CsGy5G013210 (gene) Cucumber (Gy14) v2

NameCsGy5G013210
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptioncallose synthase 5
LocationChr5 : 16898348 .. 16899233 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTCTATTGGTTGAAAAATGAAAACTTGTGTTTTTGTGATAGGTTGACTTTGTTATTAGTTAGGTTACTTCAGTTGTTGGTTCATAAGCATATTGTGGTAGTTACTGCTAGTTGTCTTGTGTATGTTTGCACTTCATCCATTTTTTTTAATGACTTTTGCTTCTTCTATGTCTTGGAGTTCTTTTGTTTCGTATGGGCTAGGGTATTTTGTATATTCTATATATTCCAATACTAGTTCTGTTTGAACTATTTGCAGCCCACAATTGGTGAAATTTCTTCAATATCAGATAAAAGTATCTTGTCAAATCTCTTGGGGAAGACAATAAAGTTAGAAATAGAGGATTAGGAGACACACCCATAGAGTTTATTAGAACTCTTGCCTAAAAATTAGAATTCTTCGTTCCAAGCATCCTTCTAATTATAATTTTAAAACTAAACTGAATTTTTAAATGAAACAGGGAGATGGATCTCTTGCTAGTTCCTTATTCCTCAGATCCCAGCCTAAAAATAATCCAAATGCCTCCCTTTTTACTAGCCAGCAAGGTCAATATAGCCCCTTTATGTTTTCTTTTAATTTTTAGGCATACTTATAGCAAATATTAACAATTTTTCTACTGCTACAGATTCCAATAACCTTGGATATGGCTGTTGAATTTCAATCCAGAGATTCTGACCTATGGAAGCACATTTATGCAGATGAGTACATGAAATGTAAAGTGATAGAGTGTTGTGAATCTTTAAAAAATGTCCTGAATGTTCTGGCAGTTGGAGAAAATGAGAAAAGATTCCAAGCTACATTCCTACTTATTGAACCAAACATCATCAAATAATCATAGTTCTTTCGTTTTTGTCAGTTGCAGTTTTTTTTTTTTTTTTTTTTTGT

mRNA sequence

ATGCCTCTATTGATTCCAATAACCTTGGATATGGCTGTTGAATTTCAATCCAGAGATTCTGACCTATGGAAGCACATTTATGCAGATGAGTACATGAAATGTAAAGTGATAGAGTGTTGTGAATCTTTAAAAAATGTCCTGAATGTTCTGGCAGTTGGAGAAAATGAGAAAAGATTCCAAGCTACATTCCTACTTATTGAACCAAACATCATCAAATAATCATAGTTCTTTCGTTTTTGTCAGTTGCAGTTTTTTTTTTTTTTTTTTTTTGT

Coding sequence (CDS)

ATGCCTCTATTGATTCCAATAACCTTGGATATGGCTGTTGAATTTCAATCCAGAGATTCTGACCTATGGAAGCACATTTATGCAGATGAGTACATGAAATGTAAAGTGATAGAGTGTTGTGAATCTTTAAAAAATGTCCTGAATGTTCTGGCAGTTGGAGAAAATGAGAAAAGATTCCAAGCTACATTCCTACTTATTGAACCAAACATCATCAAATAA

Protein sequence

MPLLIPITLDMAVEFQSRDSDLWKHIYADEYMKCKVIECCESLKNVLNVLAVGENEKRFQATFLLIEPNIIK
BLAST of CsGy5G013210 vs. NCBI nr
Match: KGN62150.1 (hypothetical protein Csa_2G302170 [Cucumis sativus])

HSP 1 Score: 100.5 bits (249), Expect = 2.4e-18
Identity = 51/69 (73.91%), Postives = 54/69 (78.26%), Query Frame = 0

Query: 5  IPITLDMAVEFQSRDSDLWKHIYADEYMKCKVIECCESLKNVLNVLAVGENEKRFQATFL 64
          IPI LDMA EF+SRDSDLWK I ADEYMKC VIEC ES KNVLNVL VGENEKR  AT +
Sbjct: 28 IPIALDMAAEFRSRDSDLWKRICADEYMKCAVIECYESFKNVLNVLVVGENEKRIIATII 87

Query: 65 L-IEPNIIK 73
            +E NI K
Sbjct: 88 KEVEDNISK 96

BLAST of CsGy5G013210 vs. NCBI nr
Match: XP_011649402.1 (PREDICTED: callose synthase 5-like [Cucumis sativus])

HSP 1 Score: 100.5 bits (249), Expect = 2.4e-18
Identity = 51/69 (73.91%), Postives = 54/69 (78.26%), Query Frame = 0

Query: 5   IPITLDMAVEFQSRDSDLWKHIYADEYMKCKVIECCESLKNVLNVLAVGENEKRFQATFL 64
           IPI LDMA EF+SRDSDLWK I ADEYMKC VIEC ES KNVLNVL VGENEKR  AT +
Sbjct: 855 IPIALDMAAEFRSRDSDLWKRICADEYMKCAVIECYESFKNVLNVLVVGENEKRIIATII 914

Query: 65  L-IEPNIIK 73
             +E NI K
Sbjct: 915 KEVEDNISK 923

BLAST of CsGy5G013210 vs. NCBI nr
Match: XP_008460894.1 (PREDICTED: callose synthase 5 [Cucumis melo])

HSP 1 Score: 98.6 bits (244), Expect = 9.2e-18
Identity = 50/69 (72.46%), Postives = 53/69 (76.81%), Query Frame = 0

Query: 5   IPITLDMAVEFQSRDSDLWKHIYADEYMKCKVIECCESLKNVLNVLAVGENEKRFQATFL 64
           IPI LDMA EF+SRDSDLWK I ADEYMKC VIEC ES KNVLNVL VGENEKR  A  +
Sbjct: 855 IPIALDMAAEFRSRDSDLWKRICADEYMKCAVIECYESFKNVLNVLVVGENEKRIIAAII 914

Query: 65  L-IEPNIIK 73
             +E NI K
Sbjct: 915 KEVEDNISK 923

BLAST of CsGy5G013210 vs. NCBI nr
Match: XP_022947858.1 (callose synthase 5 [Cucurbita moschata])

HSP 1 Score: 98.6 bits (244), Expect = 9.2e-18
Identity = 50/69 (72.46%), Postives = 53/69 (76.81%), Query Frame = 0

Query: 5   IPITLDMAVEFQSRDSDLWKHIYADEYMKCKVIECCESLKNVLNVLAVGENEKRFQATFL 64
           IPI LDMA EF+SRDSDLWK I ADEYMKC VIEC ES KNVLNVL VGENEKR   T +
Sbjct: 855 IPIALDMAAEFRSRDSDLWKRICADEYMKCAVIECYESFKNVLNVLVVGENEKRIIGTII 914

Query: 65  L-IEPNIIK 73
             +E NI K
Sbjct: 915 KEVENNISK 923

BLAST of CsGy5G013210 vs. NCBI nr
Match: XP_023007270.1 (callose synthase 5 [Cucurbita maxima])

HSP 1 Score: 98.6 bits (244), Expect = 9.2e-18
Identity = 50/69 (72.46%), Postives = 53/69 (76.81%), Query Frame = 0

Query: 5   IPITLDMAVEFQSRDSDLWKHIYADEYMKCKVIECCESLKNVLNVLAVGENEKRFQATFL 64
           IPI LDMA EF+SRDSDLWK I ADEYMKC VIEC ES KNVLNVL VGENEKR   T +
Sbjct: 855 IPIALDMAAEFRSRDSDLWKRICADEYMKCAVIECYESFKNVLNVLVVGENEKRIIGTII 914

Query: 65  L-IEPNIIK 73
             +E NI K
Sbjct: 915 KEVENNISK 923

BLAST of CsGy5G013210 vs. TAIR10
Match: AT2G13680.1 (callose synthase 5)

HSP 1 Score: 88.6 bits (218), Expect = 1.7e-18
Identity = 43/69 (62.32%), Postives = 51/69 (73.91%), Query Frame = 0

Query: 5   IPITLDMAVEFQSRDSDLWKHIYADEYMKCKVIECCESLKNVLNVLAVGENEKRFQATFL 64
           IPI LDMA +F++RDSDLWK I ADEYMKC VIEC ES K+VL+ L +GENEKR     +
Sbjct: 858 IPIALDMAAQFRTRDSDLWKRICADEYMKCAVIECYESFKHVLHTLVIGENEKRIIGIII 917

Query: 65  L-IEPNIIK 73
             +E NI K
Sbjct: 918 KEVESNISK 926

BLAST of CsGy5G013210 vs. TAIR10
Match: AT2G31960.1 (glucan synthase-like 3)

HSP 1 Score: 56.2 bits (134), Expect = 9.5e-09
Identity = 26/52 (50.00%), Postives = 32/52 (61.54%), Query Frame = 0

Query: 5   IPITLDMAVEFQSRDSDLWKHIYADEYMKCKVIECCESLKNVLNVLAVGENE 57
           IPI LDMA +   +D +L K +  D YM C V EC  S KN++N L VGE E
Sbjct: 861 IPIALDMAKDSNGKDRELTKRLSVDSYMTCAVRECYASFKNLINFLVVGERE 912

