CsGy5G010020 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy5G010020
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	phytanoyl-CoA dioxygenase
Location	Chr5 : 8900915 .. 8910169 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAAGAAAGAAGAAAGAAGAAAGAAGAAAGAAGAATATCGGTTGAGTTCTTCCCATTTCTCTTCCTTCATTTCATTCAATCTGATCGAAAATCCAATAGGTAGTGATTGGAGCCAGACCGCCATGGGAATTGTTCCTAATCTCACTTCGGATCAACTCCAATTCTTTCATTCTCACGGTACCTTTCAATCCTTTTTCCATCTTCTTCGCACTTCCAATTTCCATAATTTTGGCTTACCCAACTTCTTCTTCTTCTTCTTCTCCTCCTCCTCCTCCTCTTTTCTCCACCTTTCTTGCAGGTTATCTTGTGATTGAATCATTCGCCACTCCTGATGAAATTCATGCCATGAGAAACCGGATGGAACACTTGCTTCATGGATTTGACTGCTCCACTTCCTCTGTTTTCTCTACTGTTAATCAGGTTTTTCTTTGATACCAAATTTCTATCTGCTAACGTTATGCTCTGCTGATGTTGATGTATTCTTTTTCCACGTTTCTTTTCGTTACCTCTACAGCAGCAGTCGACCGACGATTACTTCCTTCAAAGCGCTGAGAATATTTCCTTCTTTTTTGAGGGTATCTACAATTTCTACTTACGTGTTTTATTGCGATACTTTCGTTTCGACTTTTTCTTCTTTTTTTTTTTTCCTTCCCGTGTTGAGGAACATTAAATGTGGACATGATTTGGTCTTGGATGGGAATCTGTCTTCAACTATTCATTTCAGGCTAGGATTTAGCAACTCTAAATGATCAATGTGTAAAACTTGTTCTGTTAATAAGAATTGAATATGCTATTTGACATGTCTTTTAATACTCAGTTTTCATAAGTATGGTTCATGCCAATTGGCCCCCTTTTTTATTTCTACAATTTTTTTTTTTTTTTTGCAGAAAAAGCATTTGGAGAGGATGGAAACTTGAAACAAGAAAAGGAGCTCTCAATTAACAAAGTTGGTCATGGTTTGTATTTGTCTATTTTAGCAGACTGTTGACCTAATAGAAACTTTTGATCTGTCTTTTTTATCTATTTAGCATGGGTTTCAATTTGACCTTCGCTTACTTGGGTTTAACTGTACTCCAAACTTTTGTTACTTTCTCTTGGCCTTGGTGACTCTCAAAATGGTTGTTCTCCATGCCTAGAAGCTTATGAAAACCTTAGACTGGAGCCTTTTCTTTTATGGTGCAAAATTGGTAACTTTTTTTTTTCTTTTAACTTCCCTTTTGCAGCATTACATGAGTTTGACCCAGTTTTCAAAAGCTTCTCCGACTCTGAGAAGTTTTCAGGTTTATTGTTGTCATTGGGATACAAGAGGCCGATAGCCATTCAGTCTATGTACATATTTAAGGTTCTCTCTACATTGCAGTTTAACTAATCAATACTAGTTTATTAATTTATTCCATTAAGTTAATGAGACAATAATGTTTGGAAAACTCACTGACAGCAACCAGGTATTGGAGGTGAAGTAGTGCCTCACCAGGATAACTCGTTTCTTTACACTGAACCAACTACATGCACAGGGCTGTGGCTGGCACTTGAAGATGCAAATACGACAAATGGCTGTCTTTGGGCTATTCCTGGATCACATAAAAGTATCCCCTGAAAAGCCACTTCTTAGATAGTGGAAATGTCTTTCCTGGTGTCTGATCAATTATATTTCATGTTGATTTTTATTGTATCTAGATGGACTTGTTAGAAGGTTTCTTAGAGGCGACAAAGGAGTGTACTTTGATCAGCCTTCTCCTACTTACAACAAGAAAGATTTTGTGCCTATTGAAGTGAAAGCTGGATCTTTGGTTGTAATTCATGGAGACGTTATTCATCAAAGGTATGTCATTTGTGGAAGAAATACTAAAACTGTTGTATTAGTTGATAAACCATGATTTGTCTTTAAATTTATACCATAGTCAAATTTTCACTTTTTAAAAAAATTTATTTTAAGCAACTCTTGTTGTGTTTCCATCTCTATAGAGAGAAAACCATTCTGATTCATTCTGAGCATGTTTTTAAGTGACTACACTGCATACCAAATGAGTAAGGATTCTCCCTTACTAAATATGACATTAAGGTTGATAATAACAGAACACATGGGATTGAGTCACAAAACAACACAAGAACTAAGAACAAGATAACAACAACTAAACACAAGAGAGCTGCACTCTCCCTATCATGAACCACTGTTCATACACAAAATTCAAGATAGCTAACCCTAGCCAGAACAAAAATTTAAATACTGACATTTTCTTGCTGCTCATACAACCCAGGACCGCAACCAGCTAATGCTAATGATGCTAATTCATATAAAAAGAGATGTATTTTGTTATGGTTTTACAATGTCTCACAATTTGTGTTTGTTTATAGTATTGGTTAACATTGGATTTCTACATCATCATATGTTAAGTTTGGTTTATTTTTCTAAGCACCATGAGGAGCATGGGCTAACTCTCCGAGAGTTTTATGTTTTTTCTTAAAATGTGAATTAAGATAATGTTATCTTCAAGTTGATTGCTGTCCAATTTCTCTGATGTGTGAACTATAGCTTTGAGAATCAGTCTCCAAAATCAAGACATGCGTATAGCCTGCACGTGGTTGATACAGAAGGTTGTGTATGGGCTCAAGATAATTGGTGAGTTCGTAAAGAATTTGCGCACTTTACCTGTTCTTATTTTTCATTAAGAAACTTATTTTATCCTGTCTTTGTAGGAAGTTGTACTAGTTTCGATATTAATTCTTCTGTTGACTATTGTTAAAATTGTTTTCAGCAGGCATTATAAATTATTTTTATTATTATTTTACATAGAATTTAGAAAAGGGAAAAAAGGACTTCCACTGAGAGATATAATCACAAGATGCAATGGGAAAGAAAAAATGTGAGCCAACAGTTAGTTAATATGTGCATGGATAGCCCACACTTGCTAACTAAACTTCCAATTATTAAATAAAGTGATACCTGAAAGTAATTGAGGCTCAAAGCAGGACCCGTTTTTTCATTTAAAGGTAATGGAAGTTTTGTTGACAAATGAAATTAGAAATGAGAGTAGGAGATTCCCAAGCCATATGGATTTCAAAAGGATCTTCCATCTGACTAACAGAGTGTTCAGACTATAGTTTGGAAAAGGAAGATTAGATTTAAACATATGTTATGCCAAAGTGAGAACAGAGTTCAAAACAAAATTAAAGTATCCTTCATCTCGTTATAAATGCTATTGTTTCTTTCTAATCTAACGAGAGGTTCCCAAAGAAGAGTAATAATGTGGAGCTAGAATTTCTCTCTTTCTTAAATGGGTGACACAACAATGTGGAAACAAGGAAATCTCTTAATTTAAAGGAATTGGCAACTGCAGCTTGCCAACTGAAAGATTCTTGGATGAAAAACCAAAATTTATGAGCATAGGGGTACAGTAGTAAACCTGAGAAGAATGCATAAGAGAGTTCAGTATTTATTTGATTGCGTTTAAGAAATTTATGTTTTTGGGATTTTGAACCATGTATATGTGTCCGCCCGTCCCTAGTTGGTTTGTGGCATTGAGAGTTTGTTAATACATGCCACTTAGGGTTGATTGTTCGGGTGAATTCAATAAAACAAATAATAAAGTAATAAAGTAAAAGTCTTGTCCTTATCAATATTATTTTTCTCGTTGTAAATTTTGTATTTTCATATCAATTGAGTTTCCACCATTAGTCGTGCATCTAAGGTATGAAAAACTGCTTAGGTCATGGGACAAAACATGAACGGTTCAGGGTTGAATTTGATTTGTTTTAAACGAAATACACACTAGAATAAAGTGCTATTAAAATATGCACCAAAATAAAATTACTATGAAAATGTAAAGTGGCAGGGTGAGACTATTGCTAAAATTTAAACAAAATATAGAATTTTCTATACAAAATAGGAGTCATAATGGGGTTTGACCTAGGTGGGTATTAGCCTAGAAATGTCTATATTACCTTTACCATTAAATCCATGACTAGCATTCTAGATCTAGGAGTGTTAACATCCGGTGTCACAAGTCTCTGCTCTGCGATCTCCATCTTTATCATATTTCATCCCTTAAAAATCATCTTGTATTTATTTTTTATCTTGGTTGGGGAGCTCAGTGTCATTTCCTTTTAGGTCTAGCTGCTCTTTCATTGATAGGGATGCCACTGATGCCATTTCTTTGTTGTTGTCATTGGGAGAGTTAAGCTTTAGAAGTGGAAGAAGGGATGTGCATATTTGGAATCTTGATCATTTGGAGGGCTTCTCTTGTAACTCTTTTTTTTTTGTTGTCGGTAGGACCATTCTCCTTCAAGAGAGTATATTTTTCCTGCCCTTTGGACGATTAAAATTTCCAAGTGATATTCTTTATTTGGCAAGTTTTAAATGAACATGTAAACACCTCGAATTAGTCGTTAAGGAGGATATGGTTGTTATGGGTCTGTTTTGTTGTATTCTTTATCAAAAAACAAAGGAAGACCTGAATCACATCCTTTAGAAATGTGTGTTTGCACTCTCTGGAATTTGTTCCTCTAGACTTTTGGCTTTGCTTATGTCCTTCAGTCAATAATGTGATTAGGGAGTTCCTCTCCGTTAGTGAAAAGGGTTGTTCTTTTGGTTGGTGGGGTCGGGTGCTGTCACTTGGAATCTTTGGGGTGAAAGGAACAGTAGACACTAGGTTGGATAAGGACCTAGCGACTTTTTGATCCTTATGTTTCATGTTTCCATTTGGAAGTGGTTGTTTTGTCAAAACAAAAAATAATAAAAAATAAAAAAGAATCAAGTGTCACATCACATAATCGACATTCTTTATCGGGGTAAGTAAGCCAATCAGGTTGTACTCACTATTTTGGAGAGAAAAGTATATATTATTCAATATTGAATCAAAGTAAAGTTACATATATATATAGAACATAGAAACTCTAGACAAAATGTACAATTACGATAAAGGACACATATAATTTAAGTATATATTATAACACTCCCCCTCAAGCTAGAGCAAATATGTCAATCATGTCCAACTTGTTGCACAAATAGCTTACTCTTGCTCCATTTACAACTTTTGTAAGAATATCTCCCAATTGTTCTCCTGTGAAGACTAACTCTTCTGGTATTTTCGCGAACAAAGTGACAATCCACCTCAATATTTTTAGGTCGTTCATAAAATACTAAGTTAGATGCAATGTGGAGTGCAACTTGATTATCACACCATAGTTTAGTTGACACACTAACGCTGAAGCCTATCTCAGATAATAGATTTATCCACACTATTTTGCGCACAGATTGTGCCATAGCCCTATATTCTGATTCAAAACTCGAACGAGAAACAATATTTTGTTTCTTACTCTTTCATGAGACCAAGTTTCCGTCTACAAAGACCCAATATCTAGAGGTCGATCTTCTATCCTCTCAAGATCTAGCTCAATCAATATCAGAAGAACATTCAACTCTCGTATGTCCATGATCTTTATATAAGATCCCGCATTCAGGAGCAACTTTAAGACAAAATAGAATTTATTCTACTGCAGCCCAATGATCCACGGTAGGAGAAGACATGAACTGAATTACAAGACTTACAAAATAAGCAATGTCTTGTCGTGTCACTGTTAAATAGTTCAACTTCCCAACTAATCTTCTATATTTCTTAGGATATTTAAATAATTCTTCTTTAGCAAGTTGCTGATTTGGTATCATCGGAGTACTAGTTGGTTTGACTTCTAGTTTTCCTATCTCAGACAACAAATCAAGTACATATTTTTTATGAGATAAATAAATATCTTTCTTGCTTCTCATCACTTCAATACCAAAAAATATTTCAAATGTCCCAAATCTTTCGTATGAAATTGACCTTGAAGGAAAGTTTTGAGAGACGAAATACCCGATGCATCATTTCTAGTAATAACAACATCAACATACACAAACAACAAAACAATACCATTATCATATTGTTGATAGAAAACATAATGATCAAATGTACACTTCAACACACCAAAGTGTACTAGATCTTGACTAAACTTACCAACCACACACGTGGATTCTGTTTCAAACCATACAAAGATTTTCAAAGGTGACATACTTTATCACTCTCCCCCTAAGCGACAAACGCAAGTGATTGCTCCATACAAACTTCCTCCTTAAGATCACCATGCAGAAAAACACTCTTGATGCCAAGCTGATGCAAAGGCCATTTATGGGTAGCAACCATGGAAAGAAAAAGTCGGATGGAAGTTAATTTGGCAACTGGAGAAAATGTAATTGAATAATTAGTGCCATAGATTTGGGCATAACCTTAGGCAAGAAGATAGCTTTCAACAGAGCCACTGTTCTATTAGGTTTGACCTTGATAGCAAACACCCATTTACACTCAAAGGTCTTCTTTCTTGTAGGATGAGATACTAAATCCTAAGTACCATTATCATCTAAAGCAGTCATCGCCTCAATCATTACACTACGCCAGCCAGGATTAGACAAAGCTTCATGAATAGTGTTAGGAATAGATGTGGAGTCAAAGGACTTAATAAAATCATTGGTTAGAGAAAACAACTGATGATATGAAACAAACGAAGAAATGGGGTTACCCTAGGTCTTTTTTTAGGTAAAAGCTGCTGAAGGCTTTTAGGGAAAGCATTCCAGCCTTCTCAAAGGAGCTGGGCACTGTTTGTTTGTTTTCCTTATTTTCCTTATAACTTTTCTTTGCTGGATTTCTCATGTTATGTTGTGAAGTGGATAATATTGCCCTATCAATACATTAAACAGAGAAATTCTCTGTTTTATTCTCTTGCTTTTCCGAGTTTTAGGACAAGGTATCTTAACACACATTCATAATAAATAGATCCATTTAATTTATGTTCTTTGATCTTGGAGGCTAAGGGAATTACATTAGAAACCACCAAATTCTTTATATCGGCCATACTGAAGGCGCACACTGTCCATAGCCCACAAAAGGGAAGAAAACAACCAAAATGATTAACACCACCAATCAGCTGCAAAATTGGAAAAAAAGTCAAGGATGTATTCTTCAACTTTTGTCAAATGGGAATAGATTTCAATGAAACCAAATTCGTAGACGGACCGAAAAAGAGGATTCGAGACAAGGCTATAAGACAGATATTGAATCGGAGCAGCCACGTGCTCCCACACACTGGCGTGTGGGGACGTTGCAGAAGTGATCTGGTGTATGAGCTTCACACGCGGTGATTTTCGACGAACGGCAACGGCAGAATGCAGCTGATTGTGGTGGTGCTTCTACTGAGATGGACGGTGTCAACAAATAGCCACTCAAAGATGACCTAAACTTAAACCCTAATGGAGAGGGAAGCTGTCAAGTGAATATTTCCGAACCTTCCAAACCCTAGAAGGCTTTGATACCATACTCACTCTTTTGGAGAAAAGTATATATTATTCAATACTGAATTAGAATGAAGTTACATATGATAATAAATAGCAAAAAAAAATTATGATAATATAATTCATGTCACTTACATTTTCAAAATTGTAAAAATAGCAAATTTAAAACCAGATTACCGTCATATTTGTCAAATTTGCAATATGCAAAAAAATGTGTTATGAGCTGTTTTTTTCTAAAAAATTTTGTCAGCTAATGTAATTTCCAAAAACCTTAGAAGAATATACAATTACAATGGACACATATAATATAAATATATATTATAAAAAAGGTGTTAAAGGATTTTCTTGATTGGCTCATTCTTTCCTTAACTAAGGGATCGAAGCTGAAGTCTACTAAACAATTTATTTTGGAAAAAAATTAGAGGGTGGCAATTGCCACCACTCAAAATACCTTGTGTATTTAAAACAATTTTGATCAAACAAATTTAAATAGAAATGAGTTTTTGGAAAAACACTTTTTTCTTTAAAACCAACCTAGTCGGGCCCTAAATCTCTGGAGTTGTTTTTTTACTAACATCATTGCTCTGTTTTAGGTTTCACTTTTGAGGTAATGATATTTCAATATGCAGATTGATGGAATTGGCAGTAGTTGAGTTAGGAAGGAACTTTTGGTCTACCTTAGAACCTCCAGCTTAAGTTTTGGGATGTTGGCACTGTTTGCCTTGACGACTCTTCTTAAATTTTTATATTTGTGTTAATTGGAGATACTATCCAATAAAAGATGCAGACATTGTTGATTCATAGTTCAATTATAAAAATGTAAAGAGTTTGTATTACCGTAGGATGTAGCAATCCTGACCTTTTGATCCTTCATTCTTATTCAGGATTAGGAGAAAAGTGCAACCTGAGCCTCTATACGAATCTTGATCAAATCTCATGGTTTGTTTCTTCTCTACATCTCCATAAAAAGAGGGAAAAAAACACTTGCCCCTGGTGTTTCGCAACCAGCTACAAACACAGCTGTCACGAAGGTGCTGAAGTTTAATAAAATATGTAATCTTTCTAGCTTTAAGAGTTTCCTTACTATTGCTAATTGTTCAAAACTTCCCAAGCTTTATATATATATATATTTTAGTTTTGAACAATATTCTCACAACCCAGGATAGACCACAAATCTGCTGGTAGAGAGAGCTCCAAAACACCAACACAGCGGATAGGTCCCATTAGTACACTCAAATCTAGTTATCAGAAGAGTCGGGAAGAGTTTTCAAAAACAAAAAAAATTAAAATTAAAACTATGGTTCAACCAATAAACATTAGAAAAAGTACCTTAAACTTCTTATACCTATAGTATCTCAAAGTACTTTGGATCAGACATTGAAGGCTAGAAAAAGTGTGTCAAAGGCATTAGCAGTAAACTTATGTGTTTAATTGCAATTCTAAGCCTGCCACGAGTCACAATCTAGACAATAATTCAGATTGAAAAACAATAGTGCAAGTAGAAGAGTGTGGATCATAAGGGCAATAACTAACCCTTTATTGTTAAGTATTATTTGCAATTTTTCCTTCTATTTTTGTCTTCGTGAAATTAAATAGTAAATAGGCAAAATGAGAAGAATAAAAGTATTGTGTATTATTGTGCATCTTGATTGATCAATCAAGAATAACAAGCTTCTGGTGCAAGTACAACTCAATATGGTAACTTCATATCAACATATTGACAGGAATTACAAATCTCTTTAATATGAACATTTTATATTTTGATCACCTTGATTCATGCACATTTTGAATTGACAATCTTTTTTAATCCCCTTAAATTGGTCAAAATCAATCACTCTTTATTTACTAGTATCGTTGCTAATTGTTCTCTTCTCTCTAAAGGCTCGTTATCTCTCTCTATATATTCCTTCGTTGCAAATTTTATTGAAGTAATTGT

