CsGy5G015090 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy5G015090
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Histone deacetylase
Location	Chr5 : 20996525 .. 21004125 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCCAAGTCAGGGCCCTATGAACTCTAAGCTAAATTATGATCCACAAAGTCAGGACCCTTAAGTTTGGGACCATAGCTATTAACGCCCAGAAATCAGGCTAAAATCTTATAACATGAAGCTTAAAAGACCAAGGGAATATTCTTCACTAGAGATTTTTTAAATCTTTTGCTGTGAGAAAAACACTAAATCATTTCCACTCTCCCCCTCTTGTAGCTAGTTGGAATATGTCAATTATCATTTCCAACCTGCAGTTATTAGATCATGATTTATTTTTAAAGATACTTGGTGATTATGTTTTTAACAAAATGTATCCAGATTTCGTGTGAATGTGGAATGGACAAAGAAAACATCTATTACCTACTGATCCAACCTTACAGTCGTTGCCTTGCTCATTCTAGTTCTCTTCAATGGTGTTTCCCATTTCTATAGTTACTCATAGATCTGAGTTGCTACCTTTTGGTAGCTGTGTAGGATCCATCATTGGTCAATACATCTATTGTCATCTATATTACCCTTTTATCTTCTCTTGGTAGTTGGTTTAAGTTGTTATACTTGACGGGGAGTGTTAGGATGACAAACAAATTTCCACATTAGCTTGGAAAGGTCCCACATTGGCTAAGGTAGAGAAAGATCGATATTATACAAGTAAGGACAATTATTTTCATTGGTATGAAGCTTTTCAGTTTTACCAATCGGAAATTCTATATGAAAATATCATATATGTAACCTATCACATGATAATTTAGCACTAATGTTTTTATTTGGAGCATTGCAATTGGCATGATGAGATTTTGATACTGTTGGCAATGCAGACATTTAATGAATCACTAGTTACAGCTGGAGCAAGAATTTCTTTAGTTGATTCAGTGGTGATTTCTCAACCCAGCACGTTAGTCACTTCTTAATGATAATTTTTTAACTTTTGTATGTTATCCCATATATTTAGCCAAACTGCCAATTTGGAGGGAGATTCTAAGCTTTCTACTTTTAAGCATTGAGACGTTAGATTTTAATTCATATTTCCAATCATTCACAGATGCATAAGTACTTAAAGTTTCATATTTGTTATACTTGGTTTCAGATCAAAGCGTCACAAATCTACAAGAATTCACCAATTGATTTTGCATTAATAAGGCCTCTAGAACATCGTGTTGTCCCCAAGGGATCGATGGGATTCTGTGTTTATTGGGAACATGGCTATTGCACCTTGTTATGCTCGACTTGAACCCATAATGATGAAGTAAAAGAATCGTACGAAAGTTTCGTTGGAACATTTTAAATGAATACAGTTCTTTATTTCTTTTTTATATTATAATTTTGAAGATTTTCATTATAATTATTATTGTAGATTTTGTTGAAATGTGAATTACATAGGCAAACTACTTATATAAATGTGTACATGGTTATAATATGATTTTACAATATTATTTGCAAAATAAAATTGTAAAATAAAAAAAGTTCATTAACATTAAAATTGATGAATCATGCTCTAATAAAAACAAAATACTTTCAATAACGTATATAAAAATATCTGTAGAACATCTTTCATAATGTTTTTTTATTGCTATAAAAACTTTTTATAGTACTTTTTAAAATATAATGGAATGTTTCTATAACATTGAATTAAAGCTACTATATATTAACTTTCCATGGTGCTATTCATAGCTCTACAAAAACGCTATGAAATGACAAATATATTCAATAACATTGATTACGACATCATATACAAAATGCTACAAAAATAATTTTATAGCGTTTTTCAATATCATTAAAAATGCTATTGAAACGTTTTGATAGCGCTTTTCCATCGCAATAAAAAAATGCTAGAAAAGTTTTTTAATAGCGCTTTTCTTTCATGCTATGGAAAGTCTTTATGGCAACAAATATGTGCTATCACAACCAGTTTTTTATAGCATTGTAAAAACGCTATGGAAAAGTCATGAACTTTCAATAACATTGGCTACGACAGCATTTCGAAAATGTTATCGAAAGTCTACGATAACTTTTGTTTTAGGCTTCATAACTAAAATTTCTTGTAGTGTGGAGGCAGTCAAGCGTCAATTTACTGCCCTTTCTTTAATATTTTGTCTTTCTTTTTATTTGATTTCTAATTTCTAGTTTTTACATTATAATAAACTAAGATTTTTTTTTCTTTTTACAAGAATAAAATTTTGCCCAAAGACACTTTGCATACACGGAGGAGTTAATGCTTTCTTCATGCAAGCTTTCCATTAAGCAAACATCAAGATACATCTAGGGGAGTACACCATTCCCTTTTCTTTTCTCTTCCTCTTTACTTTGCTCTTCAAAAGCTTGAGGACGAAGCAAATTTTTAAGTGGGGGGTGGATAACATGTTTCTTGATACTTAGCTTGCATGTGTATGAATTTGGGGTACCTTTTTCAAATATTATTAAATTTTTTCACAAAAATTGCAAATCTTCCCAACCCTTGTGCTGAGCTAAAAAATATATATATAAATAAAGGATGTAATATGCATTAAAGAAAAAAGCTCGTAAAAAAGTGAGAAGTCAGGTAGGTCAAGTAATTGTGTTGAGTTCCCTAACTATTAGAATTTTTGGGAAAAAAACTTCACTTTTGACCTAAGTAAAATTAGACAATCTTCTCTTAGTGTTCTAAACATAACATTTAGTTGGACGAGGACTTTGGAAAGAGGAGGAATCCTTTCCGATTTAGAAGTAGGGAGAAAACGAGTATAAGGTATTTTAAATCTTTTCATAGCATGTCGAGCATCCGAGTAGCAAAACTTGAGTGTCTTTCTAAAATGTGGTTGTTCTACACGAACTTAGTTAAACCCAAACCTCAATCGATAATTTGTAATCTCTTTGATAATTTGAACTAGGTTTAAGCATAGGTTTGGATGGACTGTTAAGAAATTAAGTCAACTAGGTGTCAAGTTCTATTGGATTCAAGATAGTCCATTTCATCATTGATTGCTTCTTACCATAAGTTGACATCTACTGAGGATAAGGTTTCTATTAGATCTTTTGGATCTTCTACATTATACATTTCAAAGTCTTCTCCAAAGTCCTTTATGGTTCTAGATCTCTTGCTTCTTCTAGGTTCAGGATCTACTTCATTGTTTTCTTTGTTTAAATCCTAATTGAAAGTAGACTACTTGAACTTGAGCCCCCACTAGTTTGAATATTTAAGCTCCCACTATTTCTAGATTTAAAGGAAATCTATCCTCGAAAAAATCTATGTCATTTGATTCTATGATTACTTTGTTTTCTAAGTCATAGAACTTATAGGTCTTATTATTTTCAGCATATCCTATGAAAACAAATTCGTAAGCTCTACTGGCTAATTTTCTTCTCTGTGGATCAAGTATTCTAACATAGGCTAGACAATCCCAAGTTCTAAGATAAGACAGGTTTGGTGTTTTATTCTTAAGGACTTTGCATGGCGAGGATTTACTATTTGATTTAGGAATCCTATCAAGAAAATAATTAATAGTCTTAATTATTTCACCCCACAAAGATGGTGTTGCTTCTGATTCAAGTAAGATAGCAACTACTAACTCCGTTAGTGTTCTATTTTTCTTTTATGCTTTTCCATTTATTTCAGGAGAATATGGTGCAGTACTTTCATGTATTATTCCTTTTGAGTTATAAAACTCATTGAAGGCAACTAAATCATATTATGTTCCTCTATCACTACGAAGTCTCTTAATTCTTTTGTTTAATTGATTCTCTATTTCAGTTACATACACCTTGAACATGTCAAAGGCATCACTTTTATCTTTAAGTAGATAAATAAAAGTGTAGTCGGAAGAGTCATCTATAAAGGTTATTACATACCTTTTACTGTTCCTAGTTAATGTGCCATCAAATTCACATAAGTCAGAATGTATTAATTCTAAAGGCTTTGTTACTCTATTTATAGACTTATGTGAGGTTTTTGTTATCTTAGCTTGACTACAACATGCACATTTCTCAAATTCATGCATAGATAACTTAGGTATGAGATTTAATCTACTCATGTTGCTAATTAGTCTTTTATTAATATGACAAAGTCTAGCATGCCAAACATTAAAAGAAGATAACATGTGAGCGAAAGTTAAATTCTTATTCGTTTCTAAATTTACTTTAAACATGCCTTCTGTCACGCAGCCCTTTCCCACAAAACATTGTTCTTAGTTAAAGTAAATAAATATGACCCTATAGTTTACAAGAAGCTAGCTTTGTTGAGGAGATATCCAGAGATCAAATTCTTTCGAATTTCAGTCCTGTGAAGAACTTCCTTTAACACAAGCATTTTGCCAGATGTGAATTTCCGTTCTACTTTTTTAATGCCTGCCGCCTGAGTCATGTGATGATCTCCTAGAAGGATATTCTTATCCTTTATCTCATTATACTTTCTAAATAAATTAAGGTCATGACTGACATGGCGAGATGCACCTGTGTCTAGCCACCAACCTTCTGATCCCCCAATGACATTAACTTCAGAAATCATAGCTACATATTCATCTCCTACCAGGTTTGCCTACGCAGTAGGACAATTTACGTTTCTACAATTTCTAGCTAAAGTGTCCAGCCTTATTACAATTGTAGCAAATAATTTGTACTGTACTTCTGGACTAGGGTCTTTGCGAATTTCTTTGCTTGTTGGATCCACATTTTATTTTATTTCCTTTAGGCTTCAGATCCAGTTTCAGCATTGCGTTTGACTTCTTTCTAGAAATTGTGTTCCCCTCTTCTTTTTGGTCAGTCTTCTCGCCTCTTCCTCAATCCTTAATCGTGTGATGAGACTTTTCAGCGAGAACTCCTTGGTTTTGTGTCTTATAGTATTTTTGAAATCCTTCCACAGAGGAGGTAATTTATCAATAATAACCGCAACTTGAAATTGATTGTGAAGCGGCATATCTTCGTTTATGATTTCATGTGTTATCTTTTAAATCACATACTATTGATCCTTCCACTGATCTATCATTAGTGATTTGATAACGCAAGTATCGACTTTCTGCATACTTCTTAGATTCAGCTTCCTCAATGTCATACTTCTTTTGTAACGCATCCCAAACTTCTTTCGCGGTAGACATTACGCTGTAATAATCATACAACTCATTAGTAAGACCATTAAGTATTAAATTCTTACATATAAAATTGTTCTCTGTCCACGCGATATGAGTTTTGACTTTCTCTTCAAATGGATTGGAGTCTGAGATTTTTTGCTCTGTAGAGGTACATGCGGTAGCCACCTTCTTCAAAGTAAGAAAAAACAGCATCTTTTGTTTCCACCTCTTAAAATTTTCTCCTTCAAAGAGAAAAGGATGGTTGAGGTCAGAGGAACTCAAATCGCCTTGTAATGATCCGGCCATTGCAGCAGATCGAAACGTCTTAAAATTGTTCTTGCACTTCGCCCTATATCTCACTTAAGATACCGTTTACTCAAGTCGCATATTGATTATCTCGTCAAGTGGTCAAAATGCAAAGCTAGAAAACAAAGAATTGTTAAGTAATGACTGAGTCATGGATCACACTCTCTTTAAAACGTTTCACGACACTGTTTCTTTATGCAAACAAAATTATTGTCTCGTCGTCCCTAGGATAAAACAGTCTTTGTTCTTCAATTGATTTTACACAAAATCAATTGGAATCTCAAAACAGTCTTTGTTCTTCAATTGCTCGATAAACTCAAAAGGAGAAGTTTGAGAGAGTTTTTTTTTTCTTATGAAAATTTTTCGCTGATATAATGAAAGAATGATGAAAGTGTGTATATAGTGTGAGGGAATCCATAGACTGTTAGAAATTATTTTTGGAAAATTAATTTTGTAGCCTTTTTATTTATGGAGAGATTATGTTGACTTATTAAATACAAAACGATAATAAAATGTTTGATTCTTTTAGATATGAAATAAAGATCATGACATTAATATATCCCATGCATCATGCTTGACCATCTCTCCTAGGATGTTAACATATGCGATGAGATATTCTAACCTTTCACATAGCTATCTCGCATAACTCATGTTATCGCATAGTCACGATCAATATTACATAGTTGAAAATTACAACACGAAAGACTCAAGTTTTCATTCACATAACATTTGAAACATAGCTATATCGCATAGCTTAGTCTTCTTGCATCGCATAAATAATTAGCATTTAAAACATAGCTATATCGCATAGCTTGGTCTTCTCACATAAAGAATTTTTCATTCAACAGTTAAGGTACATAACAACAATGGAAATTCATATACCGAAACATTAGAGAGTGATTAAATCCAACCCTTGTTAGCTAGCATATCAAACAATGAATTACAAGTTCTAGGTGCAAAAGAGAAGGAAATTTCTTTAAATAACCAAGAGAGGTCCAAAATTTTCGTTAGCCAGTAGGAACTTTCTCCTCTTGTTAAAACTTTCCTGTTGATTAGATTCATGGTTTCTAAACTATAAATTCAACTATAAGTTTAGGAATGCCTAGATTGACAGCTGGTGCTGTAAACAAACACTCATGAAAGACTAACTTGTTCTTATTCGTCTATTTTCTTGGATACAAAAGTATCTACAGTGAGAAGCGTGTAGTTGTAAGTCTTCAATGGAGTGTACATATAGTTAACAACATATAGTTAATGAGCTTAGCCAATTAATCTCATATCTTTGGATCTTCTAATCTGTTGGTCCATTTAGGTCATTTTCCTATGTCTGCCAGAGTATTGAGGTTATTATTCCCTAAATCAAGTACTTAAGAAAATGTAGATTATAATACATGTATTATTTTAAACCCTAAATCTTGTAGTTTTAAATACCACCATTTTTTCTAATTTTTTTTTTAAATCACTGTTTTTTTTCCCAAATCACTCATGTAGTATTGAGGTTCCTATGTCGGCAAGAAAACGTTGTTGTTGTTGCTATTATTGTTAAAAATAAAGGTAATAGGAGATGGAAGGATAAATTGAAGGACATGATATAAATCAATAATAAATCAATTGTGTAATTAAAGAATAGAAAGTAAAATATTTTTTTAATTTTATGAAAAAATAATTTTTTTACATGGATTTTGTTATTTTAAAATTTTATAATAATAATAATAAAGATAACAATAATATGGATAATAATAATAATAATATAAATTAAATGAGGTCCGCTAACGCCGTTCTTTTCCTTGTTTTCCATGGCGGAAGAGAGAAAATTTGAAAAAAAATAAAAAAGACGCATTTTAATAATGTCCAAAAAATTACCGCTTTTATCAAAATAGTTTTTGAGTTTTTTTTTTAAAAATCACTCTTTTTTAAAAATCACACTGTCCATTTGAAAATTCCGATCTCATAATTGACTTTTGCTTTATTCCCTTTCTTTATTCTCTTCTCTTTCTTCTGCCCTATAACTCTGCATGTCTCTCCCGAAGAAGACCAATGAAAATCATTTTCTTTCTTTACATTTAGTTAGTTCTCTCTCTCTCTTCTATAACCCTTTTCTCTCCCAAACTCAAATCTTCTCTTAATAATTTCTTGCCCTATCACTTCTTTGTTTTCATATATGATTGGTTGCTTTTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTGTTTTCAGTTTTTGAGTTTAGGGTAA