BLAST of CsGy5G013210 vs. TAIR10
Match: AT1G05570.1 (callose synthase 1)

HSP 1 Score: 55.8 bits (133), Expect = 1.2e-08
Identity = 26/52 (50.00%), Postives = 32/52 (61.54%), Query Frame = 0

Query: 5   IPITLDMAVEFQSRDSDLWKHIYADEYMKCKVIECCESLKNVLNVLAVGENE 57
           IPI LDMA +   +D +L K +  D YM C V EC  S KN++N L VGE E
Sbjct: 861 IPIALDMAKDSNGKDRELKKRLAVDSYMTCAVRECYASFKNLINYLVVGERE 912

BLAST of CsGy5G013210 vs. TAIR10
Match: AT5G13000.1 (glucan synthase-like 12)

HSP 1 Score: 54.3 bits (129), Expect = 3.6e-08
Identity = 25/53 (47.17%), Postives = 32/53 (60.38%), Query Frame = 0

Query: 5   IPITLDMAVEFQSRDSDLWKHIYADEYMKCKVIECCESLKNVLNVLAVGENEK 58
           IPI LDMA +   +D +L K I +D YMKC V EC  S KN++  +  G  EK
Sbjct: 867 IPIALDMAKDSNGKDRELKKRIESDTYMKCAVRECYASFKNIIKFVVQGNREK 919

BLAST of CsGy5G013210 vs. TAIR10
Match: AT3G14570.1 (glucan synthase-like 4)

HSP 1 Score: 47.8 bits (112), Expect = 3.4e-06
Identity = 23/50 (46.00%), Postives = 32/50 (64.00%), Query Frame = 0

Query: 9   LDMAVEFQSRDSDLWKHIYADEYMKCKVIECCESLKNVLNVLAVGENEKR 59
           L +A +F  +D  L++ I  DEYM   V EC ESLK +L +L VG+ EK+
Sbjct: 910 LSIAKDFVGKDEVLYRRIRKDEYMYYAVKECYESLKYILQILVVGDLEKK 959

BLAST of CsGy5G013210 vs. Swiss-Prot
Match: sp|Q3B724|CALS5_ARATH (Callose synthase 5 OS=Arabidopsis thaliana OX=3702 GN=CALS5 PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 3.1e-17
Identity = 43/69 (62.32%), Postives = 51/69 (73.91%), Query Frame = 0

Query: 5   IPITLDMAVEFQSRDSDLWKHIYADEYMKCKVIECCESLKNVLNVLAVGENEKRFQATFL 64
           IPI LDMA +F++RDSDLWK I ADEYMKC VIEC ES K+VL+ L +GENEKR     +
Sbjct: 858 IPIALDMAAQFRTRDSDLWKRICADEYMKCAVIECYESFKHVLHTLVIGENEKRIIGIII 917

Query: 65  L-IEPNIIK 73
             +E NI K
Sbjct: 918 KEVESNISK 926

BLAST of CsGy5G013210 vs. Swiss-Prot
Match: sp|Q9SL03|CALS2_ARATH (Callose synthase 2 OS=Arabidopsis thaliana OX=3702 GN=CALS2 PE=2 SV=3)

HSP 1 Score: 56.2 bits (134), Expect = 1.7e-07
Identity = 26/52 (50.00%), Postives = 32/52 (61.54%), Query Frame = 0

Query: 5   IPITLDMAVEFQSRDSDLWKHIYADEYMKCKVIECCESLKNVLNVLAVGENE 57
           IPI LDMA +   +D +L K +  D YM C V EC  S KN++N L VGE E
Sbjct: 861 IPIALDMAKDSNGKDRELTKRLSVDSYMTCAVRECYASFKNLINFLVVGERE 912

BLAST of CsGy5G013210 vs. Swiss-Prot
Match: sp|Q9AUE0|CALS1_ARATH (Callose synthase 1 OS=Arabidopsis thaliana OX=3702 GN=CALS1 PE=1 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 2.2e-07
Identity = 26/52 (50.00%), Postives = 32/52 (61.54%), Query Frame = 0

Query: 5   IPITLDMAVEFQSRDSDLWKHIYADEYMKCKVIECCESLKNVLNVLAVGENE 57
           IPI LDMA +   +D +L K +  D YM C V EC  S KN++N L VGE E
Sbjct: 861 IPIALDMAKDSNGKDRELKKRLAVDSYMTCAVRECYASFKNLINYLVVGERE 912

BLAST of CsGy5G013210 vs. Swiss-Prot
Match: sp|Q9LXT9|CALS3_ARATH (Callose synthase 3 OS=Arabidopsis thaliana OX=3702 GN=CALS3 PE=3 SV=3)

HSP 1 Score: 54.3 bits (129), Expect = 6.5e-07
Identity = 25/53 (47.17%), Postives = 32/53 (60.38%), Query Frame = 0

Query: 5   IPITLDMAVEFQSRDSDLWKHIYADEYMKCKVIECCESLKNVLNVLAVGENEK 58
           IPI LDMA +   +D +L K I +D YMKC V EC  S KN++  +  G  EK
Sbjct: 867 IPIALDMAKDSNGKDRELKKRIESDTYMKCAVRECYASFKNIIKFVVQGNREK 919

BLAST of CsGy5G013210 vs. Swiss-Prot
Match: sp|Q9LUD7|CALS8_ARATH (Putative callose synthase 8 OS=Arabidopsis thaliana OX=3702 GN=CALS8 PE=3 SV=2)

HSP 1 Score: 47.8 bits (112), Expect = 6.1e-05
Identity = 23/50 (46.00%), Postives = 32/50 (64.00%), Query Frame = 0

Query: 9   LDMAVEFQSRDSDLWKHIYADEYMKCKVIECCESLKNVLNVLAVGENEKR 59
           L +A +F  +D  L++ I  DEYM   V EC ESLK +L +L VG+ EK+
Sbjct: 910 LSIAKDFVGKDEVLYRRIRKDEYMYYAVKECYESLKYILQILVVGDLEKK 959

BLAST of CsGy5G013210 vs. TrEMBL
Match: tr|A0A0A0LJS7|A0A0A0LJS7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G302170 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.6e-18
Identity = 51/69 (73.91%), Postives = 54/69 (78.26%), Query Frame = 0

Query: 5  IPITLDMAVEFQSRDSDLWKHIYADEYMKCKVIECCESLKNVLNVLAVGENEKRFQATFL 64
          IPI LDMA EF+SRDSDLWK I ADEYMKC VIEC ES KNVLNVL VGENEKR  AT +
Sbjct: 28 IPIALDMAAEFRSRDSDLWKRICADEYMKCAVIECYESFKNVLNVLVVGENEKRIIATII 87

Query: 65 L-IEPNIIK 73
            +E NI K
Sbjct: 88 KEVEDNISK 96

BLAST of CsGy5G013210 vs. TrEMBL
Match: tr|A0A1S3CDY0|A0A1S3CDY0_CUCME (callose synthase 5 OS=Cucumis melo OX=3656 GN=LOC103499636 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 6.1e-18
Identity = 50/69 (72.46%), Postives = 53/69 (76.81%), Query Frame = 0

Query: 5   IPITLDMAVEFQSRDSDLWKHIYADEYMKCKVIECCESLKNVLNVLAVGENEKRFQATFL 64
           IPI LDMA EF+SRDSDLWK I ADEYMKC VIEC ES KNVLNVL VGENEKR  A  +
Sbjct: 855 IPIALDMAAEFRSRDSDLWKRICADEYMKCAVIECYESFKNVLNVLVVGENEKRIIAAII 914

Query: 65  L-IEPNIIK 73
             +E NI K
Sbjct: 915 KEVEDNISK 923

BLAST of CsGy5G013210 vs. TrEMBL
Match: tr|A0A1S4E305|A0A1S4E305_CUCME (callose synthase 5-like OS=Cucumis melo OX=3656 GN=LOC103499639 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.0e-17
Identity = 50/69 (72.46%), Postives = 53/69 (76.81%), Query Frame = 0

Query: 5   IPITLDMAVEFQSRDSDLWKHIYADEYMKCKVIECCESLKNVLNVLAVGENEKRFQATFL 64
           IPI LDMA EF+SRDSDLWK I ADEYMKC VIEC ES KNVLNVL VGENEKR   T +
Sbjct: 655 IPIALDMAAEFRSRDSDLWKRICADEYMKCAVIECYESFKNVLNVLVVGENEKRIIGTII 714

Query: 65  L-IEPNIIK 73
             +E NI K
Sbjct: 715 KEVENNIGK 723

BLAST of CsGy5G013210 vs. TrEMBL
Match: tr|A0A2H3YQ88|A0A2H3YQ88_PHODC (callose synthase 5-like OS=Phoenix dactylifera OX=42345 GN=LOC103715871 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.3e-16
Identity = 46/69 (66.67%), Postives = 53/69 (76.81%), Query Frame = 0

Query: 5   IPITLDMAVEFQSRDSDLWKHIYADEYMKCKVIECCESLKNVLNVLAVGENEKRFQATFL 64
           IPI LDMAV+FQS+DSDLWK I ADEYMKC ++EC ES K VLN+L VGENEKR  +  +
Sbjct: 890 IPIALDMAVQFQSKDSDLWKRICADEYMKCAILECYESFKLVLNLLVVGENEKRIISIII 949

Query: 65  L-IEPNIIK 73
             IE NI K
Sbjct: 950 KEIEANIAK 958

BLAST of CsGy5G013210 vs. TrEMBL
Match: tr|M0RKY8|M0RKY8_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis OX=214687 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 5.7e-16
Identity = 42/61 (68.85%), Postives = 48/61 (78.69%), Query Frame = 0

Query: 5   IPITLDMAVEFQSRDSDLWKHIYADEYMKCKVIECCESLKNVLNVLAVGENEKRFQATFL 64
           IPI LDMA +FQS+DSDLWK I ADEYMKC VIEC ES K +LN+L +GENEKR+    L
Sbjct: 864 IPIALDMAAQFQSKDSDLWKRICADEYMKCAVIECYESFKLILNLLVIGENEKRYGTNLL 923

Query: 65  L 66
           L
Sbjct: 924 L 924

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN62150.12.4e-1873.91hypothetical protein Csa_2G302170 [Cucumis sativus][more]
XP_011649402.12.4e-1873.91PREDICTED: callose synthase 5-like [Cucumis sativus][more]
XP_008460894.19.2e-1872.46PREDICTED: callose synthase 5 [Cucumis melo][more]
XP_022947858.19.2e-1872.46callose synthase 5 [Cucurbita moschata][more]
XP_023007270.19.2e-1872.46callose synthase 5 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT2G13680.11.7e-1862.32callose synthase 5[more]
AT2G31960.19.5e-0950.00glucan synthase-like 3[more]
AT1G05570.11.2e-0850.00callose synthase 1[more]
AT5G13000.13.6e-0847.17glucan synthase-like 12[more]
AT3G14570.13.4e-0646.00glucan synthase-like 4[more]
Match NameE-valueIdentityDescription
sp|Q3B724|CALS5_ARATH3.1e-1762.32Callose synthase 5 OS=Arabidopsis thaliana OX=3702 GN=CALS5 PE=1 SV=1[more]
sp|Q9SL03|CALS2_ARATH1.7e-0750.00Callose synthase 2 OS=Arabidopsis thaliana OX=3702 GN=CALS2 PE=2 SV=3[more]
sp|Q9AUE0|CALS1_ARATH2.2e-0750.00Callose synthase 1 OS=Arabidopsis thaliana OX=3702 GN=CALS1 PE=1 SV=2[more]
sp|Q9LXT9|CALS3_ARATH6.5e-0747.17Callose synthase 3 OS=Arabidopsis thaliana OX=3702 GN=CALS3 PE=3 SV=3[more]
sp|Q9LUD7|CALS8_ARATH6.1e-0546.00Putative callose synthase 8 OS=Arabidopsis thaliana OX=3702 GN=CALS8 PE=3 SV=2[more]
Match NameE-valueIdentityDescription
tr|A0A0A0LJS7|A0A0A0LJS7_CUCSA1.6e-1873.91Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G302170 PE=4 SV=1[more]
tr|A0A1S3CDY0|A0A1S3CDY0_CUCME6.1e-1872.46callose synthase 5 OS=Cucumis melo OX=3656 GN=LOC103499636 PE=4 SV=1[more]
tr|A0A1S4E305|A0A1S4E305_CUCME1.0e-1772.46callose synthase 5-like OS=Cucumis melo OX=3656 GN=LOC103499639 PE=4 SV=1[more]
tr|A0A2H3YQ88|A0A2H3YQ88_PHODC3.3e-1666.67callose synthase 5-like OS=Phoenix dactylifera OX=42345 GN=LOC103715871 PE=4 SV=... [more]
tr|M0RKY8|M0RKY8_MUSAM5.7e-1668.85Uncharacterized protein OS=Musa acuminata subsp. malaccensis OX=214687 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006075 (1->3)-beta-D-glucan biosynthetic process
cellular_component GO:0000148 1,3-beta-D-glucan synthase complex
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003843 1,3-beta-D-glucan synthase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G013210.1CsGy5G013210.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12741:SF29CALLOSE SYNTHASE 5coord: 5..70
NoneNo IPR availablePANTHERPTHR12741LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1coord: 5..70

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy5G013210CsaV3_5G020060Cucumber (Chinese Long) v3cgybcucB232
The following gene(s) are paralogous to this gene:

None