CsGy5G005370 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy5G005370
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	probable rRNA-processing protein EBP2 homolog
Location	Chr5 : 3455567 .. 3458042 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTACAAAGAAAAAAAGAAAAAACAAAGTTTTTAGGTGAAAAAAATTGAAACTATTTACTAAATATAAATATATTAAAAAGCTAAATTAAAGATAATTTATTAATTTTGTAAATATATATATTTATTTATTTGGCAGTTCACTCCCAATCGTCCGTACGGAGAAACTCCATCTTTTTATTTTTATTTTTGTGTGTTTTAAAATTGTTTTTAACATCTCTTTCTTCAATTCTCTAAAACCCTATTTCTTCCGCCATAAGCCGTCTCAGCCGCTGCACTCTCACTTGCCGTACTCCCAACCTTCCGACGAAATCTCCGCCGGCCATCTCTCTCTCACACTCTCGCCTTCCCGACTGTGACCACATACCAAGGTTGGTTTTATTTTCTCTTTTCTTTCCCTCGGTTATGGAGAATATAGAACAATTTTTTTTGTTTGTTGATTTCTTCCTCAATTAATGATCAACTAGCCTGAAATTTAGAATGCATACTTCACATATATCATTCGCATTTGAATATAATGGTTAAAATTATGAAGACGGCAGAAAAAAGTTGAAAAGACTGGAACTTATGTTATCAAATGAAAAAAAAAAAAAAAACCCTCACAGTAGAAAAATAAACTTGGGTTTTGGTATGATTGGATGGTTTCGAGTTTTCTTGATTATAGGGTGCACATTAACAGGCTATGTGTAGATGAAAAAGATAAATTATGGTGTTTTATTTGAATCAGATTTTTGTGCTTTTCGTGTCTTGCTTGACTAGGGTTGCTATATTAGTGCTCGTTTTAAAACACTGATTATCAGGTAATTTTTTGTTGTTCTTGTAGCAAGTTTATGCTATTGTACTCTTATAGGTCTTGTAGCAAGTGTTACCAGTGAGGATGTTGTTAGTTGTTTGGTATTTTATATGGCTAACTATGTGTCTTTGCAAACTTTGAATCACTCACCAAAATAGTGCCTCCCTTTCTCCTTCCCCACCATTTCTATTTACAATCAACTAACATAGCAACATCGTTAGTTAATTAATAATATGTCCCGGCAATACTCTAATAGTGTTCCTATCAAATGATTGTCAACTATCGTGTTCCTTGATTATGAACATTCGGCTTTGTCACGTATTTTTGGAATAGAATTATAAGTTGAGAGGTTTAACCTTAACAATGGTTATCTTTATGGATAGGTTTTACATGGGTGTATCAATTAAAGATGCTAGCTTCTTAAACGAGGATACAGTGGAAGATGGTGATTTTAGTAGCGAGGATTCAGAATTTGAATCAGAATCTGAGTCCGGGTCTGGGTCTGAGGAGGAGGAGGAAGAGGATGTGGAACTATCTGAACCATCAAAGAATGCAATATATAATGCTGATGGTCTTCTTGACAAGCTTGGAGATATTAGCTGGCCTGAAAACGTGGAATGGATACACAAGCTAACTTTTGATATTGAGCAAGAAAAAGAGGTGGATGTGAATGATGATCTAACTAGAGAGCTTGCATTCTATACACAGGCTTTGCAGGGTACAAGAATGGCCCTTGAGAAGTTCCAATCTTTAGGACTTCCATTTCTCAGGCCTTCAGACTATTACGCAGAGATGGTGAAGACAGATACTCACATGCAAAAAGTGAAAGGTCGGCTGCTATCCGAACAGAGAAAGATGGAGGAGGCTGAGGAAAGAAGGAAGGCAAGAGAAGCAAAGAAATTAGCTAAAGAGATTCAAGCTCAGAAGCAGAAGGAGAGGGCTAAGCAGAAGAAGGAGGAGATTGAATCTGTTAAGAAATGGAGGAAGCAGAGGCAAAAGAATAATTTTGCTGGAGGTGATAAAGGTGGTGATATGGACTTTTCCTTTGAAGATGGAAAGACATTTGAGAGGTCTGGAGGTAAGAAGAGGCCAGGGGTGTCTCCTGGCGATCGTTCAGGAGGGAAGGCAAGACATGGAGGTGGAGGAGGAGGAGGAGGAGGAGGAGGAAAAGGGAAAATTCCGAAGAAAAAGAGAGATTTTAGAGATTCTAAGTTTGGATTCGGCGGGAGGAAAAGTTTGAAAAAGCAGAACACAGCTGATACAACTAATGATATTAGGGGATTCAACAATGGCAGTTTATCAAGCAACAAAAGAAGGAAGAAGTCAGATTAATGAACTAATTTAGTTTCAAGTTTAGGGAGATGAGTTGGGATTGTGGTCAACTTTATAATTTTGCCTCTATGTTCTTTTGAAAACTTCATTCTGTATTGTTGTCAGCCTTTGTGATAATCCTTGAAGATGAAAATTATAGTTTTGTATTCCTTTTTTAAAAAAATCCTAATTTTGATAGTTATTGTTATTGTGCCATTATGGTTTTAAATCTTAGAAATCTTGATGAGAGTTGATGTTCTATACATCAAAGTTTTTGCAAATCAAGTGTGTAGATTGTACCTATTTAGTCCTTAATTTTTCTTTGATCTTTAAGTGTAGTAAACTAATTAATTGTAGCAGTTTATTAGGTGG