mRNA sequence

ATGGAGCCAAGTCAGGGCCCTATGAACTCTAAGCTAAATTATGATCCACAAACTGGAGCAAGAATTTCTTTAGTTGATTCAGTGATCAAAGCGTCACAAATCTACAAGAATTCACCAATTGATTTTGCATTAATAAGGCCTCTAGAACATCGTGTTGTCCCCAAGGGATCGATGGGATTCTGTTTTTTGAGTTTAGGGTAA

Coding sequence (CDS)

ATGGAGCCAAGTCAGGGCCCTATGAACTCTAAGCTAAATTATGATCCACAAACTGGAGCAAGAATTTCTTTAGTTGATTCAGTGATCAAAGCGTCACAAATCTACAAGAATTCACCAATTGATTTTGCATTAATAAGGCCTCTAGAACATCGTGTTGTCCCCAAGGGATCGATGGGATTCTGTTTTTTGAGTTTAGGGTAA

Protein sequence

MEPSQGPMNSKLNYDPQTGARISLVDSVIKASQIYKNSPIDFALIRPLEHRVVPKGSMGFCFLSLG

Homology

[Close]

BLAST of CsGy5G015090 vs. NCBI nr
Match: XP_022949835.1 (histone deacetylase 14 [Cucurbita moschata])

HSP 1 Score: 68.2 bits (165), Expect = 1.2e-08
Identity = 32/43 (74.42%), Postives = 34/43 (79.07%), Query Frame = 0


Query: 19  GARISLVDSVIKASQIYKNSPIDFALIRPLEHRVVPKGSMGFC 62
           GA ISLVDSV+KAS+ YKN PI FALIRP  H  VPKG MGFC
Sbjct: 189 GAGISLVDSVVKASKTYKNPPIGFALIRPPGHHAVPKGPMGFC 231

[Close]

BLAST of CsGy5G015090 vs. NCBI nr
Match: XP_022977964.1 (histone deacetylase 14 [Cucurbita maxima])

HSP 1 Score: 68.2 bits (165), Expect = 1.2e-08
Identity = 32/43 (74.42%), Postives = 34/43 (79.07%), Query Frame = 0


Query: 19  GARISLVDSVIKASQIYKNSPIDFALIRPLEHRVVPKGSMGFC 62
           GA ISLVDSV+KAS+ YKN PI FALIRP  H  VPKG MGFC
Sbjct: 189 GAGISLVDSVVKASKTYKNPPIGFALIRPPGHHAVPKGPMGFC 231

[Close]

BLAST of CsGy5G015090 vs. NCBI nr
Match: XP_023545004.1 (histone deacetylase 14 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 68.2 bits (165), Expect = 1.2e-08
Identity = 32/43 (74.42%), Postives = 34/43 (79.07%), Query Frame = 0


Query: 19  GARISLVDSVIKASQIYKNSPIDFALIRPLEHRVVPKGSMGFC 62
           GA ISLVDSV+KAS+ YKN PI FALIRP  H  VPKG MGFC
Sbjct: 189 GAGISLVDSVVKASKTYKNPPIGFALIRPPGHHAVPKGPMGFC 231

[Close]

BLAST of CsGy5G015090 vs. NCBI nr
Match: XP_004148663.1 (PREDICTED: histone deacetylase 14 isoform X1 [Cucumis sativus] >XP_011657746.1 PREDICTED: histone deacetylase 14 isoform X1 [Cucumis sativus] >KGN48344.1 hypothetical protein Csa_6G483260 [Cucumis sativus])

HSP 1 Score: 67.8 bits (164), Expect = 1.6e-08
Identity = 32/43 (74.42%), Postives = 34/43 (79.07%), Query Frame = 0


Query: 19  GARISLVDSVIKASQIYKNSPIDFALIRPLEHRVVPKGSMGFC 62
           GA ISLVDSV+KASQ +KN PI FALIRP  H  VPKG MGFC
Sbjct: 189 GAGISLVDSVVKASQTHKNPPIGFALIRPPGHHAVPKGPMGFC 231

[Close]

BLAST of CsGy5G015090 vs. NCBI nr
Match: XP_008441062.1 (PREDICTED: histone deacetylase 14 isoform X1 [Cucumis melo])

HSP 1 Score: 67.8 bits (164), Expect = 1.6e-08
Identity = 32/43 (74.42%), Postives = 34/43 (79.07%), Query Frame = 0


Query: 19  GARISLVDSVIKASQIYKNSPIDFALIRPLEHRVVPKGSMGFC 62
           GA ISLVDSV+KASQ +KN PI FALIRP  H  VPKG MGFC
Sbjct: 201 GAGISLVDSVVKASQTHKNPPIGFALIRPPGHHAVPKGPMGFC 243

[Close]

BLAST of CsGy5G015090 vs. TAIR10
Match: AT4G33470.1 (histone deacetylase 14)

HSP 1 Score: 55.1 bits (131), Expect = 1.9e-08
Identity = 27/43 (62.79%), Postives = 31/43 (72.09%), Query Frame = 0


