CsGy5G010710 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy5G010710
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Non-specific serine/threonine protein kinase
Location	Chr5 : 11165248 .. 11166232 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAGGTTATTTCTGGAAAATTATACGCAGGGCCTGAAGTAGACGTATGGAGCTGTGGGGTTATATTGTACGCTATTTTATGTGGTTCTCTTCCTTTCGATAATGAAAACATTCATATTCTTGTTCAGAAAATAAAGGTAAATCTTAATTTCCATCAACATAAAAACACAAAAAGGGTAAATCTTTAATTTATCAACATAAAATGTGTAGGATGCCATTCGATACACACATCTCAATTACTGTATTTGTTTTGCATTAATGTATACATAACATCCATCTCCTGGAATTCCTGACATCATCTTTTCACTTCTTTTACCCTTTTCTTTTTCATATATATTTACATTTTATTATCAAAATAAATACCATCAACTGTGAGTATATATATATATATATCAAGTACTTTTCTTGATTAAATCATAGTTGCTTTTTATTGCTATTTAGAAAGATATATAGTGGTGGGAATTGATCACGTACTCGCTAATTAACATATCATTAATACATCTTGATAGACTAAAAACTTCAATCAGTGATATAGATCTCTACTATTAAATAGTAACAGTTATAAATGAATAATATATGTGCATTATTTATGAGCTAATGACATACGTTTTTATTAAAATATATTGGTTAGAAGGAGTCAAGGTTTGAGTATTTCTTTGATGTTATTCATTTTTCGTAGAATGGAGTGTATAAGCTTCCAAGTTATTTATCAGCTGAGGCAAGTAACTTGATCTCAAGTATGCTTGTAGTTGATCCACTTAGAAGAATAAGCATAACACAAATTCGCCAACATCCATGGTTTCAATCTCATCTTCCTCGATATTTAGCTGTCAAACCACTTTCTACTATACGTCAACTTGAACAGGTTAGTTACCTTATTTTGCTTCTCTCTCTATATATACTTTCCGATATAAATACTGCTATTCGTGTTGATATTTGTTCAACAACTTTAAATATTGGTTTAATATATGTAGAATAATACATAA

mRNA sequence

ATAGGTTATTTCTGGAAAATTATACGCAGGGCCTGAAGTAGACGTATGGAGCTGTGGGGTTATATTGTACGCTATTTTATGTGGTTCTCTTCCTTTCGATAATGAAAACATTCATATTCTTGTTCAGAAAATAAAGAATGGAGTGTATAAGCTTCCAAGTTATTTATCAGCTGAGGCAAGTAACTTGATCTCAAGTATGCTTGTAGTTGATCCACTTAGAAGAATAAGCATAACACAAATTCGCCAACATCCATGGTTTCAATCTCATCTTCCTCGATATTTAGCTGTCAAACCACTTTCTACTATACGTCAACTTGAACAGAATAATACATAA

Coding sequence (CDS)

ATGCTTGTAGTTGATCCACTTAGAAGAATAAGCATAACACAAATTCGCCAACATCCATGGTTTCAATCTCATCTTCCTCGATATTTAGCTGTCAAACCACTTTCTACTATACGTCAACTTGAACAGAATAATACATAA

Protein sequence

MLVVDPLRRISITQIRQHPWFQSHLPRYLAVKPLSTIRQLEQNNT

Homology

[Close]

BLAST of CsGy5G010710 vs. NCBI nr
Match: XP_004149632.1 (PREDICTED: SNF1-related protein kinase catalytic subunit alpha KIN10-like [Cucumis sativus])

HSP 1 Score: 88.2 bits (217), Expect = 7.8e-15
Identity = 42/42 (100.00%), Postives = 42/42 (100.00%), Query Frame = 0


Query: 1   MLVVDPLRRISITQIRQHPWFQSHLPRYLAVKPLSTIRQLEQ 43
           MLVVDPLRRISITQIRQHPWFQSHLPRYLAVKPLSTIRQLEQ
Sbjct: 253 MLVVDPLRRISITQIRQHPWFQSHLPRYLAVKPLSTIRQLEQ 294

[Close]

