CsGy5G011600 (gene) Cucumber (Gy14) v2

Overview
NameCsGy5G011600
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptionactivator of 90 kDa heat shock protein ATPase homolog 1
LocationChr5 : 12695201 .. 12697649 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGCGTGGGTCTTCTAGCCAAAAGGCTTAAGCGTGAACTTGTAACTGCACTGCAATGCTTTGTGGAGAATAAAACAGTTGGTATGACATTATTTGTCTTTGAAGGTCGCATTTTCGTACTTCTAATTTACGGTATTAATATTCAACTATTTTGATTATGAAAGTTAGCGAGACAAAACCTTAGAAGTGAAGACCATATTCTTGGAAGATTTGACAAGTGTTGAGAGAGGAAGAAGGGGTTCGATTGGATGAAATGTGAAGTGTAGGGTAAATTTTGATACACCTTGACAAGTTTAAAGTTAAAATTGATCTTTTTCCTTTTTTTTTTTTTTTTTTTGTCATTCTTTTGCAAACATGCTTCGTTAACTTCCCAAATTTTGAAAACTAAAAAAAAGTAACATGTGTGACTTTCTTAGTTTGTATTACTGATTTACTCTTCTTTTCTTCATTTATTTCCGTTTCGTTTACGATTTAGCATGACATTGTTGAACTGTGTTGGAAAGAATTATTATCTAAACTAGTGGAAACTGGCATGACTTCTTCTTGGTTACGGTCATCATTTTTATTCTATAACAGACTAGTTATATGGTCTGCATATTGCATATAATTTTGTAAAGCTTGGAGCCTTCATTATTCTTTTCCTTCAACAGGTAGTTTAATTAAAATGGATCAAGCTTATCCGGTCCAAATGTTTCAATTGTAGTTTGGCCTTATTATCGTTAGCAGACATTTCTGTTGTCAATGCTTGAGCTTCTAGTTCTAAGTCAAAGCCGCATTGGTAGGCTCAAACTTAGTGTTTTAACATGCCACCCTAATCTATTGGAAACTATATTTGTTATATATATATATATTCACAATGCTTCAAGTCTGGCGTTGAGCCAACATCGACTCAACTTTTCTGGTGCACTTGAATGAATAGCTTAAAAGAGATAGGATTGGAGAATGACTAGGAGGAGTTTTCCTAACCTAGAACTGTTGTCTGCAACTTCTCCCTCTTATTTTTGGTTAATAATTTGTTCTTAAATTGGGTTTTCTATTTGCACTATTATTAACCGTATATGGAAGCTTTCTTGCTTAGCGCTGGAACAAAAGGTACAAGTTAGAGTGGTAACATCTTTTGAATTTTATTTTTGTAGGTTTCTTAAATTAAATATTTCTCTAATATTAAAAAATAAATGAAGTTTTTTGCTCTGCATCTTCTCGTTTATTTCTAAAGGAAAAAGATATAGCTTGTCGAACTCGAGGATAATGATCTGTCAGCCTCTCGGTGGTGCTTAGGGTGCACACATTGACATTGATATTCAGGTATCCCTATAAATTCTCTTGGTTAGTCAGTAAGATATCGGTCAGATTCATTATGAATAGATTGATCAATAGACTAGAAAGGAATTCAATATGAATGGATTCAAAATTTTGTGTCATATAAAGTTCATATACATGTGATGAGAATTTTGGTTTCTGTTTCTGTTTGGTTAATCACTCCCCCCAACACACTTTTTTTAAAATTATTTTTGTAGTCTGAATTCTGAATCATCTAGACTGCAGGTGGATCTGTAGGTCATAAGAGATATAGCCACCGTTTCTCTGTTATGCTAACTATTAAGTTCCAAAACAATATGATTGTCCCTCCAATTTACAGCATTGTAAATTGTTGTTCCTTGTTCATACTACACCTAGGAATCAACAACACCAAAACTTTGTTATAAAATATATCTTTTCCTTATCAAAAATAGAATAGTTTAGAATCATACGCTTTTCGTAATCATGTAATGCTTCTACAAATTTAACTTTTAAAGTATGACTTTCTAATTGAATAGTCAAGTTGTTCCTGAGATTTTGATGTTATCCTCCATGTTCCTCTTTAAAGAACAACGACTGATTAGTCGTATGATCGATCAAGTTAAATTGATTTTAAAAATATTGCACAGGTGAAATTAACGTTCGATGAGCTCGAGTCTAGGGTCAACATTGTGAATTTGGTAAATTTCGACGTACCTGACAAGGACAGGTTGGTGTCTCTAATCATTGTGCTAATGAATGATATTTGTTTACCATTGTGAAGTTGGTGCTTTCTTATCATTGTTCATCATTTGGTTTGAATTAGATATGAGAATGCAACTGTGGTGGAGAATACGAAGATGGGCTGGCTGGATATTATATTCCACAAGATGAGAGTAGTTTTTGCCTTTGGAATATGATGGGGTACTTATTGTCTTACAATAGAGTCTAGTCCTTTGGCTTCTTAAGATGCTTCTCATTTGCATATCATCTTCACAAATGATAATGATTTGAAATACTTCAATTTACATTGTCAGATGATGTAGTTCTCCTAGTTTGTATTGCCTTCCATCCATATTTCAGAATCAAAATTTGTTGTTGGATTCTCCCCTTTTCACATATAATGAGATACAATTGTCACATTTTTTATCTATAAGAATACCTAGACGTGCA

mRNA sequence

AGCGTGGGTCTTCTAGCCAAAAGGCTTAAGCGTGAACTTGTAACTGCACTGCAATGCTTTGTGGAGAATAAAACAGTGAAATTAACGTTCGATGAGCTCGAGTCTAGGGTCAACATTGTGAATTTGGTAAATTTCGACGTACCTGACAAGGACAGATATGAGAATGCAACTGTGGTGGAGAATACGAAGATGGGCTGGCTGGATATTATATTCCACAAGATGAGAGTAGTTTTTGCCTTTGGAATATGATGGGGTACTTATTGTCTTACAATAGAGTCTAGTCCTTTGGCTTCTTAAGATGCTTCTCATTTGCATATCATCTTCACAAATGATAATGATTTGAAATACTTCAATTTACATTGTCAGATGATGTAGTTCTCCTAGTTTGTATTGCCTTCCATCCATATTTCAGAATCAAAATTTGTTGTTGGATTCTCCCCTTTTCACATATAATGAGATACAATTGTCACATTTTTTATCTATAAGAATACCTAGACGTGCA

Coding sequence (CDS)

AGCGTGGGTCTTCTAGCCAAAAGGCTTAAGCGTGAACTTGTAACTGCACTGCAATGCTTTGTGGAGAATAAAACAGTGAAATTAACGTTCGATGAGCTCGAGTCTAGGGTCAACATTGTGAATTTGGTAAATTTCGACGTACCTGACAAGGACAGATATGAGAATGCAACTGTGGTGGAGAATACGAAGATGGGCTGGCTGGATATTATATTCCACAAGATGAGAGTAGTTTTTGCCTTTGGAATATGA

Protein sequence

SVGLLAKRLKRELVTALQCFVENKTVKLTFDELESRVNIVNLVNFDVPDKDRYENATVVENTKMGWLDIIFHKMRVVFAFGI
Homology
[Close]
BLAST of CsGy5G011600 vs. NCBI nr
Match: XP_022983012.1 (activator of 90 kDa heat shock protein ATPase homolog 1 [Cucurbita maxima])

HSP 1 Score: 87.0 bits (214), Expect = 3.2e-14
Identity = 41/60 (68.33%), Postives = 49/60 (81.67%), Query Frame = 0 

Query: 23  NKTVKLTFDELESRVNIVNLVNFDVPDKDRYENATVVENTKMGWLDIIFHKMRVVFAFGI 82
           + TVKLTFDELE  V IV LV+ DVP++DRY NATVVENT+ GW D+IFHK+R VF FG+
Sbjct: 292 HSTVKLTFDELEPGVTIVKLVHSDVPEEDRYGNATVVENTERGWRDLIFHKIRAVFGFGM 351

[Close]
BLAST of CsGy5G011600 vs. NCBI nr
Match: XP_004136562.1 (PREDICTED: activator of 90 kDa heat shock protein ATPase homolog 1 [Cucumis sativus] >KGN59286.1 hypothetical protein Csa_3G800690 [Cucumis sativus])

HSP 1 Score: 85.5 bits (210), Expect = 9.2e-14
Identity = 41/60 (68.33%), Postives = 48/60 (80.00%), Query Frame = 0 

Query: 23  NKTVKLTFDELESRVNIVNLVNFDVPDKDRYENATVVENTKMGWLDIIFHKMRVVFAFGI 82
           + TVKLTFDE E  V IV LV+ DVP++DRY NATVVENT+ GW D+IFHK+R VF FGI
Sbjct: 293 HSTVKLTFDEPEPGVTIVKLVHTDVPEEDRYGNATVVENTERGWRDLIFHKIRAVFGFGI 352

[Close]
BLAST of CsGy5G011600 vs. NCBI nr
Match: XP_008443031.1 (PREDICTED: activator of 90 kDa heat shock protein ATPase homolog 1 [Cucumis melo])

HSP 1 Score: 85.5 bits (210), Expect = 9.2e-14
Identity = 41/60 (68.33%), Postives = 48/60 (80.00%), Query Frame = 0 

Query: 23  NKTVKLTFDELESRVNIVNLVNFDVPDKDRYENATVVENTKMGWLDIIFHKMRVVFAFGI 82
           + TVKLTFDE E  V IV LV+ DVP++DRY NATVVENT+ GW D+IFHK+R VF FGI
Sbjct: 293 HSTVKLTFDEPEPGVTIVKLVHSDVPEEDRYGNATVVENTERGWRDLIFHKIRAVFGFGI 352

[Close]
BLAST of CsGy5G011600 vs. NCBI nr
Match: XP_022151410.1 (activator of 90 kDa heat shock protein ATPase homolog [Momordica charantia])

HSP 1 Score: 84.7 bits (208), Expect = 1.6e-13
Identity = 39/60 (65.00%), Postives = 48/60 (80.00%), Query Frame = 0 

Query: 23  NKTVKLTFDELESRVNIVNLVNFDVPDKDRYENATVVENTKMGWLDIIFHKMRVVFAFGI 82
           + TVKLTFDE E  V +V L++ DVP++DRY NATVVENT+ GW D+IFHK+R VF FGI
Sbjct: 293 HSTVKLTFDEPEPGVTVVKLIHSDVPEEDRYGNATVVENTERGWRDLIFHKIRAVFGFGI 352

[Close]
BLAST of CsGy5G011600 vs. NCBI nr
Match: PIM97799.1 (hypothetical protein CDL12_29728 [Handroanthus impetiginosus])

HSP 1 Score: 84.3 bits (207), Expect = 2.0e-13
Identity = 39/58 (67.24%), Postives = 47/58 (81.03%), Query Frame = 0 

Query: 25  TVKLTFDELESRVNIVNLVNFDVPDKDRYENATVVENTKMGWLDIIFHKMRVVFAFGI 83
           TV+LTFDE ES V +V L + DVP++DRY NATVVENT+ GW D+IFHK+R VF FGI
Sbjct: 299 TVRLTFDEPESGVTVVKLTHVDVPEEDRYGNATVVENTERGWRDLIFHKIRAVFGFGI 356

[Close]
BLAST of CsGy5G011600 vs. TAIR10
Match: AT3G12050.1 (Aha1 domain-containing protein)

HSP 1 Score: 79.7 bits (195), Expect = 9.1e-16
Identity = 36/60 (60.00%), Postives = 47/60 (78.33%), Query Frame = 0 

Query: 23  NKTVKLTFDELESRVNIVNLVNFDVPDKDRYENATVVENTKMGWLDIIFHKMRVVFAFGI 82
           + TVK+ F+E +  V IVNL + DVP++DRY NATVVENT+ GW D+IFH++R VF FGI
Sbjct: 301 DSTVKIVFEEPQPGVTIVNLTHTDVPEEDRYGNATVVENTERGWRDLIFHRIRAVFGFGI 360

[Close]
BLAST of CsGy5G011600 vs. TrEMBL
Match: tr|A0A1S3B732|A0A1S3B732_CUCME (activator of 90 kDa heat shock protein ATPase homolog 1 OS=Cucumis melo OX=3656 GN=LOC103486749 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 6.1e-14
Identity = 41/60 (68.33%), Postives = 48/60 (80.00%), Query Frame = 0 

Query: 23  NKTVKLTFDELESRVNIVNLVNFDVPDKDRYENATVVENTKMGWLDIIFHKMRVVFAFGI 82
           + TVKLTFDE E  V IV LV+ DVP++DRY NATVVENT+ GW D+IFHK+R VF FGI
Sbjct: 293 HSTVKLTFDEPEPGVTIVKLVHSDVPEEDRYGNATVVENTERGWRDLIFHKIRAVFGFGI 352

[Close]
BLAST of CsGy5G011600 vs. TrEMBL
Match: tr|A0A0A0LGX2|A0A0A0LGX2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G800690 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 6.1e-14
Identity = 41/60 (68.33%), Postives = 48/60 (80.00%), Query Frame = 0 

Query: 23  NKTVKLTFDELESRVNIVNLVNFDVPDKDRYENATVVENTKMGWLDIIFHKMRVVFAFGI 82
           + TVKLTFDE E  V IV LV+ DVP++DRY NATVVENT+ GW D+IFHK+R VF FGI
Sbjct: 293 HSTVKLTFDEPEPGVTIVKLVHTDVPEEDRYGNATVVENTERGWRDLIFHKIRAVFGFGI 352

[Close]
BLAST of CsGy5G011600 vs. TrEMBL
Match: tr|A0A2G9FYR2|A0A2G9FYR2_9LAMI (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_29728 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.4e-13
Identity = 39/58 (67.24%), Postives = 47/58 (81.03%), Query Frame = 0 

Query: 25  TVKLTFDELESRVNIVNLVNFDVPDKDRYENATVVENTKMGWLDIIFHKMRVVFAFGI 83
           TV+LTFDE ES V +V L + DVP++DRY NATVVENT+ GW D+IFHK+R VF FGI
Sbjct: 299 TVRLTFDEPESGVTVVKLTHVDVPEEDRYGNATVVENTERGWRDLIFHKIRAVFGFGI 356

[Close]
BLAST of CsGy5G011600 vs. TrEMBL
Match: tr|V4LEC6|V4LEC6_EUTSA (Uncharacterized protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10021006mg PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.8e-13
Identity = 39/60 (65.00%), Postives = 48/60 (80.00%), Query Frame = 0 

Query: 23  NKTVKLTFDELESRVNIVNLVNFDVPDKDRYENATVVENTKMGWLDIIFHKMRVVFAFGI 82
           + TV+LTFDE E  V IVNL + DVP++DRY NATVVENT+ GW D+IFH++R VF FGI
Sbjct: 300 DSTVRLTFDEPEPGVTIVNLTHTDVPEEDRYGNATVVENTERGWRDLIFHRIRAVFGFGI 359

[Close]
BLAST of CsGy5G011600 vs. TrEMBL
Match: tr|A0A2P2M7A0|A0A2P2M7A0_RHIMU (Uncharacterized protein MANES_09G037400 OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 6.7e-13
Identity = 37/58 (63.79%), Postives = 46/58 (79.31%), Query Frame = 0 

Query: 25  TVKLTFDELESRVNIVNLVNFDVPDKDRYENATVVENTKMGWLDIIFHKMRVVFAFGI 83
           TV+LTFDE E  + +V L + D+PD+DRY NATVVENT+ GW D+IFHK+R VF FGI
Sbjct: 296 TVRLTFDEPEPGMTVVKLTHSDIPDEDRYGNATVVENTERGWRDLIFHKIRAVFGFGI 353

The following BLAST results are available for this feature:
BLAST of CsGy5G011600 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022983012.13.2e-1468.33activator of 90 kDa heat shock protein ATPase homolog 1 [Cucurbita maxima][more]
XP_004136562.19.2e-1468.33PREDICTED: activator of 90 kDa heat shock protein ATPase homolog 1 [Cucumis sati... [more]
XP_008443031.19.2e-1468.33PREDICTED: activator of 90 kDa heat shock protein ATPase homolog 1 [Cucumis melo... [more]
XP_022151410.11.6e-1365.00activator of 90 kDa heat shock protein ATPase homolog [Momordica charantia][more]
PIM97799.12.0e-1367.24hypothetical protein CDL12_29728 [Handroanthus impetiginosus][more]
BLAST of CsGy5G011600 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G12050.19.1e-1660.00Aha1 domain-containing protein[more]
BLAST of CsGy5G011600 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy5G011600 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3B732|A0A1S3B732_CUCME6.1e-1468.33activator of 90 kDa heat shock protein ATPase homolog 1 OS=Cucumis melo OX=3656 ... [more]
tr|A0A0A0LGX2|A0A0A0LGX2_CUCSA6.1e-1468.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G800690 PE=4 SV=1[more]
tr|A0A2G9FYR2|A0A2G9FYR2_9LAMI1.4e-1367.24Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_29728 P... [more]
tr|V4LEC6|V4LEC6_EUTSA1.8e-1365.00Uncharacterized protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10021006mg PE=... [more]
tr|A0A2P2M7A0|A0A2P2M7A0_RHIMU6.7e-1363.79Uncharacterized protein MANES_09G037400 OS=Rhizophora mucronata OX=61149 PE=4 SV... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032781 positive regulation of ATPase activity
biological_process GO:0006950 response to stress
cellular_component GO:0005575 cellular_component
molecular_function GO:0001671 ATPase activator activity
molecular_function GO:0051087 chaperone binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G011600.1CsGy5G011600.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR13009:SF16AHA1 DOMAIN-CONTAINING PROTEINcoord: 24..82
NoneNo IPR availablePANTHERPTHR13009HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1coord: 24..82

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy5G011600CSPI05G01410Wild cucumber (PI 183967)cgybcpiB227
CsGy5G011600CsaV3_5G015400Cucumber (Chinese Long) v3cgybcucB232
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy5G011600Cucurbita maxima (Rimu)cgybcmaB669
CsGy5G011600Cucurbita moschata (Rifu)cgybcmoB647
CsGy5G011600Cucumber (Chinese Long) v2cgybcuB225
CsGy5G011600Bottle gourd (USVL1VR-Ls)cgyblsiB339
CsGy5G011600Melon (DHL92) v3.5.1cgybmeB326
CsGy5G011600Melon (DHL92) v3.6.1cgybmedB323
CsGy5G011600Melon (DHL92) v3.6.1cgybmedB324
CsGy5G011600Watermelon (Charleston Gray)cgybwcgB373
CsGy5G011600Watermelon (97103) v2cgybwmbB348
CsGy5G011600Watermelon (97103) v2cgybwmbB380
CsGy5G011600Wax gourdcgybwgoB484