CsGy5G012900 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy5G012900
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	probable disease resistance protein isoform X2
Location	Chr5 : 15429365 .. 15430141 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGTATTATTCCCAAGATTAAGATTTTTGGCAACTAGCTCAGGAAGAAGTTGTTCGCTTGGATGGAAATCATTTCCCACACTTGAAGATGTCCATTTACGTGGTTTCAAAGATGATGGCACGGTCAGTTTGCCAAAGGAGTTGACTGAATTATTATATAGAATTAAGGTACTCTCGATTATAAATTCCATTGAATTGGTGCGAGTATTCCCAAATAGAGAAGATCAAAGTGGTGCAGAATTGAAGCATTTAACGTTACGTACGTAATCTTCCTAAGCTTACACAGGGGTGGGAGGAGGATACTGATCAAAGCTTTGATAGTTTGGAATATATTTATGTGGACGGATGTGATATAATTTGAAGTGTTTGCTACCATTATCAATCACATTCTCCAACTTAACATATGTTGGAGTTACAGATTGCAATGGATTGGTGAATCTGTTTAGCTGTTTGGTGGCAAAAAGTCTAGTGAATCTCAAGAGATTGAGCATAAGTAAGTGTACAAAAATGCGTTATATAGTTGCAGCGCCTGAAGGAGATGCAGACGAAGAAAATGAGGAAGAAATTATTTTCAATCAACTGAATTATTTGGAGTTGTATAATTTACCAAAATTGACCAACTTTCACTCTGGAAAATGTATACTTAAGTATGTCTGCTTGGAGAGGTTGGACATAGAAGGATGCCCTGAAGTAAAGAAAATTCCAAACGAAACAGTTAGCACACCCAAGTTGCCATTTGTCACCACCTCATCCAATTATCGAAGAAGACGCTTGTGA

mRNA sequence

ATTGTATTATTCCCAAGATTAAGATTTTTGGCAACTAGCTCAGGAAGAAGTTGTTCGCTTGGATGGAAATCATTTCCCACACTTGAAGATGTCCATTTACGTGGTTTCAAAGATGATGGCACGGTCAGTTTGCCAAAGGAGTTGACTGAATTATTATATAGAATTAAGTGTTTGCTACCATTATCAATCACATTCTCCAACTTAACATATGTTGGAGTTACAGATTGCAATGGATTGGTGAATCTGTTTAGCTGTTTGGTGGCAAAAAGTCTAGTGAATCTCAAGAGATTGAGCATAAGTAAGTGTACAAAAATGCGTTATATAGTTGCAGCGCCTGAAGGAGATGCAGACGAAGAAAATGAGGAAGAAATTATTTTCAATCAACTGAATTATTTGGAGTTGTATAATTTACCAAAATTGACCAACTTTCACTCTGGAAAATGTATACTTAAGTATGTCTGCTTGGAGAGGTTGGACATAGAAGGATGCCCTGAAGTAAAGAAAATTCCAAACGAAACAGTTAGCACACCCAAGTTGCCATTTGTCACCACCTCATCCAATTATCGAAGAAGACGCTTGTGA

Coding sequence (CDS)

ATTGTATTATTCCCAAGATTAAGATTTTTGGCAACTAGCTCAGGAAGAAGTTGTTCGCTTGGATGGAAATCATTTCCCACACTTGAAGATGTCCATTTACGTGGTTTCAAAGATGATGGCACGGTCAGTTTGCCAAAGGAGTTGACTGAATTATTATATAGAATTAAGTGTTTGCTACCATTATCAATCACATTCTCCAACTTAACATATGTTGGAGTTACAGATTGCAATGGATTGGTGAATCTGTTTAGCTGTTTGGTGGCAAAAAGTCTAGTGAATCTCAAGAGATTGAGCATAAGTAAGTGTACAAAAATGCGTTATATAGTTGCAGCGCCTGAAGGAGATGCAGACGAAGAAAATGAGGAAGAAATTATTTTCAATCAACTGAATTATTTGGAGTTGTATAATTTACCAAAATTGACCAACTTTCACTCTGGAAAATGTATACTTAAGTATGTCTGCTTGGAGAGGTTGGACATAGAAGGATGCCCTGAAGTAAAGAAAATTCCAAACGAAACAGTTAGCACACCCAAGTTGCCATTTGTCACCACCTCATCCAATTATCGAAGAAGACGCTTGTGA

Protein sequence

IVLFPRLRFLATSSGRSCSLGWKSFPTLEDVHLRGFKDDGTVSLPKELTELLYRIKCLLPLSITFSNLTYVGVTDCNGLVNLFSCLVAKSLVNLKRLSISKCTKMRYIVAAPEGDADEENEEEIIFNQLNYLELYNLPKLTNFHSGKCILKYVCLERLDIEGCPEVKKIPNETVSTPKLPFVTTSSNYRRRRL

