CsGy5G013210 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTCTATTGGTTGAAAAATGAAAACTTGTGTTTTTGTGATAGGTTGACTTTGTTATTAGTTAGGTTACTTCAGTTGTTGGTTCATAAGCATATTGTGGTAGTTACTGCTAGTTGTCTTGTGTATGTTTGCACTTCATCCATTTTTTTTAATGACTTTTGCTTCTTCTATGTCTTGGAGTTCTTTTGTTTCGTATGGGCTAGGGTATTTTGTATATTCTATATATTCCAATACTAGTTCTGTTTGAACTATTTGCAGCCCACAATTGGTGAAATTTCTTCAATATCAGATAAAAGTATCTTGTCAAATCTCTTGGGGAAGACAATAAAGTTAGAAATAGAGGATTAGGAGACACACCCATAGAGTTTATTAGAACTCTTGCCTAAAAATTAGAATTCTTCGTTCCAAGCATCCTTCTAATTATAATTTTAAAACTAAACTGAATTTTTAAATGAAACAGGGAGATGGATCTCTTGCTAGTTCCTTATTCCTCAGATCCCAGCCTAAAAATAATCCAAATGCCTCCCTTTTTACTAGCCAGCAAGGTCAATATAGCCCCTTTATGTTTTCTTTTAATTTTTAGGCATACTTATAGCAAATATTAACAATTTTTCTACTGCTACAGATTCCAATAACCTTGGATATGGCTGTTGAATTTCAATCCAGAGATTCTGACCTATGGAAGCACATTTATGCAGATGAGTACATGAAATGTAAAGTGATAGAGTGTTGTGAATCTTTAAAAAATGTCCTGAATGTTCTGGCAGTTGGAGAAAATGAGAAAAGATTCCAAGCTACATTCCTACTTATTGAACCAAACATCATCAAATAATCATAGTTCTTTCGTTTTTGTCAGTTGCAGTTTTTTTTTTTTTTTTTTTTTGT ATGCCTCTATTGATTCCAATAACCTTGGATATGGCTGTTGAATTTCAATCCAGAGATTCTGACCTATGGAAGCACATTTATGCAGATGAGTACATGAAATGTAAAGTGATAGAGTGTTGTGAATCTTTAAAAAATGTCCTGAATGTTCTGGCAGTTGGAGAAAATGAGAAAAGATTCCAAGCTACATTCCTACTTATTGAACCAAACATCATCAAATAATCATAGTTCTTTCGTTTTTGTCAGTTGCAGTTTTTTTTTTTTTTTTTTTTTGT ATGCCTCTATTGATTCCAATAACCTTGGATATGGCTGTTGAATTTCAATCCAGAGATTCTGACCTATGGAAGCACATTTATGCAGATGAGTACATGAAATGTAAAGTGATAGAGTGTTGTGAATCTTTAAAAAATGTCCTGAATGTTCTGGCAGTTGGAGAAAATGAGAAAAGATTCCAAGCTACATTCCTACTTATTGAACCAAACATCATCAAATAA MPLLIPITLDMAVEFQSRDSDLWKHIYADEYMKCKVIECCESLKNVLNVLAVGENEKRFQATFLLIEPNIIK
BLAST of CsGy5G013210 vs. NCBI nr
Match: KGN62150.1 (hypothetical protein Csa_2G302170 [Cucumis sativus]) HSP 1 Score: 100.5 bits (249), Expect = 2.4e-18 Identity = 51/69 (73.91%), Postives = 54/69 (78.26%), Query Frame = 0
BLAST of CsGy5G013210 vs. NCBI nr
Match: XP_011649402.1 (PREDICTED: callose synthase 5-like [Cucumis sativus]) HSP 1 Score: 100.5 bits (249), Expect = 2.4e-18 Identity = 51/69 (73.91%), Postives = 54/69 (78.26%), Query Frame = 0
BLAST of CsGy5G013210 vs. NCBI nr
Match: XP_008460894.1 (PREDICTED: callose synthase 5 [Cucumis melo]) HSP 1 Score: 98.6 bits (244), Expect = 9.2e-18 Identity = 50/69 (72.46%), Postives = 53/69 (76.81%), Query Frame = 0
BLAST of CsGy5G013210 vs. NCBI nr
Match: XP_022947858.1 (callose synthase 5 [Cucurbita moschata]) HSP 1 Score: 98.6 bits (244), Expect = 9.2e-18 Identity = 50/69 (72.46%), Postives = 53/69 (76.81%), Query Frame = 0
BLAST of CsGy5G013210 vs. NCBI nr
Match: XP_023007270.1 (callose synthase 5 [Cucurbita maxima]) HSP 1 Score: 98.6 bits (244), Expect = 9.2e-18 Identity = 50/69 (72.46%), Postives = 53/69 (76.81%), Query Frame = 0
BLAST of CsGy5G013210 vs. TAIR10
Match: AT2G13680.1 (callose synthase 5) HSP 1 Score: 88.6 bits (218), Expect = 1.7e-18 Identity = 43/69 (62.32%), Postives = 51/69 (73.91%), Query Frame = 0
BLAST of CsGy5G013210 vs. TAIR10
Match: AT2G31960.1 (glucan synthase-like 3) HSP 1 Score: 56.2 bits (134), Expect = 9.5e-09 Identity = 26/52 (50.00%), Postives = 32/52 (61.54%), Query Frame = 0
BLAST of CsGy5G013210 vs. TAIR10
Match: AT1G05570.1 (callose synthase 1) HSP 1 Score: 55.8 bits (133), Expect = 1.2e-08 Identity = 26/52 (50.00%), Postives = 32/52 (61.54%), Query Frame = 0
