CsGy5G014120 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy5G014120
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Ubiquitin-fold modifier 1
Location	Chr5 : 19320085 .. 19326083 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTACCCGTAATTATATTTACAATAGAAAAGTACCGAATATCCAAAGTTGAAGGCTGTTTGGGAATTTAGCCTTATGTTTAAAACATATTTTTTCCCCCAAAATTGGACCTGTTTCTGGCAGTTTCAAAATTCGTAAGCCGTATCTATAAAATTGATACAAGAATCTCCTCCAAAAATCAACGACGTTCAATCTTCACCACATCACAGAGCTCGAAAATGGCGGGTGCTGGTGGCGGAAAGGTCTCCTTCAAAGTCACTCTCACCTCAGACCCGAAGCTCCCTTTCAAAGTGTTTGTAATCTTAATTCCTTTTTTCTTTTTTTTTGGGCTTCTAGGGTTTTTCCCTTTCCGTCCCCATTACTACTAAGACCCAATCTCATCGTTTTTCAATTTGTTTGTCTCTCAGGTTTAGTGTTCCAGAGGCCGCCCCCTTCACCGCTGTCCTCAAATTTGCCGCTGAAGAATTTAAGGTGCCCCCGCAAACCAGCGCCATCATCACTAATGGTAACTGATTGCCTCTGTTTTGATTCGATTGTGATTGGAATCTGCATGCTTGATATTTATTTGGATCTGCCGTTCACCGATACCTGTGGTTTTAGAAATGAGAATTCGCGTTGATTTCCTTAAAAGATGGTAGGCGTGCCTTCAACGCACGATGCGTAAATTCTTATTTTCTTTTTCTTAGGAACGAGTACTAGTAATTGGATGATTGAAGATTAGGCCAGTGTTAGTTTTGGAGCACAATTCTTTTTCCTCTGACCAAGAAAGTAACTAGTATTTAATGCGAAGCCTTCCCTATCAACTTTAAAATTGCTTGTGTTGCGCTTTGTTTTTTATGATAAGTTGGGTTGTGAAAGGCATCGACCTTTTGAAAGAAGCAATACAATCGACTCTCCCTAAACCCCTCACAGTCGAGAAGGTTACTCCAAACTCTAACTAACTCCCTTCCCTTTTTCACAATGCCTTTATACTCTCCTCTCCACTCATTCCCCGTGGTTCCCCTTTTACAATTGTCTTTCCCATTCTACCCTTACTCCTCTGTTGACGTTGATACAAAATTGGAAGCGTGACATTACGTCCCCCCTCCAAAACAACCTTGCCCTCAGGTGAAAAGTAGGAAATTGTTGCTGAAAATTATCAATAGCTTCCCAAGTTGCATCATGTTTTGGTAACCCCTTCTATCTGGATTTTTACTATAGCCAAACACCTCTTGTACAGTCACCCACTGAAACAACTTTGAAAATATAGGCTAGGTAGGCTGTACAACCTTTTACAGTCCTAAAGCTTTGTAAGCTGAGAAGCATGAAACACTTGATGAATAGAAGCACCCACCGACAATGCAATCGATAAGCTAACTGTTAAAACTCCTTAACCTGAAACTCAGAAAGATCTCAACAGTGCTAAAATAGTGGCAAGAACAGAGACAGTACTCTGTTCAATATATATTGCAATGATATCACCAGTTCAACAAGCCAAAATAGAGTCTAAAGAAGAACACAAATGGAAAGCAAGAACCAACAAATAAAGAAATGACCAGCTCCTTCAAGGAGGATGTCCTCTCCCTACAAGCTCACAACAACTTTTACCAAAATAGAACTTAAAATATCAATCCCCAAAACATTCTTTATTTATACTAACAGCCAACAGGACCCACAGAAATTCCCATCCTCTCAATTGGTCTCTTCCGAAGCAGCCTCAGGTACATTTCTTTTTTGCCCCTCCTTTTATAAGTATGCAGAATTGGAGGGTAGCCGGTTTGAAGTGCACCTTGTCCTCAAGGTGGGAAAAAGAACTGTTGATTCATGAGATACGATGACTCCCAGGTGGCCTCTGTCTGCTAACTTCTTCCATTTCACTAACCATTCATTGTCCCCAATTTCTCTATTCCACCATACTTCCAGTACAATTTCTGGCCTCAATTGTAACTCAAATTCTTTTGTTAAGGCTGGAGGTAAGTGCTGAATTTGCTGAGTCTGTCCCAACTTCATTTTCAATTGAGACACATGGAAAACATTGTGAATTAGTAGAGCTTCCGGTGGTAGTTCTAAGCGATAAGCCACTTCTTTTTTTTCAATGATGTGGTAAGGACCATAAAACTTTGGCGATAGCTTTTCACAATTTTTTCTAGTCAATGAACGTTGCAGATATGGTCTCAGTTTCAGGTGCACCTTATCACCCACTTGAAAGTTCCATTCCCTGTGATGTAAGTCGGCCTGTTTTTTCATCTGGTTCTGCACCACCACAAGATTATCTTTCAATGCATTAATGGTCATATCCTGATCTATGAGTAATTGTTCTGCACTATCATTTGTTGTTTTTGGGGTACCATAAGAAATTAGAGGAGGTGGAGGTCTACCATAAACCACCTGGAAAGGAGTCATTTTAGATGAAGCATGAAATGTAGTATTATACCACAACACTGCCCATGGTATACTCTTACTCCATTTCGTCGGTTGCTCATTGCAAAAACACCTTAAGTACGTTTCCAAGCATCGATTCACCCTCTCTGTTTGGCTGTCGGTTTGTGGATGATATGCTGTGCTCCTTTTTAACAAAGTACCCATTGCTGAAAATAATTCCTTCTAAAAACTGCTTAAGAAAATTTTGTCACAATAGAAGATTACAGACTTTGGGATCCCATGCTTACTTACCACCCTATAGACATCCGCACCTTGCTTGGCTGTGAATGGATGTTTAAGGACAATAAAATGGCTGAATTTACTCATTCAGTCTACCACCACCATAGTGGAATCATAACCTCCCCATTTGGGTAACCCTTCTATGAAATCCATGGTCCAATTTTCCAATATTAAATCTTTTGTATTTAAGATTATTGAAAGCAGTAAAAGAAAATAGATACCAAGTTACGTGGAAACTCGAGTACCGGGATAAAACCACGATATGTCTTTCTTATTATTATCTCATATAAACAAAAGATACGAAGGGGAAAATAAACAGACAACAAGCTTATGATAAAAATGGAAAAAAAATTAGGGTAAATCTTTCCTTGCGCCAAAGCCCACTAATTCTAACAAAGATATATAATAGTAGCCATTGTATTTGATTGGTGTAAATATTCGATTATCAAGAAGATTGTCAGCAGTTTATTATGAGAAAAATTGAATATCATCATAAAAAGTTAAAAACTACCATGTTGTTTTGGGACAATTGTTGTTATTATACTACATTTCATCCTTGATGTTAGTTGAACTTGCCTACATACATTGCGTCCTCAAATCTTTGATCATGTAATGAGACATGCTTGTGATTGTTTTCGGTTTTTATGTCAGAGAGAATTCTCTTCATGTTAGTTTCTATTACACTTACTAATATGGAAACAAAAGAGTTCCTAGAGTTTTCTTCCCAGATGAAGAAAAATCGACCCCTCTGAACTAAGATAATTTGCGACTGCTGAATGCTTGAGCCAATTAACTACAGCTTTTTTCATGATTTCACTGGTATAGTAGGGAAGGGTCAAAGATTGTGCTTAGTGTTCTAAAAATCCCTCCCAAGTATGCACCTAGGCTCAAAGCGCGGGTTTGGTGCCTTACTTGAAAAGGCAAGGTTTACAAAATAAGGTGCACCTCAAGCATGCCCCTGTTTGACGCCATAAGGTTTAAAGTCCTGGGTCTTGGGGATTTTATTATTCTTAAGAATAATAATAATTAGAGCTTTTACTTTATTAACTAAAAAAATCAAATCTAATAAGCCTAAATGCAATTTTTTTTGTGTTTAGGGGTCTTGTTTTTAGTATTTCCACTTCAACTATGCTTTCTCATCTTTATGTAGTACTTTAATATATAGTGTTCCTCGCAAAACGCCTTTTTTTTTGTGCCTTGTGCATAAGCACCAAAAGGCTGTTGCGCTTTATTGCACCTTGAGGTTTAAAAAACACTGATTGTGTTTAGAATTTGTGAACTATGAGATATGGGTAGTATTCACTGTTGTCACTAGTTATTTTAGGGGGTGTTTGGGGTAAGGAGCAAGTTATTATAGTCATAATAAATTGAGTTATAGTAGTTTGTACTTGGGGTTTAGATTATTTTAGTTTGAATTATGATAGTATGTGTTTGTGGTGTAAGATTATTTTAGTTTGAGAAAAAAATAGTAAACACTGTAGCAAATAATAAAAAAATGATAGAATGTTAAATAGTAAAATCGGAAGCCAATGGAGGGTTTTGAAATATTGTTGGATATTTTTAAATAGTATTTACTGTTGTTAGAGATGGTTATTATGGTCTTGTATAATCCTCCCCTCAAATGGCTCCTTAATATTTTAACAGAAATGACATTGTTAGGTGAGAGATGCTTTATGGATCCTCATGCACAATAGATTTGTCCTCAGATTTGAATCGTACATGTACTTTTAGATATGCTGATATACATCTCATTTCAGTCATTTAGCCTCTCATTTTATGTGACGTCTAGGCCTAACATTGTCATGTGCCTTGTAGATGGCGTTGGAATAAATCCTCAACAAAGTGCAGGTAAGCTGATTCATGGCCTTAATCCTTTACAATTTGTTGTGTCCGTACTTCTTTTCTGCTAAATTTGCATGTTATTTAAGCATCTTAACTATAGAAGCGTATGCTGAACTTGGTAAAAACTCAAGTTCTGTGTTGATCGATGGATGGATGGTATTCTGTAACTGGTGACAGGTTGGAATTTGTCTGTGATAGTGTGACGGTTTGGAATTTCTGTGATAGTATGAACCAAACTCACCACCGCTTCACTGAAACTGAGACAGAACTGTTGACATTGTTTTCTAACTCCCATCTGAAATGTTACAGGCCCCCAATTACCCCAATTATTAATATTCACGTAGCACTAGGAACTAGGAAGAAGGGGGAACGTAAATAGTGCTGAGGGGAGTTTTCATTATGGGGCCACGATATTCCAGAGTTAGTTATAGCCTAGCAAGTCCTAAGGAGTAGTGTTCGTTGAGTGAGCATGGCATTCTTTATACTGAATTGGTTATTTGAACTCTATGAATATTTCTTGGGAAAGGAGGGAATCTCTCAAATCTTCTCTTGTTTATTTTGATAAATAAAATTATTGGGCTAGGCCTATCAAAATGTCAAGTACCCTTTGAAAATCAAAATCTGATTTCTTCCCAGATTAGATACGTTTTATGTGTTTAGTTCAAAATTTTAGCCTATTCATTGATATTGCTATTTATTTATGTATGCGCATTCCTTTTACTAAACAGTCTACAACTTCTGCATGAGATACATTTCGCAAGTCAGTGAAGGTTGAGGAAAAAATATTCCATTATTTGGAGTTGAAATTTATGGTTGGATGTGCTTTTTGCAGGCAATGTCTTCCTCAAGCATGGCTCTGAACTACGCCTCATTCCTCGTGATAGGGTTGGAGCTGCCTGATCTTTGCGAATGTAAACTACAATCCCTTTGTCTACTCGTCTTAGTCAACTGGCTTAATTTGCAATCATCAAGCTGAGAGAATTTATACTTGTTTATCACATTATTCTAACTGACTAGAAACTGTCTGCTTAATTAAATAAATGAGCCTCCTTATTTCGGGACTCTTTTTAATCATTATGTACTTGAACAGAGGTACTTAGTTGGGAACAAAGTTTAGTTTCAAAGTCAGGTTAGGAGATCAGTTTTTAGGCCATTAAACCCCGCTTTTTCGGCTGGTGGGCTCCTTGAAGACCTAGATCTAAGCCTCTTTCTCTATCCACCGCTGATTCGACTAGAGAGTTTTTGGTGCTGATATTTGAGATTATTAGGTGCTAGCCAGGCGAGTTCAGATTTTGCAAGCCTTTCAATTTGGTTGTGGAAAAAGGGTTGCGTTCCAACTGGTTGTTGAAATCCCCCAATGTTTTTTACTAGGGAAAATTGCATAAACCGATCAATTATGTCTTTATAGTTTGCAATTAGACCTTTGTTTTTAAATTAATAATTTATGATGGAATGTTTTAAAATTAAAAAAGATAAATATTCTCACTTCTCTCCTCCACCTTCCCTCTCCGGCTCTTCC

mRNA sequence

CTACCCGTAATTATATTTACAATAGAAAAGTACCGAATATCCAAAGTTGAAGGCTGTTTGGGAATTTAGCCTTATGTTTAAAACATATTTTTTCCCCCAAAATTGGACCTGTTTCTGGCAGTTTCAAAATTCGTAAGCCGTATCTATAAAATTGATACAAGAATCTCCTCCAAAAATCAACGACGTTCAATCTTCACCACATCACAGAGCTCGAAAATGGCGGGTGCTGGTGGCGGAAAGGTCTCCTTCAAAGTCACTCTCACCTCAGACCCGAAGCTCCCTTTCAAAGTGTTTAGTGTTCCAGAGGCCGCCCCCTTCACCGCTGTCCTCAAATTTGCCGCTGAAGAATTTAAGGTGCCCCCGCAAACCAGCGCCATCATCACTAATGGCAATGTCTTCCTCAAGCATGGCTCTGAACTACGCCTCATTCCTCGTGATAGGGTTGGAGCTGCCTGATCTTTGCGAATGTAAACTACAATCCCTTTGTCTACTCGTCTTAGTCAACTGGCTTAATTTGCAATCATCAAGCTGAGAGAATTTATACTTGTTTATCACATTATTCTAACTGACTAGAAACTGTCTGCTTAATTAAATAAATGAGCCTCCTTATTTCGGGACTCTTTTTAATCATTATGTACTTGAACAGAGGTACTTAGTTGGGAACAAAGTTTAGTTTCAAAGTCAGGTTAGGAGATCAGTTTTTAGGCCATTAAACCCCGCTTTTTCGGCTGGTGGGCTCCTTGAAGACCTAGATCTAAGCCTCTTTCTCTATCCACCGCTGATTCGACTAGAGAGTTTTTGGTGCTGATATTTGAGATTATTAGGTGCTAGCCAGGCGAGTTCAGATTTTGCAAGCCTTTCAATTTGGTTGTGGAAAAAGGGTTGCGTTCCAACTGGTTGTTGAAATCCCCCAATGTTTTTTACTAGGGAAAATTGCATAAACCGATCAATTATGTCTTTATAGTTTGCAATTAGACCTTTGTTTTTAAATTAATAATTTATGATGGAATGTTTTAAAATTAAAAAAGATAAATATTCTCACTTCTCTCCTCCACCTTCCCTCTCCGGCTCTTCC

Coding sequence (CDS)

ATGGCGGGTGCTGGTGGCGGAAAGGTCTCCTTCAAAGTCACTCTCACCTCAGACCCGAAGCTCCCTTTCAAAGTGTTTAGTGTTCCAGAGGCCGCCCCCTTCACCGCTGTCCTCAAATTTGCCGCTGAAGAATTTAAGGTGCCCCCGCAAACCAGCGCCATCATCACTAATGGCAATGTCTTCCTCAAGCATGGCTCTGAACTACGCCTCATTCCTCGTGATAGGGTTGGAGCTGCCTGA

Protein sequence

MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNGNVFLKHGSELRLIPRDRVGAA

Homology

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BLAST of CsGy5G014120 vs. NCBI nr
Match: XP_022885098.1 (ubiquitin-fold modifier 1 isoform X2 [Olea europaea var. sylvestris])

HSP 1 Score: 152.9 bits (385), Expect = 4.5e-34
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 3  GAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNGNVFL 62
          GAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNGNVFL
Sbjct: 5  GAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNGNVFL 64

Query: 63 KHGSELRLIPRDRVGA 79
          KHGSELRLIPRDRVGA
Sbjct: 65 KHGSELRLIPRDRVGA 80

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BLAST of CsGy5G014120 vs. NCBI nr
Match: PHT58657.1 (Ubiquitin-fold modifier 1 [Capsicum baccatum])