Homology

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BLAST of CsGy5G012900 vs. NCBI nr
Match: KGN65087.1 (hypothetical protein Csa_1G201770 [Cucumis sativus])

HSP 1 Score: 392.1 bits (1006), Expect = 1.1e-105
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 1   IVLFPRLRFLATSSGRSCSLGWKSFPTLEDVHLRGFKDDGTVSLPKELTELLYRIKCLLP 60
           IVLFPRLRFLATSSGRSCSLGWKSFPTLEDVHLRGFKDDGTVSLPKELTELLYRIKCLLP
Sbjct: 113 IVLFPRLRFLATSSGRSCSLGWKSFPTLEDVHLRGFKDDGTVSLPKELTELLYRIKCLLP 172

Query: 61  LSITFSNLTYVGVTDCNGLVNLFSCLVAKSLVNLKRLSISKCTKMRYIVAAPEGDADEEN 120
           LSITFSNLTYVGVTDCNGLVNLFSCLVAKSLVNLKRLSISKCTKMRYIVAAPEGDADEEN
Sbjct: 173 LSITFSNLTYVGVTDCNGLVNLFSCLVAKSLVNLKRLSISKCTKMRYIVAAPEGDADEEN 232

Query: 121 EEEIIFNQLNYLELYNLPKLTNFHSGKCILKYVCLERLDIEGCPEVKKIPNETVSTPKLP 180
           EEEIIFNQLNYLELYNLPKLTNFHSGKCILKYVCLERLDIEGCPEVKKIPNETVSTPKLP
Sbjct: 233 EEEIIFNQLNYLELYNLPKLTNFHSGKCILKYVCLERLDIEGCPEVKKIPNETVSTPKLP 292

Query: 181 FVTTSSNYRRRRL 194
           FVTTSSNYRRRRL
Sbjct: 293 FVTTSSNYRRRRL 305

[Close]

BLAST of CsGy5G012900 vs. NCBI nr
Match: XP_022143564.1 (probable disease resistance protein At4g27220 [Momordica charantia])

HSP 1 Score: 139.0 bits (349), Expect = 1.6e-29
Identity = 81/174 (46.55%), Postives = 110/174 (63.22%), Query Frame = 0


Query: 2    VLFPRLRFLATSSGRSCSLGWKSFPTLEDVHLRGFKDDGTVSLPKELTELLY-------- 61
            ++F  L+ L     RS      SFP L ++ L+G +DD  V+LP E+++ LY        
Sbjct: 981  IVFRSLQILEMVVKRSFWFRSGSFPKLHNLKLKGGEDDDLVTLPLEMSQELYNIEVKKCD 1040

Query: 62   RIKCLLPLSITFSNLTYVGVTDCNGLVNLFSCLVAKSLVNLKRLSISKCTKMRYIVAAPE 121
            ++K LLP S TF NL  + + DCNG++NLF+ LVAK+LVNL  + I  C  +  IVA   
Sbjct: 1041 KLKFLLPSSTTFFNLGSLIIEDCNGMMNLFNTLVAKNLVNLCLIKICDCRGITSIVAE-- 1100

Query: 122  GDADEENEEEIIFNQLNYLELYNLPKLTNFHSGKCILKYVCLERLDIEGCPEVK 168
             + +EE  EEIIFN L  LEL +LP+L NF+SGKC LK+  LERL IEGCP++K
Sbjct: 1101 -EVEEEEGEEIIFNHLIRLELRDLPRLANFYSGKCALKFPYLERLIIEGCPKMK 1151

[Close]

BLAST of CsGy5G012900 vs. NCBI nr
Match: XP_021674433.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC110660414 [Hevea brasiliensis])

HSP 1 Score: 114.4 bits (285), Expect = 4.3e-22
Identity = 60/134 (44.78%), Postives = 89/134 (66.42%), Query Frame = 0


Query: 54   RIKCLLPLSITFSNLTYVGVTDCNGLVNLFSCLVAKSLVNLKRLSISKCTKMRYIVAAPE 113
            R+K LLP +++F NLT + V++C GL+NL + + ++SLV L+R+ + KC  M+ IVA+  
Sbjct: 2423 RLKILLPFTVSFENLTTLEVSNCQGLINLMTSITSRSLVQLRRMKVEKCEMMQEIVAS-- 2482

Query: 114  GDADEENEEEIIFNQLNYLELYNLPKLTNFHSGKCILKYVCLERLDIEGCPEVKKIPNET 173
             + D+E EEEI F+QL YLEL++LP+LT+F SG     +  LE + I  CP +K    E 
Sbjct: 2483 -ETDDE-EEEICFSQLQYLELHDLPRLTSFCSGNPAFNFPSLEEVIIRACPNMKIFAKEV 2542

