLAST of CsGy5G016260 vs. NCBI nr
Match: XP_008467257.1 (PREDICTED: endoglucanase-like [Cucumis melo])

HSP 1 Score: 238.8 bits (608), Expect = 1.1e-59
Identity = 109/125 (87.20%), Postives = 118/125 (94.40%), Query Frame = 0

Query: 1   MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLAGSILCLQAVGDGLPPILSK 60
           MYHPLSG CVRMNKKYQLG+SSCKTSNRWSHEQDG PIKLAGSILCL+A+G GLPPILS+
Sbjct: 407 MYHPLSGGCVRMNKKYQLGISSCKTSNRWSHEQDGAPIKLAGSILCLKAIGVGLPPILSQ 466

Query: 61  DCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQILTNKCMCPNDSECQGDPQSQ 120
           DCSSQQS W+YASNAKLQLATVDE+GQALCLQRASHSHQI+TNKC+C  DS+CQ DPQSQ
Sbjct: 467 DCSSQQSIWRYASNAKLQLATVDEQGQALCLQRASHSHQIVTNKCLCTIDSQCQEDPQSQ 526

Query: 121 WFTLV 126
           WFTLV
Sbjct: 527 WFTLV 531

BLAST of CsGy5G016260 vs. NCBI nr
Match: KGN57438.1 (hypothetical protein Csa_3G185670 [Cucumis sativus])

HSP 1 Score: 234.6 bits (597), Expect = 2.1e-58
Identity = 109/113 (96.46%), Postives = 112/113 (99.12%), Query Frame = 0

Query: 1   MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLAGSILCLQAVGDGLPPILSK 60
           MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQD TPIKLAGSILCLQAVGDGLPPILSK
Sbjct: 315 MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDDTPIKLAGSILCLQAVGDGLPPILSK 374

Query: 61  DCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQILTNKCMCPNDSEC 114
           DCSSQQSAWKYASNAKLQLATVDE+GQALCLQRASHSHQILTNKC+CPNDS+C
Sbjct: 375 DCSSQQSAWKYASNAKLQLATVDEQGQALCLQRASHSHQILTNKCICPNDSDC 427

BLAST of CsGy5G016260 vs. NCBI nr
Match: XP_011652778.1 (PREDICTED: uncharacterized protein LOC105435091 [Cucumis sativus])

HSP 1 Score: 234.6 bits (597), Expect = 2.1e-58
Identity = 109/113 (96.46%), Postives = 112/113 (99.12%), Query Frame = 0

Query: 1   MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLAGSILCLQAVGDGLPPILSK 60
           MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQD TPIKLAGSILCLQAVGDGLPPILSK
Sbjct: 497 MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDDTPIKLAGSILCLQAVGDGLPPILSK 556

Query: 61  DCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQILTNKCMCPNDSEC 114
           DCSSQQSAWKYASNAKLQLATVDE+GQALCLQRASHSHQILTNKC+CPNDS+C
Sbjct: 557 DCSSQQSAWKYASNAKLQLATVDEQGQALCLQRASHSHQILTNKCICPNDSDC 609

BLAST of CsGy5G016260 vs. NCBI nr
Match: KGN50395.1 (hypothetical protein Csa_5G171770 [Cucumis sativus])

HSP 1 Score: 230.7 bits (587), Expect = 3.0e-57
Identity = 106/126 (84.13%), Postives = 117/126 (92.86%), Query Frame = 0

Query: 1   MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLAGSILCLQAVGDGLPPILSK 60
           MYHPLSG CVRMNKKYQLG+SSCKTSNRW HEQD +PIKLAGS+LCL+A+G GLPPILS+
Sbjct: 406 MYHPLSGGCVRMNKKYQLGISSCKTSNRWIHEQDSSPIKLAGSVLCLKAIGVGLPPILSQ 465

Query: 61  DCSSQQSAWKYASNAKLQLATVDEEGQALCLQR-ASHSHQILTNKCMCPNDSECQGDPQS 120
           DCSSQQS WKY S+AKLQLATVDE+GQALCLQR ASHSHQI+TNKC+C NDS+CQ DPQS
Sbjct: 466 DCSSQQSIWKYGSSAKLQLATVDEQGQALCLQRAASHSHQIVTNKCLCSNDSQCQEDPQS 525

Query: 121 QWFTLV 126
           QWFTLV
Sbjct: 526 QWFTLV 531

BLAST of CsGy5G016260 vs. TAIR10
Match: AT3G26130.1 (Cellulase (glycosyl hydrolase family 5) protein)

HSP 1 Score: 77.0 bits (188), Expect = 1.0e-14
Identity = 45/127 (35.43%), Postives = 66/127 (51.97%), Query Frame = 0

Query: 1   MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLAGSILCLQAVGDGLPPILSK 60
           M+HP +G C+     +QL + SC  S  W              ILCL+A   G    L  
Sbjct: 398 MFHPSTGLCIVRKSLFQLKLGSCNRSESWRLSSHRVLSLAEEQILCLKAYEKGKSVKLRL 457

