CsGy5G004280 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTGTAAGTTTCTCCATCTTTAAGATCCAGATCTCGTTTAACACTAAATCAATTCAAAATCTCATATTCTAGGGTTCTTTTTGTATAAATTTCGTTTTCTTGTGCTGTGGAAATCCTGAATTTCTGATCCGGTAAACTTGATTTCGTTCCTCGCAGTTCAGCACGTTCATTGAAGTGGAACCGCCCAGTCCACTCCGATACATATTTGGGGCTGTTATAATGATGATCGGAGTCGTATTGCCTCTTGGATACATGCTGTTCCGGAATAAGCGTGGACCTTCTTCTTCTTCTTCTTACTCCAAACAGACGTAGGTGTGCCTATGAAATTTACTTGTCTTATTAGATTATTAGCTCTGTCTAATTTAATCATGATCTGTTTATGATTGCAAATCATGGTCAATATGAAATTCTATTTGTCCTTTAATTATTCGTTAACTTGATTTGTGGACTTCCGGAGCTCGGTTTTATTTCTTCTAGCGTTCGTTATTAGTATTCAGCTGTCTGAATTCACCTTGTAAATTCCTACATGATTTTTTTTTGTGTTGAATTATTTCTCGGGGATGTTAAAGGTGAAGGGAATGTCTCGTTTTGCGCTGAATTATCGATGTTGAGATTGAGAAAAGAACGATTATGCAGAGTATGCTGAAGCAAATGTTTTTGGGTCTAGCATAGGAGCTCCTTGTCTTCTTAGCTCATTGGTTACATTTGTTTAGGCTCTCTGCTTGAACTTGTTGTGGAACTATCATAAATTTAACAAATGATGTCAAAATGAGAATAGCTAAGCAGTAACGGGTATGATCCCTCCTCTAAAGGTGGGAGGTTTGAATCCTCCAACCACAATAGTTGTTCTAAAAAAAGAAATTTGACAAATTATCATGATCCTAAACTAGTTTTGTGCATGGAGGTAGAGGGAGAGTGGGATATTTTGAGTAGCTAATTGGTATGCCTATTCTAGGTATAATTTGAGTTGGTACATGTTGAAAGTTTGAAAACTTTAGTGGACAGATTTACTCATTCAACTTACAAATACCTTCCTTGGTTTGATCGGTTTGAGTTGCTAAACTGAAACCATCCTCCTGGTGCTCTCTCCAAGTCGTTTGCTAATTTTTTTTATTAGATTTGTATTGATTTGATTTTGGATACCTTCACTTTGTAACTATCCTTGCAATTGTTTTGCATTACGTTTGCTTTTAGTCCCTCCCTAATGAAATTTGAATAATGTACCTTTTGAGCATTACTCTCTTCTCATTTCTTTGTTGAAAAAGTTCCGTTTCTTGTTTGAAAACACTGAAATAGTTCATTTCTTCTTTCCTTCGACCTCTCAATATCCTCTTCTCCCCATTGCTGCCGAAGTTTGTCATCTGCTTGTGCCTCTATTATTTGTATTTCACTCATGACGGAAAGGCAATGTTAATAACTAGGTGGTAATGGATGGAGAGGCATATTGTCGATGGAATTTTCATCTTCCTCACAATAAGTGGTTGTCCAGAGTAAATTAAGACATTCAATTTGCAGAATGAACAATCTATATGATGATAATGCCATCCCCCTCGTACTTTATACTTGATCTATTGCCCTTTTACCTCCCTATTCTCCCTTTTCTTATGAAATCTTAGTCCTTGTAGCCCATTTTTAGTTTCAGAGTTGATCATCGTTGGGAATTGTACGTACATGATGCATTTATAATTAATGTAGGCATTTTCTAACCCCCATAAATGTAAAAGTTCTCTCTTATCTTCATGGAGAAACATCATTTTGGATTTTTGATGGAAGAAGATTCGACGAAGGAAAATTATTCCATAATTCTTTTGACCTTCAGGTCTAAGATAATCCCTCTCCTATCTGTGTCAATTGAGAGCTATCAACATGTAAAACATGTAAAAGTTACATGATTCATATTCGTAACGTTCTATAAGTTTTATGAAAGGACTATAGTGTAGTTTAAAGAAGGGCAGTGGAAGAGCTTGTAAGCAAAAAACTATAGATCTTTTGTAGTACATTGATACTTTTTTTGCGCAACACTAATGGGAAATCTGAAATTTGAAATTTTCAGGACCAAAGTTTTGATTTAGTTCCATAGAGGAAGAGACGCTTCTATTTCAGTTTTGGGGTCTCAGCTAATGGAGGGTGATGCTATTCTTCACAGGGTAATGTAAAAAATGCATTGAGATTTTAAATTTCTGTGGAAACTTACACGATTATAGTCCTAATCCAATTAAGGCATCGTCGTTTTGTATCGTTGAAAGAATTGTGTGTGGTTGCCTGTTGATGACATTCATTCATAGAGCCATGAAAGTAGTCTTTCTCGGTCCCAAAGATTCTCTTTCCCATCAGTGACTTTTCAATTTAAAGATTTTAGGTTTAGCCGAATCGGACGTTAATCAAACATTGCACTGCTACTAATCAGTTTTCTTTTCGTTCTATGCTTAGAAGAATCCTTCCAATGATCAATATCCAAACCATTATCACAGGTACGAGAAATGAAAGCAATGTTGTGTGTAGAAATATTGGAGTAGGAGAATGAAAGCAACAACTCGTAATATTATTAGTATATTTGTTGTGAAAATTGTGCTGAGAGTACTGTATATGAATAGAGTGAATAGGCAAAGAAGGTTATGAAGTCAAATCTCGTTAAGAATTATTTCCACCTTCCCAGTGCTTCTCCAGCTCGGACTCGGTCTCCACGTTTAATCGAAAACTTGAATTCTGATCTGGAGTCGTGTAAATTAGAAACAGGAGCCTGGAAGATGAGTACCACAGTTGATCCCATGTTGAAAGCTGCCATCTGCAAGCATTTGCCACACATCGAAGTTAACATGTAGTCAATAAGCAAAAGAAAATCTTGATTTGTTCAGACAGATCAATAACAAACAGCTTTCATCATTAGATTAAAATCTGATGTTTGATATTATACTTTTATATGTGATTTTCATAAAGTCGAAACTCATTCTCAAGTTTAAATAAAGTTGTTAAAGAGAAATATCTCAAAAGATACCTCATCCCCCTTTTTCAGCATTATCCCCACGCCTTCGGGTTCATATACCCTTTCCTCAGGAGGATCTGAATGGAGTGATTTTCTTCTCTTCGGTTTGTTTGTCCTAAGCTCTGGCTCAATGAAAACCTGAAACGTTCAGTGGTTAAGACCAAAGAATTTGCAATCACAAGAAGCTTAGTAATGATTAAAATCATTTTTATTATTTTTAAAATTATCTTGTTAAATGTTCATTTTAAACTAATTTTGATGATATAAAAGTTTCGATTAAAAGTAATAAATTAAATTTTGAGTATCTAAATATAATTTTAAACGTGACAAAAGTGGTTTGTAACAAGTTATTTTGCTCATATAAGCTTTGGTGCACGAACTTGAAGAGATATTGATCACCCAGGTTGCATATCCACTGCACACATATCTTCTATTCACTAAACTAAGCCAAAACCAATAGAAAGGAAAACTCACTTGACAATTATAAATGTATTTTCAGATTTTCAAACCATCTTTTTCCACTTTCTTGGTCAGGTTTCCAAATAATAGAGTTCAGAGTTTATAGCTTTATCAGCTCCAAGGAGAAGCATGATTACCTCGACAGATCCAATATTTGTTGCCCCAATAGCAGCAATGGCCATATATCCTTCCTGCCATAGACCTTCTAGCACAACCTGCAACATCGCCAACGATAACTTAAAGGCCTAG ATGCCTTTCAGCACGTTCATTGAAGTGGAACCGCCCAGTCCACTCCGATACATATTTGGGGCTGTTATAATGATGATCGGAGTCGTATTGCCTCTTGGATACATGCTGTTCCGGAATAAGCGTGGACCTTCTTCTTCTTCTTCTTACTCCAAACAGACGTCTAAGATAATCCCTCTCCTATCTGTGTCAATTGAGAGCTATCAACATTTCCATAGAGGAAGAGACGCTTCTATTTCAGTTTTGGGGTCTCAGCTAATGGAGGGTGATGCTATTCTTCACAGGGCAAAGAAGGTTATGAAGTCAAATCTCGTTAAGAATTATTTCCACCTTCCCAGTGCTTCTCCAGCTCGGACTCGGTCTCCACGTTTAATCGAAAACTTGAATTCTGATCTGGAGTCGTGTAAATTAGAAACAGGAGCCTGGAAGATGAGTACCACAGTTGATCCCATGTTGAAAGCTGCCATCTGCAAGCATTTGCCACACATCGAAAGTTCAGAGTTTATAGCTTTATCAGCTCCAAGGAGAAGCATGATTACCTCGACAGATCCAATATTTGTTGCCCCAATAGCAGCAATGGCCATATATCCTTCCTGCCATAGACCTTCTAGCACAACCTGCAACATCGCCAACGATAACTTAAAGGCCTAG ATGCCTTTCAGCACGTTCATTGAAGTGGAACCGCCCAGTCCACTCCGATACATATTTGGGGCTGTTATAATGATGATCGGAGTCGTATTGCCTCTTGGATACATGCTGTTCCGGAATAAGCGTGGACCTTCTTCTTCTTCTTCTTACTCCAAACAGACGTCTAAGATAATCCCTCTCCTATCTGTGTCAATTGAGAGCTATCAACATTTCCATAGAGGAAGAGACGCTTCTATTTCAGTTTTGGGGTCTCAGCTAATGGAGGGTGATGCTATTCTTCACAGGGCAAAGAAGGTTATGAAGTCAAATCTCGTTAAGAATTATTTCCACCTTCCCAGTGCTTCTCCAGCTCGGACTCGGTCTCCACGTTTAATCGAAAACTTGAATTCTGATCTGGAGTCGTGTAAATTAGAAACAGGAGCCTGGAAGATGAGTACCACAGTTGATCCCATGTTGAAAGCTGCCATCTGCAAGCATTTGCCACACATCGAAAGTTCAGAGTTTATAGCTTTATCAGCTCCAAGGAGAAGCATGATTACCTCGACAGATCCAATATTTGTTGCCCCAATAGCAGCAATGGCCATATATCCTTCCTGCCATAGACCTTCTAGCACAACCTGCAACATCGCCAACGATAACTTAAAGGCCTAG MPFSTFIEVEPPSPLRYIFGAVIMMIGVVLPLGYMLFRNKRGPSSSSSYSKQTSKIIPLLSVSIESYQHFHRGRDASISVLGSQLMEGDAILHRAKKVMKSNLVKNYFHLPSASPARTRSPRLIENLNSDLESCKLETGAWKMSTTVDPMLKAAICKHLPHIESSEFIALSAPRRSMITSTDPIFVAPIAAMAIYPSCHRPSSTTCNIANDNLKA
BLAST of CsGy5G004280 vs. NCBI nr
Match: XP_011654818.1 (PREDICTED: uncharacterized protein LOC101203605 isoform X1 [Cucumis sativus]) HSP 1 Score: 111.7 bits (278), Expect = 3.1e-21 Identity = 54/57 (94.74%), Postives = 57/57 (100.00%), Query Frame = 0