Query: 174  VSTPKLPFVTTSSN 188
            +STPKL  V T  +
Sbjct: 2543 LSTPKLWRVQTGKH 2552

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BLAST of CsGy5G012900 vs. NCBI nr
Match: XP_021674422.1 (uncharacterized protein LOC110660410 isoform X2 [Hevea brasiliensis])

HSP 1 Score: 111.3 bits (277), Expect = 3.7e-21
Identity = 59/134 (44.03%), Postives = 88/134 (65.67%), Query Frame = 0


Query: 54   RIKCLLPLSITFSNLTYVGVTDCNGLVNLFSCLVAKSLVNLKRLSISKCTKMRYIVAAPE 113
            R+K LLP +++F NLT + V++C GL+NL + + ++SLV L+R+ + KC  M+ IVA+  
Sbjct: 2447 RLKILLPFTVSFENLTTLEVSNCQGLINLMTSITSRSLVQLRRMKVEKCEMMQEIVAS-- 2506

Query: 114  GDADEENEEEIIFNQLNYLELYNLPKLTNFHSGKCILKYVCLERLDIEGCPEVKKIPNET 173
             + D+E EEEI F+QL YLEL++LP+LT+F  G     +  LE + I  CP +K    E 
Sbjct: 2507 -ETDDE-EEEICFSQLQYLELHDLPRLTSFCFGNPAFNFPSLEDVIIRACPNMKIFAKEV 2566

Query: 174  VSTPKLPFVTTSSN 188
            +STPKL  V T  +
Sbjct: 2567 LSTPKLWRVQTGKH 2576

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BLAST of CsGy5G012900 vs. NCBI nr
Match: XP_011650060.1 (PREDICTED: uncharacterized protein LOC105434705 [Cucumis sativus])

HSP 1 Score: 109.4 bits (272), Expect = 1.4e-20
Identity = 64/156 (41.03%), Postives = 92/156 (58.97%), Query Frame = 0


Query: 24  SFPTLEDVHLRGFKDDGTVSLPKELTELLYRIKCLLPLSITFSNLTYVGVTDCNGLVNLF 83
           SF +LE++ +RG ++                +KC+LP S+TF NL Y+ V  CN ++NLF
Sbjct: 111 SFDSLENIDIRGCEN----------------LKCILPSSVTFLNLKYLRVGGCNKMMNLF 170

Query: 84  SCLVAKSLVNLKRLSISKCTKMRYIVAAPEGDADEENEEEIIFNQLNYLELYNLPKLTNF 143
           S  VA++L NL+   I +C +MR IVAA EG   EE   EI+F  L  + LY LP+L +F
Sbjct: 171 SSSVAENLGNLESTVIHECREMRCIVAAEEG---EEENGEIVFKHLKEIILYGLPRLASF 230

Query: 144 HSGKCILKYVCLERLDIEGCPEVKKIPNETVSTPKL 180
            +GKC +K+  LE L I G  E++   +  +S PKL
Sbjct: 231 DNGKCTIKFPSLEVLYIYGSYEMETFSHGILSFPKL 247

[Close]

BLAST of CsGy5G012900 vs. TAIR10
Match: AT1G63350.1 (Disease resistance protein (CC-NBS-LRR class) family)

HSP 1 Score: 57.8 bits (138), Expect = 8.7e-09
Identity = 38/112 (33.93%), Postives = 61/112 (54.46%), Query Frame = 0


Query: 64  TFSNLTYVGVTDCNGLVNLFSCLVAKSLVNLKRLSISKCTKMRYIVAAPEGDADEENEEE 123
           +FS+L  V +++C  L  L   + A    NLKRL +    ++  I+   E   D E    
Sbjct: 733 SFSSLIEVNLSNCRRLRELTFLMFAP---NLKRLHVVSSNQLEDII-NKEKAHDGEKSGI 792

Query: 124 IIFNQLNYLELYNLPKLTNFHSGKCILKYVCLERLDIEGCPEVKKIPNETVS 176
           + F +LN L LYNL +L N +     L + CLE++++ GCP +KK+P ++ S
Sbjct: 793 VPFPKLNELHLYNLRELKNIYWSP--LPFPCLEKINVMGCPNLKKLPLDSKS 838

[Close]

BLAST of CsGy5G012900 vs. TAIR10
Match: AT1G63360.1 (Disease resistance protein (CC-NBS-LRR class) family)

HSP 1 Score: 49.7 bits (117), Expect = 2.4e-06
Identity = 35/112 (31.25%), Postives = 59/112 (52.68%), Query Frame = 0