HSP 1 Score: 152.1 bits (383), Expect = 7.7e-34
Identity = 75/78 (96.15%), Postives = 77/78 (98.72%), Query Frame = 0


Query: 2  AGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNGNVF 61
          +G GGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNGNVF
Sbjct: 3  SGGGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNGNVF 62

Query: 62 LKHGSELRLIPRDRVGAA 80
          LKHGSELRLIPRDRVGA+
Sbjct: 63 LKHGSELRLIPRDRVGAS 80

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BLAST of CsGy5G014120 vs. NCBI nr
Match: XP_011001429.1 (PREDICTED: ubiquitin-fold modifier 1 isoform X2 [Populus euphratica])

HSP 1 Score: 151.0 bits (380), Expect = 1.7e-33
Identity = 75/77 (97.40%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 2  AGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNGNVF 61
          A AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNGNVF
Sbjct: 7  AAAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNGNVF 66

Query: 62 LKHGSELRLIPRDRVGA 79
          LKHG+ELRLIPRDRVGA
Sbjct: 67 LKHGTELRLIPRDRVGA 83

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BLAST of CsGy5G014120 vs. NCBI nr
Match: KRH53194.1 (hypothetical protein GLYMA_06G110100 [Glycine max])

HSP 1 Score: 151.0 bits (380), Expect = 1.7e-33
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 4  AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNGNVFLK 63
          AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNGNVFLK
Sbjct: 2  AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNGNVFLK 61

Query: 64 HGSELRLIPRDRVGA 79
          HGSELRLIPRDRVGA
Sbjct: 62 HGSELRLIPRDRVGA 76

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BLAST of CsGy5G014120 vs. NCBI nr
Match: XP_004140331.1 (PREDICTED: ubiquitin-fold modifier 1 [Cucumis sativus] >XP_008465795.1 PREDICTED: ubiquitin-fold modifier 1 [Cucumis melo] >XP_022939161.1 ubiquitin-fold modifier 1 [Cucurbita moschata] >XP_022993821.1 ubiquitin-fold modifier 1 [Cucurbita maxima] >XP_023550471.1 ubiquitin-fold modifier 1 [Cucurbita pepo subsp. pepo] >KGN50966.1 hypothetical protein Csa_5G374760 [Cucumis sativus])

HSP 1 Score: 149.8 bits (377), Expect = 3.8e-33
Identity = 79/90 (87.78%), Postives = 79/90 (87.78%), Query Frame = 0


Query: 1  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITN--- 60
          MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITN   
Sbjct: 1  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV 60

Query: 61 --------GNVFLKHGSELRLIPRDRVGAA 80
                  GNVFLKHGSELRLIPRDRVGAA
Sbjct: 61 GINPQQSAGNVFLKHGSELRLIPRDRVGAA 90

[Close]

BLAST of CsGy5G014120 vs. TAIR10
Match: AT1G77710.1 (Ubiquitin-like, Ufm1 (InterPro:IPR005375))

HSP 1 Score: 137.9 bits (346), Expect = 2.7e-33
Identity = 73/86 (84.88%), Postives = 73/86 (84.88%), Query Frame = 0


Query: 4  AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITN------ 63
          A GGKVSFKVTLTSDPKLPFKVFSVPE APFTAVLKFAAEEFKVPPQTSAIITN      
Sbjct: 2  ATGGKVSFKVTLTSDPKLPFKVFSVPEGAPFTAVLKFAAEEFKVPPQTSAIITNDGIGIN 61

Query: 64 -----GNVFLKHGSELRLIPRDRVGA 79
               GNVFLKHGSELRLIPRDRVGA
Sbjct: 62 PQQSAGNVFLKHGSELRLIPRDRVGA 87

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BLAST of CsGy5G014120 vs. Swiss-Prot
Match: sp|Q9CA23|UFM1_ARATH (Ubiquitin-fold modifier 1 OS=Arabidopsis thaliana OX=3702 GN=At1g77710 PE=3 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 4.9e-32
Identity = 73/86 (84.88%), Postives = 73/86 (84.88%), Query Frame = 0