Query: 19  GARISLVDSVIKASQIYKNSPIDFALIRPLEHRVVPKGSMGFC 62
           GA ++LVDSVI AS+   + PI FALIRP  H  VPKG MGFC
Sbjct: 170 GAGMALVDSVIAASRNSVDPPIGFALIRPPGHHAVPKGPMGFC 212

[Close]

BLAST of CsGy5G015090 vs. Swiss-Prot
Match: sp|Q941D6|HDA14_ARATH (Histone deacetylase 14 OS=Arabidopsis thaliana OX=3702 GN=HDA14 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 3.5e-07
Identity = 27/43 (62.79%), Postives = 31/43 (72.09%), Query Frame = 0


Query: 19  GARISLVDSVIKASQIYKNSPIDFALIRPLEHRVVPKGSMGFC 62
           GA ++LVDSVI AS+   + PI FALIRP  H  VPKG MGFC
Sbjct: 170 GAGMALVDSVIAASRNSVDPPIGFALIRPPGHHAVPKGPMGFC 212

[Close]

BLAST of CsGy5G015090 vs. TrEMBL
Match: tr|A0A1S3B3B9|A0A1S3B3B9_CUCME (Histone deacetylase OS=Cucumis melo OX=3656 GN=LOC103485288 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.1e-08
Identity = 32/43 (74.42%), Postives = 34/43 (79.07%), Query Frame = 0


Query: 19  GARISLVDSVIKASQIYKNSPIDFALIRPLEHRVVPKGSMGFC 62
           GA ISLVDSV+KASQ +KN PI FALIRP  H  VPKG MGFC
Sbjct: 201 GAGISLVDSVVKASQTHKNPPIGFALIRPPGHHAVPKGPMGFC 243

[Close]

BLAST of CsGy5G015090 vs. TrEMBL
Match: tr|A0A0A0KHP9|A0A0A0KHP9_CUCSA (Histone deacetylase OS=Cucumis sativus OX=3659 GN=Csa_6G483260 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.1e-08
Identity = 32/43 (74.42%), Postives = 34/43 (79.07%), Query Frame = 0


Query: 19  GARISLVDSVIKASQIYKNSPIDFALIRPLEHRVVPKGSMGFC 62
           GA ISLVDSV+KASQ +KN PI FALIRP  H  VPKG MGFC
Sbjct: 189 GAGISLVDSVVKASQTHKNPPIGFALIRPPGHHAVPKGPMGFC 231

[Close]

BLAST of CsGy5G015090 vs. TrEMBL
Match: tr|A0A2G5DDX3|A0A2G5DDX3_AQUCA (Histone deacetylase OS=Aquilegia coerulea OX=218851 GN=AQUCO_02200270v1 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.2e-07
Identity = 28/43 (65.12%), Postives = 35/43 (81.40%), Query Frame = 0


Query: 19  GARISLVDSVIKASQIYKNSPIDFALIRPLEHRVVPKGSMGFC 62
           GA ISL+DSV+++S+I KNSP+ FALIRP  H  +PKG MGFC
Sbjct: 187 GAGISLIDSVVESSKIRKNSPLGFALIRPPGHHAIPKGPMGFC 229

[Close]

BLAST of CsGy5G015090 vs. TrEMBL
Match: tr|W9QLS5|W9QLS5_9ROSA (Histone deacetylase OS=Morus notabilis OX=981085 GN=L484_020688 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 3.4e-07
Identity = 28/43 (65.12%), Postives = 34/43 (79.07%), Query Frame = 0


Query: 19  GARISLVDSVIKASQIYKNSPIDFALIRPLEHRVVPKGSMGFC 62
           GA ISLVDSV++AS++ +N PI FALIRP  H  +PKG MGFC
Sbjct: 195 GAGISLVDSVVEASKLSQNQPIGFALIRPPGHHAIPKGPMGFC 237

[Close]

BLAST of CsGy5G015090 vs. TrEMBL
Match: tr|A0A2G3CMB7|A0A2G3CMB7_CAPCH (Histone deacetylase OS=Capsicum chinense OX=80379 GN=BC332_11023 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 5.8e-07
Identity = 27/43 (62.79%), Postives = 34/43 (79.07%), Query Frame = 0


Query: 19  GARISLVDSVIKASQIYKNSPIDFALIRPLEHRVVPKGSMGFC 62
           GA ISLVDSV+ AS++ K+ P+ FALIRP  H  +PKG+MGFC
Sbjct: 188 GAGISLVDSVVAASKVSKDPPVGFALIRPPGHHAIPKGAMGFC 230

The following BLAST results are available for this feature:

BLAST of CsGy5G015090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949835.1	1.2e-08	74.42	histone deacetylase 14 [Cucurbita moschata]	[more]
XP_022977964.1	1.2e-08	74.42	histone deacetylase 14 [Cucurbita maxima]	[more]
XP_023545004.1	1.2e-08	74.42	histone deacetylase 14 [Cucurbita pepo subsp. pepo]	[more]
XP_004148663.1	1.6e-08	74.42	PREDICTED: histone deacetylase 14 isoform X1 [Cucumis sativus] >XP_011657746.1 P...	[more]
XP_008441062.1	1.6e-08	74.42	PREDICTED: histone deacetylase 14 isoform X1 [Cucumis melo]	[more]

BLAST of CsGy5G015090 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G33470.1	1.9e-08	62.79	histone deacetylase 14	[more]

BLAST of CsGy5G015090 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q941D6\|HDA14_ARATH	3.5e-07	62.79	Histone deacetylase 14 OS=Arabidopsis thaliana OX=3702 GN=HDA14 PE=1 SV=1	[more]

BLAST of CsGy5G015090 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B3B9\|A0A1S3B3B9_CUCME	1.1e-08	74.42	Histone deacetylase OS=Cucumis melo OX=3656 GN=LOC103485288 PE=4 SV=1	[more]
tr\|A0A0A0KHP9\|A0A0A0KHP9_CUCSA	1.1e-08	74.42	Histone deacetylase OS=Cucumis sativus OX=3659 GN=Csa_6G483260 PE=4 SV=1	[more]
tr\|A0A2G5DDX3\|A0A2G5DDX3_AQUCA	1.2e-07	65.12	Histone deacetylase OS=Aquilegia coerulea OX=218851 GN=AQUCO_02200270v1 PE=4 SV=...	[more]
tr\|W9QLS5\|W9QLS5_9ROSA	3.4e-07	65.12	Histone deacetylase OS=Morus notabilis OX=981085 GN=L484_020688 PE=4 SV=1	[more]
tr\|A0A2G3CMB7\|A0A2G3CMB7_CAPCH	5.8e-07	62.79	Histone deacetylase OS=Capsicum chinense OX=80379 GN=BC332_11023 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070932	histone H3 deacetylation
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0032041	NAD-dependent histone deacetylase activity (H3-K14 specific)

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G015090.1	CsGy5G015090.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy5G015090	Cucurbita maxima (Rimu)	cgybcmaB600
CsGy5G015090	Cucurbita maxima (Rimu)	cgybcmaB676
CsGy5G015090	Cucurbita moschata (Rifu)	cgybcmoB574
CsGy5G015090	Cucurbita moschata (Rifu)	cgybcmoB654
CsGy5G015090	Cucurbita pepo (Zucchini)	cgybcpeB609
CsGy5G015090	Cucurbita pepo (Zucchini)	cgybcpeB650
CsGy5G015090	Cucumber (Chinese Long) v2	cgybcuB223
CsGy5G015090	Bottle gourd (USVL1VR-Ls)	cgyblsiB302
CsGy5G015090	Melon (DHL92) v3.5.1	cgybmeB294
CsGy5G015090	Melon (DHL92) v3.6.1	cgybmedB294
CsGy5G015090	Watermelon (Charleston Gray)	cgybwcgB342
CsGy5G015090	Watermelon (97103) v1	cgybwmB391
CsGy5G015090	Wild cucumber (PI 183967)	cgybcpiB225
CsGy5G015090	Silver-seed gourd	carcgybB0533
CsGy5G015090	Silver-seed gourd	carcgybB0819
CsGy5G015090	Cucumber (Chinese Long) v3	cgybcucB232
CsGy5G015090	Watermelon (97103) v2	cgybwmbB328
CsGy5G015090	Wax gourd	cgybwgoB428