mRNA sequence

ATGTTACAAAGAAAAAAAGAAAAAACAAACCGCTGCACTCTCACTTGCCGTACTCCCAACCTTCCGACGAAATCTCCGCCGGCCATCTCTCTCTCACACTCTCGCCTTCCCGACTGTGACCACATACCAAGGTTTTACATGGGTGTATCAATTAAAGATGCTAGCTTCTTAAACGAGGATACAGTGGAAGATGGTGATTTTAGTAGCGAGGATTCAGAATTTGAATCAGAATCTGAGTCCGGGTCTGGGTCTGAGGAGGAGGAGGAAGAGGATGTGGAACTATCTGAACCATCAAAGAATGCAATATATAATGCTGATGGTCTTCTTGACAAGCTTGGAGATATTAGCTGGCCTGAAAACGTGGAATGGATACACAAGCTAACTTTTGATATTGAGCAAGAAAAAGAGGTGGATGTGAATGATGATCTAACTAGAGAGCTTGCATTCTATACACAGGCTTTGCAGGGTACAAGAATGGCCCTTGAGAAGTTCCAATCTTTAGGACTTCCATTTCTCAGGCCTTCAGACTATTACGCAGAGATGGTGAAGACAGATACTCACATGCAAAAAGTGAAAGGTCGGCTGCTATCCGAACAGAGAAAGATGGAGGAGGCTGAGGAAAGAAGGAAGGCAAGAGAAGCAAAGAAATTAGCTAAAGAGATTCAAGCTCAGAAGCAGAAGGAGAGGGCTAAGCAGAAGAAGGAGGAGATTGAATCTGTTAAGAAATGGAGGAAGCAGAGGCAAAAGAATAATTTTGCTGGAGGTGATAAAGGTGGTGATATGGACTTTTCCTTTGAAGATGGAAAGACATTTGAGAGGTCTGGAGGTAAGAAGAGGCCAGGGGTGTCTCCTGGCGATCGTTCAGGAGGGAAGGCAAGACATGGAGGTGGAGGAGGAGGAGGAGGAGGAGGAGGAAAAGGGAAAATTCCGAAGAAAAAGAGAGATTTTAGAGATTCTAAGTTTGGATTCGGCGGGAGGAAAAGTTTGAAAAAGCAGAACACAGCTGATACAACTAATGATATTAGGGGATTCAACAATGGCAGTTTATCAAGCAACAAAAGAAGGAAGAAGTCAGATTAATGAACTAATTTAGTTTCAAGTTTAGGGAGATGAGTTGGGATTGTGGTCAACTTTATAATTTTGCCTCTATGTTCTTTTGAAAACTTCATTCTGTATTGTTGTCAGCCTTTGTGATAATCCTTGAAGATGAAAATTATAGTTTTGTATTCCTTTTTTAAAAAAATCCTAATTTTGATAGTTATTGTTATTGTGCCATTATGGTTTTAAATCTTAGAAATCTTGATGAGAGTTGATGTTCTATACATCAAAGTTTTTGCAAATCAAGTGTGTAGATTGTACCTATTTAGTCCTTAATTTTTCTTTGATCTTTAAGTGTAGTAAACTAATTAATTGTAGCAGTTTATTAGGTGG

Coding sequence (CDS)

ATGTTACAAAGAAAAAAAGAAAAAACAAACCGCTGCACTCTCACTTGCCGTACTCCCAACCTTCCGACGAAATCTCCGCCGGCCATCTCTCTCTCACACTCTCGCCTTCCCGACTGTGACCACATACCAAGGTTTTACATGGGTGTATCAATTAAAGATGCTAGCTTCTTAAACGAGGATACAGTGGAAGATGGTGATTTTAGTAGCGAGGATTCAGAATTTGAATCAGAATCTGAGTCCGGGTCTGGGTCTGAGGAGGAGGAGGAAGAGGATGTGGAACTATCTGAACCATCAAAGAATGCAATATATAATGCTGATGGTCTTCTTGACAAGCTTGGAGATATTAGCTGGCCTGAAAACGTGGAATGGATACACAAGCTAACTTTTGATATTGAGCAAGAAAAAGAGGTGGATGTGAATGATGATCTAACTAGAGAGCTTGCATTCTATACACAGGCTTTGCAGGGTACAAGAATGGCCCTTGAGAAGTTCCAATCTTTAGGACTTCCATTTCTCAGGCCTTCAGACTATTACGCAGAGATGGTGAAGACAGATACTCACATGCAAAAAGTGAAAGGTCGGCTGCTATCCGAACAGAGAAAGATGGAGGAGGCTGAGGAAAGAAGGAAGGCAAGAGAAGCAAAGAAATTAGCTAAAGAGATTCAAGCTCAGAAGCAGAAGGAGAGGGCTAAGCAGAAGAAGGAGGAGATTGAATCTGTTAAGAAATGGAGGAAGCAGAGGCAAAAGAATAATTTTGCTGGAGGTGATAAAGGTGGTGATATGGACTTTTCCTTTGAAGATGGAAAGACATTTGAGAGGTCTGGAGGTAAGAAGAGGCCAGGGGTGTCTCCTGGCGATCGTTCAGGAGGGAAGGCAAGACATGGAGGTGGAGGAGGAGGAGGAGGAGGAGGAGGAAAAGGGAAAATTCCGAAGAAAAAGAGAGATTTTAGAGATTCTAAGTTTGGATTCGGCGGGAGGAAAAGTTTGAAAAAGCAGAACACAGCTGATACAACTAATGATATTAGGGGATTCAACAATGGCAGTTTATCAAGCAACAAAAGAAGGAAGAAGTCAGATTAA

Protein sequence

MLQRKKEKTNRCTLTCRTPNLPTKSPPAISLSHSRLPDCDHIPRFYMGVSIKDASFLNEDTVEDGDFSSEDSEFESESESGSGSEEEEEEDVELSEPSKNAIYNADGLLDKLGDISWPENVEWIHKLTFDIEQEKEVDVNDDLTRELAFYTQALQGTRMALEKFQSLGLPFLRPSDYYAEMVKTDTHMQKVKGRLLSEQRKMEEAEERRKAREAKKLAKEIQAQKQKERAKQKKEEIESVKKWRKQRQKNNFAGGDKGGDMDFSFEDGKTFERSGGKKRPGVSPGDRSGGKARHGGGGGGGGGGGKGKIPKKKRDFRDSKFGFGGRKSLKKQNTADTTNDIRGFNNGSLSSNKRRKKSD

Homology

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BLAST of CsGy5G005370 vs. NCBI nr
Match: XP_004143659.2 (PREDICTED: probable rRNA-processing protein EBP2 homolog [Cucumis sativus] >KGN50375.1 hypothetical protein Csa_5G169110 [Cucumis sativus])

HSP 1 Score: 419.9 bits (1078), Expect = 9.0e-114
Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0


Query: 47  MGVSIKDASFLNEDTVEDGDFSSEXXXXXXXXXXXXXXXXXXXXXXXXSEPSKNAIYNAD 106
           MGVSIKDASFLNEDTVEDGDFSSEXXXXXXXXXXXXXXXXXXXXXXXXSEPSKNAIYNAD
Sbjct: 1   MGVSIKDASFLNEDTVEDGDFSSEXXXXXXXXXXXXXXXXXXXXXXXXSEPSKNAIYNAD 60

Query: 107 GLLDKLGDISWPENVEWIHKLTFDIEQEKEVDVNDDLTRELAFYTQALQGTRMALEKFQS 166
           GLLDKLGDISWPENVEWIHKLTFDIEQEKEVDVNDDLTRELAFYTQALQGTRMALEKFQS
Sbjct: 61  GLLDKLGDISWPENVEWIHKLTFDIEQEKEVDVNDDLTRELAFYTQALQGTRMALEKFQS 120

