CsGy5G004310 (gene) Cucumber (Gy14) v2

Overview
NameCsGy5G004310
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr5 : 2868137 .. 2868448 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATCGAGATTTTCATTGAAATCAAAGGCGGGATTGATCTTGTCAAGAGCTTCCCTTAGAGCTTGTCTTTGTTCTTGTATTGAGCATATATTTGGAGTCGCACCAACGATGTATTCATGTTTATTAGAATCATTATTGGAATTATGAAGTTTTTGTTGAGCCTTCAAAATAGTGCTTCCAAATTTGGCTTTTAGCACTTCAACTCGAGCAGCCCGTCTTGGTGACAACACTACAATAGTGTTTGGCTTTATGGGCAATACCGGAATGTTATTCTTTGGTGATGGGCATTTGAAGTTTGCCAAATCATGA

mRNA sequence

ATGGAATCGAGATTTTCATTGAAATCAAAGGCGGGATTGATCTTGTCAAGAGCTTCCCTTAGAGCTTGTCTTTGTTCTTGTATTGAGCATATATTTGGAGTCGCACCAACGATCACTTCAACTCGAGCAGCCCGTCTTGGTGACAACACTACAATAGTGTTTGGCTTTATGGGCAATACCGGAATGTTATTCTTTGGTGATGGGCATTTGAAGTTTGCCAAATCATGA

Coding sequence (CDS)

ATGGAATCGAGATTTTCATTGAAATCAAAGGCGGGATTGATCTTGTCAAGAGCTTCCCTTAGAGCTTGTCTTTGTTCTTGTATTGAGCATATATTTGGAGTCGCACCAACGATCACTTCAACTCGAGCAGCCCGTCTTGGTGACAACACTACAATAGTGTTTGGCTTTATGGGCAATACCGGAATGTTATTCTTTGGTGATGGGCATTTGAAGTTTGCCAAATCATGA

Protein sequence

MESRFSLKSKAGLILSRASLRACLCSCIEHIFGVAPTITSTRAARLGDNTTIVFGFMGNTGMLFFGDGHLKFAKS
Homology
[Close]
BLAST of CsGy5G004310 vs. NCBI nr
Match: KGN61381.1 (hypothetical protein Csa_2G103600 [Cucumis sativus])

HSP 1 Score: 58.2 bits (139), Expect = 1.4e-05
Identity = 31/35 (88.57%), Postives = 32/35 (91.43%), Query Frame = 0 

Query: 39 TSTRAARLGDNTTI-VFGFMGNTGML-FFGDGHLK 72
          TSTRAARLGDNTTI VFGFMGN+ ML FFGDGHLK
Sbjct: 10 TSTRAARLGDNTTIVVFGFMGNSSMLFFFGDGHLK 44

[Close]
BLAST of CsGy5G004310 vs. TrEMBL
Match: tr|A0A0A0LN34|A0A0A0LN34_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G103600 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 9.5e-06
Identity = 31/35 (88.57%), Postives = 32/35 (91.43%), Query Frame = 0 

Query: 39 TSTRAARLGDNTTI-VFGFMGNTGML-FFGDGHLK 72
          TSTRAARLGDNTTI VFGFMGN+ ML FFGDGHLK
Sbjct: 10 TSTRAARLGDNTTIVVFGFMGNSSMLFFFGDGHLK 44

The following BLAST results are available for this feature:
BLAST of CsGy5G004310 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN61381.11.4e-0588.57hypothetical protein Csa_2G103600 [Cucumis sativus][more]
BLAST of CsGy5G004310 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy5G004310 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy5G004310 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LN34|A0A0A0LN34_CUCSA9.5e-0688.57Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G103600 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G004310.1CsGy5G004310.1mRNA