CsGy5G013530 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy5G013530
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	hypothetical protein
Location	Chr5 : 17559045 .. 17560398 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTACTCCTTCTAATGAACGCCGAAGATGGCAATAACGAAAGGAGCCCCCGTCTCGATCTTTCTCTCCGTCCGCCGTCTGCTCAACCTCCTCCAGCACCTGAATATCCCCAGCTGTCATCCACATTGCCCTCGTCGCAAATTCCAAACGAAGAATCCAACGCAACCCCTCAACCCAACATTGAAACTTCAAATGACCAACAACAACACCGACGGAGACTGAGACGACGTAGAACGAGAGCAGACATGACAAGGATTGAGCCACCGTATCCATGGGCGACTGACAAACGAGCGGTAGTCCACGAACTCAAGTACCTTCAATCGAACAACATAATGAAAATCAAGGGGGAAGTGATATGCAAAAAATGCGAGATGAAGTATGAAATTGAGTATGATCTAATGAATAAGGTTAATGAAATAACAAGATTCTTTGAAGAAGAAATAGATAGTATGCATGATAGAGCTCCAAATTGTTGGACAAAACCCAATTTACCAAATTGTAATTTCTGCAATGAAGAAAAATGTGTAATGCCAGTGATATCTAAAGAAGATGATTCAAAGATCAATTGGTTGTTCTTGTTCTTGGGGCAATTTCTTGGATGTTTGAGGCTCAAGCAACTCAAACATTTTTGTGCTCAATCAAATATTCATAGAACTGGGGCCAAGAATCGTCTTCTTTATCTCAGTTATCGTGCTTTGTTTCATCAACTCCAACCCTCCCCAACACTCAACATTAATTGAGGTAAAGATTATATTTTGCCCTTCTTTTATTTAATTTAATTTATTTTTTAATGTTGGGGTTCGACGACATGTAAGATTGGTATTGCAATTTTTCTTTCTATAGTCTTCTTTGGATACTATTGTTGGTTTGGCTATGAATTTTATTTTTATTTGAGAATTATTTTGTGTTAATTGTCTATTTTTGTTACCGAAAGAGAAAATTATTGAATTTGTCTGTCTCTTGACATTGTTAAAGAAAATTATCAACGGTTTTTCATTATTTTAGAAGATTGGTAGAAGAGAGGAATCGGGAGGTTTGAGAACAAAAATAAAAGATTGATACTCTCATAATTCGTTTATTCTTTCCCTTATTTTTCCTACCAAGTTGCTCCCTAATCAAGTTAACCCAATTAATATCTAATTTAACCACGTTGAATGTTTTCCAATTAAGAGTCTAAATTTACATTATTGAATATGAGCTAAATGGATAGAAGTTGAATCCCAAGTTTTTCTTGAAATGTGTAGGTAGGTGTATTTTATTCAAGTTAAGTTTCCACTCCAAGGAGAATTTGATGGTAGGCTCTGTTACCCTTCCAATATTAATTGTTTCCTTAGGTTTCAAATATATGTAGGCC

mRNA sequence

AATTACTCCTTCTAATGAACGCCGAAGATGGCAATAACGAAAGGAGCCCCCGTCTCGATCTTTCTCTCCGTCCGCCGTCTGCTCAACCTCCTCCAGCACCTGAATATCCCCAGCTGTCATCCACATTGCCCTCGTCGCAAATTCCAAACGAAGAATCCAACGCAACCCCTCAACCCAACATTGAAACTTCAAATGACCAACAACAACACCGACGGAGACTGAGACGACGTAGAACGAGAGCAGACATGACAAGGATTGAGCCACCGTATCCATGGGCGACTGACAAACGAGCGGTAGTCCACGAACTCAAGTACCTTCAATCGAACAACATAATGAAAATCAAGGGGGAAGTGATATGCAAAAAATGCGAGATGAAGTATGAAATTGAGTATGATCTAATGAATAAGGTTAATGAAATAACAAGATTCTTTGAAGAAGAAATAGATAGTATGCATGATAGAGCTCCAAATTGTTGGACAAAACCCAATTTACCAAATTGTAATTTCTGCAATGAAGAAAAATGTGTAATGCCAGTGATATCTAAAGAAGATGATTCAAAGATCAATTGGTTGTTCTTGTTCTTGGGGCAATTTCTTGGATGTTTGAGGCTCAAGCAACTCAAACATTTTTGTGCTCAATCAAATATTCATAGAACTGGGGCCAAGAATCGTCTTCTTTATCTCAGTTATCGTGCTTTGTTTCATCAACTCCAACCCTCCCCAACACTCAACATTAATTGAGGTAGGTGTATTTTATTCAAGTTAAGTTTCCACTCCAAGGAGAATTTGATGGTAGGCTCTGTTACCCTTCCAATATTAATTGTTTCCTTAGGTTTCAAATATATGTAGGCC