Query: 167 LGLPFLRPSDYYAEMVKTDTHMQKVKGRLLSEQRKMXXXXXXXXXXXXXXXXXXXXXXXX 226
           LGLPFLRPSDYYAEMVKTDTHMQKVKGRLLSEQRKMXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 LGLPFLRPSDYYAEMVKTDTHMQKVKGRLLSEQRKMXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 227 XXXXXXXXXXXXXXXXXXXXRQKNNFAGGDKGGDMDFSFEDGKTFERSGGKKRPGVSPGD 286
           XXXXXXXXXXXXXXXXXXXXRQKNNFAGGDKGGDMDFSFEDGKTFERSGGKKRPGVSPGD
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXRQKNNFAGGDKGGDMDFSFEDGKTFERSGGKKRPGVSPGD 240

Query: 287 RSGGKAXXXXXXXXXXXXXXXXXPKKKRDFRDSKFGFGGRKSLKKQNTADTTNDIRGFNN 346
           RSGGKAXXXXXXXXXXXXXXXXXPKKKRDFRDSKFGFGGRKSLKKQNTADTTNDIRGFNN
Sbjct: 241 RSGGKAXXXXXXXXXXXXXXXXXPKKKRDFRDSKFGFGGRKSLKKQNTADTTNDIRGFNN 300

Query: 347 GSLSSNKRRKKSD 360
           GSLSSNKRRKKSD
Sbjct: 301 GSLSSNKRRKKSD 313

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BLAST of CsGy5G005370 vs. NCBI nr
Match: XP_008467285.1 (PREDICTED: probable rRNA-processing protein EBP2 homolog [Cucumis melo])

HSP 1 Score: 394.0 bits (1011), Expect = 5.3e-106
Identity = 299/313 (95.53%), Postives = 302/313 (96.49%), Query Frame = 0


Query: 47  MGVSIKDASFLNEDTVEDGDFSSEXXXXXXXXXXXXXXXXXXXXXXXXSEPSKNAIYNAD 106
           MGVSIKDA FLNEDTVED D SS XXXXXXXXXXXXXXXXXXXXXXXXSEPSKNAIYNAD
Sbjct: 1   MGVSIKDADFLNEDTVEDDDLSS-XXXXXXXXXXXXXXXXXXXXXXXXSEPSKNAIYNAD 60

Query: 107 GLLDKLGDISWPENVEWIHKLTFDIEQEKEVDVNDDLTRELAFYTQALQGTRMALEKFQS 166
           GLLDKLGDISWPENVEWIHKLTFDI+QEKEVDVNDDL RELAFYTQALQGTRMALEKFQS
Sbjct: 61  GLLDKLGDISWPENVEWIHKLTFDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQS 120

Query: 167 LGLPFLRPSDYYAEMVKTDTHMQKVKGRLLSEQRKMXXXXXXXXXXXXXXXXXXXXXXXX 226
           LGLPFLRPSDYYAEMVKTDTHMQKVKGRLLSEQRKMXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 LGLPFLRPSDYYAEMVKTDTHMQKVKGRLLSEQRKMXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 227 XXXXXXXXXXXXXXXXXXXXRQKNNFAGGDKGGDMDFSFEDGKTFERSGGKKRPGVSPGD 286
           XXXXXXXXXXXXXXXXXXXXRQKNNFAGGDKGGDMDFSFEDGKTFERSGGKKRPGVSPGD
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXRQKNNFAGGDKGGDMDFSFEDGKTFERSGGKKRPGVSPGD 240

Query: 287 RSGGKAXXXXXXXXXXXXXXXXXPKKKRDFRDSKFGFGGRKSLKKQNTADTTNDIRGFNN 346
           RSGGKA     XXXXXXXXXXXX KKKRDFRDSKFGFGGRKSLKKQNTA+TTNDIRGFNN
Sbjct: 241 RSGGKA-----XXXXXXXXXXXXXKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIRGFNN 300

Query: 347 GSLSSNKRRKKSD 360
           GSLS+NKRRKKSD
Sbjct: 301 GSLSNNKRRKKSD 307

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BLAST of CsGy5G005370 vs. NCBI nr
Match: XP_022981565.1 (probable rRNA-processing protein EBP2 homolog [Cucurbita maxima])

HSP 1 Score: 352.4 bits (903), Expect = 1.8e-93
Identity = 255/312 (81.73%), Postives = 268/312 (85.90%), Query Frame = 0


Query: 47  MGVSIKDASFLNEDTVEDGDFSSEXXXXXXXXXXXXXXXXXXXXXXXXSEPSKNAIYNAD 106
           MGVS KDA FLNEDT+E+ D S+E     XXXXXXXXXXXXXXXXXX SEPSK AIYNAD
Sbjct: 1   MGVSDKDARFLNEDTMENDDLSNE-----XXXXXXXXXXXXXXXXXXLSEPSKTAIYNAD 60

Query: 107 GLLDKLGDISWPENVEWIHKLTFDIEQEKEVDVNDDLTRELAFYTQALQGTRMALEKFQS 166
           GLLDKL DISWP+NVEWIH+L  DI+QEKEVDVNDDL RELAFYTQALQGTRMALEKFQS
Sbjct: 61  GLLDKLEDISWPKNVEWIHRLCLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQS 120

Query: 167 LGLPFLRPSDYYAEMVKTDTHMQKVKGRLLSEQRKMXXXXXXXXXXXXXXXXXXXXXXXX 226
           LGLPFLRPSDYYAEMVKTDTHM KVKGRLL+EQRKM  XXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 LGLPFLRPSDYYAEMVKTDTHMGKVKGRLLAEQRKMEEXXXXXXXXXXXXXXXXXXXXXX 180

Query: 227 XXXXXXXXXXXXXXXXXXXXRQKNNFAGGDKGGDMDFSFEDGKTFERSGGKKRPGVSPGD 286
           XXXXXXXXXXXXXXXXX   RQK+ FAGGDKGG+M+ SFEDGK FERSGGKKRPGVSPGD
Sbjct: 181 XXXXXXXXXXXXXXXXXRKQRQKSGFAGGDKGGEMELSFEDGKAFERSGGKKRPGVSPGD 240

Query: 287 RSGGKAXXXXXXXXXXXXXXXXXPKKKRDFRDSKFGFGGRKSLKKQNTADTTNDIRGFNN 346
           RSGGKA                  KKK+DFRDSKFGFGGRKSLKKQNTA+TTNDIRGFNN
Sbjct: 241 RSGGKARHRNGGKGKNL-------KKKKDFRDSKFGFGGRKSLKKQNTAETTNDIRGFNN 300