Query: 65  FSNLTYVGVTDCNGLVNLFSCLVAKSLVNLKRLSISKCTKMRYIVAAPEGDADEENEEEI 124
           F +L  V + +C GL  L   + A     ++ LS+     +  I+   E  A E  E  I
Sbjct: 738 FLSLVDVNIFNCEGLRELTFLIFAP---KIRSLSVWHAKDLEDII--NEEKACEGEESGI 797

Query: 125 I-FNQLNYLELYNLPKLTNFHSGKCILKYVCLERLDIEGCPEVKKIPNETVS 176
           + F +LN+L L++LPKL   +     L ++CLE ++I  CP ++K+P ++ S
Sbjct: 798 LPFPELNFLTLHDLPKLKKIYWRP--LPFLCLEEINIRECPNLRKLPLDSTS 842

[Close]

BLAST of CsGy5G012900 vs. TAIR10
Match: AT5G63020.1 (Disease resistance protein (CC-NBS-LRR class) family)

HSP 1 Score: 48.1 bits (113), Expect = 6.9e-06
Identity = 37/130 (28.46%), Postives = 64/130 (49.23%), Query Frame = 0


Query: 54  RIKCLLPLSIT-----FSNLTYVGVTDCNGLVNLFSCLVAKSLVNLKRLSISKCTKMRYI 113
           R + +LPL I      F NL+ V +  C  L +L   + A +L  L+ +S S    ++ +
Sbjct: 722 RNETVLPLHIPTTTTFFPNLSQVSLEFCTRLRDLTWLIFAPNLTVLRVISAS---DLKEV 781

Query: 114 VAAPEGDADEENEEEIIFNQLNYLELYNLPKLTNFHSGKCILKYVCLERLDIEGCPEVKK 173
           +   +     E +  I F +L  L L N+  L + H G   L + CL+++ + GC E++K
Sbjct: 782 INKEKA----EQQNLIPFQELKELRLENVQMLKHIHRGP--LPFPCLQKILVNGCSELRK 841

Query: 174 IPNETVSTPK 179
           +P    S P+
Sbjct: 842 LPLNFTSVPR 842

[Close]

BLAST of CsGy5G012900 vs. TAIR10
Match: AT1G62630.1 (Disease resistance protein (CC-NBS-LRR class) family)

HSP 1 Score: 47.8 bits (112), Expect = 9.1e-06
Identity = 34/111 (30.63%), Postives = 58/111 (52.25%), Query Frame = 0


Query: 65  FSNLTYVGVTDCNGLVNLFSCLVAKSLVNLKRLSISKCTKMRYIVAAPEGDADEENEEEI 124
           F +L  V + +C GL  L   + A     L+ LS+     +  I+   E   + E+   +
Sbjct: 740 FLSLVDVTIYNCEGLRELTFLIFAP---KLRSLSVVDAKDLEDII-NEEKACEGEDSGIV 799

Query: 125 IFNQLNYLELYNLPKLTNFHSGKCILKYVCLERLDIEGCPEVKKIPNETVS 176
            F +L YL L +LPKL N +  +  L ++CLE++ I  CP ++K+P ++ S
Sbjct: 800 PFPELKYLNLDDLPKLKNIY--RRPLPFLCLEKITIGECPNLRKLPLDSRS 844

[Close]

BLAST of CsGy5G012900 vs. TAIR10
Match: AT5G47260.1 (ATP binding;GTP binding;nucleotide binding;nucleoside-triphosphatases)

HSP 1 Score: 47.0 bits (110), Expect = 1.5e-05
Identity = 35/112 (31.25%), Postives = 55/112 (49.11%), Query Frame = 0


Query: 65  FSNLTYVGVTDCNGLVNLFSCLVAKSLVNLKRLSISKCTKMRYIVAAPEGDADEENEEEI 124
           F N+  + +  C  L +L   L+A     L  LS+S+C +M  +++  +  A   N  E 
Sbjct: 720 FQNIRTMTIHRCEYLRDLTWLLLAPC---LGELSVSECPQMEEVISKDKAMAKLGNTSEQ 779

Query: 125 IFNQLNYLELYNLPKLTNFHSGKCILKYVCLERLDIEGCPEVKKIPNETVST 177
            F  L  L L  LPKL + +     L +  LE L I  CPE++++P  + ST
Sbjct: 780 PFQNLTKLVLDGLPKLESIYWTP--LPFPVLEYLVIRRCPELRRLPFNSEST 826

[Close]

BLAST of CsGy5G012900 vs. Swiss-Prot
Match: sp|Q9C8T9|DRL19_ARATH (Putative disease resistance protein At1g63350 OS=Arabidopsis thaliana OX=3702 GN=At1g63350 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.6e-07
Identity = 38/112 (33.93%), Postives = 61/112 (54.46%), Query Frame = 0


