CsGy5G012960 (gene) Cucumber (Gy14) v2

NameCsGy5G012960
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUnknown Protein
LocationChr5 : 15449317 .. 15450009 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAGGAGGAAGAGGACGAAGAGGAAGAGGAAGACGACGACGAAGATGACGAGGACGACGAAGAAGACGAAGAGGATGAAGAAGACGAAGAGGAAGAAGAAGACGAAGAAGGAGAAGAAGACGAAGAAGGAGAAGACGAAGAAGACGACGACGAAGAGGAAGAAGAAGACGACGAAGAGGAAGAAGAAGACGAAGAAGAAGAAGAAGGAGGAGGAGAAGAAGGAGGAGGAGAAGGAGGAGGAGAAGGAGGAGAAGAAGGAGGAGAAGAAGGAGAAGAAGGAGGAGAAGAAGGAGAAGAAGGAGGAGGAGGAGGAGAAGAAGAAGAAGAAGGAGAAGAAGGAGAAGAAGAAGGAGAAGAAGAAGAAGAAGAAGGAGAAGAAGGAGAAGAAGAAGAAGCAGGAGAAGGAGAAGGAGGAGAAGGAGGAGAAGAAGGAGAAGGAGGAGAAGAAGGAGAAGAAGGAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGGAGGAGGAGAAGGAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAGGAGGAGAAGGAGAAGGAGAAGGAGAAGGAGGAGAAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGAAGAAGGAGAAGAAGGAGAAGGAGAAGGAGAAGGAGAAGAAGGAGAAGAAGATGA

mRNA sequence

ATGAAGAGGAGGAAGAGGACGAAGAGGAAGAGGAAGACGACGACGAAGATGACGAGGACGACGAAGAAGACGAAGAGGATGAAGAAGACGAAGAGGAAGAAGAAGACGAAGAAGGAGAAGAAGACGAAGAAGGAGAAGACGAAGAAGACGACGACGAAGAGGAAGAAGAAGACGACGAAGAGGAAGAAGAAGACGAAGAAGAAGAAGAAGGAGGAGGAGAAGAAGGAGGAGGAGAAGGAGGAGGAGAAGGAGGAGAAGAAGGAGGAGAAGAAGGAGAAGAAGGAGGAGAAGAAGGAGAAGAAGGAGGAGGAGGAGGAGAAGAAGAAGAAGAAGGAGAAGAAGGAGAAGAAGAAGGAGAAGAAGAAGAAGAAGAAGGAGAAGAAGGAGAAGAAGAAGAAGCAGGAGAAGGAGAAGGAGGAGAAGGAGGAGAAGAAGGAGAAGGAGGAGAAGAAGGAGAAGAAGGAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGGAGGAGGAGAAGGAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAGGAGGAGAAGGAGAAGGAGAAGGAGAAGGAGGAGAAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGAAGAAGGAGAAGAAGGAGAAGGAGAAGGAGAAGGAGAAGAAGGAGAAGAAGATGA

Coding sequence (CDS)

ATGAAGAGGAGGAAGAGGACGAAGAGGAAGAGGAAGACGACGACGAAGATGACGAGGACGACGAAGAAGACGAAGAGGATGAAGAAGACGAAGAGGAAGAAGAAGACGAAGAAGGAGAAGAAGACGAAGAAGGAGAAGACGAAGAAGACGACGACGAAGAGGAAGAAGAAGACGACGAAGAGGAAGAAGAAGACGAAGAAGAAGAAGAAGGAGGAGGAGAAGAAGGAGGAGGAGAAGGAGGAGGAGAAGGAGGAGAAGAAGGAGGAGAAGAAGGAGAAGAAGGAGGAGAAGAAGGAGAAGAAGGAGGAGGAGGAGGAGAAGAAGAAGAAGAAGGAGAAGAAGGAGAAGAAGAAGGAGAAGAAGAAGAAGAAGAAGGAGAAGAAGGAGAAGAAGAAGAAGCAGGAGAAGGAGAAGGAGGAGAAGGAGGAGAAGAAGGAGAAGGAGGAGAAGAAGGAGAAGAAGGAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGGAGGAGGAGAAGGAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAGGAGGAGAAGGAGAAGGAGAAGGAGAAGGAGGAGAAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGAAGAAGGAGAAGAAGGAGAAGGAGAAGGAGAAGGAGAAGAAGGAGAAGAAGATGA

Protein sequence

MKRRKRTKRKRKTTTKMTRTTKKTKRMKKTKRKKKTKKEKKTKKEKTKKTTTKRKKKTTKRKKKTKKKKKEEEKKEEEKEEEKEEKKEEKKEKKEEKKEKKEEEEEKKKKKEKKEKKKEKKKKKKEKKEKKKKQEKEKEEKEEKKEKEEKKEKKEEKEKEKEKEKEEEEKEKEEEEEEEEEEEEEEERRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006334nucleosome assembly
Vocabulary: Cellular Component
TermDefinition
GO:0000786nucleosome
Vocabulary: INTERPRO
TermDefinition
IPR005819Histone_H5
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006334 nucleosome assembly
cellular_component GO:0005575 cellular_component
cellular_component GO:0000786 nucleosome
molecular_function GO:0003674 molecular_function
molecular_function GO:0003677 DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G012960.1CsGy5G012960.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 27..47
NoneNo IPR availableCOILSCoilCoilcoord: 55..197
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 169..184
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..131
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 132..168
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..112
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..230
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..69
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..230
IPR005819Histone H5PRINTSPR00624HISTONEH5coord: 62..76
score: 35.56
coord: 123..142
score: 23.33
coord: 25..49
score: 23.56
coord: 101..118
score: 41.98