Query: 347 GSLSSNKRRKKS 359
            SL SNKRRK+S
Sbjct: 301 DSLLSNKRRKRS 300

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BLAST of CsGy5G005370 vs. NCBI nr
Match: XP_022926294.1 (probable rRNA-processing protein EBP2 homolog [Cucurbita moschata])

HSP 1 Score: 351.3 bits (900), Expect = 3.9e-93
Identity = 260/315 (82.54%), Postives = 272/315 (86.35%), Query Frame = 0


Query: 47  MGVSIKDASFLNEDTVEDGDFSSE---XXXXXXXXXXXXXXXXXXXXXXXXSEPSKNAIY 106
           MGVS KDA FLNEDT+ED D  +E   XXXXXXXXXXXXXXXXXXXXXXXXSEPSK AIY
Sbjct: 1   MGVSDKDARFLNEDTMEDDDLGNEDSXXXXXXXXXXXXXXXXXXXXXXXXXSEPSKTAIY 60

Query: 107 NADGLLDKLGDISWPENVEWIHKLTFDIEQEKEVDVNDDLTRELAFYTQALQGTRMALEK 166
           NADGLLDKL DISWP+NVEWIH+L  DI+QEKEVDVNDDL RELAFYTQALQGTRMALEK
Sbjct: 61  NADGLLDKLEDISWPKNVEWIHRLCLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEK 120

Query: 167 FQSLGLPFLRPSDYYAEMVKTDTHMQKVKGRLLSEQRKMXXXXXXXXXXXXXXXXXXXXX 226
           FQSLGLPFLRPSDYYAEMVKTDTHM KVKGRLL+EQRKM  XXXXXXXXXXXXXXXXXXX
Sbjct: 121 FQSLGLPFLRPSDYYAEMVKTDTHMGKVKGRLLAEQRKMEEXXXXXXXXXXXXXXXXXXX 180

Query: 227 XXXXXXXXXXXXXXXXXXXXXXXRQKNNFAGGDKGGDMDFSFEDGKTFERSGGKKRPGVS 286
           XXXXXXXXXXXXXXXXXXX    RQK+ FAGGDKGGDM+ SFEDGK FERSGGKKRPGVS
Sbjct: 181 XXXXXXXXXXXXXXXXXXXWRKQRQKSGFAGGDKGGDMELSFEDGKAFERSGGKKRPGVS 240

Query: 287 PGDRSGGKAXXXXXXXXXXXXXXXXXPKKKRDFRDSKFGFGGRKSLKKQNTADTTNDIRG 346
           PGDRSGGKA                  KKK+DFRDSKFGFGGRKSLKKQNTA+TTNDIRG
Sbjct: 241 PGDRSGGKARHRDGGKGKNL-------KKKKDFRDSKFGFGGRKSLKKQNTAETTNDIRG 300

Query: 347 FNNGSLSSNKRRKKS 359
           FN+ SL SNKRRK+S
Sbjct: 301 FNSDSLLSNKRRKRS 308

[Close]

BLAST of CsGy5G005370 vs. NCBI nr
Match: XP_023522121.1 (probable rRNA-processing protein EBP2 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 343.6 bits (880), Expect = 8.2e-91
Identity = 255/312 (81.73%), Postives = 267/312 (85.58%), Query Frame = 0


Query: 47  MGVSIKDASFLNEDTVEDGDFSSEXXXXXXXXXXXXXXXXXXXXXXXXSEPSKNAIYNAD 106
           MGVS KD  FLNEDT+ED D S+   XXXXXXXXXXXXXXXXXXXXXXSEPSK AIYNAD
Sbjct: 1   MGVSDKDVKFLNEDTMEDDDLSN---XXXXXXXXXXXXXXXXXXXXXXSEPSKTAIYNAD 60

Query: 107 GLLDKLGDISWPENVEWIHKLTFDIEQEKEVDVNDDLTRELAFYTQALQGTRMALEKFQS 166
           GLLDKL DISWP+NVEWIH+L  DI+QEKEVDVNDDL RELAFYTQA QGTRMALEKFQS
Sbjct: 61  GLLDKLEDISWPKNVEWIHRLCLDIDQEKEVDVNDDLARELAFYTQAFQGTRMALEKFQS 120

Query: 167 LGLPFLRPSDYYAEMVKTDTHMQKVKGRLLSEQRKMXXXXXXXXXXXXXXXXXXXXXXXX 226
           LGLPFLRPSDYYAEMVKTDTHM KVKGRLL+EQRKM  XXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 LGLPFLRPSDYYAEMVKTDTHMGKVKGRLLAEQRKMEEXXXXXXXXXXXXXXXXXXXXXX 180

Query: 227 XXXXXXXXXXXXXXXXXXXXRQKNNFAGGDKGGDMDFSFEDGKTFERSGGKKRPGVSPGD 286
           XXXXXXXXXXXXXXXXX   RQK+ FAGGDKGG+M+ SFEDGK FERSGGKKRPGVSPGD
Sbjct: 181 XXXXXXXXXXXXXXXXXRKQRQKSGFAGGDKGGEMELSFEDGKAFERSGGKKRPGVSPGD 240

Query: 287 RSGGKAXXXXXXXXXXXXXXXXXPKKKRDFRDSKFGFGGRKSLKKQNTADTTNDIRGFNN 346
            SGG A                  KKK+DFRDSKFGFGGRKSLKKQNTA+TTNDIRGFNN
Sbjct: 241 CSGGMARHRDGGKGKNL-------KKKKDFRDSKFGFGGRKSLKKQNTAETTNDIRGFNN 300

Query: 347 GSLSSNKRRKKS 359
            SL SNKRRK+S
Sbjct: 301 HSLLSNKRRKRS 302

[Close]

BLAST of CsGy5G005370 vs. TAIR10
Match: AT3G22660.1 (rRNA processing protein-related)

HSP 1 Score: 232.3 bits (591), Expect = 4.8e-61
Identity = 173/264 (65.53%), Postives = 202/264 (76.52%), Query Frame = 0


Query: 95  SEPSKNAIYNADGLLDKLGDISWPENVEWIHKLTFDIEQEKEVDVNDDLTRELAFYTQAL 154
           +EP+K AIYN DGLLDKL DISWPE+V+W HKLT +I+Q   VDVNDDL RE AFYTQAL
Sbjct: 43  AEPTKTAIYNRDGLLDKLQDISWPEDVDWTHKLTVEIDQGGAVDVNDDLARETAFYTQAL 102