Query: 4  AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITN------ 63
          A GGKVSFKVTLTSDPKLPFKVFSVPE APFTAVLKFAAEEFKVPPQTSAIITN      
Sbjct: 2  ATGGKVSFKVTLTSDPKLPFKVFSVPEGAPFTAVLKFAAEEFKVPPQTSAIITNDGIGIN 61

Query: 64 -----GNVFLKHGSELRLIPRDRVGA 79
               GNVFLKHGSELRLIPRDRVGA
Sbjct: 62 PQQSAGNVFLKHGSELRLIPRDRVGA 87

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BLAST of CsGy5G014120 vs. Swiss-Prot
Match: sp|Q94DM8|UFM1_ORYSJ (Ubiquitin-fold modifier 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0962400 PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 3.5e-30
Identity = 69/82 (84.15%), Postives = 70/82 (85.37%), Query Frame = 0


Query: 8  KVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITN---------- 67
          KVSFK+ LTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITN          
Sbjct: 16 KVSFKIILTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQS 75

Query: 68 -GNVFLKHGSELRLIPRDRVGA 79
           GNVFLKHGSELRLIPRDRVGA
Sbjct: 76 AGNVFLKHGSELRLIPRDRVGA 97

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BLAST of CsGy5G014120 vs. Swiss-Prot
Match: sp|Q5PU89|UFM1_CHLIN (Ubiquitin-fold modifier 1 OS=Chlamydomonas incerta OX=51695 GN=PR46a PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.9e-28
Identity = 67/86 (77.91%), Postives = 70/86 (81.40%), Query Frame = 0


Query: 5  GGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITN------- 64
          G  KV+FKVTLTSDPKLPF+VFSVPE APFTAVLKFAAEEFKVP QTSAIITN       
Sbjct: 10 GVTKVTFKVTLTSDPKLPFRVFSVPEEAPFTAVLKFAAEEFKVPAQTSAIITNDGVGINP 69

Query: 65 ----GNVFLKHGSELRLIPRDRVGAA 80
              GNVFLKHGSELRLIPRDRVG +
Sbjct: 70 QQTAGNVFLKHGSELRLIPRDRVGGS 95

[Close]

BLAST of CsGy5G014120 vs. Swiss-Prot
Match: sp|Q94EY2|UFM1_CHLRE (Ubiquitin-fold modifier 1 OS=Chlamydomonas reinhardtii OX=3055 GN=PR46a PE=3 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 2.5e-28
Identity = 66/81 (81.48%), Postives = 68/81 (83.95%), Query Frame = 0


Query: 8  KVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITN---------- 67
          KV+FKVTLTSDPKLPF+VFSVPE APFTAVLKFAAEEFKVP QTSAIITN          
Sbjct: 10 KVTFKVTLTSDPKLPFRVFSVPEEAPFTAVLKFAAEEFKVPAQTSAIITNDGVGINPQQI 69

Query: 68 -GNVFLKHGSELRLIPRDRVG 78
           GNVFLKHGSELRLIPRDRVG
Sbjct: 70 AGNVFLKHGSELRLIPRDRVG 90

[Close]

BLAST of CsGy5G014120 vs. Swiss-Prot
Match: sp|Q176V0|UFM1_AEDAE (Ubiquitin-fold modifier 1 OS=Aedes aegypti OX=7159 GN=AAEL006251 PE=3 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 9.6e-28
Identity = 64/82 (78.05%), Postives = 68/82 (82.93%), Query Frame = 0


Query: 8  KVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITN---------- 67
          KV+FK+TLTSDPKLPFKV SVPEA PFTAVLKFAAEEFKVPP TSAIIT+          
Sbjct: 4  KVTFKITLTSDPKLPFKVLSVPEATPFTAVLKFAAEEFKVPPATSAIITDDGIGINPQQT 63

Query: 68 -GNVFLKHGSELRLIPRDRVGA 79
           GNVFLKHGSELRLIPRDRVG+
Sbjct: 64 AGNVFLKHGSELRLIPRDRVGS 85

[Close]

BLAST of CsGy5G014120 vs. TrEMBL
Match: tr|A0A2G2XME2|A0A2G2XME2_CAPBA (Ubiquitin-fold modifier 1 OS=Capsicum baccatum OX=33114 GN=CQW23_01020 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 5.1e-34
Identity = 75/78 (96.15%), Postives = 77/78 (98.72%), Query Frame = 0


Query: 2  AGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNGNVF 61
          +G GGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNGNVF
Sbjct: 3  SGGGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNGNVF 62

Query: 62 LKHGSELRLIPRDRVGAA 80
          LKHGSELRLIPRDRVGA+
Sbjct: 63 LKHGSELRLIPRDRVGAS 80

[Close]

BLAST of CsGy5G014120 vs. TrEMBL
Match: tr|I1KA64|I1KA64_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100306035 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.1e-33
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 4  AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNGNVFLK 63
          AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNGNVFLK
Sbjct: 2  AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNGNVFLK 61

Query: 64 HGSELRLIPRDRVGA 79
          HGSELRLIPRDRVGA
Sbjct: 62 HGSELRLIPRDRVGA 76

[Close]

BLAST of CsGy5G014120 vs. TrEMBL
Match: tr|A0A1S3CPQ1|A0A1S3CPQ1_CUCME (Ubiquitin-fold modifier 1 OS=Cucumis melo OX=3656 GN=LOC103503394 PE=3 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.5e-33
Identity = 79/90 (87.78%), Postives = 79/90 (87.78%), Query Frame = 0


Query: 1  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITN--- 60
          MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITN   
Sbjct: 1  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV 60

Query: 61 --------GNVFLKHGSELRLIPRDRVGAA 80
                  GNVFLKHGSELRLIPRDRVGAA
Sbjct: 61 GINPQQSAGNVFLKHGSELRLIPRDRVGAA 90

[Close]

BLAST of CsGy5G014120 vs. TrEMBL
Match: tr|A0A0A0KTD7|A0A0A0KTD7_CUCSA (Ubiquitin-fold modifier 1 OS=Cucumis sativus OX=3659 GN=Csa_5G374760 PE=3 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.5e-33
Identity = 79/90 (87.78%), Postives = 79/90 (87.78%), Query Frame = 0


Query: 1  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITN--- 60
          MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITN   
Sbjct: 1  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV 60

Query: 61 --------GNVFLKHGSELRLIPRDRVGAA 80
                  GNVFLKHGSELRLIPRDRVGAA
Sbjct: 61 GINPQQSAGNVFLKHGSELRLIPRDRVGAA 90

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BLAST of CsGy5G014120 vs. TrEMBL
Match: tr|A0A0D2N9S7|A0A0D2N9S7_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_005G091100 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 5.6e-33
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 0


Query: 4  AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNGNVFLK 63
          A GGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNGNVFLK
Sbjct: 2  ASGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNGNVFLK 61

Query: 64 HGSELRLIPRDRVGA 79
          HGSELRLIPRDRVGA
Sbjct: 62 HGSELRLIPRDRVGA 76

The following BLAST results are available for this feature:

BLAST of CsGy5G014120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022885098.1	4.5e-34	100.00	ubiquitin-fold modifier 1 isoform X2 [Olea europaea var. sylvestris]	[more]
PHT58657.1	7.7e-34	96.15	Ubiquitin-fold modifier 1 [Capsicum baccatum]	[more]
XP_011001429.1	1.7e-33	97.40	PREDICTED: ubiquitin-fold modifier 1 isoform X2 [Populus euphratica]	[more]
KRH53194.1	1.7e-33	100.00	hypothetical protein GLYMA_06G110100 [Glycine max]	[more]
XP_004140331.1	3.8e-33	87.78	PREDICTED: ubiquitin-fold modifier 1 [Cucumis sativus] >XP_008465795.1 PREDICTED...	[more]

BLAST of CsGy5G014120 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G77710.1	2.7e-33	84.88	Ubiquitin-like, Ufm1 (InterPro:IPR005375)	[more]

