CsGy5G016260 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTACCATCCTCTTAGTGGTGAGTGCGTGCGAATGAACAAAAAGTACCAACTAGGAGTTAGTAGCTGCAAGACATCAAATCGTTGGAGTCACGAACAAGATGGCACTCCAATTAAGTTGGCAGGATCTATATTGTGTTTGCAAGCTGTAGGAGATGGACTCCCTCCAATTCTATCTAAAGACTGCTCAAGCCAACAAAGTGCATGGAAATATGCTTCAAATGCTAAGCTTCAACTGGCCACTGTTGATGAAGAAGGACAAGCCTTGTGTTTGCAAAGGGCTTCTCATTCCCATCAAATTTTGACTAACAAATGCATGTGTCCTAATGATTCTGAATGCCAAGGAGATCCACAAAGTCAATGGTTTACACTTGTACATCAAATGTACATCTCAATTAATTTATGTACAAAATTGTAA ATGTACCATCCTCTTAGTGGTGAGTGCGTGCGAATGAACAAAAAGTACCAACTAGGAGTTAGTAGCTGCAAGACATCAAATCGTTGGAGTCACGAACAAGATGGCACTCCAATTAAGTTGGCAGGATCTATATTGTGTTTGCAAGCTGTAGGAGATGGACTCCCTCCAATTCTATCTAAAGACTGCTCAAGCCAACAAAGTGCATGGAAATATGCTTCAAATGCTAAGCTTCAACTGGCCACTGTTGATGAAGAAGGACAAGCCTTGTGTTTGCAAAGGGCTTCTCATTCCCATCAAATTTTGACTAACAAATGCATGTGTCCTAATGATTCTGAATGCCAAGGAGATCCACAAAGTCAATGGTTTACACTTGTACATCAAATGTACATCTCAATTAATTTATGTACAAAATTGTAA ATGTACCATCCTCTTAGTGGTGAGTGCGTGCGAATGAACAAAAAGTACCAACTAGGAGTTAGTAGCTGCAAGACATCAAATCGTTGGAGTCACGAACAAGATGGCACTCCAATTAAGTTGGCAGGATCTATATTGTGTTTGCAAGCTGTAGGAGATGGACTCCCTCCAATTCTATCTAAAGACTGCTCAAGCCAACAAAGTGCATGGAAATATGCTTCAAATGCTAAGCTTCAACTGGCCACTGTTGATGAAGAAGGACAAGCCTTGTGTTTGCAAAGGGCTTCTCATTCCCATCAAATTTTGACTAACAAATGCATGTGTCCTAATGATTCTGAATGCCAAGGAGATCCACAAAGTCAATGGTTTACACTTGTACATCAAATGTACATCTCAATTAATTTATGTACAAAATTGTAA MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLAGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQILTNKCMCPNDSECQGDPQSQWFTLVHQMYISINLCTKL
BLAST of CsGy5G016260 vs. NCBI nr
Match: XP_008459280.1 (PREDICTED: uncharacterized protein LOC103498458 [Cucumis melo]) HSP 1 Score: 240.7 bits (613), Expect = 2.9e-60 Identity = 109/125 (87.20%), Postives = 118/125 (94.40%), Query Frame = 0
BLAST of CsGy5G016260 vs. NCBI nr
Match: XP_008467257.1 (PREDICTED: endoglucanase-like [Cucumis melo]) HSP 1 Score: 238.8 bits (608), Expect = 1.1e-59 Identity = 109/125 (87.20%), Postives = 118/125 (94.40%), Query Frame = 0
BLAST of CsGy5G016260 vs. NCBI nr
Match: KGN57438.1 (hypothetical protein Csa_3G185670 [Cucumis sativus]) HSP 1 Score: 234.6 bits (597), Expect = 2.1e-58 Identity = 109/113 (96.46%), Postives = 112/113 (99.12%), Query Frame = 0
BLAST of CsGy5G016260 vs. NCBI nr
Match: XP_011652778.1 (PREDICTED: uncharacterized protein LOC105435091 [Cucumis sativus]) HSP 1 Score: 234.6 bits (597), Expect = 2.1e-58 Identity = 109/113 (96.46%), Postives = 112/113 (99.12%), Query Frame = 0
BLAST of CsGy5G016260 vs. NCBI nr
Match: KGN50395.1 (hypothetical protein Csa_5G171770 [Cucumis sativus]) HSP 1 Score: 230.7 bits (587), Expect = 3.0e-57 Identity = 106/126 (84.13%), Postives = 117/126 (92.86%), Query Frame = 0
BLAST of CsGy5G016260 vs. TAIR10
Match: AT3G26130.1 (Cellulase (glycosyl hydrolase family 5) protein) HSP 1 Score: 77.0 bits (188), Expect = 1.0e-14 Identity = 45/127 (35.43%), Postives = 66/127 (51.97%), Query Frame = 0
BLAST of CsGy5G016260 vs. Swiss-Prot
Match: sp|C0HLA0|GH5FP_CHAOB (Glycosyl hydrolase 5 family protein OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 7.3e-15 Identity = 48/134 (35.82%), Postives = 77/134 (57.46%), Query Frame = 0
BLAST of CsGy5G016260 vs. TrEMBL
Match: tr|A0A1S3C9U1|A0A1S3C9U1_CUCME (uncharacterized protein LOC103498458 OS=Cucumis melo OX=3656 GN=LOC103498458 PE=4 SV=1) HSP 1 Score: 240.7 bits (613), Expect = 1.9e-60 Identity = 109/125 (87.20%), Postives = 118/125 (94.40%), Query Frame = 0
BLAST of CsGy5G016260 vs. TrEMBL
Match: tr|A0A1S3CT43|A0A1S3CT43_CUCME (endoglucanase-like OS=Cucumis melo OX=3656 GN=LOC103504654 PE=3 SV=1) HSP 1 Score: 238.8 bits (608), Expect = 7.2e-60 Identity = 109/125 (87.20%), Postives = 118/125 (94.40%), Query Frame = 0
BLAST of CsGy5G016260 vs. TrEMBL
Match: tr|A0A0A0L6S7|A0A0A0L6S7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G185670 PE=3 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 1.4e-58 Identity = 109/113 (96.46%), Postives = 112/113 (99.12%), Query Frame = 0
BLAST of CsGy5G016260 vs. TrEMBL
Match: tr|A0A0A0KL32|A0A0A0KL32_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G171770 PE=3 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 2.0e-57 Identity = 106/126 (84.13%), Postives = 117/126 (92.86%), Query Frame = 0
BLAST of CsGy5G016260 vs. TrEMBL
Match: tr|A0A0A0KNB6|A0A0A0KNB6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G171760 PE=3 SV=1) HSP 1 Score: 229.6 bits (584), Expect = 4.4e-57 Identity = 104/126 (82.54%), Postives = 117/126 (92.86%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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