Query: 61  DCS-SQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQILTNKCMC-PNDSECQGDPQ 120
             S S  S WK  S++K+QL+++ + G ++CL   + ++ I+TN C C   +S C  DP+
Sbjct: 458 FFSESYCSKWKLFSDSKMQLSSITKNGFSVCLDVDTENNNIVTNSCKCLRGNSSC--DPR 517

Query: 121 SQWFTLV 126
           SQWF LV
Sbjct: 518 SQWFKLV 522

BLAST of CsGy5G016260 vs. Swiss-Prot
Match: sp|C0HLA0|GH5FP_CHAOB (Glycosyl hydrolase 5 family protein OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 7.3e-15
Identity = 48/134 (35.82%), Postives = 77/134 (57.46%), Query Frame = 0

Query: 1   MYHPLSGECVRMNKKYQLGVSSCKT-SNRWSHEQD-GTPIKLAGSILCLQAVGDGLPPIL 60
           +YHP SG CV       + + SC++  +RW+++     PI L GS  C+   G+GLP I+
Sbjct: 412 IYHPASGLCVESGIGNTVHLGSCQSVRSRWNYDASVKGPIGLMGSSSCISTQGNGLPAIM 471

Query: 61  SKDCSS-QQSAWKYASNAKLQLAT----VDEEGQALCLQRASHSHQILTNKCMCPNDSEC 120
           +++CS+   + W   S+A+LQL T     D + + +CL   S S  I TN+C+C  DS C
Sbjct: 472 TENCSAPNNTLWSTVSSAQLQLGTRVLGKDGKEKWMCLD-GSKSPLISTNECICITDSHC 531

Query: 121 --QGDPQSQWFTLV 126
             + +P+ QWF ++
Sbjct: 532 YPKLNPEKQWFKVI 544

BLAST of CsGy5G016260 vs. TrEMBL
Match: tr|A0A1S3C9U1|A0A1S3C9U1_CUCME (uncharacterized protein LOC103498458 OS=Cucumis melo OX=3656 GN=LOC103498458 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 1.9e-60
Identity = 109/125 (87.20%), Postives = 118/125 (94.40%), Query Frame = 0

Query: 1   MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLAGSILCLQAVGDGLPPILSK 60
           MYHPLSG C+RMNKKYQLG+SSCKTSNRWSHEQDG PIKLAGSILCL+A+G GLPPILS+
Sbjct: 587 MYHPLSGGCMRMNKKYQLGISSCKTSNRWSHEQDGAPIKLAGSILCLKAIGVGLPPILSQ 646

Query: 61  DCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQILTNKCMCPNDSECQGDPQSQ 120
           DCSSQQS WKY SNAKLQLATVDE+GQALCLQRASHSHQI+TNKC+C NDS+CQ DPQSQ
Sbjct: 647 DCSSQQSIWKYGSNAKLQLATVDEQGQALCLQRASHSHQIVTNKCLCSNDSQCQEDPQSQ 706

Query: 121 WFTLV 126
           WFTLV
Sbjct: 707 WFTLV 711

BLAST of CsGy5G016260 vs. TrEMBL
Match: tr|A0A1S3CT43|A0A1S3CT43_CUCME (endoglucanase-like OS=Cucumis melo OX=3656 GN=LOC103504654 PE=3 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 7.2e-60
Identity = 109/125 (87.20%), Postives = 118/125 (94.40%), Query Frame = 0

Query: 1   MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLAGSILCLQAVGDGLPPILSK 60
           MYHPLSG CVRMNKKYQLG+SSCKTSNRWSHEQDG PIKLAGSILCL+A+G GLPPILS+
Sbjct: 407 MYHPLSGGCVRMNKKYQLGISSCKTSNRWSHEQDGAPIKLAGSILCLKAIGVGLPPILSQ 466

Query: 61  DCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQILTNKCMCPNDSECQGDPQSQ 120
           DCSSQQS W+YASNAKLQLATVDE+GQALCLQRASHSHQI+TNKC+C  DS+CQ DPQSQ
Sbjct: 467 DCSSQQSIWRYASNAKLQLATVDEQGQALCLQRASHSHQIVTNKCLCTIDSQCQEDPQSQ 526

Query: 121 WFTLV 126
           WFTLV
Sbjct: 527 WFTLV 531

BLAST of CsGy5G016260 vs. TrEMBL
Match: tr|A0A0A0L6S7|A0A0A0L6S7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G185670 PE=3 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 1.4e-58
Identity = 109/113 (96.46%), Postives = 112/113 (99.12%), Query Frame = 0

Query: 1   MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLAGSILCLQAVGDGLPPILSK 60
           MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQD TPIKLAGSILCLQAVGDGLPPILSK
Sbjct: 315 MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDDTPIKLAGSILCLQAVGDGLPPILSK 374

