CsGy5G004130 (gene) Cucumber (Gy14) v2

Overview
NameCsGy5G004130
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptionleukocyte receptor cluster member 1 homolog
LocationChr5 : 2766276 .. 2767949 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGGTCATGGAGGTTTAAATATTCTTCCCCAAAAGCGTTGGAATGTTTACAACTACGAAAACAGAGAGAAAGTGAAGCGAGATGAAGAAGCTGCAGCCAAAGAAGAACAGCTTAAACGTGAGCAGGTTAGGAAACGGGATGCTGAGTTTCGTCTCGAGCAGCTTCGTACTGCACGGGGTTTAGCTCCAGTAATTGACACTTCAAAGCCAGTAGAAACAGACCTGAAACCTGGTCACATAAATCTATTTGAAGGCATCAAGATTTTTGACCCAATTAAGGGTTCAGACAATGGGGGAGTTGAAGATGGGTCTAAGAAGAAGAGGATGAAGAAGGAAGAAGTGGAAAAAAGGGTTATCACACCTGAAGATGAGAAGTATAAGTTAGGTTATGGTGTTGCTGGAAAAGGAGTCAAAATGCCATGGTACCTTGAGAGGCCCACCAAGGATGATGACACGGAGACTGGCGAAAATGATGGATCGTTGAGAGTAGGGAGTGGAAATGTAAAGAAGGGAGAAAAAAAGACATTGGAAGAATTGAGGGCTGAGCGTCTGAAACGAGAGCAGAAGGAGAAGGGAAGGGAGCGTGCTTTAATCGCAGAGAGAAGCCGGAAGAGTGGAATAGCTTCAAGGGAAGGAGATCCATCTTCCAGGAGGTAAGCATATATTAAGCTAACAACAATGTTCTTGTCATTGTTCTTTATTTTGGAGGGTCCATGTTACGTTATTTCTCAAGTCACATAAAAGTGTTCAAGGCGCTGAAAGGAAATAGCAAATGAGATGAGTAGAAAATAGTAGATACTATAACAAAGAAGGATTATTTGAAATAGTGATTCCTAGTTAACTTTAGGTTATAATAGTCGGACACATCAATTATTATATTTAGACCAGAGTATTTAACTTCTAATGGGATTCTAGAGTCTAATTGATATCAGATGATAGGGACTTAGAGAGCTAACCAGAAGTTCAATTCCACATGAGAACTAACTAGAAGTTCTGTTTCTTACATTCATCAAGAACAGTTAGATACGACAAAGTAATATTCACTTTTCTGAAGTTCACAATTTTGTTGAAACATATTGTATCACTACATTTCATTCACCTAGCATTCTAGATTATTTAGGCCCTTTTGATGGGTTCTGCTACATGTGATTAATTTTAACATATGAACATGCTAGGAGAAGAAAAGCTTCATTGAATTGATTAGAGAGAAAAAAAACTAATTTTTATTTGAACTCCTTTCTATGCAGGTGGAAATCCAGAAGATAAAGACTCAGGTTTTCTGGATCACGAATGATTTTATCTTGGCTTTAGCTCAGTTTTTTAAGGAGGCCGACTTTCGGAATTTGCTCTCTTTCCAAATCTCAACAGGGTTGTTTTATGAACAAAGGCCTCCTGAATCTTGAAAAACTTGATCACACTGTGGCTGAAATTTATCTGGGCCATGTGAATTTTGTAGTTTGGAATTCACGTGGACAAGATTTGTGTACATATAAGGTAATGTTCATCATTGAGATACACCATATCAACTGTAATAGCGATCGTATCAAACTTGAAAACATGACATGCAGCAAGATGCGGTTGGTACTTGTGACATTGTCGATGTTATTACAAGTCAATGTGATCAGTAGAACATGTGATTTGCCTTGTAAAGAAGGCTATCAAATGTCCTAG

