CsGy5G013530 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATTACTCCTTCTAATGAACGCCGAAGATGGCAATAACGAAAGGAGCCCCCGTCTCGATCTTTCTCTCCGTCCGCCGTCTGCTCAACCTCCTCCAGCACCTGAATATCCCCAGCTGTCATCCACATTGCCCTCGTCGCAAATTCCAAACGAAGAATCCAACGCAACCCCTCAACCCAACATTGAAACTTCAAATGACCAACAACAACACCGACGGAGACTGAGACGACGTAGAACGAGAGCAGACATGACAAGGATTGAGCCACCGTATCCATGGGCGACTGACAAACGAGCGGTAGTCCACGAACTCAAGTACCTTCAATCGAACAACATAATGAAAATCAAGGGGGAAGTGATATGCAAAAAATGCGAGATGAAGTATGAAATTGAGTATGATCTAATGAATAAGGTTAATGAAATAACAAGATTCTTTGAAGAAGAAATAGATAGTATGCATGATAGAGCTCCAAATTGTTGGACAAAACCCAATTTACCAAATTGTAATTTCTGCAATGAAGAAAAATGTGTAATGCCAGTGATATCTAAAGAAGATGATTCAAAGATCAATTGGTTGTTCTTGTTCTTGGGGCAATTTCTTGGATGTTTGAGGCTCAAGCAACTCAAACATTTTTGTGCTCAATCAAATATTCATAGAACTGGGGCCAAGAATCGTCTTCTTTATCTCAGTTATCGTGCTTTGTTTCATCAACTCCAACCCTCCCCAACACTCAACATTAATTGAGGTAAAGATTATATTTTGCCCTTCTTTTATTTAATTTAATTTATTTTTTAATGTTGGGGTTCGACGACATGTAAGATTGGTATTGCAATTTTTCTTTCTATAGTCTTCTTTGGATACTATTGTTGGTTTGGCTATGAATTTTATTTTTATTTGAGAATTATTTTGTGTTAATTGTCTATTTTTGTTACCGAAAGAGAAAATTATTGAATTTGTCTGTCTCTTGACATTGTTAAAGAAAATTATCAACGGTTTTTCATTATTTTAGAAGATTGGTAGAAGAGAGGAATCGGGAGGTTTGAGAACAAAAATAAAAGATTGATACTCTCATAATTCGTTTATTCTTTCCCTTATTTTTCCTACCAAGTTGCTCCCTAATCAAGTTAACCCAATTAATATCTAATTTAACCACGTTGAATGTTTTCCAATTAAGAGTCTAAATTTACATTATTGAATATGAGCTAAATGGATAGAAGTTGAATCCCAAGTTTTTCTTGAAATGTGTAGGTAGGTGTATTTTATTCAAGTTAAGTTTCCACTCCAAGGAGAATTTGATGGTAGGCTCTGTTACCCTTCCAATATTAATTGTTTCCTTAGGTTTCAAATATATGTAGGCC AATTACTCCTTCTAATGAACGCCGAAGATGGCAATAACGAAAGGAGCCCCCGTCTCGATCTTTCTCTCCGTCCGCCGTCTGCTCAACCTCCTCCAGCACCTGAATATCCCCAGCTGTCATCCACATTGCCCTCGTCGCAAATTCCAAACGAAGAATCCAACGCAACCCCTCAACCCAACATTGAAACTTCAAATGACCAACAACAACACCGACGGAGACTGAGACGACGTAGAACGAGAGCAGACATGACAAGGATTGAGCCACCGTATCCATGGGCGACTGACAAACGAGCGGTAGTCCACGAACTCAAGTACCTTCAATCGAACAACATAATGAAAATCAAGGGGGAAGTGATATGCAAAAAATGCGAGATGAAGTATGAAATTGAGTATGATCTAATGAATAAGGTTAATGAAATAACAAGATTCTTTGAAGAAGAAATAGATAGTATGCATGATAGAGCTCCAAATTGTTGGACAAAACCCAATTTACCAAATTGTAATTTCTGCAATGAAGAAAAATGTGTAATGCCAGTGATATCTAAAGAAGATGATTCAAAGATCAATTGGTTGTTCTTGTTCTTGGGGCAATTTCTTGGATGTTTGAGGCTCAAGCAACTCAAACATTTTTGTGCTCAATCAAATATTCATAGAACTGGGGCCAAGAATCGTCTTCTTTATCTCAGTTATCGTGCTTTGTTTCATCAACTCCAACCCTCCCCAACACTCAACATTAATTGAGGTAGGTGTATTTTATTCAAGTTAAGTTTCCACTCCAAGGAGAATTTGATGGTAGGCTCTGTTACCCTTCCAATATTAATTGTTTCCTTAGGTTTCAAATATATGTAGGCC ATGAACGCCGAAGATGGCAATAACGAAAGGAGCCCCCGTCTCGATCTTTCTCTCCGTCCGCCGTCTGCTCAACCTCCTCCAGCACCTGAATATCCCCAGCTGTCATCCACATTGCCCTCGTCGCAAATTCCAAACGAAGAATCCAACGCAACCCCTCAACCCAACATTGAAACTTCAAATGACCAACAACAACACCGACGGAGACTGAGACGACGTAGAACGAGAGCAGACATGACAAGGATTGAGCCACCGTATCCATGGGCGACTGACAAACGAGCGGTAGTCCACGAACTCAAGTACCTTCAATCGAACAACATAATGAAAATCAAGGGGGAAGTGATATGCAAAAAATGCGAGATGAAGTATGAAATTGAGTATGATCTAATGAATAAGGTTAATGAAATAACAAGATTCTTTGAAGAAGAAATAGATAGTATGCATGATAGAGCTCCAAATTGTTGGACAAAACCCAATTTACCAAATTGTAATTTCTGCAATGAAGAAAAATGTGTAATGCCAGTGATATCTAAAGAAGATGATTCAAAGATCAATTGGTTGTTCTTGTTCTTGGGGCAATTTCTTGGATGTTTGAGGCTCAAGCAACTCAAACATTTTTGTGCTCAATCAAATATTCATAGAACTGGGGCCAAGAATCGTCTTCTTTATCTCAGTTATCGTGCTTTGTTTCATCAACTCCAACCCTCCCCAACACTCAACATTAATTGA MNAEDGNNERSPRLDLSLRPPSAQPPPAPEYPQLSSTLPSSQIPNEESNATPQPNIETSNDQQQHRRRLRRRRTRADMTRIEPPYPWATDKRAVVHELKYLQSNNIMKIKGEVICKKCEMKYEIEYDLMNKVNEITRFFEEEIDSMHDRAPNCWTKPNLPNCNFCNEEKCVMPVISKEDDSKINWLFLFLGQFLGCLRLKQLKHFCAQSNIHRTGAKNRLLYLSYRALFHQLQPSPTLNIN