Query: 61  DCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQILTNKCMCPNDSEC 114
           DCSSQQSAWKYASNAKLQLATVDE+GQALCLQRASHSHQILTNKC+CPNDS+C
Sbjct: 375 DCSSQQSAWKYASNAKLQLATVDEQGQALCLQRASHSHQILTNKCICPNDSDC 427

BLAST of CsGy5G016260 vs. TrEMBL
Match: tr|A0A0A0KL32|A0A0A0KL32_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G171770 PE=3 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 2.0e-57
Identity = 106/126 (84.13%), Postives = 117/126 (92.86%), Query Frame = 0

Query: 1   MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLAGSILCLQAVGDGLPPILSK 60
           MYHPLSG CVRMNKKYQLG+SSCKTSNRW HEQD +PIKLAGS+LCL+A+G GLPPILS+
Sbjct: 406 MYHPLSGGCVRMNKKYQLGISSCKTSNRWIHEQDSSPIKLAGSVLCLKAIGVGLPPILSQ 465

Query: 61  DCSSQQSAWKYASNAKLQLATVDEEGQALCLQR-ASHSHQILTNKCMCPNDSECQGDPQS 120
           DCSSQQS WKY S+AKLQLATVDE+GQALCLQR ASHSHQI+TNKC+C NDS+CQ DPQS
Sbjct: 466 DCSSQQSIWKYGSSAKLQLATVDEQGQALCLQRAASHSHQIVTNKCLCSNDSQCQEDPQS 525

Query: 121 QWFTLV 126
           QWFTLV
Sbjct: 526 QWFTLV 531

BLAST of CsGy5G016260 vs. TrEMBL
Match: tr|A0A0A0KNB6|A0A0A0KNB6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G171760 PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 4.4e-57
Identity = 104/126 (82.54%), Postives = 117/126 (92.86%), Query Frame = 0

Query: 1   MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLAGSILCLQAVGDGLPPILSK 60
           MYHPLSG CVRMNKKYQLG+SSCKTSNRW HEQD +PIKLAGS+LCL+A+G GLPPILS+
Sbjct: 406 MYHPLSGGCVRMNKKYQLGISSCKTSNRWIHEQDSSPIKLAGSVLCLKAIGVGLPPILSQ 465

Query: 61  DCSSQQSAWKYASNAKLQLATVDEEGQALCLQR-ASHSHQILTNKCMCPNDSECQGDPQS 120
           DCSSQQS WKY SNAKLQLAT+DE+GQALCLQR ASHSHQ++TNKC+C +DS+CQ DPQS
Sbjct: 466 DCSSQQSIWKYGSNAKLQLATIDEQGQALCLQRAASHSHQLVTNKCLCSSDSQCQEDPQS 525

Query: 121 QWFTLV 126
           QWFTLV
Sbjct: 526 QWFTLV 531

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008459280.12.9e-6087.20PREDICTED: uncharacterized protein LOC103498458 [Cucumis melo][more]
XP_008467257.11.1e-5987.20PREDICTED: endoglucanase-like [Cucumis melo][more]
KGN57438.12.1e-5896.46hypothetical protein Csa_3G185670 [Cucumis sativus][more]
XP_011652778.12.1e-5896.46PREDICTED: uncharacterized protein LOC105435091 [Cucumis sativus][more]
KGN50395.13.0e-5784.13hypothetical protein Csa_5G171770 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
AT3G26130.11.0e-1435.43Cellulase (glycosyl hydrolase family 5) protein[more]
Match NameE-valueIdentityDescription
sp|C0HLA0|GH5FP_CHAOB7.3e-1535.82Glycosyl hydrolase 5 family protein OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
tr|A0A1S3C9U1|A0A1S3C9U1_CUCME1.9e-6087.20uncharacterized protein LOC103498458 OS=Cucumis melo OX=3656 GN=LOC103498458 PE=... [more]
tr|A0A1S3CT43|A0A1S3CT43_CUCME7.2e-6087.20endoglucanase-like OS=Cucumis melo OX=3656 GN=LOC103504654 PE=3 SV=1[more]
tr|A0A0A0L6S7|A0A0A0L6S7_CUCSA1.4e-5896.46Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G185670 PE=3 SV=1[more]
tr|A0A0A0KL32|A0A0A0KL32_CUCSA2.0e-5784.13Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G171770 PE=3 SV=1[more]
tr|A0A0A0KNB6|A0A0A0KNB6_CUCSA4.4e-5782.54Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G171760 PE=3 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR035992Ricin_B-like_lectins
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G016260.1CsGy5G016260.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31263:SF10SUBFAMILY NOT NAMEDcoord: 1..127
NoneNo IPR availablePANTHERPTHR31263FAMILY NOT NAMEDcoord: 1..127
IPR035992Ricin B-like lectinsSUPERFAMILYSSF50370Ricin B-like lectinscoord: 4..105

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None