BLAST of CsGy5G010710 vs. NCBI nr
Match: XP_008452372.1 (PREDICTED: SNF1-related protein kinase catalytic subunit alpha KIN10-like isoform X1 [Cucumis melo] >XP_008452373.1 PREDICTED: SNF1-related protein kinase catalytic subunit alpha KIN10-like isoform X1 [Cucumis melo])

HSP 1 Score: 78.6 bits (192), Expect = 6.2e-12
Identity = 37/42 (88.10%), Postives = 39/42 (92.86%), Query Frame = 0


Query: 1   MLVVDPLRRISITQIRQHPWFQSHLPRYLAVKPLSTIRQLEQ 43
           +LVVDPLRRISI QIRQHPWFQ HLPRYLAVKPLSTI QLE+
Sbjct: 251 LLVVDPLRRISIPQIRQHPWFQPHLPRYLAVKPLSTIPQLEK 292

[Close]

BLAST of CsGy5G010710 vs. NCBI nr
Match: XP_008452374.1 (PREDICTED: SNF1-related protein kinase catalytic subunit alpha KIN10-like isoform X2 [Cucumis melo])

HSP 1 Score: 78.6 bits (192), Expect = 6.2e-12
Identity = 37/42 (88.10%), Postives = 39/42 (92.86%), Query Frame = 0


Query: 1   MLVVDPLRRISITQIRQHPWFQSHLPRYLAVKPLSTIRQLEQ 43
           +LVVDPLRRISI QIRQHPWFQ HLPRYLAVKPLSTI QLE+
Sbjct: 251 LLVVDPLRRISIPQIRQHPWFQPHLPRYLAVKPLSTIPQLEK 292

[Close]

BLAST of CsGy5G010710 vs. NCBI nr
Match: XP_008452375.1 (PREDICTED: SNF1-related protein kinase catalytic subunit alpha KIN10-like isoform X3 [Cucumis melo])

HSP 1 Score: 78.6 bits (192), Expect = 6.2e-12
Identity = 37/42 (88.10%), Postives = 39/42 (92.86%), Query Frame = 0


Query: 1   MLVVDPLRRISITQIRQHPWFQSHLPRYLAVKPLSTIRQLEQ 43
           +LVVDPLRRISI QIRQHPWFQ HLPRYLAVKPLSTI QLE+
Sbjct: 251 LLVVDPLRRISIPQIRQHPWFQPHLPRYLAVKPLSTIPQLEK 292

[Close]

BLAST of CsGy5G010710 vs. NCBI nr
Match: XP_008452376.1 (PREDICTED: SNF1-related protein kinase catalytic subunit alpha KIN10-like isoform X4 [Cucumis melo])

HSP 1 Score: 78.6 bits (192), Expect = 6.2e-12
Identity = 37/42 (88.10%), Postives = 39/42 (92.86%), Query Frame = 0


Query: 1   MLVVDPLRRISITQIRQHPWFQSHLPRYLAVKPLSTIRQLEQ 43
           +LVVDPLRRISI QIRQHPWFQ HLPRYLAVKPLSTI QLE+
Sbjct: 120 LLVVDPLRRISIPQIRQHPWFQPHLPRYLAVKPLSTIPQLEK 161

[Close]

BLAST of CsGy5G010710 vs. TAIR10
Match: AT3G01090.2 (SNF1 kinase homolog 10)

HSP 1 Score: 66.6 bits (161), Expect = 4.4e-12
Identity = 27/42 (64.29%), Postives = 37/42 (88.10%), Query Frame = 0


Query: 1   MLVVDPLRRISITQIRQHPWFQSHLPRYLAVKPLSTIRQLEQ 43
           MLVVDP++R++I +IRQHPWFQ+HLPRYLAV P  T++Q ++
Sbjct: 274 MLVVDPMKRVTIPEIRQHPWFQAHLPRYLAVPPPDTVQQAKK 315

[Close]

BLAST of CsGy5G010710 vs. TAIR10
Match: AT3G29160.1 (SNF1 kinase homolog 11)

HSP 1 Score: 63.9 bits (154), Expect = 2.8e-11
Identity = 27/44 (61.36%), Postives = 36/44 (81.82%), Query Frame = 0