BLAST of CsGy5G013530 vs. NCBI nr
Match: XP_011656206.1 (PREDICTED: uncharacterized protein LOC105435666 [Cucumis sativus] >KGN50920.1 hypothetical protein Csa_5G332030 [Cucumis sativus]) HSP 1 Score: 459.1 bits (1180), Expect = 9.0e-126 Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0
BLAST of CsGy5G013530 vs. NCBI nr
Match: XP_008463189.1 (PREDICTED: uncharacterized protein LOC103501397 [Cucumis melo]) HSP 1 Score: 318.9 bits (816), Expect = 1.4e-83 Identity = 180/222 (81.08%), Postives = 195/222 (87.84%), Query Frame = 0
BLAST of CsGy5G013530 vs. NCBI nr
Match: XP_008439384.1 (PREDICTED: protein PAF1 homolog [Cucumis melo]) HSP 1 Score: 229.9 bits (585), Expect = 8.9e-57 Identity = 105/160 (65.62%), Postives = 133/160 (83.12%), Query Frame = 0
BLAST of CsGy5G013530 vs. NCBI nr
Match: XP_011652763.1 (PREDICTED: uncharacterized protein LOC105435088 [Cucumis sativus] >KGN57096.1 hypothetical protein Csa_3G153700 [Cucumis sativus]) HSP 1 Score: 224.9 bits (572), Expect = 2.8e-55 Identity = 100/157 (63.69%), Postives = 125/157 (79.62%), Query Frame = 0
BLAST of CsGy5G013530 vs. NCBI nr
Match: XP_022953023.1 (mucin-16-like [Cucurbita moschata]) HSP 1 Score: 224.2 bits (570), Expect = 4.9e-55 Identity = 106/167 (63.47%), Postives = 127/167 (76.05%), Query Frame = 0
BLAST of CsGy5G013530 vs. TAIR10
Match: AT1G49330.1 (hydroxyproline-rich glycoprotein family protein) HSP 1 Score: 156.4 bits (394), Expect = 2.3e-38 Identity = 94/228 (41.23%), Postives = 118/228 (51.75%), Query Frame = 0
BLAST of CsGy5G013530 vs. TAIR10
Match: AT2G16190.1 (BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G49330.1)) HSP 1 Score: 140.2 bits (352), Expect = 1.7e-33 Identity = 69/160 (43.12%), Postives = 96/160 (60.00%), Query Frame = 0
BLAST of CsGy5G013530 vs. TrEMBL
Match: tr|A0A0A0KMQ2|A0A0A0KMQ2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G332030 PE=4 SV=1) HSP 1 Score: 459.1 bits (1180), Expect = 5.9e-126 Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0
BLAST of CsGy5G013530 vs. TrEMBL
Match: tr|A0A1S3CK70|A0A1S3CK70_CUCME (uncharacterized protein LOC103501397 OS=Cucumis melo OX=3656 GN=LOC103501397 PE=4 SV=1) HSP 1 Score: 318.9 bits (816), Expect = 9.6e-84 Identity = 180/222 (81.08%), Postives = 195/222 (87.84%), Query Frame = 0
BLAST of CsGy5G013530 vs. TrEMBL
Match: tr|A0A1S3AZB1|A0A1S3AZB1_CUCME (protein PAF1 homolog OS=Cucumis melo OX=3656 GN=LOC103484199 PE=4 SV=1) HSP 1 Score: 229.9 bits (585), Expect = 5.9e-57 Identity = 105/160 (65.62%), Postives = 133/160 (83.12%), Query Frame = 0
BLAST of CsGy5G013530 vs. TrEMBL
Match: tr|A0A0A0LAK2|A0A0A0LAK2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G153700 PE=4 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 1.9e-55 Identity = 100/157 (63.69%), Postives = 125/157 (79.62%), Query Frame = 0
BLAST of CsGy5G013530 vs. TrEMBL
Match: tr|A0A2H5NYI9|A0A2H5NYI9_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_087670 PE=4 SV=1) HSP 1 Score: 191.4 bits (485), Expect = 2.3e-45 Identity = 87/155 (56.13%), Postives = 108/155 (69.68%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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