BLAST of CsGy5G004280 vs. NCBI nr
Match: XP_008437060.1 (PREDICTED: uncharacterized protein LOC103482600 isoform X1 [Cucumis melo]) HSP 1 Score: 109.4 bits (272), Expect = 1.6e-20 Identity = 53/57 (92.98%), Postives = 56/57 (98.25%), Query Frame = 0
BLAST of CsGy5G004280 vs. NCBI nr
Match: XP_011654819.1 (PREDICTED: uncharacterized protein LOC101203605 isoform X2 [Cucumis sativus] >KGN50262.1 hypothetical protein Csa_5G162600 [Cucumis sativus]) HSP 1 Score: 107.5 bits (267), Expect = 5.9e-20 Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0
BLAST of CsGy5G004280 vs. NCBI nr
Match: XP_022154813.1 (uncharacterized protein LOC111021976 isoform X1 [Momordica charantia]) HSP 1 Score: 105.9 bits (263), Expect = 1.7e-19 Identity = 51/55 (92.73%), Postives = 54/55 (98.18%), Query Frame = 0
BLAST of CsGy5G004280 vs. NCBI nr
Match: XP_022996411.1 (uncharacterized protein LOC111491644 isoform X1 [Cucurbita maxima]) HSP 1 Score: 105.5 bits (262), Expect = 2.2e-19 Identity = 50/57 (87.72%), Postives = 54/57 (94.74%), Query Frame = 0
BLAST of CsGy5G004280 vs. TAIR10
Match: AT4G16695.1 (unknown protein) HSP 1 Score: 83.6 bits (205), Expect = 1.7e-16 Identity = 41/57 (71.93%), Postives = 49/57 (85.96%), Query Frame = 0
BLAST of CsGy5G004280 vs. TrEMBL
Match: tr|A0A1S3AT37|A0A1S3AT37_CUCME (uncharacterized protein LOC103482600 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482600 PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 1.0e-20 Identity = 53/57 (92.98%), Postives = 56/57 (98.25%), Query Frame = 0
BLAST of CsGy5G004280 vs. TrEMBL
Match: tr|A0A0A0KPA4|A0A0A0KPA4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G162600 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 3.9e-20 Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0
BLAST of CsGy5G004280 vs. TrEMBL
Match: tr|A0A1S3ATP1|A0A1S3ATP1_CUCME (uncharacterized protein LOC103482600 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482600 PE=4 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 1.9e-19 Identity = 52/53 (98.11%), Postives = 52/53 (98.11%), Query Frame = 0
BLAST of CsGy5G004280 vs. TrEMBL
Match: tr|A0A2K2BY90|A0A2K2BY90_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G156500v3 PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 5.8e-16 Identity = 44/55 (80.00%), Postives = 50/55 (90.91%), Query Frame = 0
BLAST of CsGy5G004280 vs. TrEMBL
Match: tr|A0A1U8HH09|A0A1U8HH09_GOSHI (uncharacterized protein LOC107886068 isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC107886068 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 1.7e-15 Identity = 45/57 (78.95%), Postives = 51/57 (89.47%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |