CsGy5G014430 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTTTCATCAATTTGAGCAATACAACAGAGTTCACAATAAATATTGAAAACCATATGAACTTGAGTTTACACAAAAGCAAGCCCAAGCATAGTTCATCAAAGAATGTGGGAACACAAAGGGAGGAATATCATTTGACCCCACAAAATGGTCTTCTTAGAAGTTCTACGGTGCTTCTGAATGGAAAAGCATTGGAGCTTACAAATGAAGGAGAAGTGCCAGATCTTACACCTGTCTACAGAGACAGTAACTCTTCCATAAGTATTCCTAATTGGTCTATTGCTTTCATTGTCATCCCTGACTTTGTAGCTATTGGTTGCAACTGA ATGCTTTTCATCAATTTGAGCAATACAACAGAGTTCACAATAAATATTGAAAACCATATGAACTTGAGTTTACACAAAAGCAAGCCCAAGCATAGTTCATCAAAGAATGTGGGAACACAAAGGGAGGAATATCATTTGACCCCACAAAATGGTCTTCTTAGAAGTTCTACGGTGCTTCTGAATGGAAAAGCATTGGAGCTTACAAATGAAGGAGAAGTGCCAGATCTTACACCTGTCTACAGAGACAGTAACTCTTCCATAAGTATTCCTAATTGGTCTATTGCTTTCATTGTCATCCCTGACTTTGTAGCTATTGGTTGCAACTGA ATGCTTTTCATCAATTTGAGCAATACAACAGAGTTCACAATAAATATTGAAAACCATATGAACTTGAGTTTACACAAAAGCAAGCCCAAGCATAGTTCATCAAAGAATGTGGGAACACAAAGGGAGGAATATCATTTGACCCCACAAAATGGTCTTCTTAGAAGTTCTACGGTGCTTCTGAATGGAAAAGCATTGGAGCTTACAAATGAAGGAGAAGTGCCAGATCTTACACCTGTCTACAGAGACAGTAACTCTTCCATAAGTATTCCTAATTGGTCTATTGCTTTCATTGTCATCCCTGACTTTGTAGCTATTGGTTGCAACTGA MLFINLSNTTEFTINIENHMNLSLHKSKPKHSSSKNVGTQREEYHLTPQNGLLRSSTVLLNGKALELTNEGEVPDLTPVYRDSNSSISIPNWSIAFIVIPDFVAIGCN
BLAST of CsGy5G014430 vs. NCBI nr
Match: XP_004140375.1 (PREDICTED: heparanase-like protein 1 [Cucumis sativus]) HSP 1 Score: 215.7 bits (548), Expect = 7.7e-53 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of CsGy5G014430 vs. NCBI nr
Match: KGN51001.1 (hypothetical protein Csa_5G390000 [Cucumis sativus]) HSP 1 Score: 215.7 bits (548), Expect = 7.7e-53 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of CsGy5G014430 vs. NCBI nr
Match: XP_004146543.1 (PREDICTED: heparanase-like protein 1 [Cucumis sativus]) HSP 1 Score: 172.6 bits (436), Expect = 7.5e-40 Identity = 87/111 (78.38%), Postives = 99/111 (89.19%), Query Frame = 0
BLAST of CsGy5G014430 vs. NCBI nr
Match: KGN53270.1 (hypothetical protein Csa_4G043860 [Cucumis sativus]) HSP 1 Score: 172.6 bits (436), Expect = 7.5e-40 Identity = 87/111 (78.38%), Postives = 99/111 (89.19%), Query Frame = 0
BLAST of CsGy5G014430 vs. NCBI nr
Match: XP_008453728.1 (PREDICTED: heparanase-like protein 1 [Cucumis melo]) HSP 1 Score: 171.4 bits (433), Expect = 1.7e-39 Identity = 90/112 (80.36%), Postives = 101/112 (90.18%), Query Frame = 0
BLAST of CsGy5G014430 vs. TAIR10
Match: AT5G07830.1 (glucuronidase 2) HSP 1 Score: 90.9 bits (224), Expect = 5.2e-19 Identity = 50/123 (40.65%), Postives = 79/123 (64.23%), Query Frame = 0
BLAST of CsGy5G014430 vs. TAIR10
Match: AT5G34940.2 (glucuronidase 3) HSP 1 Score: 70.5 bits (171), Expect = 7.3e-13 Identity = 43/116 (37.07%), Postives = 67/116 (57.76%), Query Frame = 0
BLAST of CsGy5G014430 vs. TAIR10
Match: AT5G61250.2 (glucuronidase 1) HSP 1 Score: 70.1 bits (170), Expect = 9.5e-13 Identity = 48/123 (39.02%), Postives = 64/123 (52.03%), Query Frame = 0
BLAST of CsGy5G014430 vs. Swiss-Prot
Match: sp|Q9FF10|HPSE1_ARATH (Heparanase-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At5g07830 PE=2 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 9.4e-18 Identity = 50/123 (40.65%), Postives = 79/123 (64.23%), Query Frame = 0
BLAST of CsGy5G014430 vs. Swiss-Prot
Match: sp|Q9FZP1|HPSE3_ARATH (Heparanase-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At5g34940 PE=2 SV=2) HSP 1 Score: 70.5 bits (171), Expect = 1.3e-11 Identity = 43/116 (37.07%), Postives = 67/116 (57.76%), Query Frame = 0
BLAST of CsGy5G014430 vs. Swiss-Prot
Match: sp|Q8L608|HPSE2_ARATH (Heparanase-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At5g61250 PE=2 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 1.7e-11 Identity = 48/123 (39.02%), Postives = 64/123 (52.03%), Query Frame = 0
BLAST of CsGy5G014430 vs. Swiss-Prot
Match: sp|Q9LRC8|BAGLU_SCUBA (Baicalin-beta-D-glucuronidase OS=Scutellaria baicalensis OX=65409 GN=SGUS PE=1 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 3.0e-08 Identity = 32/84 (38.10%), Postives = 48/84 (57.14%), Query Frame = 0
BLAST of CsGy5G014430 vs. TrEMBL
Match: tr|A0A0A0KTJ9|A0A0A0KTJ9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G390000 PE=4 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 5.1e-53 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of CsGy5G014430 vs. TrEMBL
Match: tr|A0A0A0KUF1|A0A0A0KUF1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G043860 PE=4 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 5.0e-40 Identity = 87/111 (78.38%), Postives = 99/111 (89.19%), Query Frame = 0
BLAST of CsGy5G014430 vs. TrEMBL
Match: tr|A0A1S3BWF5|A0A1S3BWF5_CUCME (heparanase-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103494371 PE=4 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.1e-39 Identity = 90/112 (80.36%), Postives = 101/112 (90.18%), Query Frame = 0
BLAST of CsGy5G014430 vs. TrEMBL
Match: tr|A0A1S3AY64|A0A1S3AY64_CUCME (heparanase-like protein 2 OS=Cucumis melo OX=3656 GN=LOC103483878 PE=4 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 1.1e-26 Identity = 67/108 (62.04%), Postives = 81/108 (75.00%), Query Frame = 0
BLAST of CsGy5G014430 vs. TrEMBL
Match: tr|A0A0A0L5V7|A0A0A0L5V7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G165650 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 5.3e-26 Identity = 65/107 (60.75%), Postives = 78/107 (72.90%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |