CsGy5G004280 (gene) Cucumber (Gy14) v2

NameCsGy5G004280
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptiontransmembrane protein
LocationChr5 : 2850346 .. 2854039 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTGTAAGTTTCTCCATCTTTAAGATCCAGATCTCGTTTAACACTAAATCAATTCAAAATCTCATATTCTAGGGTTCTTTTTGTATAAATTTCGTTTTCTTGTGCTGTGGAAATCCTGAATTTCTGATCCGGTAAACTTGATTTCGTTCCTCGCAGTTCAGCACGTTCATTGAAGTGGAACCGCCCAGTCCACTCCGATACATATTTGGGGCTGTTATAATGATGATCGGAGTCGTATTGCCTCTTGGATACATGCTGTTCCGGAATAAGCGTGGACCTTCTTCTTCTTCTTCTTACTCCAAACAGACGTAGGTGTGCCTATGAAATTTACTTGTCTTATTAGATTATTAGCTCTGTCTAATTTAATCATGATCTGTTTATGATTGCAAATCATGGTCAATATGAAATTCTATTTGTCCTTTAATTATTCGTTAACTTGATTTGTGGACTTCCGGAGCTCGGTTTTATTTCTTCTAGCGTTCGTTATTAGTATTCAGCTGTCTGAATTCACCTTGTAAATTCCTACATGATTTTTTTTTGTGTTGAATTATTTCTCGGGGATGTTAAAGGTGAAGGGAATGTCTCGTTTTGCGCTGAATTATCGATGTTGAGATTGAGAAAAGAACGATTATGCAGAGTATGCTGAAGCAAATGTTTTTGGGTCTAGCATAGGAGCTCCTTGTCTTCTTAGCTCATTGGTTACATTTGTTTAGGCTCTCTGCTTGAACTTGTTGTGGAACTATCATAAATTTAACAAATGATGTCAAAATGAGAATAGCTAAGCAGTAACGGGTATGATCCCTCCTCTAAAGGTGGGAGGTTTGAATCCTCCAACCACAATAGTTGTTCTAAAAAAAGAAATTTGACAAATTATCATGATCCTAAACTAGTTTTGTGCATGGAGGTAGAGGGAGAGTGGGATATTTTGAGTAGCTAATTGGTATGCCTATTCTAGGTATAATTTGAGTTGGTACATGTTGAAAGTTTGAAAACTTTAGTGGACAGATTTACTCATTCAACTTACAAATACCTTCCTTGGTTTGATCGGTTTGAGTTGCTAAACTGAAACCATCCTCCTGGTGCTCTCTCCAAGTCGTTTGCTAATTTTTTTTATTAGATTTGTATTGATTTGATTTTGGATACCTTCACTTTGTAACTATCCTTGCAATTGTTTTGCATTACGTTTGCTTTTAGTCCCTCCCTAATGAAATTTGAATAATGTACCTTTTGAGCATTACTCTCTTCTCATTTCTTTGTTGAAAAAGTTCCGTTTCTTGTTTGAAAACACTGAAATAGTTCATTTCTTCTTTCCTTCGACCTCTCAATATCCTCTTCTCCCCATTGCTGCCGAAGTTTGTCATCTGCTTGTGCCTCTATTATTTGTATTTCACTCATGACGGAAAGGCAATGTTAATAACTAGGTGGTAATGGATGGAGAGGCATATTGTCGATGGAATTTTCATCTTCCTCACAATAAGTGGTTGTCCAGAGTAAATTAAGACATTCAATTTGCAGAATGAACAATCTATATGATGATAATGCCATCCCCCTCGTACTTTATACTTGATCTATTGCCCTTTTACCTCCCTATTCTCCCTTTTCTTATGAAATCTTAGTCCTTGTAGCCCATTTTTAGTTTCAGAGTTGATCATCGTTGGGAATTGTACGTACATGATGCATTTATAATTAATGTAGGCATTTTCTAACCCCCATAAATGTAAAAGTTCTCTCTTATCTTCATGGAGAAACATCATTTTGGATTTTTGATGGAAGAAGATTCGACGAAGGAAAATTATTCCATAATTCTTTTGACCTTCAGGTCTAAGATAATCCCTCTCCTATCTGTGTCAATTGAGAGCTATCAACATGTAAAACATGTAAAAGTTACATGATTCATATTCGTAACGTTCTATAAGTTTTATGAAAGGACTATAGTGTAGTTTAAAGAAGGGCAGTGGAAGAGCTTGTAAGCAAAAAACTATAGATCTTTTGTAGTACATTGATACTTTTTTTGCGCAACACTAATGGGAAATCTGAAATTTGAAATTTTCAGGACCAAAGTTTTGATTTAGTTCCATAGAGGAAGAGACGCTTCTATTTCAGTTTTGGGGTCTCAGCTAATGGAGGGTGATGCTATTCTTCACAGGGTAATGTAAAAAATGCATTGAGATTTTAAATTTCTGTGGAAACTTACACGATTATAGTCCTAATCCAATTAAGGCATCGTCGTTTTGTATCGTTGAAAGAATTGTGTGTGGTTGCCTGTTGATGACATTCATTCATAGAGCCATGAAAGTAGTCTTTCTCGGTCCCAAAGATTCTCTTTCCCATCAGTGACTTTTCAATTTAAAGATTTTAGGTTTAGCCGAATCGGACGTTAATCAAACATTGCACTGCTACTAATCAGTTTTCTTTTCGTTCTATGCTTAGAAGAATCCTTCCAATGATCAATATCCAAACCATTATCACAGGTACGAGAAATGAAAGCAATGTTGTGTGTAGAAATATTGGAGTAGGAGAATGAAAGCAACAACTCGTAATATTATTAGTATATTTGTTGTGAAAATTGTGCTGAGAGTACTGTATATGAATAGAGTGAATAGGCAAAGAAGGTTATGAAGTCAAATCTCGTTAAGAATTATTTCCACCTTCCCAGTGCTTCTCCAGCTCGGACTCGGTCTCCACGTTTAATCGAAAACTTGAATTCTGATCTGGAGTCGTGTAAATTAGAAACAGGAGCCTGGAAGATGAGTACCACAGTTGATCCCATGTTGAAAGCTGCCATCTGCAAGCATTTGCCACACATCGAAGTTAACATGTAGTCAATAAGCAAAAGAAAATCTTGATTTGTTCAGACAGATCAATAACAAACAGCTTTCATCATTAGATTAAAATCTGATGTTTGATATTATACTTTTATATGTGATTTTCATAAAGTCGAAACTCATTCTCAAGTTTAAATAAAGTTGTTAAAGAGAAATATCTCAAAAGATACCTCATCCCCCTTTTTCAGCATTATCCCCACGCCTTCGGGTTCATATACCCTTTCCTCAGGAGGATCTGAATGGAGTGATTTTCTTCTCTTCGGTTTGTTTGTCCTAAGCTCTGGCTCAATGAAAACCTGAAACGTTCAGTGGTTAAGACCAAAGAATTTGCAATCACAAGAAGCTTAGTAATGATTAAAATCATTTTTATTATTTTTAAAATTATCTTGTTAAATGTTCATTTTAAACTAATTTTGATGATATAAAAGTTTCGATTAAAAGTAATAAATTAAATTTTGAGTATCTAAATATAATTTTAAACGTGACAAAAGTGGTTTGTAACAAGTTATTTTGCTCATATAAGCTTTGGTGCACGAACTTGAAGAGATATTGATCACCCAGGTTGCATATCCACTGCACACATATCTTCTATTCACTAAACTAAGCCAAAACCAATAGAAAGGAAAACTCACTTGACAATTATAAATGTATTTTCAGATTTTCAAACCATCTTTTTCCACTTTCTTGGTCAGGTTTCCAAATAATAGAGTTCAGAGTTTATAGCTTTATCAGCTCCAAGGAGAAGCATGATTACCTCGACAGATCCAATATTTGTTGCCCCAATAGCAGCAATGGCCATATATCCTTCCTGCCATAGACCTTCTAGCACAACCTGCAACATCGCCAACGATAACTTAAAGGCCTAG

mRNA sequence

ATGCCTTTCAGCACGTTCATTGAAGTGGAACCGCCCAGTCCACTCCGATACATATTTGGGGCTGTTATAATGATGATCGGAGTCGTATTGCCTCTTGGATACATGCTGTTCCGGAATAAGCGTGGACCTTCTTCTTCTTCTTCTTACTCCAAACAGACGTCTAAGATAATCCCTCTCCTATCTGTGTCAATTGAGAGCTATCAACATTTCCATAGAGGAAGAGACGCTTCTATTTCAGTTTTGGGGTCTCAGCTAATGGAGGGTGATGCTATTCTTCACAGGGCAAAGAAGGTTATGAAGTCAAATCTCGTTAAGAATTATTTCCACCTTCCCAGTGCTTCTCCAGCTCGGACTCGGTCTCCACGTTTAATCGAAAACTTGAATTCTGATCTGGAGTCGTGTAAATTAGAAACAGGAGCCTGGAAGATGAGTACCACAGTTGATCCCATGTTGAAAGCTGCCATCTGCAAGCATTTGCCACACATCGAAAGTTCAGAGTTTATAGCTTTATCAGCTCCAAGGAGAAGCATGATTACCTCGACAGATCCAATATTTGTTGCCCCAATAGCAGCAATGGCCATATATCCTTCCTGCCATAGACCTTCTAGCACAACCTGCAACATCGCCAACGATAACTTAAAGGCCTAG

Coding sequence (CDS)

ATGCCTTTCAGCACGTTCATTGAAGTGGAACCGCCCAGTCCACTCCGATACATATTTGGGGCTGTTATAATGATGATCGGAGTCGTATTGCCTCTTGGATACATGCTGTTCCGGAATAAGCGTGGACCTTCTTCTTCTTCTTCTTACTCCAAACAGACGTCTAAGATAATCCCTCTCCTATCTGTGTCAATTGAGAGCTATCAACATTTCCATAGAGGAAGAGACGCTTCTATTTCAGTTTTGGGGTCTCAGCTAATGGAGGGTGATGCTATTCTTCACAGGGCAAAGAAGGTTATGAAGTCAAATCTCGTTAAGAATTATTTCCACCTTCCCAGTGCTTCTCCAGCTCGGACTCGGTCTCCACGTTTAATCGAAAACTTGAATTCTGATCTGGAGTCGTGTAAATTAGAAACAGGAGCCTGGAAGATGAGTACCACAGTTGATCCCATGTTGAAAGCTGCCATCTGCAAGCATTTGCCACACATCGAAAGTTCAGAGTTTATAGCTTTATCAGCTCCAAGGAGAAGCATGATTACCTCGACAGATCCAATATTTGTTGCCCCAATAGCAGCAATGGCCATATATCCTTCCTGCCATAGACCTTCTAGCACAACCTGCAACATCGCCAACGATAACTTAAAGGCCTAG

Protein sequence

MPFSTFIEVEPPSPLRYIFGAVIMMIGVVLPLGYMLFRNKRGPSSSSSYSKQTSKIIPLLSVSIESYQHFHRGRDASISVLGSQLMEGDAILHRAKKVMKSNLVKNYFHLPSASPARTRSPRLIENLNSDLESCKLETGAWKMSTTVDPMLKAAICKHLPHIESSEFIALSAPRRSMITSTDPIFVAPIAAMAIYPSCHRPSSTTCNIANDNLKA
BLAST of CsGy5G004280 vs. NCBI nr
Match: XP_011654818.1 (PREDICTED: uncharacterized protein LOC101203605 isoform X1 [Cucumis sativus])

HSP 1 Score: 111.7 bits (278), Expect = 3.1e-21
Identity = 54/57 (94.74%), Postives = 57/57 (100.00%), Query Frame = 0

Query: 1  MPFSTFIEVEPPSPLRYIFGAVIMMIGVVLPLGYMLFRNKRGPSSSSSYSKQTSKII 58
          MPFSTFIEVEPPSPLRYIFGAVIMMIGVVLPLGYMLFRNKRGPSSSSSYSKQT+K++
Sbjct: 1  MPFSTFIEVEPPSPLRYIFGAVIMMIGVVLPLGYMLFRNKRGPSSSSSYSKQTTKVL 57

BLAST of CsGy5G004280 vs. NCBI nr
Match: XP_008437060.1 (PREDICTED: uncharacterized protein LOC103482600 isoform X1 [Cucumis melo])

HSP 1 Score: 109.4 bits (272), Expect = 1.6e-20
Identity = 53/57 (92.98%), Postives = 56/57 (98.25%), Query Frame = 0

Query: 1  MPFSTFIEVEPPSPLRYIFGAVIMMIGVVLPLGYMLFRNKRGPSSSSSYSKQTSKII 58
          MPFSTFIEVEPPSPLRYI GAVIMMIGVVLPLGYMLFRNKRGPSSSSSYSKQT+K++
Sbjct: 1  MPFSTFIEVEPPSPLRYIIGAVIMMIGVVLPLGYMLFRNKRGPSSSSSYSKQTTKVL 57

BLAST of CsGy5G004280 vs. NCBI nr
Match: XP_011654819.1 (PREDICTED: uncharacterized protein LOC101203605 isoform X2 [Cucumis sativus] >KGN50262.1 hypothetical protein Csa_5G162600 [Cucumis sativus])

HSP 1 Score: 107.5 bits (267), Expect = 5.9e-20
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0

Query: 1  MPFSTFIEVEPPSPLRYIFGAVIMMIGVVLPLGYMLFRNKRGPSSSSSYSKQT 54
          MPFSTFIEVEPPSPLRYIFGAVIMMIGVVLPLGYMLFRNKRGPSSSSSYSKQT
Sbjct: 1  MPFSTFIEVEPPSPLRYIFGAVIMMIGVVLPLGYMLFRNKRGPSSSSSYSKQT 53

BLAST of CsGy5G004280 vs. NCBI nr
Match: XP_022154813.1 (uncharacterized protein LOC111021976 isoform X1 [Momordica charantia])

HSP 1 Score: 105.9 bits (263), Expect = 1.7e-19
Identity = 51/55 (92.73%), Postives = 54/55 (98.18%), Query Frame = 0

Query: 1  MPFSTFIEVEPPSPLRYIFGAVIMMIGVVLPLGYMLFRNKRGPSSSSSYSKQTSK 56
          MPFSTFIEVEPPSPLRYI GAV+MMIGVVLPLGYM+FRNKRGPSSSSSYSKQT+K
Sbjct: 1  MPFSTFIEVEPPSPLRYIIGAVVMMIGVVLPLGYMMFRNKRGPSSSSSYSKQTTK 55

BLAST of CsGy5G004280 vs. NCBI nr
Match: XP_022996411.1 (uncharacterized protein LOC111491644 isoform X1 [Cucurbita maxima])

HSP 1 Score: 105.5 bits (262), Expect = 2.2e-19
Identity = 50/57 (87.72%), Postives = 54/57 (94.74%), Query Frame = 0

Query: 1  MPFSTFIEVEPPSPLRYIFGAVIMMIGVVLPLGYMLFRNKRGPSSSSSYSKQTSKII 58
          MPF TFIEVEPPSPLRYI GAVIMMIGVV PLGYM+FRNKRGPSSSSSYSKQT+K++
Sbjct: 1  MPFGTFIEVEPPSPLRYIIGAVIMMIGVVFPLGYMMFRNKRGPSSSSSYSKQTTKVL 57

BLAST of CsGy5G004280 vs. TAIR10
Match: AT4G16695.1 (unknown protein)

HSP 1 Score: 83.6 bits (205), Expect = 1.7e-16
Identity = 41/57 (71.93%), Postives = 49/57 (85.96%), Query Frame = 0

Query: 1  MPFSTFIEVEPPSPLRYIFGAVIMMIGVVLPLGYMLFRNKRGPSSSSSYSKQTSKII 58
          MPF T IEVEPPS LRY+ G+ +MMIGVVLP+GYM+FRNKR P  SSSYSKQT+K++
Sbjct: 1  MPFKTVIEVEPPSLLRYLIGSAVMMIGVVLPVGYMMFRNKRVP-FSSSYSKQTNKVL 56

BLAST of CsGy5G004280 vs. TrEMBL
Match: tr|A0A1S3AT37|A0A1S3AT37_CUCME (uncharacterized protein LOC103482600 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482600 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 1.0e-20
Identity = 53/57 (92.98%), Postives = 56/57 (98.25%), Query Frame = 0

Query: 1  MPFSTFIEVEPPSPLRYIFGAVIMMIGVVLPLGYMLFRNKRGPSSSSSYSKQTSKII 58
          MPFSTFIEVEPPSPLRYI GAVIMMIGVVLPLGYMLFRNKRGPSSSSSYSKQT+K++
Sbjct: 1  MPFSTFIEVEPPSPLRYIIGAVIMMIGVVLPLGYMLFRNKRGPSSSSSYSKQTTKVL 57

BLAST of CsGy5G004280 vs. TrEMBL
Match: tr|A0A0A0KPA4|A0A0A0KPA4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G162600 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 3.9e-20
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0

Query: 1  MPFSTFIEVEPPSPLRYIFGAVIMMIGVVLPLGYMLFRNKRGPSSSSSYSKQT 54
          MPFSTFIEVEPPSPLRYIFGAVIMMIGVVLPLGYMLFRNKRGPSSSSSYSKQT
Sbjct: 1  MPFSTFIEVEPPSPLRYIFGAVIMMIGVVLPLGYMLFRNKRGPSSSSSYSKQT 53

BLAST of CsGy5G004280 vs. TrEMBL
Match: tr|A0A1S3ATP1|A0A1S3ATP1_CUCME (uncharacterized protein LOC103482600 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482600 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.9e-19
Identity = 52/53 (98.11%), Postives = 52/53 (98.11%), Query Frame = 0

Query: 1  MPFSTFIEVEPPSPLRYIFGAVIMMIGVVLPLGYMLFRNKRGPSSSSSYSKQT 54
          MPFSTFIEVEPPSPLRYI GAVIMMIGVVLPLGYMLFRNKRGPSSSSSYSKQT
Sbjct: 1  MPFSTFIEVEPPSPLRYIIGAVIMMIGVVLPLGYMLFRNKRGPSSSSSYSKQT 53

BLAST of CsGy5G004280 vs. TrEMBL
Match: tr|A0A2K2BY90|A0A2K2BY90_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G156500v3 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 5.8e-16
Identity = 44/55 (80.00%), Postives = 50/55 (90.91%), Query Frame = 0

Query: 1  MPFSTFIEVEPPSPLRYIFGAVIMMIGVVLPLGYMLFRNKRGPSSSSSYSKQTSK 56
          MP+   +EVEPPSPLRYI GA IMMIGVVLP+GYM+FRNKRGPSSSS+YSKQT+K
Sbjct: 1  MPYRRIMEVEPPSPLRYIIGAAIMMIGVVLPVGYMMFRNKRGPSSSSTYSKQTAK 55

BLAST of CsGy5G004280 vs. TrEMBL
Match: tr|A0A1U8HH09|A0A1U8HH09_GOSHI (uncharacterized protein LOC107886068 isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC107886068 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.7e-15
Identity = 45/57 (78.95%), Postives = 51/57 (89.47%), Query Frame = 0

Query: 1  MPFSTFIEVEPPSPLRYIFGAVIMMIGVVLPLGYMLFRNKRGPSSSSSYSKQTSKII 58
          MPF T IEVEPPSPLRYI GA +MMIGVVLP+GYM+FRNKR P SSSSYSKQT+K++
Sbjct: 1  MPFKTMIEVEPPSPLRYIIGAAVMMIGVVLPVGYMMFRNKRVP-SSSSYSKQTNKVL 56

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011654818.13.1e-2194.74PREDICTED: uncharacterized protein LOC101203605 isoform X1 [Cucumis sativus][more]
XP_008437060.11.6e-2092.98PREDICTED: uncharacterized protein LOC103482600 isoform X1 [Cucumis melo][more]
XP_011654819.15.9e-20100.00PREDICTED: uncharacterized protein LOC101203605 isoform X2 [Cucumis sativus] >KG... [more]
XP_022154813.11.7e-1992.73uncharacterized protein LOC111021976 isoform X1 [Momordica charantia][more]
XP_022996411.12.2e-1987.72uncharacterized protein LOC111491644 isoform X1 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT4G16695.11.7e-1671.93unknown protein[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S3AT37|A0A1S3AT37_CUCME1.0e-2092.98uncharacterized protein LOC103482600 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A0A0KPA4|A0A0A0KPA4_CUCSA3.9e-20100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G162600 PE=4 SV=1[more]
tr|A0A1S3ATP1|A0A1S3ATP1_CUCME1.9e-1998.11uncharacterized protein LOC103482600 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A2K2BY90|A0A2K2BY90_POPTR5.8e-1680.00Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G156500v3 PE=... [more]
tr|A0A1U8HH09|A0A1U8HH09_GOSHI1.7e-1578.95uncharacterized protein LOC107886068 isoform X1 OS=Gossypium hirsutum OX=3635 GN... [more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G004280.1CsGy5G004280.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37749FAMILY NOT NAMEDcoord: 1..56

The following gene(s) are paralogous to this gene:

None