Query: 1   MLVVDPLRRISITQIRQHPWFQSHLPRYLAVKPLSTIRQLEQNN 45
           ML+VDP++RI+I +IRQH WFQ+HLPRYLAV P  T+ Q ++ N
Sbjct: 252 MLIVDPVKRITIPEIRQHRWFQTHLPRYLAVSPPDTVEQAKKIN 295

[Close]

BLAST of CsGy5G010710 vs. TAIR10
Match: AT5G39440.1 (SNF1-related protein kinase 1.3)

HSP 1 Score: 62.8 bits (151), Expect = 6.3e-11
Identity = 27/42 (64.29%), Postives = 34/42 (80.95%), Query Frame = 0


Query: 1   MLVVDPLRRISITQIRQHPWFQSHLPRYLAVKPLSTIRQLEQ 43
           ML+VDP  RISIT+IRQHPWF +HLP YL++ PL TI Q ++
Sbjct: 250 MLMVDPTMRISITEIRQHPWFNNHLPLYLSIPPLDTIDQAKK 291

[Close]

BLAST of CsGy5G010710 vs. Swiss-Prot
Match: sp|Q38997|KIN10_ARATH (SNF1-related protein kinase catalytic subunit alpha KIN10 OS=Arabidopsis thaliana OX=3702 GN=KIN10 PE=1 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 7.9e-11
Identity = 27/42 (64.29%), Postives = 37/42 (88.10%), Query Frame = 0


Query: 1   MLVVDPLRRISITQIRQHPWFQSHLPRYLAVKPLSTIRQLEQ 43
           MLVVDP++R++I +IRQHPWFQ+HLPRYLAV P  T++Q ++
Sbjct: 274 MLVVDPMKRVTIPEIRQHPWFQAHLPRYLAVPPPDTVQQAKK 315

[Close]

BLAST of CsGy5G010710 vs. Swiss-Prot
Match: sp|P92958|KIN11_ARATH (SNF1-related protein kinase catalytic subunit alpha KIN11 OS=Arabidopsis thaliana OX=3702 GN=KIN11 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 5.1e-10
Identity = 27/44 (61.36%), Postives = 36/44 (81.82%), Query Frame = 0


Query: 1   MLVVDPLRRISITQIRQHPWFQSHLPRYLAVKPLSTIRQLEQNN 45
           ML+VDP++RI+I +IRQH WFQ+HLPRYLAV P  T+ Q ++ N
Sbjct: 252 MLIVDPVKRITIPEIRQHRWFQTHLPRYLAVSPPDTVEQAKKIN 295

[Close]

BLAST of CsGy5G010710 vs. Swiss-Prot
Match: sp|A2XFF4|OSK3_ORYSI (Serine/threonine protein kinase OSK3 OS=Oryza sativa subsp. indica OX=39946 GN=OSK3 PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 6.3e-08
Identity = 25/39 (64.10%), Postives = 31/39 (79.49%), Query Frame = 0


Query: 1   MLVVDPLRRISITQIRQHPWFQSHLPRYLAVKPLSTIRQ 40
           MLVVDP++RI+I +IR+H WFQ  LPRYLAV P  T +Q
Sbjct: 249 MLVVDPMKRITIREIREHQWFQIRLPRYLAVPPPDTAQQ 287

[Close]

BLAST of CsGy5G010710 vs. Swiss-Prot
Match: sp|Q852Q0|OSK3_ORYSJ (Serine/threonine protein kinase OSK3 OS=Oryza sativa subsp. japonica OX=39947 GN=OSK3 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 6.3e-08
Identity = 25/39 (64.10%), Postives = 31/39 (79.49%), Query Frame = 0


Query: 1   MLVVDPLRRISITQIRQHPWFQSHLPRYLAVKPLSTIRQ 40
           MLVVDP++RI+I +IR+H WFQ  LPRYLAV P  T +Q
Sbjct: 249 MLVVDPMKRITIREIREHQWFQIRLPRYLAVPPPDTAQQ 287

[Close]

BLAST of CsGy5G010710 vs. Swiss-Prot
Match: sp|B8BBT7|OSK4_ORYSI (Serine/threonine protein kinase OSK4 OS=Oryza sativa subsp. indica OX=39946 GN=OSK4 PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 6.3e-08
Identity = 25/39 (64.10%), Postives = 31/39 (79.49%), Query Frame = 0


Query: 1   MLVVDPLRRISITQIRQHPWFQSHLPRYLAVKPLSTIRQ 40
           MLVVDP++RI+I +IR+H WFQ  LPRYLAV P  T +Q
Sbjct: 249 MLVVDPMKRITIREIREHQWFQIRLPRYLAVPPPDTAQQ 287

[Close]

BLAST of CsGy5G010710 vs. TrEMBL
Match: tr|A0A1S3BTQ3|A0A1S3BTQ3_CUCME (Non-specific serine/threonine protein kinase OS=Cucumis melo OX=3656 GN=LOC103493434 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 4.1e-12
Identity = 37/42 (88.10%), Postives = 39/42 (92.86%), Query Frame = 0


Query: 1   MLVVDPLRRISITQIRQHPWFQSHLPRYLAVKPLSTIRQLEQ 43
           +LVVDPLRRISI QIRQHPWFQ HLPRYLAVKPLSTI QLE+
Sbjct: 251 LLVVDPLRRISIPQIRQHPWFQPHLPRYLAVKPLSTIPQLEK 292

[Close]

BLAST of CsGy5G010710 vs. TrEMBL
Match: tr|A0A1S3BTN0|A0A1S3BTN0_CUCME (SNF1-related protein kinase catalytic subunit alpha KIN10-like isoform X7 OS=Cucumis melo OX=3656 GN=LOC103493434 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 4.1e-12
Identity = 37/42 (88.10%), Postives = 39/42 (92.86%), Query Frame = 0


Query: 1   MLVVDPLRRISITQIRQHPWFQSHLPRYLAVKPLSTIRQLEQ 43
           +LVVDPLRRISI QIRQHPWFQ HLPRYLAVKPLSTI QLE+
Sbjct: 251 LLVVDPLRRISIPQIRQHPWFQPHLPRYLAVKPLSTIPQLEK 292

[Close]

BLAST of CsGy5G010710 vs. TrEMBL
Match: tr|A0A1S3BUT7|A0A1S3BUT7_CUCME (Non-specific serine/threonine protein kinase OS=Cucumis melo OX=3656 GN=LOC103493434 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 4.1e-12
Identity = 37/42 (88.10%), Postives = 39/42 (92.86%), Query Frame = 0


Query: 1   MLVVDPLRRISITQIRQHPWFQSHLPRYLAVKPLSTIRQLEQ 43
           +LVVDPLRRISI QIRQHPWFQ HLPRYLAVKPLSTI QLE+
Sbjct: 120 LLVVDPLRRISIPQIRQHPWFQPHLPRYLAVKPLSTIPQLEK 161

[Close]

BLAST of CsGy5G010710 vs. TrEMBL
Match: tr|A0A1S3BUH4|A0A1S3BUH4_CUCME (SNF1-related protein kinase catalytic subunit alpha KIN10-like isoform X9 OS=Cucumis melo OX=3656 GN=LOC103493434 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 4.1e-12
Identity = 37/42 (88.10%), Postives = 39/42 (92.86%), Query Frame = 0


Query: 1   MLVVDPLRRISITQIRQHPWFQSHLPRYLAVKPLSTIRQLEQ 43
           +LVVDPLRRISI QIRQHPWFQ HLPRYLAVKPLSTI QLE+
Sbjct: 251 LLVVDPLRRISIPQIRQHPWFQPHLPRYLAVKPLSTIPQLEK 292

[Close]

BLAST of CsGy5G010710 vs. TrEMBL
Match: tr|A0A1S3BTQ9|A0A1S3BTQ9_CUCME (SNF1-related protein kinase catalytic subunit alpha KIN10-like isoform X6 OS=Cucumis melo OX=3656 GN=LOC103493434 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 4.1e-12
Identity = 37/42 (88.10%), Postives = 39/42 (92.86%), Query Frame = 0