Coding sequence (CDS)

ATGAACGCCGAAGATGGCAATAACGAAAGGAGCCCCCGTCTCGATCTTTCTCTCCGTCCGCCGTCTGCTCAACCTCCTCCAGCACCTGAATATCCCCAGCTGTCATCCACATTGCCCTCGTCGCAAATTCCAAACGAAGAATCCAACGCAACCCCTCAACCCAACATTGAAACTTCAAATGACCAACAACAACACCGACGGAGACTGAGACGACGTAGAACGAGAGCAGACATGACAAGGATTGAGCCACCGTATCCATGGGCGACTGACAAACGAGCGGTAGTCCACGAACTCAAGTACCTTCAATCGAACAACATAATGAAAATCAAGGGGGAAGTGATATGCAAAAAATGCGAGATGAAGTATGAAATTGAGTATGATCTAATGAATAAGGTTAATGAAATAACAAGATTCTTTGAAGAAGAAATAGATAGTATGCATGATAGAGCTCCAAATTGTTGGACAAAACCCAATTTACCAAATTGTAATTTCTGCAATGAAGAAAAATGTGTAATGCCAGTGATATCTAAAGAAGATGATTCAAAGATCAATTGGTTGTTCTTGTTCTTGGGGCAATTTCTTGGATGTTTGAGGCTCAAGCAACTCAAACATTTTTGTGCTCAATCAAATATTCATAGAACTGGGGCCAAGAATCGTCTTCTTTATCTCAGTTATCGTGCTTTGTTTCATCAACTCCAACCCTCCCCAACACTCAACATTAATTGA

Protein sequence

MNAEDGNNERSPRLDLSLRPPSAQPPPAPEYPQLSSTLPSSQIPNEESNATPQPNIETSNDQQQHRRRLRRRRTRADMTRIEPPYPWATDKRAVVHELKYLQSNNIMKIKGEVICKKCEMKYEIEYDLMNKVNEITRFFEEEIDSMHDRAPNCWTKPNLPNCNFCNEEKCVMPVISKEDDSKINWLFLFLGQFLGCLRLKQLKHFCAQSNIHRTGAKNRLLYLSYRALFHQLQPSPTLNIN

Homology

[Close]

BLAST of CsGy5G013530 vs. NCBI nr
Match: XP_011656206.1 (PREDICTED: uncharacterized protein LOC105435666 [Cucumis sativus] >KGN50920.1 hypothetical protein Csa_5G332030 [Cucumis sativus])

HSP 1 Score: 459.1 bits (1180), Expect = 9.0e-126
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0


Query: 1   MNAEDGNNERSPRLDLSLRPPSAQPPPAPEYPQLSSTLPSSQIPNEESNATPQPNIETXX 60
           MNAEDGNNERSPRLDLSLRPPSAQPPPAPEYPQLSSTLPSSQIPNEESNATPQPNIETXX
Sbjct: 1   MNAEDGNNERSPRLDLSLRPPSAQPPPAPEYPQLSSTLPSSQIPNEESNATPQPNIETXX 60

Query: 61  XXXXXXXXXXXXXXXADMTRIEPPYPWATDKRAVVHELKYLQSNNIMKIKGEVICKKCEM 120
           XXXXXXXXXXXXXXXADMTRIEPPYPWATDKRAVVHELKYLQSNNIMKIKGEVICKKCEM
Sbjct: 61  XXXXXXXXXXXXXXXADMTRIEPPYPWATDKRAVVHELKYLQSNNIMKIKGEVICKKCEM 120