mRNA sequence

AAGAAGAAAGAAGAAAGAAGAAAGAAGAAAGAAGAATATCGGTTGAGTTCTTCCCATTTCTCTTCCTTCATTTCATTCAATCTGATCGAAAATCCAATAGGTAGTGATTGGAGCCAGACCGCCATGGGAATTGTTCCTAATCTCACTTCGGATCAACTCCAATTCTTTCATTCTCACGGTTATCTTGTGATTGAATCATTCGCCACTCCTGATGAAATTCATGCCATGAGAAACCGGATGGAACACTTGCTTCATGGATTTGACTGCTCCACTTCCTCTGTTTTCTCTACTGTTAATCAGCAGCAGTCGACCGACGATTACTTCCTTCAAAGCGCTGAGAATATTTCCTTCTTTTTTGAGGAAAAAGCATTTGGAGAGGATGGAAACTTGAAACAAGAAAAGGAGCTCTCAATTAACAAAGTTGGTCATGCATTACATGAGTTTGACCCAGTTTTCAAAAGCTTCTCCGACTCTGAGAAGTTTTCAGGTTTATTGTTGTCATTGGGATACAAGAGGCCGATAGCCATTCAGTCTATGTACATATTTAAGCAACCAGGTATTGGAGGTGAAGTAGTGCCTCACCAGGATAACTCGTTTCTTTACACTGAACCAACTACATGCACAGGGCTGTGGCTGGCACTTGAAGATGCAAATACGACAAATGGCTGTCTTTGGGCTATTCCTGGATCACATAAAAATGGACTTGTTAGAAGGTTTCTTAGAGGCGACAAAGGAGTGTACTTTGATCAGCCTTCTCCTACTTACAACAAGAAAGATTTTGTGCCTATTGAAGTGAAAGCTGGATCTTTGGTTGTAATTCATGGAGACGTTATTCATCAAAGCTTTGAGAATCAGTCTCCAAAATCAAGACATGCGTATAGCCTGCACGTGGTTGATACAGAAGGTTGTGTATGGGCTCAAGATAATTGGATTAGGAGAAAAGTGCAACCTGAGCCTCTATACGAATCTTGATCAAATCTCATGGTTTGTTTCTTCTCTACATCTCCATAAAAAGAGGGAAAAAAACACTTGCCCCTGGTGTTTCGCAACCAGCTACAAACACAGCTGTCACGAAGGTGCTGAAGTTTAATAAAATATGTAATCTTTCTAGCTTTAAGAGTTTCCTTACTATTGCTAATTGTTCAAAACTTCCCAAGCTTTATATATATATATATTTTAGTTTTGAACAATATTCTCACAACCCAGGATAGACCACAAATCTGCTGGTAGAGAGAGCTCCAAAACACCAACACAGCGGATAGGTCCCATTAGTACACTCAAATCTAGTTATCAGAAGAGTCGGGAAGAGTTTTCAAAAACAAAAAAAATTAAAATTAAAACTATGGTTCAACCAATAAACATTAGAAAAAGTACCTTAAACTTCTTATACCTATAGTATCTCAAAGTACTTTGGATCAGACATTGAAGGCTAGAAAAAGTGTGTCAAAGGCATTAGCAGTAAACTTATGTGTTTAATTGCAATTCTAAGCCTGCCACGAGTCACAATCTAGACAATAATTCAGATTGAAAAACAATAGTGCAAGTAGAAGAGTGTGGATCATAAGGGCAATAACTAACCCTTTATTGTTAAGTATTATTTGCAATTTTTCCTTCTATTTTTGTCTTCGTGAAATTAAATAGTAAATAGGCAAAATGAGAAGAATAAAAGTATTGTGTATTATTGTGCATCTTGATTGATCAATCAAGAATAACAAGCTTCTGGTGCAAGTACAACTCAATATGGTAACTTCATATCAACATATTGACAGGAATTACAAATCTCTTTAATATGAACATTTTATATTTTGATCACCTTGATTCATGCACATTTTGAATTGACAATCTTTTTTAATCCCCTTAAATTGGTCAAAATCAATCACTCTTTATTTACTAGTATCGTTGCTAATTGTTCTCTTCTCTCTAAAGGCTCGTTATCTCTCTCTATATATTCCTTCGTTGCAAATTTTATTGAAGTAATTGT

Coding sequence (CDS)

ATGGGAATTGTTCCTAATCTCACTTCGGATCAACTCCAATTCTTTCATTCTCACGGTTATCTTGTGATTGAATCATTCGCCACTCCTGATGAAATTCATGCCATGAGAAACCGGATGGAACACTTGCTTCATGGATTTGACTGCTCCACTTCCTCTGTTTTCTCTACTGTTAATCAGCAGCAGTCGACCGACGATTACTTCCTTCAAAGCGCTGAGAATATTTCCTTCTTTTTTGAGGAAAAAGCATTTGGAGAGGATGGAAACTTGAAACAAGAAAAGGAGCTCTCAATTAACAAAGTTGGTCATGCATTACATGAGTTTGACCCAGTTTTCAAAAGCTTCTCCGACTCTGAGAAGTTTTCAGGTTTATTGTTGTCATTGGGATACAAGAGGCCGATAGCCATTCAGTCTATGTACATATTTAAGCAACCAGGTATTGGAGGTGAAGTAGTGCCTCACCAGGATAACTCGTTTCTTTACACTGAACCAACTACATGCACAGGGCTGTGGCTGGCACTTGAAGATGCAAATACGACAAATGGCTGTCTTTGGGCTATTCCTGGATCACATAAAAATGGACTTGTTAGAAGGTTTCTTAGAGGCGACAAAGGAGTGTACTTTGATCAGCCTTCTCCTACTTACAACAAGAAAGATTTTGTGCCTATTGAAGTGAAAGCTGGATCTTTGGTTGTAATTCATGGAGACGTTATTCATCAAAGCTTTGAGAATCAGTCTCCAAAATCAAGACATGCGTATAGCCTGCACGTGGTTGATACAGAAGGTTGTGTATGGGCTCAAGATAATTGGATTAGGAGAAAAGTGCAACCTGAGCCTCTATACGAATCTTGA

Protein sequence

MGIVPNLTSDQLQFFHSHGYLVIESFATPDEIHAMRNRMEHLLHGFDCSTSSVFSTVNQQQSTDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKFSGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTNGCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQSFENQSPKSRHAYSLHVVDTEGCVWAQDNWIRRKVQPEPLYES

Homology

[Close]

BLAST of CsGy5G010020 vs. NCBI nr
Match: XP_011655108.1 (PREDICTED: phytanoyl-CoA dioxygenase isoform X1 [Cucumis sativus])

HSP 1 Score: 594.0 bits (1530), Expect = 2.7e-166
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0


Query: 1   MGIVPNLTSDQLQFFHSHGYLVIESFATPDEIHAMRNRMEHLLHGFDCSTSSVFSTVNQQ 60
           MGIVPNLTSDQLQFFHSHGYLVIESFATPDEIHAMRNRMEHLLHGFDCSTSSVFSTVNQQ
Sbjct: 1   MGIVPNLTSDQLQFFHSHGYLVIESFATPDEIHAMRNRMEHLLHGFDCSTSSVFSTVNQQ 60

Query: 61  QSTDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKF 120
           QSTDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKF
Sbjct: 61  QSTDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKF 120

Query: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
           SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN
Sbjct: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180

Query: 181 GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQS 240
           GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQS
Sbjct: 181 GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQS 240

Query: 241 FENQSPKSRHAYSLHVVDTEGCVWAQDNWIRRKVQPEPLYES 283
           FENQSPKSRHAYSLHVVDTEGCVWAQDNWIRRKVQPEPLYES
Sbjct: 241 FENQSPKSRHAYSLHVVDTEGCVWAQDNWIRRKVQPEPLYES 282

[Close]

BLAST of CsGy5G010020 vs. NCBI nr
Match: XP_011655109.1 (PREDICTED: phytanoyl-CoA dioxygenase isoform X2 [Cucumis sativus])

HSP 1 Score: 587.4 bits (1513), Expect = 2.6e-164
Identity = 281/282 (99.65%), Postives = 281/282 (99.65%), Query Frame = 0


Query: 1   MGIVPNLTSDQLQFFHSHGYLVIESFATPDEIHAMRNRMEHLLHGFDCSTSSVFSTVNQQ 60
           MGIVPNLTSDQLQFFHSHGYLVIESFATPDEIHAMRNRMEHLLHGFDCSTSSVFSTVN Q
Sbjct: 1   MGIVPNLTSDQLQFFHSHGYLVIESFATPDEIHAMRNRMEHLLHGFDCSTSSVFSTVN-Q 60

Query: 61  QSTDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKF 120
           QSTDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKF
Sbjct: 61  QSTDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKF 120

Query: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
           SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN
Sbjct: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180

Query: 181 GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQS 240
           GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQS
Sbjct: 181 GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQS 240

Query: 241 FENQSPKSRHAYSLHVVDTEGCVWAQDNWIRRKVQPEPLYES 283
           FENQSPKSRHAYSLHVVDTEGCVWAQDNWIRRKVQPEPLYES
Sbjct: 241 FENQSPKSRHAYSLHVVDTEGCVWAQDNWIRRKVQPEPLYES 281

[Close]

BLAST of CsGy5G010020 vs. NCBI nr
Match: XP_008465221.1 (PREDICTED: phytanoyl-CoA dioxygenase isoform X3 [Cucumis melo])

HSP 1 Score: 571.2 bits (1471), Expect = 1.9e-159
Identity = 272/282 (96.45%), Postives = 276/282 (97.87%), Query Frame = 0


Query: 1   MGIVPNLTSDQLQFFHSHGYLVIESFATPDEIHAMRNRMEHLLHGFDCSTSSVFSTVNQQ 60
           MGIVPNL SDQLQFFHSHGYLVIESFATPDE+HAMRNRME LLHGFDCSTSSVFSTVNQQ
Sbjct: 1   MGIVPNLNSDQLQFFHSHGYLVIESFATPDEVHAMRNRMELLLHGFDCSTSSVFSTVNQQ 60

Query: 61  QSTDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKF 120
            STDDYFLQSAENISFFFEEKAFGEDGNLKQ K+LSINKVGHALHE DPVFKSFSDSEKF
Sbjct: 61  LSTDDYFLQSAENISFFFEEKAFGEDGNLKQGKKLSINKVGHALHELDPVFKSFSDSEKF 120

Query: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
           SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN
Sbjct: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180

Query: 181 GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQS 240
           GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTY+KKDFVPIEVKAGSLVVIHGDVIHQS
Sbjct: 181 GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYDKKDFVPIEVKAGSLVVIHGDVIHQS 240

Query: 241 FENQSPKSRHAYSLHVVDTEGCVWAQDNWIRRKVQPEPLYES 283
           FENQSPKSRHAYSLHVVDTEGCVWAQDNWIRRKVQ EPLYE+
Sbjct: 241 FENQSPKSRHAYSLHVVDTEGCVWAQDNWIRRKVQLEPLYET 282

[Close]

BLAST of CsGy5G010020 vs. NCBI nr
Match: KGN50849.1 (hypothetical protein Csa_5G289600 [Cucumis sativus])

HSP 1 Score: 567.0 bits (1460), Expect = 3.6e-158
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 1   MGIVPNLTSDQLQFFHSHGYLVIESFATPDEIHAMRNRMEHLLHGFDCSTSSVFSTVNQQ 60
           MGIVPNLTSDQLQFFHSHGYLVIESFATPDEIHAMRNRMEHLLHGFDCSTSSVFSTVNQQ
Sbjct: 1   MGIVPNLTSDQLQFFHSHGYLVIESFATPDEIHAMRNRMEHLLHGFDCSTSSVFSTVNQQ 60

Query: 61  QSTDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKF 120
           QSTDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKF
Sbjct: 61  QSTDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKF 120

Query: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
           SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN
Sbjct: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180

Query: 181 GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQS 240
           GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQS
Sbjct: 181 GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQS 240

Query: 241 FENQSPKSRHAYSLHVVDTEGCVWAQDNW 270
           FENQSPKSRHAYSLHVVDTEGCVWAQDNW
Sbjct: 241 FENQSPKSRHAYSLHVVDTEGCVWAQDNW 269

[Close]

BLAST of CsGy5G010020 vs. NCBI nr
Match: XP_016903345.1 (PREDICTED: phytanoyl-CoA dioxygenase isoform X1 [Cucumis melo])

HSP 1 Score: 545.4 bits (1404), Expect = 1.1e-151
Identity = 260/270 (96.30%), Postives = 264/270 (97.78%), Query Frame = 0


Query: 1   MGIVPNLTSDQLQFFHSHGYLVIESFATPDEIHAMRNRMEHLLHGFDCSTSSVFSTVNQQ 60
           MGIVPNL SDQLQFFHSHGYLVIESFATPDE+HAMRNRME LLHGFDCSTSSVFSTVNQQ
Sbjct: 1   MGIVPNLNSDQLQFFHSHGYLVIESFATPDEVHAMRNRMELLLHGFDCSTSSVFSTVNQQ 60

Query: 61  QSTDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKF 120
            STDDYFLQSAENISFFFEEKAFGEDGNLKQ K+LSINKVGHALHE DPVFKSFSDSEKF
Sbjct: 61  LSTDDYFLQSAENISFFFEEKAFGEDGNLKQGKKLSINKVGHALHELDPVFKSFSDSEKF 120

Query: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
           SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN
Sbjct: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180

Query: 181 GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQS 240
           GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTY+KKDFVPIEVKAGSLVVIHGDVIHQS
Sbjct: 181 GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYDKKDFVPIEVKAGSLVVIHGDVIHQS 240

Query: 241 FENQSPKSRHAYSLHVVDTEGCVWAQDNWI 271
           FENQSPKSRHAYSLHVVDTEGCVWAQDN +
Sbjct: 241 FENQSPKSRHAYSLHVVDTEGCVWAQDNCV 270

[Close]

BLAST of CsGy5G010020 vs. TAIR10
Match: AT2G01490.1 (phytanoyl-CoA dioxygenase (PhyH) family protein)

HSP 1 Score: 451.1 bits (1159), Expect = 5.2e-127
Identity = 204/280 (72.86%), Postives = 239/280 (85.36%), Query Frame = 0


Query: 1   MGIVPNLTSDQLQFFHSHGYLVIESFATPDEIHAMRNRMEHLLHGFDCSTSSVFSTVNQQ 60
           MGI  +LT DQL FFHS GYLVIESFA+ DEI  +R RM+ LL+ FDCS SS+FST NQ+
Sbjct: 1   MGITGSLTPDQLDFFHSQGYLVIESFASEDEIRGLRKRMDELLNQFDCSVSSIFSTKNQK 60

Query: 61  QSTDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKF 120
            +TD+YF +SAE ISFFFEEKAFG+DG LKQ K+LSINKVGHALHE DP++K F+ S KF
Sbjct: 61  HTTDNYFFESAEKISFFFEEKAFGDDGKLKQPKQLSINKVGHALHELDPLYKDFTYSSKF 120

Query: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
           S L  SLGY+RP+ +QSMYIFKQPGIGGEVVPHQDNSF+YT+P +CTGLW+ALED+   N
Sbjct: 121 SSLASSLGYRRPVVMQSMYIFKQPGIGGEVVPHQDNSFVYTDPQSCTGLWIALEDSTLVN 180

Query: 181 GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQS 240
           GCLWAIPGSHKNGLVRRF+RGD G+ FDQPSP+Y +KDFV IE+KAGSL+ IHGD+IHQS
Sbjct: 181 GCLWAIPGSHKNGLVRRFIRGDNGITFDQPSPSYEQKDFVSIEMKAGSLIAIHGDLIHQS 240

Query: 241 FENQSPKSRHAYSLHVVDTEGCVWAQDNWIRRKVQPEPLY 281
           FEN S KSRHAYSLHVV+++GC WA+DNWI+R   PEPLY
Sbjct: 241 FENLSSKSRHAYSLHVVESDGCKWAKDNWIQRAKMPEPLY 280

[Close]

BLAST of CsGy5G010020 vs. Swiss-Prot
Match: sp|Q9ZVF6|PAHX_ARATH (Phytanoyl-CoA dioxygenase OS=Arabidopsis thaliana OX=3702 GN=PAHX PE=2 SV=2)

HSP 1 Score: 451.1 bits (1159), Expect = 9.4e-126
Identity = 204/280 (72.86%), Postives = 239/280 (85.36%), Query Frame = 0


Query: 1   MGIVPNLTSDQLQFFHSHGYLVIESFATPDEIHAMRNRMEHLLHGFDCSTSSVFSTVNQQ 60
           MGI  +LT DQL FFHS GYLVIESFA+ DEI  +R RM+ LL+ FDCS SS+FST NQ+
Sbjct: 1   MGITGSLTPDQLDFFHSQGYLVIESFASEDEIRGLRKRMDELLNQFDCSVSSIFSTKNQK 60

Query: 61  QSTDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKF 120
            +TD+YF +SAE ISFFFEEKAFG+DG LKQ K+LSINKVGHALHE DP++K F+ S KF
Sbjct: 61  HTTDNYFFESAEKISFFFEEKAFGDDGKLKQPKQLSINKVGHALHELDPLYKDFTYSSKF 120

Query: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
           S L  SLGY+RP+ +QSMYIFKQPGIGGEVVPHQDNSF+YT+P +CTGLW+ALED+   N
Sbjct: 121 SSLASSLGYRRPVVMQSMYIFKQPGIGGEVVPHQDNSFVYTDPQSCTGLWIALEDSTLVN 180

Query: 181 GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQS 240
           GCLWAIPGSHKNGLVRRF+RGD G+ FDQPSP+Y +KDFV IE+KAGSL+ IHGD+IHQS
Sbjct: 181 GCLWAIPGSHKNGLVRRFIRGDNGITFDQPSPSYEQKDFVSIEMKAGSLIAIHGDLIHQS 240

Query: 241 FENQSPKSRHAYSLHVVDTEGCVWAQDNWIRRKVQPEPLY 281
           FEN S KSRHAYSLHVV+++GC WA+DNWI+R   PEPLY
Sbjct: 241 FENLSSKSRHAYSLHVVESDGCKWAKDNWIQRAKMPEPLY 280

[Close]

BLAST of CsGy5G010020 vs. Swiss-Prot
Match: sp|Q10E49|PAHX1_ORYSJ (Phytanoyl-CoA dioxygenase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0708100 PE=2 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 5.3e-113
Identity = 189/277 (68.23%), Postives = 226/277 (81.59%), Query Frame = 0


Query: 6   NLTSDQLQFFHSHGYLVIESFATPDEIHAMRNRMEHLLHGFDCSTSSVFSTVNQQQSTDD 65
           +LT +QL+FF ++GYLV+ SF++ +E+ AMR+RM  L+ GFD     VFST + +Q  +D
Sbjct: 6   SLTDEQLRFFDANGYLVLGSFSSAEEVRAMRDRMAELVDGFD-GAGDVFSTKDHRQVKND 65

Query: 66  YFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKFSGLLL 125
           +F +SAENISFFFEEKAFG+DG LKQ KELSINKVGHALHE DPVFK FS     S L  
Sbjct: 66  FFFKSAENISFFFEEKAFGDDGCLKQAKELSINKVGHALHELDPVFKKFSFGANVSSLFS 125

Query: 126 SLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTNGCLWA 185
           SL YKRP  IQSMYIFKQPGIGGEVVPHQDN+FLYT+P +CTGLWLALEDA  TNGCLWA
Sbjct: 126 SLRYKRPAVIQSMYIFKQPGIGGEVVPHQDNTFLYTDPPSCTGLWLALEDATKTNGCLWA 185

Query: 186 IPGSHKNGLVRRFLRGDKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQSFENQS 245
           IPGSHKNGL RR +R +   +FD PSPTY+ K+FVP+EVK+G LVVIHGD+IHQSFEN S
Sbjct: 186 IPGSHKNGLKRRMIRDEIDTHFDHPSPTYDLKEFVPLEVKSGDLVVIHGDLIHQSFENLS 245

Query: 246 PKSRHAYSLHVVDTEGCVWAQDNWIRRKVQPEPLYES 283
           P SRHA SLHV+DTEGC W++ NW++RK+ P+PLYE+
Sbjct: 246 PVSRHALSLHVIDTEGCEWSKQNWLQRKIPPQPLYEN 281

[Close]

BLAST of CsGy5G010020 vs. Swiss-Prot
Match: sp|Q65WW7|PAHX2_ORYSJ (Phytanoyl-CoA dioxygenase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0473900 PE=2 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 1.0e-111
Identity = 188/277 (67.87%), Postives = 223/277 (80.51%), Query Frame = 0


Query: 6   NLTSDQLQFFHSHGYLVIESFATPDEIHAMRNRMEHLLHGFDCSTSSVFSTVNQQQSTDD 65
           +LT  QL FF ++GYLV+ SF++ +E+ AMR+RM  L+ GFD     VFST + +Q  +D
Sbjct: 6   SLTDKQLHFFDANGYLVLGSFSSAEEVKAMRDRMAVLIDGFD-GAGDVFSTKDHRQVKND 65

Query: 66  YFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKFSGLLL 125
           +F +SAENISFFFEEKAFG+DG LKQ KELSINKVGHALHE DPVFK FS  E  S L  
Sbjct: 66  FFFKSAENISFFFEEKAFGDDGCLKQAKELSINKVGHALHELDPVFKKFSFGENVSSLFS 125

Query: 126 SLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTNGCLWA 185
           SL YKRP  IQSMYIFKQPGIGGEVVPHQDN+FLYT P +CTGLWLALEDA  TNGCLWA
Sbjct: 126 SLRYKRPAVIQSMYIFKQPGIGGEVVPHQDNTFLYTNPPSCTGLWLALEDATKTNGCLWA 185

Query: 186 IPGSHKNGLVRRFLRGDKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQSFENQS 245
           IPGSHKNGL RR +R +   +FD PSPTY+ K+FVP+EVK+G LVVIHGD++HQSFEN S
Sbjct: 186 IPGSHKNGLKRRMIRDENDTHFDHPSPTYDLKEFVPLEVKSGDLVVIHGDLVHQSFENLS 245

Query: 246 PKSRHAYSLHVVDTEGCVWAQDNWIRRKVQPEPLYES 283
             SRHA SLHV+DTEGC W++ NW++RK+ P+PLYE+
Sbjct: 246 LVSRHALSLHVIDTEGCEWSKQNWLQRKIPPQPLYEN 281

[Close]

BLAST of CsGy5G010020 vs. Swiss-Prot
Match: sp|Q0IIB1|PHYD1_BOVIN (Phytanoyl-CoA dioxygenase domain-containing protein 1 OS=Bos taurus OX=9913 GN=PHYHD1 PE=2 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 1.3e-66
Identity = 132/285 (46.32%), Postives = 172/285 (60.35%), Query Frame = 0


Query: 7   LTSDQLQFFHSHGYLVIESFATPDEIHAMRNRMEHLLHGFD----CSTSSVFSTVNQQ-- 66
           L+  QLQ F   G+LV+E F + DE  AM+ R++ ++   D    C T   FST  ++  
Sbjct: 4   LSPSQLQKFQEDGFLVLEGFLSADECEAMQRRIDEIVAKMDVPLHCRTE--FSTQEEEQL 63

Query: 67  --QSTDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSE 126
             Q + DYFL S + I FFFE+  F + GN     E SINK+GHALH  DP+F+  + S 
Sbjct: 64  RAQGSTDYFLSSGDKIRFFFEKGVFDKQGNFLVPPEKSINKIGHALHALDPIFRCVTHSH 123

Query: 127 KFSGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPT-TCTGLWLALEDAN 186
           K   L  SLG + P+ +QSMYIFKQP  GGEV PHQD SFLYTEP     GLW+ALEDA 
Sbjct: 124 KVQALARSLGLQMPVVVQSMYIFKQPHFGGEVAPHQDASFLYTEPLGRVLGLWIALEDAM 183

Query: 187 TTNGCLWAIPGSHKNGLVRRFLR----GDKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIH 246
             NGCLW IPGSH  G+ RR +R       G  F    P  +   FVP  V  G+LV+IH
Sbjct: 184 LENGCLWFIPGSHTGGVSRRMVRTPAGSVPGTSFLGSEPIRDNSLFVPTPVLRGALVLIH 243

Query: 247 GDVIHQSFENQSPKSRHAYSLHVVDTEGCVWAQDNWIRRKVQPEP 279
           G+V+H+S +N S +SR AY+ H+++  G +W+ DNW+    QP P
Sbjct: 244 GEVVHKSEQNLSDRSRQAYTFHLMEAAGTIWSPDNWL----QPTP 282

[Close]

BLAST of CsGy5G010020 vs. Swiss-Prot
Match: sp|Q5U3U0|PHYD1_DANRE (Phytanoyl-CoA dioxygenase domain-containing protein 1 OS=Danio rerio OX=7955 GN=phyhd1 PE=2 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 1.3e-66
Identity = 125/278 (44.96%), Postives = 169/278 (60.79%), Query Frame = 0


Query: 7   LTSDQLQFFHSHGYLVIESFATPDEIHAMRNRMEHLLHGFD----CSTSSVFSTVNQQ-- 66
           LT   +Q F   GYLV+E   +P+E  A+R RM  ++   D    C T   FST + +  
Sbjct: 4   LTDQDVQKFRDEGYLVLEGLLSPEECDALRRRMSEIIESMDVPEHCRTQ--FSTDHDEQL 63

Query: 67  --QSTDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSE 126
             Q   DYF+ S + I FFFE+  F + G     KE S+NK+GHALH ++P+FK  + S 
Sbjct: 64  KTQGNADYFITSGDKIRFFFEKGVFDDKGEFVVPKEQSLNKIGHALHAYEPLFKRVTHSP 123

Query: 127 KFSGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPT-TCTGLWLALEDAN 186
           K   +   L    P+ +QSMYIFKQPGIGGEV PHQD +FLYT+P     G+W+ALEDA 
Sbjct: 124 KVQNICKKLELINPVILQSMYIFKQPGIGGEVTPHQDATFLYTQPLGRVMGVWVALEDAM 183

Query: 187 TTNGCLWAIPGSHKNGLVRRFLRGDKGVY----FDQPSPTYNKKDFVPIEVKAGSLVVIH 246
             NGCLW IPGSH +G+ RR +R  KG +    F      Y+ K FVP  VK G  V+IH
Sbjct: 184 QENGCLWFIPGSHNDGITRRMVRTPKGTFPLTDFIGREKDYDDKLFVPAPVKKGGAVLIH 243

Query: 247 GDVIHQSFENQSPKSRHAYSLHVVDTEGCVWAQDNWIR 272
           G+V+H+S  N S  SRH Y+ H++++E  VW+ +NW++
Sbjct: 244 GEVVHRSAANTSDASRHVYTFHIMESENTVWSPENWLQ 279

[Close]

BLAST of CsGy5G010020 vs. TrEMBL
Match: tr|A0A1S3CNE4|A0A1S3CNE4_CUCME (phytanoyl-CoA dioxygenase isoform X3 OS=Cucumis melo OX=3656 GN=LOC103502875 PE=4 SV=1)

HSP 1 Score: 571.2 bits (1471), Expect = 1.3e-159
Identity = 272/282 (96.45%), Postives = 276/282 (97.87%), Query Frame = 0


Query: 1   MGIVPNLTSDQLQFFHSHGYLVIESFATPDEIHAMRNRMEHLLHGFDCSTSSVFSTVNQQ 60
           MGIVPNL SDQLQFFHSHGYLVIESFATPDE+HAMRNRME LLHGFDCSTSSVFSTVNQQ
Sbjct: 1   MGIVPNLNSDQLQFFHSHGYLVIESFATPDEVHAMRNRMELLLHGFDCSTSSVFSTVNQQ 60

Query: 61  QSTDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKF 120
            STDDYFLQSAENISFFFEEKAFGEDGNLKQ K+LSINKVGHALHE DPVFKSFSDSEKF
Sbjct: 61  LSTDDYFLQSAENISFFFEEKAFGEDGNLKQGKKLSINKVGHALHELDPVFKSFSDSEKF 120

Query: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
           SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN
Sbjct: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180

Query: 181 GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQS 240
           GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTY+KKDFVPIEVKAGSLVVIHGDVIHQS
Sbjct: 181 GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYDKKDFVPIEVKAGSLVVIHGDVIHQS 240

Query: 241 FENQSPKSRHAYSLHVVDTEGCVWAQDNWIRRKVQPEPLYES 283
           FENQSPKSRHAYSLHVVDTEGCVWAQDNWIRRKVQ EPLYE+
Sbjct: 241 FENQSPKSRHAYSLHVVDTEGCVWAQDNWIRRKVQLEPLYET 282

[Close]

BLAST of CsGy5G010020 vs. TrEMBL
Match: tr|A0A0A0KPM7|A0A0A0KPM7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G289600 PE=4 SV=1)

HSP 1 Score: 567.0 bits (1460), Expect = 2.4e-158
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 1   MGIVPNLTSDQLQFFHSHGYLVIESFATPDEIHAMRNRMEHLLHGFDCSTSSVFSTVNQQ 60
           MGIVPNLTSDQLQFFHSHGYLVIESFATPDEIHAMRNRMEHLLHGFDCSTSSVFSTVNQQ
Sbjct: 1   MGIVPNLTSDQLQFFHSHGYLVIESFATPDEIHAMRNRMEHLLHGFDCSTSSVFSTVNQQ 60

Query: 61  QSTDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKF 120
           QSTDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKF
Sbjct: 61  QSTDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKF 120

Query: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
           SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN
Sbjct: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180

Query: 181 GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQS 240
           GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQS
Sbjct: 181 GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQS 240

Query: 241 FENQSPKSRHAYSLHVVDTEGCVWAQDNW 270
           FENQSPKSRHAYSLHVVDTEGCVWAQDNW
Sbjct: 241 FENQSPKSRHAYSLHVVDTEGCVWAQDNW 269

[Close]

BLAST of CsGy5G010020 vs. TrEMBL
Match: tr|A0A1S4E5U1|A0A1S4E5U1_CUCME (phytanoyl-CoA dioxygenase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502875 PE=4 SV=1)

HSP 1 Score: 545.4 bits (1404), Expect = 7.4e-152
Identity = 260/270 (96.30%), Postives = 264/270 (97.78%), Query Frame = 0


Query: 1   MGIVPNLTSDQLQFFHSHGYLVIESFATPDEIHAMRNRMEHLLHGFDCSTSSVFSTVNQQ 60
           MGIVPNL SDQLQFFHSHGYLVIESFATPDE+HAMRNRME LLHGFDCSTSSVFSTVNQQ
Sbjct: 1   MGIVPNLNSDQLQFFHSHGYLVIESFATPDEVHAMRNRMELLLHGFDCSTSSVFSTVNQQ 60

Query: 61  QSTDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKF 120
            STDDYFLQSAENISFFFEEKAFGEDGNLKQ K+LSINKVGHALHE DPVFKSFSDSEKF
Sbjct: 61  LSTDDYFLQSAENISFFFEEKAFGEDGNLKQGKKLSINKVGHALHELDPVFKSFSDSEKF 120

Query: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
           SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN
Sbjct: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180

Query: 181 GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQS 240
           GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTY+KKDFVPIEVKAGSLVVIHGDVIHQS
Sbjct: 181 GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYDKKDFVPIEVKAGSLVVIHGDVIHQS 240

Query: 241 FENQSPKSRHAYSLHVVDTEGCVWAQDNWI 271
           FENQSPKSRHAYSLHVVDTEGCVWAQDN +
Sbjct: 241 FENQSPKSRHAYSLHVVDTEGCVWAQDNCV 270

[Close]

BLAST of CsGy5G010020 vs. TrEMBL
Match: tr|A0A1S4E537|A0A1S4E537_CUCME (phytanoyl-CoA dioxygenase isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502875 PE=4 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 6.9e-150
Identity = 259/270 (95.93%), Postives = 263/270 (97.41%), Query Frame = 0


Query: 1   MGIVPNLTSDQLQFFHSHGYLVIESFATPDEIHAMRNRMEHLLHGFDCSTSSVFSTVNQQ 60
           MGIVPNL SDQLQFFHSHGYLVIESFATPDE+HAMRNRME LLHGFDCSTSSVFSTVN Q
Sbjct: 1   MGIVPNLNSDQLQFFHSHGYLVIESFATPDEVHAMRNRMELLLHGFDCSTSSVFSTVN-Q 60

Query: 61  QSTDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKF 120
            STDDYFLQSAENISFFFEEKAFGEDGNLKQ K+LSINKVGHALHE DPVFKSFSDSEKF
Sbjct: 61  LSTDDYFLQSAENISFFFEEKAFGEDGNLKQGKKLSINKVGHALHELDPVFKSFSDSEKF 120