Query: 155 QGTRMALEKFQSLGLPFLRPSDYYAEMVKTDTHMQKVKGRLLSEQRKMXXXXXXXXXXXX 214
           +GTR A  K   +G+ FLRP++YYAEMVK+D HM+KVK RLL E++++ XXXXXXXXXXX
Sbjct: 103 EGTREAFGKLNEMGVNFLRPANYYAEMVKSDVHMEKVKSRLLHEKKQIEXXXXXXXXXXX 162

Query: 215 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQKNNFAGGDKGGDMDFSFEDGKTFERS 274
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  ++ F+  DK G+ +  FE GK+F+R 
Sbjct: 163 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSGFS--DKAGEPELDFESGKSFQRG 222

Query: 275 GGKKRPGVSPGDRSGGKAXXXXXXXXXXXXXXXXXPKKKRDFRDSKFGFGGRKSLKKQNT 334
           GGKKRPGVSPGDRSGGK                    KKR+FRDSKFG GGRK L KQNT
Sbjct: 223 GGKKRPGVSPGDRSGGKGRPTSRMG-----------NKKREFRDSKFGHGGRKGLSKQNT 282

Query: 335 ADTTNDIR-GFNNGSLSSNKRRKK 358
           A+TTND + GF  G  S NKR+K+
Sbjct: 283 AETTNDFKGGFRGGKASGNKRQKR 293

[Close]

BLAST of CsGy5G005370 vs. Swiss-Prot
Match: sp|Q9LUJ5|EBP2_ARATH (Probable rRNA-processing protein EBP2 homolog OS=Arabidopsis thaliana OX=3702 GN=EBP2 PE=1 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 8.7e-60
Identity = 173/264 (65.53%), Postives = 202/264 (76.52%), Query Frame = 0


Query: 95  SEPSKNAIYNADGLLDKLGDISWPENVEWIHKLTFDIEQEKEVDVNDDLTRELAFYTQAL 154
           +EP+K AIYN DGLLDKL DISWPE+V+W HKLT +I+Q   VDVNDDL RE AFYTQAL
Sbjct: 43  AEPTKTAIYNRDGLLDKLQDISWPEDVDWTHKLTVEIDQGGAVDVNDDLARETAFYTQAL 102

Query: 155 QGTRMALEKFQSLGLPFLRPSDYYAEMVKTDTHMQKVKGRLLSEQRKMXXXXXXXXXXXX 214
           +GTR A  K   +G+ FLRP++YYAEMVK+D HM+KVK RLL E++++ XXXXXXXXXXX
Sbjct: 103 EGTREAFGKLNEMGVNFLRPANYYAEMVKSDVHMEKVKSRLLHEKKQIEXXXXXXXXXXX 162

Query: 215 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQKNNFAGGDKGGDMDFSFEDGKTFERS 274
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  ++ F+  DK G+ +  FE GK+F+R 
Sbjct: 163 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSGFS--DKAGEPELDFESGKSFQRG 222

Query: 275 GGKKRPGVSPGDRSGGKAXXXXXXXXXXXXXXXXXPKKKRDFRDSKFGFGGRKSLKKQNT 334
           GGKKRPGVSPGDRSGGK                    KKR+FRDSKFG GGRK L KQNT
Sbjct: 223 GGKKRPGVSPGDRSGGKGRPTSRMG-----------NKKREFRDSKFGHGGRKGLSKQNT 282

Query: 335 ADTTNDIR-GFNNGSLSSNKRRKK 358
           A+TTND + GF  G  S NKR+K+
Sbjct: 283 AETTNDFKGGFRGGKASGNKRQKR 293

[Close]

BLAST of CsGy5G005370 vs. Swiss-Prot
Match: sp|Q09958|EBP2_CAEEL (Probable rRNA-processing protein EBP2 homolog OS=Caenorhabditis elegans OX=6239 GN=C18A3.3 PE=1 SV=2)

HSP 1 Score: 71.2 bits (173), Expect = 2.6e-11
Identity = 102/236 (43.22%), Postives = 133/236 (56.36%), Query Frame = 0


Query: 114 DISWPENVEWIHKLTFDIEQEKEVDVNDDLTRELAFYTQALQGTRMALEKFQSLGLPFLR 173
           D+ W E +E +   T   E +K+V+ NDD  REL FY QA +  ++A  +  +LG+  LR
Sbjct: 102 DLPWVETLEVV---TPHSEMDKKVE-NDDFQRELNFYKQAEKAVQIAYPRLLNLGIKVLR 161

Query: 174 PSDYYAEMVKTDTHMQKVKGRLL--SEQRKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 233
           P+DYYAEM K+DTHMQKV+ RLL   E ++      XXXXXXXXXXXXXXXXXXX  XXX
Sbjct: 162 PTDYYAEMAKSDTHMQKVRKRLLGIQEMKERQEAFRXXXXXXXXXXXXXXXXXXXKNXXX 221

Query: 234 XXXXXXXXXXXXXXXRQKNNFAGGDKGGDMDFSFEDGKTFERSGGKKRPGVSPGDRSGGK 293
           X              +Q  +     K   +D   +             P  + GDR GG+
Sbjct: 222 XNLAEAVKKHKKGMKQQLEDMLNNVKRHGLDQDDD------------APTGAFGDRLGGR 281

Query: 294 AXXXXXXXXXXXXXXXXXPKKKRDFRDSKFGFGGRKSLKKQNTADTTNDIRGFNNG 348
             XXXXXXXXXXXXXX   + KR  +  KFG+GG+K   K+N  ++ ND+ G   G
Sbjct: 282 GGXXXXXXXXXXXXXXAG-ELKRKLKSDKFGYGGKKKGMKRNNKESFNDLFGAPRG 320

[Close]

BLAST of CsGy5G005370 vs. Swiss-Prot
Match: sp|O13802|EBP2_SCHPO (Probable rRNA-processing protein ebp2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ebp2 PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 3.7e-10
Identity = 35/101 (34.65%), Postives = 56/101 (55.45%), Query Frame = 0


Query: 99  KNAIYNADGLLDKLGDISWPENVEWIHKLTFDIEQEKEVD-VNDDLTRELAFYTQALQGT 158
           K AI N   L +    I +P+++ ++       ++   ++ V DDL RELAFY Q +   
Sbjct: 91  KLAINNTVALENIYERIKYPDDISFVENQAVTTKEPIIIENVEDDLARELAFYKQGVSSV 150

Query: 159 RMALEKFQSLGLPFLRPSDYYAEMVKTDTHMQKVKGRLLSE 199
           + A  K +   +   RP DY+AEM+K+D HM+KV+  L+ E
Sbjct: 151 KAAFAKLREANVLISRPHDYFAEMLKSDDHMEKVRQELIKE 191