Query: 121 KYEIEYDLMNKVNEITRFFEEEIDSMHDRAPNCWTKPNLPNCNFCNEEKCVMPVISKEDD 180
           KYEIEYDLMNKVNEITRFFEEEIDSMHDRAPNCWTKPNLPNCNFCNEEKCVMPVISKEDD
Sbjct: 121 KYEIEYDLMNKVNEITRFFEEEIDSMHDRAPNCWTKPNLPNCNFCNEEKCVMPVISKEDD 180

Query: 181 SKINWLFLFLGQFLGCLRLKQLKHFCAQSNIHRTGAKNRLLYLSYRALFHQLQPSPTLNI 240
           SKINWLFLFLGQFLGCLRLKQLKHFCAQSNIHRTGAKNRLLYLSYRALFHQLQPSPTLNI
Sbjct: 181 SKINWLFLFLGQFLGCLRLKQLKHFCAQSNIHRTGAKNRLLYLSYRALFHQLQPSPTLNI 240

Query: 241 N 242
           N
Sbjct: 241 N 241

[Close]

BLAST of CsGy5G013530 vs. NCBI nr
Match: XP_008463189.1 (PREDICTED: uncharacterized protein LOC103501397 [Cucumis melo])

HSP 1 Score: 318.9 bits (816), Expect = 1.4e-83
Identity = 180/222 (81.08%), Postives = 195/222 (87.84%), Query Frame = 0


Query: 14  LDLSLRPPSAQPPPAPEYPQ-LSSTLPSSQIPNEESNATPQPNIETXXXXXXXXXXXXXX 73
           LDLSLR PS +PP  P+Y Q  +STLP SQI NEES A  +     XXXXXXXXXXXXXX
Sbjct: 7   LDLSLRFPSLRPPLPPQYSQPPTSTLP-SQITNEESEAITR---XXXXXXXXXXXXXXXX 66

Query: 74  XXXADMTRIEPPYPWATDKRAVVHELKYLQSNNIMKIKGEVICKKCEMKYEIEYDLMNKV 133
           XX ADMTRIEPPYPW+TD+RAVVHELKYLQ NNIM IKGEVICKKCEMKYE+EYDLMNKV
Sbjct: 67  XXRADMTRIEPPYPWSTDRRAVVHELKYLQVNNIMTIKGEVICKKCEMKYEMEYDLMNKV 126

Query: 134 NEITRFFEEEIDSMHDRAPNCWTKPNLPNCNFCNEEKCVMPVISKEDDSKINWLFLFLGQ 193
           NEITRFFEEEIDSMHDRAP+CWT PNLPNC+ CNEEKCVMPV S+E D+KINWLFLFLGQ
Sbjct: 127 NEITRFFEEEIDSMHDRAPSCWTNPNLPNCSLCNEEKCVMPVTSQE-DTKINWLFLFLGQ 186

Query: 194 FLGCLRLKQLKHFCAQSNIHRTGAKNRLLYLSYRALFHQLQP 235
           FLGCL+L+QLK+FC Q+NIHRTGAKNRLLYLSYR LF QLQP
Sbjct: 187 FLGCLKLRQLKYFCTQTNIHRTGAKNRLLYLSYRTLFRQLQP 223

[Close]

BLAST of CsGy5G013530 vs. NCBI nr
Match: XP_008439384.1 (PREDICTED: protein PAF1 homolog [Cucumis melo])

HSP 1 Score: 229.9 bits (585), Expect = 8.9e-57
Identity = 105/160 (65.62%), Postives = 133/160 (83.12%), Query Frame = 0


Query: 76  ADMTRIEPPYPWATDKRAVVHELKYLQSNNIMKIKGEVICKKCEMKYEIEYDLMNKVNEI 135
           AD +RIEPPYPW+T+K AV+H+L+YL++NNI+ IKGEV CK+C+ K EIEY+L++K +EI
Sbjct: 179 ADNSRIEPPYPWSTEKGAVIHKLEYLEANNILTIKGEVKCKRCDRKDEIEYELISKFDEI 238

Query: 136 TRFFEEEIDSMHDRAPNCWTKPNLPNCNFCNEEKCVMPVISKEDDSKINWLFLFLGQFLG 195
            RF E E D+MHDRAP+ W  P L NCNFCN+E+CV P+IS E +S INWLFL LG FLG
Sbjct: 239 RRFIEREKDNMHDRAPDRWVNPILLNCNFCNKEECVEPIIS-EANSNINWLFLLLGNFLG 298

Query: 196 CLRLKQLKHFCAQSNIHRTGAKNRLLYLSYRALFHQLQPS 236
           CL+L QLK+FC Q+NIHRTGAK+RL+YL+Y AL  QLQP+
Sbjct: 299 CLKLSQLKYFCTQTNIHRTGAKDRLIYLTYLALCKQLQPN 337

[Close]

BLAST of CsGy5G013530 vs. NCBI nr
Match: XP_011652763.1 (PREDICTED: uncharacterized protein LOC105435088 [Cucumis sativus] >KGN57096.1 hypothetical protein Csa_3G153700 [Cucumis sativus])

HSP 1 Score: 224.9 bits (572), Expect = 2.8e-55
Identity = 100/157 (63.69%), Postives = 125/157 (79.62%), Query Frame = 0


Query: 79  TRIEPPYPWATDKRAVVHELKYLQSNNIMKIKGEVICKKCEMKYEIEYDLMNKVNEITRF 138
           +RIEPPYPW+T++ A++H+L+YLQ+NNI  IKGEV CK+C+ K EIEYDLM+K  E+ +F
Sbjct: 140 SRIEPPYPWSTEQGAIIHKLEYLQANNIRTIKGEVKCKRCKRKDEIEYDLMSKFEEMIKF 199

Query: 139 FEEEIDSMHDRAPNCWTKPNLPNCNFCNEEKCVMPVISKEDDSKINWLFLFLGQFLGCLR 198
            E E  +MHDRAPNCWT P L NC FCN+EKCV P+I   +D+KINWLFL LG FLG L+
Sbjct: 200 IEREKCNMHDRAPNCWTNPTLLNCKFCNKEKCVEPIIPAGNDNKINWLFLLLGNFLGRLK 259

Query: 199 LKQLKHFCAQSNIHRTGAKNRLLYLSYRALFHQLQPS 236
           L QLKHFC Q+ IHRTGAK+RL+Y +Y  L  QLQP+
Sbjct: 260 LTQLKHFCTQTKIHRTGAKDRLVYFTYFGLCKQLQPT 296

[Close]

BLAST of CsGy5G013530 vs. NCBI nr
Match: XP_022953023.1 (mucin-16-like [Cucurbita moschata])

HSP 1 Score: 224.2 bits (570), Expect = 4.9e-55
Identity = 106/167 (63.47%), Postives = 127/167 (76.05%), Query Frame = 0


Query: 76  ADMTRIEPPYPWATDKRAVVHELKYLQSNNIMKIKGEVICKKCEMKYEIEYDLMNKVNEI 135
           AD  RIEPPYPW+ ++RA +H L+YLQSNNI+ IKG+V CKKCE  YEIEY+LMNK +EI
Sbjct: 442 ADTRRIEPPYPWSAEQRASIHNLEYLQSNNIVTIKGDVRCKKCERFYEIEYNLMNKFDEI 501

Query: 136 TRFFEEEIDSMHDRAPNCWTKPNLPNCNFCNEEKCVMPVISKEDD----SKINWLFLFLG 195
            RF E E D+MHDRAP CW  P LPNC  C EE CV P+I  E+D    S+INWLFL LG
Sbjct: 502 ARFIERERDNMHDRAPICWKNPILPNCEHCREENCVEPMIPDEEDDNQFSRINWLFLLLG 561

Query: 196 QFLGCLRLKQLKHFCAQSNIHRTGAKNRLLYLSYRALFHQLQPSPTL 239
           Q +G L+LKQLK+FCA +  HRTGAK+RL++L+Y AL  QLQPS  L
Sbjct: 562 QLIGRLKLKQLKYFCAHTYNHRTGAKDRLIFLTYLALCKQLQPSNRL 608

[Close]