Query: 1   MLVVDPLRRISITQIRQHPWFQSHLPRYLAVKPLSTIRQLEQ 43
           +LVVDPLRRISI QIRQHPWFQ HLPRYLAVKPLSTI QLE+
Sbjct: 251 LLVVDPLRRISIPQIRQHPWFQPHLPRYLAVKPLSTIPQLEK 292

The following BLAST results are available for this feature:

BLAST of CsGy5G010710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149632.1	7.8e-15	100.00	PREDICTED: SNF1-related protein kinase catalytic subunit alpha KIN10-like [Cucum...	[more]
XP_008452372.1	6.2e-12	88.10	PREDICTED: SNF1-related protein kinase catalytic subunit alpha KIN10-like isofor...	[more]
XP_008452374.1	6.2e-12	88.10	PREDICTED: SNF1-related protein kinase catalytic subunit alpha KIN10-like isofor...	[more]
XP_008452375.1	6.2e-12	88.10	PREDICTED: SNF1-related protein kinase catalytic subunit alpha KIN10-like isofor...	[more]
XP_008452376.1	6.2e-12	88.10	PREDICTED: SNF1-related protein kinase catalytic subunit alpha KIN10-like isofor...	[more]

BLAST of CsGy5G010710 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G01090.2	4.4e-12	64.29	SNF1 kinase homolog 10	[more]
AT3G29160.1	2.8e-11	61.36	SNF1 kinase homolog 11	[more]
AT5G39440.1	6.3e-11	64.29	SNF1-related protein kinase 1.3	[more]

BLAST of CsGy5G010710 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q38997\|KIN10_ARATH	7.9e-11	64.29	SNF1-related protein kinase catalytic subunit alpha KIN10 OS=Arabidopsis thalian...	[more]
sp\|P92958\|KIN11_ARATH	5.1e-10	61.36	SNF1-related protein kinase catalytic subunit alpha KIN11 OS=Arabidopsis thalian...	[more]
sp\|A2XFF4\|OSK3_ORYSI	6.3e-08	64.10	Serine/threonine protein kinase OSK3 OS=Oryza sativa subsp. indica OX=39946 GN=O...	[more]
sp\|Q852Q0\|OSK3_ORYSJ	6.3e-08	64.10	Serine/threonine protein kinase OSK3 OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
sp\|B8BBT7\|OSK4_ORYSI	6.3e-08	64.10	Serine/threonine protein kinase OSK4 OS=Oryza sativa subsp. indica OX=39946 GN=O...	[more]

BLAST of CsGy5G010710 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BTQ3\|A0A1S3BTQ3_CUCME	4.1e-12	88.10	Non-specific serine/threonine protein kinase OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
tr\|A0A1S3BTN0\|A0A1S3BTN0_CUCME	4.1e-12	88.10	SNF1-related protein kinase catalytic subunit alpha KIN10-like isoform X7 OS=Cuc...	[more]
tr\|A0A1S3BUT7\|A0A1S3BUT7_CUCME	4.1e-12	88.10	Non-specific serine/threonine protein kinase OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
tr\|A0A1S3BUH4\|A0A1S3BUH4_CUCME	4.1e-12	88.10	SNF1-related protein kinase catalytic subunit alpha KIN10-like isoform X9 OS=Cuc...	[more]
tr\|A0A1S3BTQ9\|A0A1S3BTQ9_CUCME	4.1e-12	88.10	SNF1-related protein kinase catalytic subunit alpha KIN10-like isoform X6 OS=Cuc...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011009	Kinase-like_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004674	protein serine/threonine kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G010710.1	CsGy5G010710.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 40..45
IPR011009	Protein kinase-like domain superfamily	SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	coord: 1..39

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy5G010710	Melon (DHL92) v3.6.1	cgybmedB314
CsGy5G010710	Melon (DHL92) v3.6.1	cgybmedB315
CsGy5G010710	Wild cucumber (PI 183967)	cgybcpiB227
CsGy5G010710	Cucumber (Chinese Long) v3	cgybcucB232
CsGy5G010710	Cucumber (Chinese Long) v2	cgybcuB225