[Close]

BLAST of CsGy5G005370 vs. Swiss-Prot
Match: sp|P36049|EBP2_YEAST (rRNA-processing protein EBP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=EBP2 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 6.3e-10
Identity = 56/218 (25.69%), Postives = 85/218 (38.99%), Query Frame = 0


Query: 138 DVNDDLTRELAFYTQALQGTRMALEKFQSLGLPFLRPSDYYAEMVKTDTHMQKVKGRLLS 197
           D+ DD  RELAFY Q+L    +A ++ + L +PF RP DY+AEMVK+D HM K+KG+L+ 
Sbjct: 235 DIYDDTERELAFYKQSLDAVLVARDELKRLKVPFKRPLDYFAEMVKSDEHMDKIKGKLIE 294

Query: 198 EQRKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQKNNFAGGDK 257
           E                                  XX            R+ N     + 
Sbjct: 295 EASDKKAREEARRQRQLKKFGKQVQNATLQKRQLEXXETLEKIKSLKNKRKHNEIDHSEF 354

Query: 258 GGDMDFSFEDGKTFERSGGKKRPGVSPGDRSGGKAXXXXXXXXXXXXXXXXXPKKKRDFR 317
              ++   E GK F+R                                    P  KR  +
Sbjct: 355 NVGVEEEVE-GKRFDRG----------------------------------RPNGKRAAK 414

Query: 318 DSKFGFGGRKSLKKQNTADTTNDIRGFNNGSLSSNKRR 356
           ++K+G GG K  K++N A ++ D+ GF++  +     R
Sbjct: 415 NAKYGQGGMKRFKRKNDATSSADVSGFSSRKMKGKTNR 417

[Close]

BLAST of CsGy5G005370 vs. Swiss-Prot
Match: sp|Q9I8J6|EBP2_XENLA (Probable rRNA-processing protein EBP2 OS=Xenopus laevis OX=8355 GN=ebna1bp2 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.4e-09
Identity = 36/121 (29.75%), Postives = 56/121 (46.28%), Query Frame = 0


Query: 96  EPSKNAIYNADGLLDKLGDISWPENVEWIHKLTFDIE--------------QEKEVDVND 155
           E  K    +A GL   L D+     + W+ +L   ++                 +++  D
Sbjct: 44  EGKKKPFNDASGLKQSLKDLK--NELPWVERLDVTVDPVVDTTGQNGQTDPNTSDINAED 103

Query: 156 DLTRELAFYTQALQGTRMALEKFQSLGLPFLRPSDYYAEMVKTDTHMQKVKGRLLSEQRK 203
           D  RE+ FY QA      +L + + L +   RP DY+AEM KTD HMQK++ +L  +Q  
Sbjct: 104 DFQREMCFYRQAQAAVLYSLPRLRKLKVATKRPDDYFAEMAKTDQHMQKIRHKLQLKQAS 162

[Close]

BLAST of CsGy5G005370 vs. TrEMBL
Match: tr|A0A0A0KL02|A0A0A0KL02_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G169110 PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 5.9e-114
Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0


Query: 47  MGVSIKDASFLNEDTVEDGDFSSEXXXXXXXXXXXXXXXXXXXXXXXXSEPSKNAIYNAD 106
           MGVSIKDASFLNEDTVEDGDFSSEXXXXXXXXXXXXXXXXXXXXXXXXSEPSKNAIYNAD
Sbjct: 1   MGVSIKDASFLNEDTVEDGDFSSEXXXXXXXXXXXXXXXXXXXXXXXXSEPSKNAIYNAD 60

Query: 107 GLLDKLGDISWPENVEWIHKLTFDIEQEKEVDVNDDLTRELAFYTQALQGTRMALEKFQS 166
           GLLDKLGDISWPENVEWIHKLTFDIEQEKEVDVNDDLTRELAFYTQALQGTRMALEKFQS
Sbjct: 61  GLLDKLGDISWPENVEWIHKLTFDIEQEKEVDVNDDLTRELAFYTQALQGTRMALEKFQS 120

Query: 167 LGLPFLRPSDYYAEMVKTDTHMQKVKGRLLSEQRKMXXXXXXXXXXXXXXXXXXXXXXXX 226
           LGLPFLRPSDYYAEMVKTDTHMQKVKGRLLSEQRKMXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 LGLPFLRPSDYYAEMVKTDTHMQKVKGRLLSEQRKMXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 227 XXXXXXXXXXXXXXXXXXXXRQKNNFAGGDKGGDMDFSFEDGKTFERSGGKKRPGVSPGD 286
           XXXXXXXXXXXXXXXXXXXXRQKNNFAGGDKGGDMDFSFEDGKTFERSGGKKRPGVSPGD
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXRQKNNFAGGDKGGDMDFSFEDGKTFERSGGKKRPGVSPGD 240

Query: 287 RSGGKAXXXXXXXXXXXXXXXXXPKKKRDFRDSKFGFGGRKSLKKQNTADTTNDIRGFNN 346
           RSGGKAXXXXXXXXXXXXXXXXXPKKKRDFRDSKFGFGGRKSLKKQNTADTTNDIRGFNN
Sbjct: 241 RSGGKAXXXXXXXXXXXXXXXXXPKKKRDFRDSKFGFGGRKSLKKQNTADTTNDIRGFNN 300

Query: 347 GSLSSNKRRKKSD 360
           GSLSSNKRRKKSD
Sbjct: 301 GSLSSNKRRKKSD 313

[Close]

BLAST of CsGy5G005370 vs. TrEMBL
Match: tr|A0A1S3CT69|A0A1S3CT69_CUCME (probable rRNA-processing protein EBP2 homolog OS=Cucumis melo OX=3656 GN=LOC103504670 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 3.5e-106
Identity = 299/313 (95.53%), Postives = 302/313 (96.49%), Query Frame = 0


Query: 47  MGVSIKDASFLNEDTVEDGDFSSEXXXXXXXXXXXXXXXXXXXXXXXXSEPSKNAIYNAD 106
           MGVSIKDA FLNEDTVED D SS XXXXXXXXXXXXXXXXXXXXXXXXSEPSKNAIYNAD
Sbjct: 1   MGVSIKDADFLNEDTVEDDDLSS-XXXXXXXXXXXXXXXXXXXXXXXXSEPSKNAIYNAD 60

Query: 107 GLLDKLGDISWPENVEWIHKLTFDIEQEKEVDVNDDLTRELAFYTQALQGTRMALEKFQS 166
           GLLDKLGDISWPENVEWIHKLTFDI+QEKEVDVNDDL RELAFYTQALQGTRMALEKFQS
Sbjct: 61  GLLDKLGDISWPENVEWIHKLTFDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQS 120