BLAST of CsGy5G013530 vs. TAIR10
Match: AT1G49330.1 (hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 156.4 bits (394), Expect = 2.3e-38
Identity = 94/228 (41.23%), Postives = 118/228 (51.75%), Query Frame = 0


Query: 20  PPSAQPP--------PAPEYPQL-SSTLPSSQIPNEESNATPQPNIETXXXXXXXXXXXX 79
           PPS Q P          P  PQL +   P S +    SN TP P                
Sbjct: 99  PPSHQIPLWMSNYFQQTPNPPQLVTHFFPPSGLAPPSSNLTPPPVKRPVTGSVRIYRSRS 158

Query: 80  XXXXXADMTRIEPPYPWATDKRAVVHELKYLQSNNIMKIKGEVICKKCEMKYEIEYDLMN 139
                +D   I PP+PWAT++R  +  L+YL+SN I  I GEV C+ CE  Y++ Y+L  
Sbjct: 159 TVSKKSD--TISPPFPWATNRRGEIQSLEYLESNQITTITGEVQCRHCEKVYQVSYNLRE 218

Query: 140 KVNEITRFFEEEIDSMHDRAPNCWTKPNLPNCNFCNEEKCVMPVISKEDDSKINWLFLFL 199
           +  E+ +F+  E   M DRA   W  P    C  C  EK V PVI+ E  S+INWLFL L
Sbjct: 219 RFAEVVKFYLTEKRKMRDRAHKDWAYPEQRRCELCGREKAVKPVIA-ERKSQINWLFLLL 278

Query: 200 GQFLGCLRLKQLKHFCAQSNIHRTGAKNRLLYLSYRALFHQLQPSPTL 239
           GQ LG   L+QLK+FC  S  HRTGAK+R+LYL+Y  L   LQP   L
Sbjct: 279 GQTLGFCTLEQLKNFCKHSKNHRTGAKDRVLYLTYMGLCKMLQPKSDL 323

[Close]

BLAST of CsGy5G013530 vs. TAIR10
Match: AT2G16190.1 (BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G49330.1))

HSP 1 Score: 140.2 bits (352), Expect = 1.7e-33
Identity = 69/160 (43.12%), Postives = 96/160 (60.00%), Query Frame = 0


Query: 81  IEPPYPWATDKRAVVHELKYLQSNNIMKIKGEVICKKCEMKYEIEYDLMNKVNEITRFFE 140
           I PPYPWAT K   +   + L SNNI  I G+V CK C+    +EY+L  K +E+  + +
Sbjct: 147 IVPPYPWATKKPGKIQSFRDLSSNNINVISGQVHCKTCDRTDTVEYNLEEKFSELYGYIK 206

Query: 141 EEIDSMHDRAPNCWTKPNLPNCNFCNEEKCVMPVISKEDDSKINWLFLFLGQFLGCLRLK 200
              + M  RAP  W+ P L  C  C  E  + PV+S E   +INWLFL LGQ LGC  L 
Sbjct: 207 VNKEEMRHRAPGSWSTPKLIPCRTCKSE--MKPVMS-ERKEEINWLFLLLGQMLGCCTLD 266

Query: 201 QLKHFCAQSNIHRTGAKNRLLYLSYRALFHQLQPSPTLNI 241
           QL++FC  ++ HRTG+K+R++Y++Y +L  QL P    N+
Sbjct: 267 QLRYFCQLNSKHRTGSKDRVVYITYLSLCKQLDPEGPFNL 303

[Close]

BLAST of CsGy5G013530 vs. TrEMBL
Match: tr|A0A0A0KMQ2|A0A0A0KMQ2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G332030 PE=4 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 5.9e-126
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0


Query: 1   MNAEDGNNERSPRLDLSLRPPSAQPPPAPEYPQLSSTLPSSQIPNEESNATPQPNIETXX 60
           MNAEDGNNERSPRLDLSLRPPSAQPPPAPEYPQLSSTLPSSQIPNEESNATPQPNIETXX
Sbjct: 1   MNAEDGNNERSPRLDLSLRPPSAQPPPAPEYPQLSSTLPSSQIPNEESNATPQPNIETXX 60

