CsGy5G006130 (gene) Cucumber (Gy14) v2

NameCsGy5G006130
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr5 : 4098961 .. 4100176 (-)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGATATTCACTAATTAAAACATAAATGTGATCACTATTACTCACACTAGAAGCTGAATCTTCTGCCACAGTTTTTTCTTAGTCTAGAGGCTCAAGATACAAAAATTCAGTTTTATGTGTGGACTACTCCCAGGATAACCAATATACTGAAGAGACATCTTTTTTGTAACAGCTCCATAAGATGAGTGTTAGCCAGCCAGAGGCAAGGCCAATTAATCTATATGTTGACGCAAGATTTTGATCAGACACGTGTAGTTAAAGGGCTGACCAACCTGCAAAAGAGAAGCTCACACCAGTGTGGTGCTATGCCCATTATGCTTTGATGCTTAAGTCTGCTTAGATTTTATTAGTGTCAAGTAGTGGTAGGTGGGATGAATCCTTTCTATTTAGATCTTTCTTCCCTCGCATATTCTTCAGTGCCATACAAGGAGTCAACAGGAAGGGGAGGAGGTCACATGCCTCAGCACAGTTCTTTCTAAGCTTGATAAGCTGTCCTTTTTAGAGATTGGTCTACTCCTCAAAAGGCGTTGTAGGGAAATCCACTGCTTGTCAGTCCAGGTGTCACTCCCAGAAGGCCCCACATGGCAATGGGCCCATGACAAGTACGACTGACTTCACCCATATGTCATAACATTATCCATTGTTTGTTTGCCACAAACTGGAAGAGTAGCTTTAGAGGTGTTTAGTTTGTCTAGAAGAGTTCCTTATGCTATGTTGCTTGCCTCTTATTCCTTCTTCCAAGAAAAAGCCAAAGATCATCTGGTCGAGTGCAGTCTTTACTCTTCCCGAAGATAAATAGATCTACTTATAAAGGAGTGAAAAAGGATGTAAACACAGTTTTGAAAAGGGTTTTTTCACTACATCTCTTGGATCTTTCATATAAAGAGTTTGTTGCCGTCCTTTGTTTTTTTAGCTTGATCTTGTTGGTCACCCCAGCTGCAGTTTCCGGGTCGCCAACTGTGACTTATAACTATACTTCCTTATCTGGGTGAAAGATTTATCTTTTAGCCTTTGAAGTATAAACAACCAGATAGGTGCATTATTCATAAGTAATTCCACACATACATATATATATATATATATATAAAGAAAAAAAAAAAAAAACTTATTTTCTTCTTGAAACCTGACAAGTTGTTAATCTTTGTATGTATAAGGCACTCTTATTGACTACAGAAAAGTTCAAAAGGAATGGAGGTTTAGATTGATCAACTAA

mRNA sequence

ATGCTCCATAAGATGAGTATCTTTCTTCCCTCGCATATTCTTCAGTGCCATACAAGGAGTCAACAGGAAGGGGAGGAGGTCACATGCCTCAGCACAGTTCTTTCTAAGCTTGATAAGCTGTCCTTTTTAGAGATTGGTCTACTCCTCAAAAGGCGTTGTAGGGAAATCCACTGCTTGTCAGTCCAGGTGTCACTCCCAGAAGGCCCCACATGGCAATGGGCCCATGACAACTTGATCTTGTTGGTCACCCCAGCTGCAGTTTCCGGGTCGCCAACTGTGACTTATAACTATACTTCCTTATCTGGAAAAGTTCAAAAGGAATGGAGGTTTAGATTGATCAACTAA

Coding sequence (CDS)

ATGCTCCATAAGATGAGTATCTTTCTTCCCTCGCATATTCTTCAGTGCCATACAAGGAGTCAACAGGAAGGGGAGGAGGTCACATGCCTCAGCACAGTTCTTTCTAAGCTTGATAAGCTGTCCTTTTTAGAGATTGGTCTACTCCTCAAAAGGCGTTGTAGGGAAATCCACTGCTTGTCAGTCCAGGTGTCACTCCCAGAAGGCCCCACATGGCAATGGGCCCATGACAACTTGATCTTGTTGGTCACCCCAGCTGCAGTTTCCGGGTCGCCAACTGTGACTTATAACTATACTTCCTTATCTGGAAAAGTTCAAAAGGAATGGAGGTTTAGATTGATCAACTAA

Protein sequence

MLHKMSIFLPSHILQCHTRSQQEGEEVTCLSTVLSKLDKLSFLEIGLLLKRRCREIHCLSVQVSLPEGPTWQWAHDNLILLVTPAAVSGSPTVTYNYTSLSGKVQKEWRFRLIN
BLAST of CsGy5G006130 vs. NCBI nr
Match: KGN50458.1 (hypothetical protein Csa_5G175820 [Cucumis sativus])

HSP 1 Score: 134.0 bits (336), Expect = 3.1e-28
Identity = 63/64 (98.44%), Postives = 63/64 (98.44%), Query Frame = 0

Query: 13  ILQCHTRSQQEGEEVTCLSTVLSKLDKLSFLEIGLLLKRRCREIHCLSVQVSLPEGPTWQ 72
           I QCHTRSQQEGEEVTCLSTVLSKLDKLSFLEIGLLLKRRCREIHCLSVQVSLPEGPTWQ
Sbjct: 351 INQCHTRSQQEGEEVTCLSTVLSKLDKLSFLEIGLLLKRRCREIHCLSVQVSLPEGPTWQ 410

Query: 73  WAHD 77
           WAHD
Sbjct: 411 WAHD 414

BLAST of CsGy5G006130 vs. TrEMBL
Match: tr|A0A0A0KLI7|A0A0A0KLI7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G175820 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.1e-28
Identity = 63/64 (98.44%), Postives = 63/64 (98.44%), Query Frame = 0

Query: 13  ILQCHTRSQQEGEEVTCLSTVLSKLDKLSFLEIGLLLKRRCREIHCLSVQVSLPEGPTWQ 72
           I QCHTRSQQEGEEVTCLSTVLSKLDKLSFLEIGLLLKRRCREIHCLSVQVSLPEGPTWQ
Sbjct: 351 INQCHTRSQQEGEEVTCLSTVLSKLDKLSFLEIGLLLKRRCREIHCLSVQVSLPEGPTWQ 410

Query: 73  WAHD 77
           WAHD
Sbjct: 411 WAHD 414

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN50458.13.1e-2898.44hypothetical protein Csa_5G175820 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0KLI7|A0A0A0KLI7_CUCSA2.1e-2898.44Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G175820 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009690 cytokinin metabolic process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005575 cellular_component
molecular_function GO:0019139 cytokinin dehydrogenase activity
molecular_function GO:0050660 flavin adenine dinucleotide binding
molecular_function GO:0016614 oxidoreductase activity, acting on CH-OH group of donors

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G006130.1CsGy5G006130.1mRNA