Query: 167 LGLPFLRPSDYYAEMVKTDTHMQKVKGRLLSEQRKMXXXXXXXXXXXXXXXXXXXXXXXX 226
           LGLPFLRPSDYYAEMVKTDTHMQKVKGRLLSEQRKMXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 LGLPFLRPSDYYAEMVKTDTHMQKVKGRLLSEQRKMXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 227 XXXXXXXXXXXXXXXXXXXXRQKNNFAGGDKGGDMDFSFEDGKTFERSGGKKRPGVSPGD 286
           XXXXXXXXXXXXXXXXXXXXRQKNNFAGGDKGGDMDFSFEDGKTFERSGGKKRPGVSPGD
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXRQKNNFAGGDKGGDMDFSFEDGKTFERSGGKKRPGVSPGD 240

Query: 287 RSGGKAXXXXXXXXXXXXXXXXXPKKKRDFRDSKFGFGGRKSLKKQNTADTTNDIRGFNN 346
           RSGGKA     XXXXXXXXXXXX KKKRDFRDSKFGFGGRKSLKKQNTA+TTNDIRGFNN
Sbjct: 241 RSGGKA-----XXXXXXXXXXXXXKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIRGFNN 300

Query: 347 GSLSSNKRRKKSD 360
           GSLS+NKRRKKSD
Sbjct: 301 GSLSNNKRRKKSD 307

[Close]

BLAST of CsGy5G005370 vs. TrEMBL
Match: tr|W9QN96|W9QN96_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_012206 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.9e-72
Identity = 185/261 (70.88%), Postives = 207/261 (79.31%), Query Frame = 0


Query: 96  EPSKNAIYNADGLLDKLGDISWPENVEWIHKLTFDIEQEKEVDVNDDLTRELAFYTQALQ 155
           EPSK A+YN DGLLDKLGDISWP+NV WIHKL+ DI+QE++VDVNDDL RELAF+ QAL+
Sbjct: 49  EPSKTAVYNTDGLLDKLGDISWPDNVGWIHKLSIDIDQEQQVDVNDDLARELAFFNQALE 108

Query: 156 GTRMALEKFQSLGLPFLRPSDYYAEMVKTDTHMQKVKGRLLSEQRKMXXXXXXXXXXXXX 215
           GT+ A EK QS+GLPFLRPSDYYAEMVKTD+HM+KVKGRLL+E+R +          XXX
Sbjct: 109 GTKRAFEKLQSMGLPFLRPSDYYAEMVKTDSHMEKVKGRLLAEKRNIEEAEERRKARXXX 168

Query: 216 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQKNNFAGGDKGGDMDFSFEDGKTFERSG 275
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQK+ FAGGDK G+MDFSFEDGK FERS 
Sbjct: 169 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQKSGFAGGDKDGEMDFSFEDGKGFERS- 228

Query: 276 GKKRPGVSPGDRSGGKAXXXXXXXXXXXXXXXXXPKKKRDFRDSKFGFGGRKSLKKQNTA 335
            KKRPGV+PGDRSGGKA                  +KKR FRDSKFGFGGRK LKKQNT 
Sbjct: 229 SKKRPGVAPGDRSGGKARQGGKGKI----------QKKRQFRDSKFGFGGRKGLKKQNTT 288

Query: 336 DTTNDIRGFNNGSLSSNKRRK 357
           +T ND R F  G+   NK+RK
Sbjct: 289 ETANDFRDFKRGNAKGNKKRK 298

[Close]

BLAST of CsGy5G005370 vs. TrEMBL
Match: tr|A0A2P5EMM9|A0A2P5EMM9_9ROSA (Eukaryotic rRNA processing OS=Trema orientalis OX=63057 GN=TorRG33x02_174420 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 3.3e-72
Identity = 194/263 (73.76%), Postives = 221/263 (84.03%), Query Frame = 0


Query: 95  SEPSKNAIYNADGLLDKLGDISWPENVEWIHKLTFDIEQEKEVDVNDDLTRELAFYTQAL 154
           +EPSKNAIYN DG+LDKLGDISWPENV WIHKL+ DI+QE++VDVNDDL RELAFY QAL
Sbjct: 52  AEPSKNAIYNTDGILDKLGDISWPENVGWIHKLSIDIDQEQQVDVNDDLARELAFYNQAL 111

Query: 155 QGTRMALEKFQSLGLPFLRPSDYYAEMVKTDTHMQKVKGRLLSEQRKMXXXXXXXXXXXX 214
           +GT+ A EK QS+GLPFLRP+DYYAEMVKTD+HM+KVKGRLL+E+R  XXXXXXXXXXXX
Sbjct: 112 EGTKKAFEKLQSMGLPFLRPADYYAEMVKTDSHMEKVKGRLLAEKRXXXXXXXXXXXXXX 171

Query: 215 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQKNNFAGGDKGGDMDFSFEDGKTFERS 274
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  ++ FAGGDK G+MDFSFEDGK+FERS
Sbjct: 172 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSGFAGGDKDGEMDFSFEDGKSFERS 231

Query: 275 GGKKRPGVSPGDRSGGKAXXXXXXXXXXXXXXXXXPKKKRDFRDSKFGFGGRKSLKKQNT 334
             KKRPGV+PGDRSGGK                    +KR+FRDSKFGFGG+K+LKKQNT
Sbjct: 232 -NKKRPGVAPGDRSGGKT----------RQVGKGKKPQKRNFRDSKFGFGGKKALKKQNT 291

Query: 335 ADTTNDIRGFNNGSLSSNKRRKK 358
           A+TTN+ R FN G  S NK+RK+
Sbjct: 292 AETTNEFRDFNKGHASGNKKRKR 303

[Close]

BLAST of CsGy5G005370 vs. TrEMBL
Match: tr|A0A061FZI4|A0A061FZI4_THECC (rRNA processing protein-related OS=Theobroma cacao OX=3641 GN=TCM_014985 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 5.6e-72
Identity = 191/263 (72.62%), Postives = 221/263 (84.03%), Query Frame = 0


Query: 95  SEPSKNAIYNADGLLDKLGDISWPENVEWIHKLTFDIEQEKEVDVNDDLTRELAFYTQAL 154
           +EPSKN+IYN DGL++KL DISWPENV+W+HKL+FDI+QEKEVDVNDDL RELAFYTQAL
Sbjct: 44  AEPSKNSIYNRDGLIEKLQDISWPENVDWMHKLSFDIDQEKEVDVNDDLARELAFYTQAL 103