Query: 61  XXXXXXXXXXXXXXXADMTRIEPPYPWATDKRAVVHELKYLQSNNIMKIKGEVICKKCEM 120
           XXXXXXXXXXXXXXXADMTRIEPPYPWATDKRAVVHELKYLQSNNIMKIKGEVICKKCEM
Sbjct: 61  XXXXXXXXXXXXXXXADMTRIEPPYPWATDKRAVVHELKYLQSNNIMKIKGEVICKKCEM 120

Query: 121 KYEIEYDLMNKVNEITRFFEEEIDSMHDRAPNCWTKPNLPNCNFCNEEKCVMPVISKEDD 180
           KYEIEYDLMNKVNEITRFFEEEIDSMHDRAPNCWTKPNLPNCNFCNEEKCVMPVISKEDD
Sbjct: 121 KYEIEYDLMNKVNEITRFFEEEIDSMHDRAPNCWTKPNLPNCNFCNEEKCVMPVISKEDD 180

Query: 181 SKINWLFLFLGQFLGCLRLKQLKHFCAQSNIHRTGAKNRLLYLSYRALFHQLQPSPTLNI 240
           SKINWLFLFLGQFLGCLRLKQLKHFCAQSNIHRTGAKNRLLYLSYRALFHQLQPSPTLNI
Sbjct: 181 SKINWLFLFLGQFLGCLRLKQLKHFCAQSNIHRTGAKNRLLYLSYRALFHQLQPSPTLNI 240

Query: 241 N 242
           N
Sbjct: 241 N 241

[Close]

BLAST of CsGy5G013530 vs. TrEMBL
Match: tr|A0A1S3CK70|A0A1S3CK70_CUCME (uncharacterized protein LOC103501397 OS=Cucumis melo OX=3656 GN=LOC103501397 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 9.6e-84
Identity = 180/222 (81.08%), Postives = 195/222 (87.84%), Query Frame = 0


Query: 14  LDLSLRPPSAQPPPAPEYPQ-LSSTLPSSQIPNEESNATPQPNIETXXXXXXXXXXXXXX 73
           LDLSLR PS +PP  P+Y Q  +STLP SQI NEES A  +     XXXXXXXXXXXXXX
Sbjct: 7   LDLSLRFPSLRPPLPPQYSQPPTSTLP-SQITNEESEAITR---XXXXXXXXXXXXXXXX 66

Query: 74  XXXADMTRIEPPYPWATDKRAVVHELKYLQSNNIMKIKGEVICKKCEMKYEIEYDLMNKV 133
           XX ADMTRIEPPYPW+TD+RAVVHELKYLQ NNIM IKGEVICKKCEMKYE+EYDLMNKV
Sbjct: 67  XXRADMTRIEPPYPWSTDRRAVVHELKYLQVNNIMTIKGEVICKKCEMKYEMEYDLMNKV 126

Query: 134 NEITRFFEEEIDSMHDRAPNCWTKPNLPNCNFCNEEKCVMPVISKEDDSKINWLFLFLGQ 193
           NEITRFFEEEIDSMHDRAP+CWT PNLPNC+ CNEEKCVMPV S+E D+KINWLFLFLGQ
Sbjct: 127 NEITRFFEEEIDSMHDRAPSCWTNPNLPNCSLCNEEKCVMPVTSQE-DTKINWLFLFLGQ 186

Query: 194 FLGCLRLKQLKHFCAQSNIHRTGAKNRLLYLSYRALFHQLQP 235
           FLGCL+L+QLK+FC Q+NIHRTGAKNRLLYLSYR LF QLQP
Sbjct: 187 FLGCLKLRQLKYFCTQTNIHRTGAKNRLLYLSYRTLFRQLQP 223

[Close]

BLAST of CsGy5G013530 vs. TrEMBL
Match: tr|A0A1S3AZB1|A0A1S3AZB1_CUCME (protein PAF1 homolog OS=Cucumis melo OX=3656 GN=LOC103484199 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 5.9e-57
Identity = 105/160 (65.62%), Postives = 133/160 (83.12%), Query Frame = 0