Query: 64  TFSNLTYVGVTDCNGLVNLFSCLVAKSLVNLKRLSISKCTKMRYIVAAPEGDADEENEEE 123
           +FS+L  V +++C  L  L   + A    NLKRL +    ++  I+   E   D E    
Sbjct: 733 SFSSLIEVNLSNCRRLRELTFLMFAP---NLKRLHVVSSNQLEDII-NKEKAHDGEKSGI 792

Query: 124 IIFNQLNYLELYNLPKLTNFHSGKCILKYVCLERLDIEGCPEVKKIPNETVS 176
           + F +LN L LYNL +L N +     L + CLE++++ GCP +KK+P ++ S
Sbjct: 793 VPFPKLNELHLYNLRELKNIYWSP--LPFPCLEKINVMGCPNLKKLPLDSKS 838

[Close]

BLAST of CsGy5G012900 vs. Swiss-Prot
Match: sp|Q9SH22|DRL20_ARATH (Probable disease resistance protein At1g63360 OS=Arabidopsis thaliana OX=3702 GN=At1g63360 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 4.3e-05
Identity = 35/112 (31.25%), Postives = 59/112 (52.68%), Query Frame = 0


Query: 65  FSNLTYVGVTDCNGLVNLFSCLVAKSLVNLKRLSISKCTKMRYIVAAPEGDADEENEEEI 124
           F +L  V + +C GL  L   + A     ++ LS+     +  I+   E  A E  E  I
Sbjct: 738 FLSLVDVNIFNCEGLRELTFLIFAP---KIRSLSVWHAKDLEDII--NEEKACEGEESGI 797

Query: 125 I-FNQLNYLELYNLPKLTNFHSGKCILKYVCLERLDIEGCPEVKKIPNETVS 176
           + F +LN+L L++LPKL   +     L ++CLE ++I  CP ++K+P ++ S
Sbjct: 798 LPFPELNFLTLHDLPKLKKIYWRP--LPFLCLEEINIRECPNLRKLPLDSTS 842

[Close]

BLAST of CsGy5G012900 vs. Swiss-Prot
Match: sp|Q8RXS5|DRL40_ARATH (Probable disease resistance protein At5g63020 OS=Arabidopsis thaliana OX=3702 GN=At5g63020 PE=2 SV=2)

HSP 1 Score: 48.1 bits (113), Expect = 1.2e-04
Identity = 37/130 (28.46%), Postives = 64/130 (49.23%), Query Frame = 0


Query: 54  RIKCLLPLSIT-----FSNLTYVGVTDCNGLVNLFSCLVAKSLVNLKRLSISKCTKMRYI 113
           R + +LPL I      F NL+ V +  C  L +L   + A +L  L+ +S S    ++ +
Sbjct: 722 RNETVLPLHIPTTTTFFPNLSQVSLEFCTRLRDLTWLIFAPNLTVLRVISAS---DLKEV 781

Query: 114 VAAPEGDADEENEEEIIFNQLNYLELYNLPKLTNFHSGKCILKYVCLERLDIEGCPEVKK 173
           +   +     E +  I F +L  L L N+  L + H G   L + CL+++ + GC E++K
Sbjct: 782 INKEKA----EQQNLIPFQELKELRLENVQMLKHIHRGP--LPFPCLQKILVNGCSELRK 841

Query: 174 IPNETVSTPK 179
           +P    S P+
Sbjct: 842 LPLNFTSVPR 842

[Close]

BLAST of CsGy5G012900 vs. Swiss-Prot
Match: sp|Q9SI85|DRL14_ARATH (Probable disease resistance protein At1g62630 OS=Arabidopsis thaliana OX=3702 GN=At1g62630 PE=3 SV=2)

HSP 1 Score: 47.8 bits (112), Expect = 1.6e-04
Identity = 34/111 (30.63%), Postives = 58/111 (52.25%), Query Frame = 0


Query: 65  FSNLTYVGVTDCNGLVNLFSCLVAKSLVNLKRLSISKCTKMRYIVAAPEGDADEENEEEI 124
           F +L  V + +C GL  L   + A     L+ LS+     +  I+   E   + E+   +
Sbjct: 740 FLSLVDVTIYNCEGLRELTFLIFAP---KLRSLSVVDAKDLEDII-NEEKACEGEDSGIV 799

Query: 125 IFNQLNYLELYNLPKLTNFHSGKCILKYVCLERLDIEGCPEVKKIPNETVS 176
            F +L YL L +LPKL N +  +  L ++CLE++ I  CP ++K+P ++ S
Sbjct: 800 PFPELKYLNLDDLPKLKNIY--RRPLPFLCLEKITIGECPNLRKLPLDSRS 844