Query: 155 QGTRMALEKFQSLGLPFLRPSDYYAEMVKTDTHMQKVKGRLLSEQRKMXXXXXXXXXXXX 214
           +GTR+A EKFQS+GLPFLRP DYYAEMVKTD HM KVKGRLL+++R++    XXXXXXXX
Sbjct: 104 EGTRLAFEKFQSMGLPFLRPPDYYAEMVKTDAHMHKVKGRLLAQKRQIEEAEXXXXXXXX 163

Query: 215 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQKNNFAGGDKGGDMDFSFEDGKTFERS 274
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RQ++ F  G K  ++D  FEDGK FERS
Sbjct: 164 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRQQSGFPAGGKDSELDLGFEDGKAFERS 223

Query: 275 GGKKRPGVSPGDRSGGKAXXXXXXXXXXXXXXXXXPKKKRDFRDSKFGFGGRKSLKKQNT 334
            GKKRPGV PGDRSGGKA             XXXX  K R+FR+SKFGFGGRK LKKQNT
Sbjct: 224 -GKKRPGVFPGDRSGGKA---------KQGGXXXXXXKNREFRNSKFGFGGRKGLKKQNT 283

Query: 335 ADTTNDIRGFNNGSLSSNKRRKK 358
           A+TTND+RGF+ GS++ NK+R++
Sbjct: 284 AETTNDLRGFSKGSVAGNKKRRR 296

The following BLAST results are available for this feature:

BLAST of CsGy5G005370 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143659.2	9.0e-114	100.00	PREDICTED: probable rRNA-processing protein EBP2 homolog [Cucumis sativus] >KGN5...	[more]
XP_008467285.1	5.3e-106	95.53	PREDICTED: probable rRNA-processing protein EBP2 homolog [Cucumis melo]	[more]
XP_022981565.1	1.8e-93	81.73	probable rRNA-processing protein EBP2 homolog [Cucurbita maxima]	[more]
XP_022926294.1	3.9e-93	82.54	probable rRNA-processing protein EBP2 homolog [Cucurbita moschata]	[more]
XP_023522121.1	8.2e-91	81.73	probable rRNA-processing protein EBP2 homolog [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy5G005370 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G22660.1	4.8e-61	65.53	rRNA processing protein-related	[more]

BLAST of CsGy5G005370 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LUJ5\|EBP2_ARATH	8.7e-60	65.53	Probable rRNA-processing protein EBP2 homolog OS=Arabidopsis thaliana OX=3702 GN...	[more]
sp\|Q09958\|EBP2_CAEEL	2.6e-11	43.22	Probable rRNA-processing protein EBP2 homolog OS=Caenorhabditis elegans OX=6239 ...	[more]
sp\|O13802\|EBP2_SCHPO	3.7e-10	34.65	Probable rRNA-processing protein ebp2 OS=Schizosaccharomyces pombe (strain 972 /...	[more]
sp\|P36049\|EBP2_YEAST	6.3e-10	25.69	rRNA-processing protein EBP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S...	[more]
sp\|Q9I8J6\|EBP2_XENLA	2.4e-09	29.75	Probable rRNA-processing protein EBP2 OS=Xenopus laevis OX=8355 GN=ebna1bp2 PE=2...	[more]

BLAST of CsGy5G005370 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KL02\|A0A0A0KL02_CUCSA	5.9e-114	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G169110 PE=4 SV=1	[more]
tr\|A0A1S3CT69\|A0A1S3CT69_CUCME	3.5e-106	95.53	probable rRNA-processing protein EBP2 homolog OS=Cucumis melo OX=3656 GN=LOC1035...	[more]
tr\|W9QN96\|W9QN96_9ROSA	1.9e-72	70.88	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_012206 PE=4 SV=1	[more]
tr\|A0A2P5EMM9\|A0A2P5EMM9_9ROSA	3.3e-72	73.76	Eukaryotic rRNA processing OS=Trema orientalis OX=63057 GN=TorRG33x02_174420 PE=...	[more]
tr\|A0A061FZI4\|A0A061FZI4_THECC	5.6e-72	72.62	rRNA processing protein-related OS=Theobroma cacao OX=3641 GN=TCM_014985 PE=4 SV...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008610	Ebp2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G005370.1	CsGy5G005370.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 188..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..251
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 260..280
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 308..325
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 330..351
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..359
IPR008610	Eukaryotic rRNA processing	PFAM	PF05890	Ebp2	coord: 82..356 e-value: 1.6E-73 score: 247.5
IPR008610	Eukaryotic rRNA processing	PANTHER	PTHR13028	RRNA PROCESSING PROTEIN EBNA1-BINDING PROTEIN-RELATED	coord: 63..353

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy5G005370	Cla003574	Watermelon (97103) v1	cgybwmB388
CsGy5G005370	Csa5G169110	Cucumber (Chinese Long) v2	cgybcuB224
CsGy5G005370	MELO3C005417	Melon (DHL92) v3.5.1	cgybmeB301
CsGy5G005370	ClCG01G005120	Watermelon (Charleston Gray)	cgybwcgB332
CsGy5G005370	CSPI05G07960	Wild cucumber (PI 183967)	cgybcpiB226
CsGy5G005370	CmaCh02G010090	Cucurbita maxima (Rimu)	cgybcmaB636
CsGy5G005370	CmoCh02G010240	Cucurbita moschata (Rifu)	cgybcmoB614
CsGy5G005370	Lsi09G005410	Bottle gourd (USVL1VR-Ls)	cgyblsiB294
CsGy5G005370	Cp4.1LG05g07080	Cucurbita pepo (Zucchini)	cgybcpeB692
CsGy5G005370	MELO3C005417.2	Melon (DHL92) v3.6.1	cgybmedB301
CsGy5G005370	CsaV3_5G005400	Cucumber (Chinese Long) v3	cgybcucB232
CsGy5G005370	Cla97C01G005350	Watermelon (97103) v2	cgybwmbB319
CsGy5G005370	Bhi12G000509	Wax gourd	cgybwgoB414
CsGy5G005370	Carg08469	Silver-seed gourd	carcgybB0711

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy5G005370	Wax gourd	cgybwgoB419
CsGy5G005370	Cucurbita maxima (Rimu)	cgybcmaB601
CsGy5G005370	Cucurbita moschata (Rifu)	cgybcmoB573
CsGy5G005370	Cucurbita pepo (Zucchini)	cgybcpeB608
CsGy5G005370	Bottle gourd (USVL1VR-Ls)	cgyblsiB346
CsGy5G005370	Melon (DHL92) v3.5.1	cgybmeB350
CsGy5G005370	Watermelon (97103) v1	cgybwmB376
CsGy5G005370	Silver-seed gourd	carcgybB1018