BLAST of CsGy5G014120 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9CA23\|UFM1_ARATH	4.9e-32	84.88	Ubiquitin-fold modifier 1 OS=Arabidopsis thaliana OX=3702 GN=At1g77710 PE=3 SV=1	[more]
sp\|Q94DM8\|UFM1_ORYSJ	3.5e-30	84.15	Ubiquitin-fold modifier 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g09624...	[more]
sp\|Q5PU89\|UFM1_CHLIN	1.9e-28	77.91	Ubiquitin-fold modifier 1 OS=Chlamydomonas incerta OX=51695 GN=PR46a PE=3 SV=1	[more]
sp\|Q94EY2\|UFM1_CHLRE	2.5e-28	81.48	Ubiquitin-fold modifier 1 OS=Chlamydomonas reinhardtii OX=3055 GN=PR46a PE=3 SV=...	[more]
sp\|Q176V0\|UFM1_AEDAE	9.6e-28	78.05	Ubiquitin-fold modifier 1 OS=Aedes aegypti OX=7159 GN=AAEL006251 PE=3 SV=1	[more]

BLAST of CsGy5G014120 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2G2XME2\|A0A2G2XME2_CAPBA	5.1e-34	96.15	Ubiquitin-fold modifier 1 OS=Capsicum baccatum OX=33114 GN=CQW23_01020 PE=4 SV=1	[more]
tr\|I1KA64\|I1KA64_SOYBN	1.1e-33	100.00	Uncharacterized protein OS=Glycine max OX=3847 GN=100306035 PE=4 SV=1	[more]
tr\|A0A1S3CPQ1\|A0A1S3CPQ1_CUCME	2.5e-33	87.78	Ubiquitin-fold modifier 1 OS=Cucumis melo OX=3656 GN=LOC103503394 PE=3 SV=1	[more]
tr\|A0A0A0KTD7\|A0A0A0KTD7_CUCSA	2.5e-33	87.78	Ubiquitin-fold modifier 1 OS=Cucumis sativus OX=3659 GN=Csa_5G374760 PE=3 SV=1	[more]
tr\|A0A0D2N9S7\|A0A0D2N9S7_GOSRA	5.6e-33	98.67	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_005G091100 PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR029071	Ubiquitin-like_domsf
IPR005375	UFM1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G014120.1	CsGy5G014120.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005375	Ubiquitin-fold modifier 1	PFAM	PF03671	Ufm1	coord: 8..71 e-value: 8.3E-28 score: 96.2
IPR005375	Ubiquitin-fold modifier 1	PANTHER	PTHR15825	FAMILY NOT NAMED	coord: 2..79
None	No IPR available	GENE3D	G3DSA:3.10.20.90		coord: 1..78 e-value: 9.0E-36 score: 123.9
None	No IPR available	PANTHER	PTHR15825:SF1	UBIQUITIN-FOLD MODIFIER 1	coord: 2..79
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	SSF54236	Ubiquitin-like	coord: 4..77

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy5G014120	Csa5G374760	Cucumber (Chinese Long) v2	cgybcuB223
CsGy5G014120	MELO3C003038	Melon (DHL92) v3.5.1	cgybmeB294
CsGy5G014120	ClCG03G009400	Watermelon (Charleston Gray)	cgybwcgB349
CsGy5G014120	CSPI05G14140	Wild cucumber (PI 183967)	cgybcpiB225
CsGy5G014120	CmaCh15G006980	Cucurbita maxima (Rimu)	cgybcmaB600
CsGy5G014120	CmoCh04G024510	Cucurbita moschata (Rifu)	cgybcmoB654
CsGy5G014120	CmoCh15G007140	Cucurbita moschata (Rifu)	cgybcmoB574
CsGy5G014120	Cp4.1LG13g04700	Cucurbita pepo (Zucchini)	cgybcpeB609
CsGy5G014120	MELO3C003038.2	Melon (DHL92) v3.6.1	cgybmedB294
CsGy5G014120	CsaV3_5G023210	Cucumber (Chinese Long) v3	cgybcucB232
CsGy5G014120	Bhi12G001144	Wax gourd	cgybwgoB428
CsGy5G014120	Carg01509	Silver-seed gourd	carcgybB0819

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy5G014120	Watermelon (97103) v2	cgybwmbB354
CsGy5G014120	Cucurbita maxima (Rimu)	cgybcmaB676
CsGy5G014120	Cucurbita pepo (Zucchini)	cgybcpeB650
CsGy5G014120	Bottle gourd (USVL1VR-Ls)	cgyblsiB298
CsGy5G014120	Watermelon (97103) v1	cgybwmB357