Query: 76  ADMTRIEPPYPWATDKRAVVHELKYLQSNNIMKIKGEVICKKCEMKYEIEYDLMNKVNEI 135
           AD +RIEPPYPW+T+K AV+H+L+YL++NNI+ IKGEV CK+C+ K EIEY+L++K +EI
Sbjct: 179 ADNSRIEPPYPWSTEKGAVIHKLEYLEANNILTIKGEVKCKRCDRKDEIEYELISKFDEI 238

Query: 136 TRFFEEEIDSMHDRAPNCWTKPNLPNCNFCNEEKCVMPVISKEDDSKINWLFLFLGQFLG 195
            RF E E D+MHDRAP+ W  P L NCNFCN+E+CV P+IS E +S INWLFL LG FLG
Sbjct: 239 RRFIEREKDNMHDRAPDRWVNPILLNCNFCNKEECVEPIIS-EANSNINWLFLLLGNFLG 298

Query: 196 CLRLKQLKHFCAQSNIHRTGAKNRLLYLSYRALFHQLQPS 236
           CL+L QLK+FC Q+NIHRTGAK+RL+YL+Y AL  QLQP+
Sbjct: 299 CLKLSQLKYFCTQTNIHRTGAKDRLIYLTYLALCKQLQPN 337

[Close]

BLAST of CsGy5G013530 vs. TrEMBL
Match: tr|A0A0A0LAK2|A0A0A0LAK2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G153700 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.9e-55
Identity = 100/157 (63.69%), Postives = 125/157 (79.62%), Query Frame = 0


Query: 79  TRIEPPYPWATDKRAVVHELKYLQSNNIMKIKGEVICKKCEMKYEIEYDLMNKVNEITRF 138
           +RIEPPYPW+T++ A++H+L+YLQ+NNI  IKGEV CK+C+ K EIEYDLM+K  E+ +F
Sbjct: 140 SRIEPPYPWSTEQGAIIHKLEYLQANNIRTIKGEVKCKRCKRKDEIEYDLMSKFEEMIKF 199

Query: 139 FEEEIDSMHDRAPNCWTKPNLPNCNFCNEEKCVMPVISKEDDSKINWLFLFLGQFLGCLR 198
            E E  +MHDRAPNCWT P L NC FCN+EKCV P+I   +D+KINWLFL LG FLG L+
Sbjct: 200 IEREKCNMHDRAPNCWTNPTLLNCKFCNKEKCVEPIIPAGNDNKINWLFLLLGNFLGRLK 259

Query: 199 LKQLKHFCAQSNIHRTGAKNRLLYLSYRALFHQLQPS 236
           L QLKHFC Q+ IHRTGAK+RL+Y +Y  L  QLQP+
Sbjct: 260 LTQLKHFCTQTKIHRTGAKDRLVYFTYFGLCKQLQPT 296

[Close]

BLAST of CsGy5G013530 vs. TrEMBL
Match: tr|A0A2H5NYI9|A0A2H5NYI9_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_087670 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 2.3e-45
Identity = 87/155 (56.13%), Postives = 108/155 (69.68%), Query Frame = 0


Query: 81  IEPPYPWATDKRAVVHELKYLQSNNIMKIKGEVICKKCEMKYEIEYDLMNKVNEITRFFE 140
           I  P+PWAT +RA VH L+YL S+N+ KI GEV CK+CE KYEIEYDL  K  E+  F  
Sbjct: 117 IPAPFPWATTRRATVHSLEYLTSHNMNKISGEVQCKRCEQKYEIEYDLHAKFMEVASFIS 176

Query: 141 EEIDSMHDRAPNCWTKPNLPNCNFCNEEKCVMPVISKEDDSKINWLFLFLGQFLGCLRLK 200
           E   +MHDRAP  W  PNLPNC FC +  CV P++ K+    INWLFL LGQ LGC +L 
Sbjct: 177 ENKYTMHDRAPAIWMNPNLPNCKFCGQSNCVKPILGKK--KSINWLFLLLGQMLGCCKLS 236

Query: 201 QLKHFCAQSNIHRTGAKNRLLYLSYRALFHQLQPS 236
           +LK+FC  +  HRTGAK+R+LYL+Y +L  QL P+
Sbjct: 237 ELKYFCKHTRNHRTGAKDRVLYLTYLSLCKQLDPN 269