[Close]

BLAST of CsGy5G012900 vs. Swiss-Prot
Match: sp|Q9LVT3|DRL38_ARATH (Probable disease resistance protein At5g47260 OS=Arabidopsis thaliana OX=3702 GN=At5g47260 PE=3 SV=2)

HSP 1 Score: 47.0 bits (110), Expect = 2.8e-04
Identity = 35/112 (31.25%), Postives = 55/112 (49.11%), Query Frame = 0


Query: 65  FSNLTYVGVTDCNGLVNLFSCLVAKSLVNLKRLSISKCTKMRYIVAAPEGDADEENEEEI 124
           F N+  + +  C  L +L   L+A     L  LS+S+C +M  +++  +  A   N  E 
Sbjct: 720 FQNIRTMTIHRCEYLRDLTWLLLAPC---LGELSVSECPQMEEVISKDKAMAKLGNTSEQ 779

Query: 125 IFNQLNYLELYNLPKLTNFHSGKCILKYVCLERLDIEGCPEVKKIPNETVST 177
            F  L  L L  LPKL + +     L +  LE L I  CPE++++P  + ST
Sbjct: 780 PFQNLTKLVLDGLPKLESIYWTP--LPFPVLEYLVIRRCPELRRLPFNSEST 826

[Close]

BLAST of CsGy5G012900 vs. TrEMBL
Match: tr|A0A0A0LW89|A0A0A0LW89_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G201770 PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 7.1e-106
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 1   IVLFPRLRFLATSSGRSCSLGWKSFPTLEDVHLRGFKDDGTVSLPKELTELLYRIKCLLP 60
           IVLFPRLRFLATSSGRSCSLGWKSFPTLEDVHLRGFKDDGTVSLPKELTELLYRIKCLLP
Sbjct: 113 IVLFPRLRFLATSSGRSCSLGWKSFPTLEDVHLRGFKDDGTVSLPKELTELLYRIKCLLP 172

Query: 61  LSITFSNLTYVGVTDCNGLVNLFSCLVAKSLVNLKRLSISKCTKMRYIVAAPEGDADEEN 120
           LSITFSNLTYVGVTDCNGLVNLFSCLVAKSLVNLKRLSISKCTKMRYIVAAPEGDADEEN
Sbjct: 173 LSITFSNLTYVGVTDCNGLVNLFSCLVAKSLVNLKRLSISKCTKMRYIVAAPEGDADEEN 232

Query: 121 EEEIIFNQLNYLELYNLPKLTNFHSGKCILKYVCLERLDIEGCPEVKKIPNETVSTPKLP 180
           EEEIIFNQLNYLELYNLPKLTNFHSGKCILKYVCLERLDIEGCPEVKKIPNETVSTPKLP
Sbjct: 233 EEEIIFNQLNYLELYNLPKLTNFHSGKCILKYVCLERLDIEGCPEVKKIPNETVSTPKLP 292

Query: 181 FVTTSSNYRRRRL 194
           FVTTSSNYRRRRL
Sbjct: 293 FVTTSSNYRRRRL 305

[Close]

BLAST of CsGy5G012900 vs. TrEMBL
Match: tr|A0A0A0LTN4|A0A0A0LTN4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G433370 PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 8.6e-19
Identity = 54/121 (44.63%), Postives = 75/121 (61.98%), Query Frame = 0


Query: 59   LPLSITFSNLTYVGVTDCNGLVNLFSCLVAKSLVNLKRLSISKCTKMRYIVAAPEGDADE 118
            LP SI F NL  + +  CNG++NLFS  V K LVNL  + +S C  MR +V   +     
Sbjct: 1028 LPSSIAFLNLKELHIKKCNGMINLFSSTVTKKLVNLSSIKVSYCKGMRCMVEVDQA---- 1087

Query: 119  ENEEEIIFNQLNYLELYNLPKLTNFHSGKCILKYVCLERLDIEGCPEVKKIPNETVSTPK 178
            EN+E I F +L+ LEL  LP+L +F+SGKC+L++ CLE L I+ CPE+K      +  P+
Sbjct: 1088 ENDEIITFKKLSTLELDYLPRLDSFYSGKCMLEFPCLESLVIKRCPEMKTFSYGVIIAPR 1144

Query: 179  L 180
            L
Sbjct: 1148 L 1144

[Close]

BLAST of CsGy5G012900 vs. TrEMBL
Match: tr|A0A2I4E7Z1|A0A2I4E7Z1_9ROSI (disease resistance protein At4g27190-like OS=Juglans regia OX=51240 GN=LOC108987102 PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 2.1e-17
Identity = 64/181 (35.36%), Postives = 100/181 (55.25%), Query Frame = 0