BLAST of CsGy5G013210 vs. TAIR10
Match: AT5G13000.1 (glucan synthase-like 12) HSP 1 Score: 54.3 bits (129), Expect = 3.6e-08 Identity = 25/53 (47.17%), Postives = 32/53 (60.38%), Query Frame = 0
BLAST of CsGy5G013210 vs. TAIR10
Match: AT3G14570.1 (glucan synthase-like 4) HSP 1 Score: 47.8 bits (112), Expect = 3.4e-06 Identity = 23/50 (46.00%), Postives = 32/50 (64.00%), Query Frame = 0
BLAST of CsGy5G013210 vs. Swiss-Prot
Match: sp|Q3B724|CALS5_ARATH (Callose synthase 5 OS=Arabidopsis thaliana OX=3702 GN=CALS5 PE=1 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 3.1e-17 Identity = 43/69 (62.32%), Postives = 51/69 (73.91%), Query Frame = 0
BLAST of CsGy5G013210 vs. Swiss-Prot
Match: sp|Q9SL03|CALS2_ARATH (Callose synthase 2 OS=Arabidopsis thaliana OX=3702 GN=CALS2 PE=2 SV=3) HSP 1 Score: 56.2 bits (134), Expect = 1.7e-07 Identity = 26/52 (50.00%), Postives = 32/52 (61.54%), Query Frame = 0
BLAST of CsGy5G013210 vs. Swiss-Prot
Match: sp|Q9AUE0|CALS1_ARATH (Callose synthase 1 OS=Arabidopsis thaliana OX=3702 GN=CALS1 PE=1 SV=2) HSP 1 Score: 55.8 bits (133), Expect = 2.2e-07 Identity = 26/52 (50.00%), Postives = 32/52 (61.54%), Query Frame = 0
BLAST of CsGy5G013210 vs. Swiss-Prot
Match: sp|Q9LXT9|CALS3_ARATH (Callose synthase 3 OS=Arabidopsis thaliana OX=3702 GN=CALS3 PE=3 SV=3) HSP 1 Score: 54.3 bits (129), Expect = 6.5e-07 Identity = 25/53 (47.17%), Postives = 32/53 (60.38%), Query Frame = 0
BLAST of CsGy5G013210 vs. Swiss-Prot
Match: sp|Q9LUD7|CALS8_ARATH (Putative callose synthase 8 OS=Arabidopsis thaliana OX=3702 GN=CALS8 PE=3 SV=2) HSP 1 Score: 47.8 bits (112), Expect = 6.1e-05 Identity = 23/50 (46.00%), Postives = 32/50 (64.00%), Query Frame = 0
BLAST of CsGy5G013210 vs. TrEMBL
Match: tr|A0A0A0LJS7|A0A0A0LJS7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G302170 PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 1.6e-18 Identity = 51/69 (73.91%), Postives = 54/69 (78.26%), Query Frame = 0
BLAST of CsGy5G013210 vs. TrEMBL
Match: tr|A0A1S3CDY0|A0A1S3CDY0_CUCME (callose synthase 5 OS=Cucumis melo OX=3656 GN=LOC103499636 PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 6.1e-18 Identity = 50/69 (72.46%), Postives = 53/69 (76.81%), Query Frame = 0
BLAST of CsGy5G013210 vs. TrEMBL
Match: tr|A0A1S4E305|A0A1S4E305_CUCME (callose synthase 5-like OS=Cucumis melo OX=3656 GN=LOC103499639 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 1.0e-17 Identity = 50/69 (72.46%), Postives = 53/69 (76.81%), Query Frame = 0
BLAST of CsGy5G013210 vs. TrEMBL
Match: tr|A0A2H3YQ88|A0A2H3YQ88_PHODC (callose synthase 5-like OS=Phoenix dactylifera OX=42345 GN=LOC103715871 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 3.3e-16 Identity = 46/69 (66.67%), Postives = 53/69 (76.81%), Query Frame = 0
BLAST of CsGy5G013210 vs. TrEMBL
Match: tr|M0RKY8|M0RKY8_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis OX=214687 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 5.7e-16 Identity = 42/61 (68.85%), Postives = 48/61 (78.69%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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