The following BLAST results are available for this feature:

BLAST of CsGy5G013530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011656206.1	9.0e-126	100.00	PREDICTED: uncharacterized protein LOC105435666 [Cucumis sativus] >KGN50920.1 hy...	[more]
XP_008463189.1	1.4e-83	81.08	PREDICTED: uncharacterized protein LOC103501397 [Cucumis melo]	[more]
XP_008439384.1	8.9e-57	65.63	PREDICTED: protein PAF1 homolog [Cucumis melo]	[more]
XP_011652763.1	2.8e-55	63.69	PREDICTED: uncharacterized protein LOC105435088 [Cucumis sativus] >KGN57096.1 hy...	[more]
XP_022953023.1	4.9e-55	63.47	mucin-16-like [Cucurbita moschata]	[more]

BLAST of CsGy5G013530 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G49330.1	2.3e-38	41.23	hydroxyproline-rich glycoprotein family protein	[more]
AT2G16190.1	1.7e-33	43.13	BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein fam...	[more]

BLAST of CsGy5G013530 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy5G013530 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KMQ2\|A0A0A0KMQ2_CUCSA	5.9e-126	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G332030 PE=4 SV=1	[more]
tr\|A0A1S3CK70\|A0A1S3CK70_CUCME	9.6e-84	81.08	uncharacterized protein LOC103501397 OS=Cucumis melo OX=3656 GN=LOC103501397 PE=...	[more]
tr\|A0A1S3AZB1\|A0A1S3AZB1_CUCME	5.9e-57	65.63	protein PAF1 homolog OS=Cucumis melo OX=3656 GN=LOC103484199 PE=4 SV=1	[more]
tr\|A0A0A0LAK2\|A0A0A0LAK2_CUCSA	1.9e-55	63.69	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G153700 PE=4 SV=1	[more]
tr\|A0A2H5NYI9\|A0A2H5NYI9_CITUN	2.3e-45	56.13	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_087670 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G013530.1	CsGy5G013530.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..76
None	No IPR available	PANTHER	PTHR34272	FAMILY NOT NAMED	coord: 30..237
None	No IPR available	PANTHER	PTHR34272:SF1	F13F21.24 PROTEIN	coord: 30..237

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy5G013530	Csa5G332030	Cucumber (Chinese Long) v2	cgybcuB223
CsGy5G013530	CSPI05G13590	Wild cucumber (PI 183967)	cgybcpiB225
CsGy5G013530	MELO3C033918.2	Melon (DHL92) v3.6.1	cgybmedB295
CsGy5G013530	CsaV3_5G020520	Cucumber (Chinese Long) v3	cgybcucB232

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy5G013530	Cucurbita maxima (Rimu)	cgybcmaB603
CsGy5G013530	Cucurbita maxima (Rimu)	cgybcmaB614
CsGy5G013530	Cucurbita maxima (Rimu)	cgybcmaB654
CsGy5G013530	Cucurbita moschata (Rifu)	cgybcmoB577
CsGy5G013530	Cucurbita moschata (Rifu)	cgybcmoB589
CsGy5G013530	Cucurbita moschata (Rifu)	cgybcmoB634
CsGy5G013530	Cucurbita pepo (Zucchini)	cgybcpeB603
CsGy5G013530	Cucurbita pepo (Zucchini)	cgybcpeB632
CsGy5G013530	Bottle gourd (USVL1VR-Ls)	cgyblsiB297
CsGy5G013530	Melon (DHL92) v3.5.1	cgybmeB295
CsGy5G013530	Melon (DHL92) v3.5.1	cgybmeB304
CsGy5G013530	Melon (DHL92) v3.6.1	cgybmedB304
CsGy5G013530	Watermelon (Charleston Gray)	cgybwcgB335
CsGy5G013530	Watermelon (97103) v1	cgybwmB385
CsGy5G013530	Silver-seed gourd	carcgybB0534
CsGy5G013530	Silver-seed gourd	carcgybB0818
CsGy5G013530	Silver-seed gourd	carcgybB0820
CsGy5G013530	Watermelon (97103) v2	cgybwmbB322
CsGy5G013530	Wax gourd	cgybwgoB417