Query: 1    IVLFPRLRFLATSSGRSCSLGWKSFPTLEDVHLRGFKDDGTVSLPKELTELLY--RIKCL 60
            ++ FPRLR L   S    +  WK     ED           +    E  E+L+  +++ L
Sbjct: 1060 VMTFPRLRQLVLESLPMLAHLWK-----EDT------QPCPLFYNLEFLEVLHCNKLRIL 1119

Query: 61   LPLSITFSNLTYVGVTDCNGLVNLFSCLVAKSLVNLKRLSISKCTKMRYIVAAPEGDADE 120
            +P +++  NLT + V++C+GL+NL +   A++L+ L +++ISKC K+  IVA  +G+A+ 
Sbjct: 1120 VPSTVSLRNLTDLSVSNCHGLINLVTSSTARTLLLLNKMTISKCKKITKIVAMEDGEAN- 1179

Query: 121  ENEEEIIFNQLNYLELYNLPKLTNFHSGKCILKYVCLERLDIEGCPEVKKIPNETVSTPK 180
                 I FN+L YLEL  LP LTNF SG     +  LE++ +  CPE+K      +S PK
Sbjct: 1180 ---VAITFNKLTYLELDGLPNLTNFCSGAYSFGFPSLEKVIVTCCPEMKTFCQGILSAPK 1225

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BLAST of CsGy5G012900 vs. TrEMBL
Match: tr|A0A1R3GWJ4|A0A1R3GWJ4_COCAP (Ribosomal protein S7e OS=Corchorus capsularis OX=210143 GN=CCACVL1_22869 PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 2.1e-17
Identity = 56/134 (41.79%), Postives = 85/134 (63.43%), Query Frame = 0


Query: 54   RIKCLLPLSITFSNLTYVGVTDCNGLVNLFSCLVAKSLVNLKRLSISKCTKMRYIVAAPE 113
            ++K L+P S++F NL+ + V+ C+GLVNL SC  AKSLV L RLS++ C  +  I+A   
Sbjct: 3035 KLKTLVPSSVSFGNLSTLEVSRCHGLVNLISCSTAKSLVQLTRLSLTDCEMIEEIIAC-- 3094

Query: 114  GDADEENEEEIIFNQLNYLELYNLPKLTNFHSGKCILKYVCLERLDIEGCPEVKKIPNET 173
             D DE  +  I+F QL +L+L  LP L +F SG  IL++  LE++ ++ CP++K      
Sbjct: 3095 -DCDEV-KGGIVFGQLKFLQLSCLPSLASFCSGDYILEFPTLEKMIVKECPKMKMFCQGD 3154

Query: 174  VSTPKLPFVTTSSN 188
            +STP+L  V  S +
Sbjct: 3155 LSTPQLSKVLFSDD 3164

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BLAST of CsGy5G012900 vs. TrEMBL
Match: tr|A0A0A0LKS9|A0A0A0LKS9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G096940 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.8e-17
Identity = 48/126 (38.10%), Postives = 78/126 (61.90%), Query Frame = 0


Query: 54  RIKCLLPLSITFSNLTYVGVTDCNGLVNLFSCLVAKSLVNLKRLSISKCTKMRYIVAAPE 113
           ++   +P S++F NL  + V +C+ L+ L +  VA+++  L++L I +C +M  ++A  E
Sbjct: 286 KLNMFVPSSMSFRNLVDLKVMECHKLIYLINPSVARTMGQLRQLEIRRCKRMTSVIAKEE 345

Query: 114 GDADEENEEEIIFNQLNYLELYNLPKLTNFHSGKCILKYVCLERLDIEGCPEVKKIPNET 173
            D       EI+FN+L YL + +LPKL NFHSGKC +++  L R+ ++ CPE+K      
Sbjct: 346 ND-------EILFNKLIYLVVVDLPKLLNFHSGKCTIRFPVLRRISVQNCPEMKDFCTGI 404

Query: 174 VSTPKL 180
           VSTP L
Sbjct: 406 VSTPHL 404

The following BLAST results are available for this feature:

BLAST of CsGy5G012900 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN65087.1	1.1e-105	100.00	hypothetical protein Csa_1G201770 [Cucumis sativus]	[more]
XP_022143564.1	1.6e-29	46.55	probable disease resistance protein At4g27220 [Momordica charantia]	[more]
XP_021674433.1	4.3e-22	44.78	LOW QUALITY PROTEIN: uncharacterized protein LOC110660414 [Hevea brasiliensis]	[more]
XP_021674422.1	3.7e-21	44.03	uncharacterized protein LOC110660410 isoform X2 [Hevea brasiliensis]	[more]
XP_011650060.1	1.4e-20	41.03	PREDICTED: uncharacterized protein LOC105434705 [Cucumis sativus]	[more]

BLAST of CsGy5G012900 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G63350.1	8.7e-09	33.93	Disease resistance protein (CC-NBS-LRR class) family	[more]
AT1G63360.1	2.4e-06	31.25	Disease resistance protein (CC-NBS-LRR class) family	[more]
AT5G63020.1	6.9e-06	28.46	Disease resistance protein (CC-NBS-LRR class) family	[more]
AT1G62630.1	9.1e-06	30.63	Disease resistance protein (CC-NBS-LRR class) family	[more]
AT5G47260.1	1.5e-05	31.25	ATP binding;GTP binding;nucleotide binding;nucleoside-triphosphatases	[more]

BLAST of CsGy5G012900 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9C8T9\|DRL19_ARATH	1.6e-07	33.93	Putative disease resistance protein At1g63350 OS=Arabidopsis thaliana OX=3702 GN...	[more]
sp\|Q9SH22\|DRL20_ARATH	4.3e-05	31.25	Probable disease resistance protein At1g63360 OS=Arabidopsis thaliana OX=3702 GN...	[more]
sp\|Q8RXS5\|DRL40_ARATH	1.2e-04	28.46	Probable disease resistance protein At5g63020 OS=Arabidopsis thaliana OX=3702 GN...	[more]
sp\|Q9SI85\|DRL14_ARATH	1.6e-04	30.63	Probable disease resistance protein At1g62630 OS=Arabidopsis thaliana OX=3702 GN...	[more]
sp\|Q9LVT3\|DRL38_ARATH	2.8e-04	31.25	Probable disease resistance protein At5g47260 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of CsGy5G012900 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LW89\|A0A0A0LW89_CUCSA	7.1e-106	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G201770 PE=4 SV=1	[more]
tr\|A0A0A0LTN4\|A0A0A0LTN4_CUCSA	8.6e-19	44.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G433370 PE=3 SV=1	[more]
tr\|A0A2I4E7Z1\|A0A2I4E7Z1_9ROSI	2.1e-17	35.36	disease resistance protein At4g27190-like OS=Juglans regia OX=51240 GN=LOC108987...	[more]
tr\|A0A1R3GWJ4\|A0A1R3GWJ4_COCAP	2.1e-17	41.79	Ribosomal protein S7e OS=Corchorus capsularis OX=210143 GN=CCACVL1_22869 PE=3 SV...	[more]
tr\|A0A0A0LKS9\|A0A0A0LKS9_CUCSA	2.8e-17	38.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G096940 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR032675	LRR_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G012900.1	CsGy5G012900.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	G3DSA:3.80.10.10		coord: 1..191 e-value: 6.7E-14 score: 53.1
None	No IPR available	PANTHER	PTHR33463	FAMILY NOT NAMED	coord: 55..185
None	No IPR available	PANTHER	PTHR33463:SF6	SUBFAMILY NOT NAMED	coord: 55..185
None	No IPR available	SUPERFAMILY	SSF52047	RNI-like	coord: 22..187

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy5G012900	Csa1G201770	Cucumber (Chinese Long) v2	cgybcuB198
CsGy5G012900	CSPI01G16320	Wild cucumber (PI 183967)	cgybcpiB202
CsGy5G012900	CsaV3_1G020780	Cucumber (Chinese Long) v3	cgybcucB202

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy5G012900	Cucurbita maxima (Rimu)	cgybcmaB584
CsGy5G012900	Cucurbita maxima (Rimu)	cgybcmaB588
CsGy5G012900	Cucurbita moschata (Rifu)	cgybcmoB556
CsGy5G012900	Cucurbita moschata (Rifu)	cgybcmoB559
CsGy5G012900	Cucurbita pepo (Zucchini)	cgybcpeB622
CsGy5G012900	Cucurbita pepo (Zucchini)	cgybcpeB680
CsGy5G012900	Bottle gourd (USVL1VR-Ls)	cgyblsiB348
CsGy5G012900	Melon (DHL92) v3.5.1	cgybmeB337
CsGy5G012900	Melon (DHL92) v3.6.1	cgybmedB338
CsGy5G012900	Watermelon (Charleston Gray)	cgybwcgB366
CsGy5G012900	Watermelon (97103) v1	cgybwmB413
CsGy5G012900	Silver-seed gourd	carcgybB0042
CsGy5G012900	Silver-seed gourd	carcgybB0141
CsGy5G012900	Cucumber (Chinese Long) v3	cgybcucB232
CsGy5G012900	Watermelon (97103) v2	cgybwmbB373
CsGy5G012900	Wax gourd	cgybwgoB501