Query: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
           SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN
Sbjct: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180

Query: 181 GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQS 240
           GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTY+KKDFVPIEVKAGSLVVIHGDVIHQS
Sbjct: 181 GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYDKKDFVPIEVKAGSLVVIHGDVIHQS 240

Query: 241 FENQSPKSRHAYSLHVVDTEGCVWAQDNWI 271
           FENQSPKSRHAYSLHVVDTEGCVWAQDN +
Sbjct: 241 FENQSPKSRHAYSLHVVDTEGCVWAQDNCV 269

[Close]

BLAST of CsGy5G010020 vs. TrEMBL
Match: tr|A0A067L1T9|A0A067L1T9_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_04707 PE=4 SV=1)

HSP 1 Score: 487.6 bits (1254), Expect = 1.8e-134
Identity = 226/282 (80.14%), Postives = 250/282 (88.65%), Query Frame = 0


Query: 1   MGIVPNLTSDQLQFFHSHGYLVIESFATPDEIHAMRNRMEHLLHGFDCSTSSVFSTVNQQ 60
           MGI  +LTSDQLQ F++ GYLVIESFA  +EI A+  RM+ LL  FDCST+S+FST NQQ
Sbjct: 1   MGITRSLTSDQLQSFNAQGYLVIESFANAEEIDALMKRMDQLLDDFDCSTASIFSTKNQQ 60

Query: 61  QSTDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKF 120
           Q TDDYF +SAE ISFFFEEKAFG+DGNL+Q K LSINKVGHALHE DP FKSFS SEKF
Sbjct: 61  QLTDDYFYESAEKISFFFEEKAFGDDGNLQQPKHLSINKVGHALHELDPEFKSFSSSEKF 120

Query: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
             +L SLGYKRP+ IQSMYIFKQPGIGGEVVPHQDNSFLYTEP TCTGLWLALEDA T N
Sbjct: 121 LSMLFSLGYKRPVVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPPTCTGLWLALEDATTVN 180

Query: 181 GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQS 240
           GCLWA+PGSHKNGLVRRF+RG++GVYFD+PSP+Y  KDFVPIEVKAGSLV+IHGD+IHQS
Sbjct: 181 GCLWAVPGSHKNGLVRRFIRGEQGVYFDRPSPSYELKDFVPIEVKAGSLVIIHGDLIHQS 240

Query: 241 FENQSPKSRHAYSLHVVDTEGCVWAQDNWIRRKVQPEPLYES 283
           FEN+SPKSRHAYSLHVVDT+GC WAQDNWIRRKV+PEPLY S
Sbjct: 241 FENRSPKSRHAYSLHVVDTDGCKWAQDNWIRRKVEPEPLYAS 282

The following BLAST results are available for this feature:

BLAST of CsGy5G010020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011655108.1	2.7e-166	100.00	PREDICTED: phytanoyl-CoA dioxygenase isoform X1 [Cucumis sativus]	[more]
XP_011655109.1	2.6e-164	99.65	PREDICTED: phytanoyl-CoA dioxygenase isoform X2 [Cucumis sativus]	[more]
XP_008465221.1	1.9e-159	96.45	PREDICTED: phytanoyl-CoA dioxygenase isoform X3 [Cucumis melo]	[more]
KGN50849.1	3.6e-158	100.00	hypothetical protein Csa_5G289600 [Cucumis sativus]	[more]
XP_016903345.1	1.1e-151	96.30	PREDICTED: phytanoyl-CoA dioxygenase isoform X1 [Cucumis melo]	[more]

BLAST of CsGy5G010020 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G01490.1	5.2e-127	72.86	phytanoyl-CoA dioxygenase (PhyH) family protein	[more]

BLAST of CsGy5G010020 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9ZVF6\|PAHX_ARATH	9.4e-126	72.86	Phytanoyl-CoA dioxygenase OS=Arabidopsis thaliana OX=3702 GN=PAHX PE=2 SV=2	[more]
sp\|Q10E49\|PAHX1_ORYSJ	5.3e-113	68.23	Phytanoyl-CoA dioxygenase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g070...	[more]
sp\|Q65WW7\|PAHX2_ORYSJ	1.0e-111	67.87	Phytanoyl-CoA dioxygenase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g047...	[more]
sp\|Q0IIB1\|PHYD1_BOVIN	1.3e-66	46.32	Phytanoyl-CoA dioxygenase domain-containing protein 1 OS=Bos taurus OX=9913 GN=P...	[more]
sp\|Q5U3U0\|PHYD1_DANRE	1.3e-66	44.96	Phytanoyl-CoA dioxygenase domain-containing protein 1 OS=Danio rerio OX=7955 GN=...	[more]

BLAST of CsGy5G010020 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CNE4\|A0A1S3CNE4_CUCME	1.3e-159	96.45	phytanoyl-CoA dioxygenase isoform X3 OS=Cucumis melo OX=3656 GN=LOC103502875 PE=...	[more]
tr\|A0A0A0KPM7\|A0A0A0KPM7_CUCSA	2.4e-158	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G289600 PE=4 SV=1	[more]
tr\|A0A1S4E5U1\|A0A1S4E5U1_CUCME	7.4e-152	96.30	phytanoyl-CoA dioxygenase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502875 PE=...	[more]
tr\|A0A1S4E537\|A0A1S4E537_CUCME	6.9e-150	95.93	phytanoyl-CoA dioxygenase isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502875 PE=...	[more]
tr\|A0A067L1T9\|A0A067L1T9_JATCU	1.8e-134	80.14	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_04707 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008775	Phytyl_CoA_dOase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0048244	phytanoyl-CoA dioxygenase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G010020.1	CsGy5G010020.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008775	Phytanoyl-CoA dioxygenase	PFAM	PF05721	PhyH	coord: 15..251 e-value: 3.1E-63 score: 213.7
None	No IPR available	GENE3D	G3DSA:2.60.120.620		coord: 5..280 e-value: 4.8E-106 score: 356.0
None	No IPR available	PANTHER	PTHR20883:SF15	PHYTANOYL-COA DIOXYGENASE DOMAIN-CONTAINING PROTEIN 1	coord: 7..276
None	No IPR available	PANTHER	PTHR20883	PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1	coord: 7..276
None	No IPR available	SUPERFAMILY	SSF51197	Clavaminate synthase-like	coord: 7..273

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy5G010020	Cla016881	Watermelon (97103) v1	cgybwmB410
CsGy5G010020	Csa5G289600	Cucumber (Chinese Long) v2	cgybcuB232
CsGy5G010020	ClCG11G001200	Watermelon (Charleston Gray)	cgybwcgB329
CsGy5G010020	CSPI05G12480	Wild cucumber (PI 183967)	cgybcpiB235
CsGy5G010020	Lsi11G001320	Bottle gourd (USVL1VR-Ls)	cgyblsiB307
CsGy5G010020	MELO3C026795.2	Melon (DHL92) v3.6.1	cgybmedB319
CsGy5G010020	CsaV3_5G013260	Cucumber (Chinese Long) v3	cgybcucB232
CsGy5G010020	Cla97C11G207600	Watermelon (97103) v2	cgybwmbB342
CsGy5G010020	Bhi07G000114	Wax gourd	cgybwgoB491

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy5G010020	Cucurbita maxima (Rimu)	cgybcmaB664
CsGy5G010020	Cucurbita moschata (Rifu)	cgybcmoB641
CsGy5G010020	Cucurbita pepo (Zucchini)	cgybcpeB642
CsGy5G010020	Silver-seed gourd	carcgybB0191