mRNA sequence

ATGGGAGGTCATGGAGGTTTAAATATTCTTCCCCAAAAGCGTTGGAATGTTTACAACTACGAAAACAGAGAGAAAGTGAAGCGAGATGAAGAAGCTGCAGCCAAAGAAGAACAGCTTAAACGTGAGCAGGTTAGGAAACGGGATGCTGAGTTTCGTCTCGAGCAGCTTCGTACTGCACGGGGTTTAGCTCCAGTAATTGACACTTCAAAGCCAGTAGAAACAGACCTGAAACCTGGTCACATAAATCTATTTGAAGGCATCAAGATTTTTGACCCAATTAAGGGTTCAGACAATGGGGGAGTTGAAGATGGGTCTAAGAAGAAGAGGATGAAGAAGGAAGAAGTGGAAAAAAGGGTTATCACACCTGAAGATGAGAAGTATAAGTTAGGTTATGGTGTTGCTGGAAAAGGAGTCAAAATGCCATGGTACCTTGAGAGGCCCACCAAGGATGATGACACGGAGACTGGCGAAAATGATGGATCGTTGAGAGTAGGGAGTGGAAATGTAAAGAAGGGAGAAAAAAAGACATTGGAAGAATTGAGGGCTGAGCGTCTGAAACGAGAGCAGAAGGAGAAGGGAAGGGAGCGTGCTTTAATCGCAGAGAGAAGCCGGAAGAGTGGAATAGCTTCAAGGGAAGGAGATCCATCTTCCAGGAGGAGGCCGACTTTCGGAATTTGCTCTCTTTCCAAATCTCAACAGGGTTGTTTTATGAACAAAGGCCTCCTGAATCTTGAAAAACTTGATCACACTGTGGCTGAAATTTATCTGGGCCATGTGAATTTTGTAGTTTGGAATTCACGTGGACAAGATTTGTGTACATATAAGGTAATGTTCATCATTGAGATACACCATATCAACTGTAATAGCGATCGTATCAAACTTGAAAACATGACATGCAGCAAGATGCGGTTGGTACTTGTGACATTGTCGATGTTATTACAAGTCAATGTGATCAGTAGAACATGTGATTTGCCTTGTAAAGAAGGCTATCAAATGTCCTAG

Coding sequence (CDS)

ATGGGAGGTCATGGAGGTTTAAATATTCTTCCCCAAAAGCGTTGGAATGTTTACAACTACGAAAACAGAGAGAAAGTGAAGCGAGATGAAGAAGCTGCAGCCAAAGAAGAACAGCTTAAACGTGAGCAGGTTAGGAAACGGGATGCTGAGTTTCGTCTCGAGCAGCTTCGTACTGCACGGGGTTTAGCTCCAGTAATTGACACTTCAAAGCCAGTAGAAACAGACCTGAAACCTGGTCACATAAATCTATTTGAAGGCATCAAGATTTTTGACCCAATTAAGGGTTCAGACAATGGGGGAGTTGAAGATGGGTCTAAGAAGAAGAGGATGAAGAAGGAAGAAGTGGAAAAAAGGGTTATCACACCTGAAGATGAGAAGTATAAGTTAGGTTATGGTGTTGCTGGAAAAGGAGTCAAAATGCCATGGTACCTTGAGAGGCCCACCAAGGATGATGACACGGAGACTGGCGAAAATGATGGATCGTTGAGAGTAGGGAGTGGAAATGTAAAGAAGGGAGAAAAAAAGACATTGGAAGAATTGAGGGCTGAGCGTCTGAAACGAGAGCAGAAGGAGAAGGGAAGGGAGCGTGCTTTAATCGCAGAGAGAAGCCGGAAGAGTGGAATAGCTTCAAGGGAAGGAGATCCATCTTCCAGGAGGAGGCCGACTTTCGGAATTTGCTCTCTTTCCAAATCTCAACAGGGTTGTTTTATGAACAAAGGCCTCCTGAATCTTGAAAAACTTGATCACACTGTGGCTGAAATTTATCTGGGCCATGTGAATTTTGTAGTTTGGAATTCACGTGGACAAGATTTGTGTACATATAAGGTAATGTTCATCATTGAGATACACCATATCAACTGTAATAGCGATCGTATCAAACTTGAAAACATGACATGCAGCAAGATGCGGTTGGTACTTGTGACATTGTCGATGTTATTACAAGTCAATGTGATCAGTAGAACATGTGATTTGCCTTGTAAAGAAGGCTATCAAATGTCCTAG

Protein sequence

MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQVRKRDAEFRLEQLRTARGLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKRVITPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGSGNVKKGEKKTLEELRAERLKREQKEKGRERALIAERSRKSGIASREGDPSSRRRPTFGICSLSKSQQGCFMNKGLLNLEKLDHTVAEIYLGHVNFVVWNSRGQDLCTYKVMFIIEIHHINCNSDRIKLENMTCSKMRLVLVTLSMLLQVNVISRTCDLPCKEGYQMS
Homology
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BLAST of CsGy5G004130 vs. NCBI nr
Match: XP_004152406.1 (PREDICTED: leukocyte receptor cluster member 1 homolog [Cucumis sativus] >XP_011654797.1 PREDICTED: leukocyte receptor cluster member 1 homolog [Cucumis sativus] >KGN50248.1 hypothetical protein Csa_5G161970 [Cucumis sativus])

HSP 1 Score: 405.2 bits (1040), Expect = 2.1e-109
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0 

Query: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEXXXXXXXXXKRDAEFRLEQLRTAR 60
           MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEXXXXXXXXXKRDAEFRLEQLRTAR
Sbjct: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEXXXXXXXXXKRDAEFRLEQLRTAR 60

Query: 61  GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKRVI 120
           GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKRVI
Sbjct: 61  GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKRVI 120

Query: 121 TPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGSGNVKKGEKKTLEEL 180
           TPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGSGNVKKGEKKTLEEL
Sbjct: 121 TPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGSGNVKKGEKKTLEEL 180

Query: 181 RAERLKREQKEKGRERALIAERSRKSGIASREGDPSSRR 220
           RAERLKREQKEKGRERALIAERSRKSGIASREGDPSSRR
Sbjct: 181 RAERLKREQKEKGRERALIAERSRKSGIASREGDPSSRR 219

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BLAST of CsGy5G004130 vs. NCBI nr
Match: XP_022922309.1 (leukocyte receptor cluster member 1 homolog [Cucurbita moschata] >XP_022922310.1 leukocyte receptor cluster member 1 homolog [Cucurbita moschata] >XP_022922311.1 leukocyte receptor cluster member 1 homolog [Cucurbita moschata] >XP_022922313.1 leukocyte receptor cluster member 1 homolog [Cucurbita moschata])

HSP 1 Score: 335.1 bits (858), Expect = 2.7e-88
Identity = 187/219 (85.39%), Postives = 199/219 (90.87%), Query Frame = 0 

Query: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEXXXXXXXXXKRDAEFRLEQLRTAR 60
           MGGHGGLNILPQKRWNVYNYENREKV+RDEEAAA  XXXXXXXXXKRDAEFRLEQLRTAR
Sbjct: 1   MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAXXXXXXXXXXXKRDAEFRLEQLRTAR 60

Query: 61  GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKRVI 120
           G+APVIDT+KPVETDLKPGH+NLFEGIKIFDP+K S+N G EDGSKKKRMK+EEVEKRVI
Sbjct: 61  GIAPVIDTTKPVETDLKPGHLNLFEGIKIFDPVKSSENEGGEDGSKKKRMKREEVEKRVI 120

Query: 121 TPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGSGNVKKGEKKTLEEL 180
           T EDEKYKLGYGVAGKGVK+PWYLER +K DD E+ +ND S RV S N+KKG KKTLEEL
Sbjct: 121 TAEDEKYKLGYGVAGKGVKLPWYLERRSK-DDAESDQNDSSPRVVSENIKKGGKKTLEEL 180

Query: 181 RAERLKREQKEKGRERALIAERSRKSGIASREGDPSSRR 220
           RAERLKREQKEKGRERALIAERS KSG  SRE D SSRR
Sbjct: 181 RAERLKREQKEKGRERALIAERSGKSGTTSRERDSSSRR 218

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BLAST of CsGy5G004130 vs. NCBI nr
Match: XP_023550759.1 (leukocyte receptor cluster member 1 homolog [Cucurbita pepo subsp. pepo] >XP_023550760.1 leukocyte receptor cluster member 1 homolog [Cucurbita pepo subsp. pepo] >XP_023550761.1 leukocyte receptor cluster member 1 homolog [Cucurbita pepo subsp. pepo] >XP_023550762.1 leukocyte receptor cluster member 1 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 317.8 bits (813), Expect = 4.5e-83
Identity = 181/219 (82.65%), Postives = 191/219 (87.21%), Query Frame = 0 

Query: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEXXXXXXXXXKRDAEFRLEQLRTAR 60
           MGGHGGLNILPQKRWNVYNYENREKV+RDEEAAA  XXXXXXXXXKRDAEFRLEQLRTAR
Sbjct: 1   MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAXXXXXXXXXXXKRDAEFRLEQLRTAR 60

Query: 61  GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKRVI 120
           G+APVIDT+KPVETDLKPGH+NLFEGIKIFDP+K S+N G EDGS         VEKRVI
Sbjct: 61  GIAPVIDTTKPVETDLKPGHLNLFEGIKIFDPVKSSENEGGEDGSXXXXXXXXXVEKRVI 120

Query: 121 TPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGSGNVKKGEKKTLEEL 180
           T EDEKYKLGYGVAGKGVK+PWYLER +K DD E+ +ND S RV S NVKKG KKTLEEL
Sbjct: 121 TAEDEKYKLGYGVAGKGVKLPWYLERRSK-DDAESDQNDSSSRVVSENVKKGGKKTLEEL 180

Query: 181 RAERLKREQKEKGRERALIAERSRKSGIASREGDPSSRR 220
           RAERLKREQKEKGRERALIAERS KSG ASRE D SSRR
Sbjct: 181 RAERLKREQKEKGRERALIAERSGKSGTASRERDSSSRR 218

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BLAST of CsGy5G004130 vs. NCBI nr
Match: XP_022969724.1 (leukocyte receptor cluster member 1 homolog [Cucurbita maxima] >XP_022969725.1 leukocyte receptor cluster member 1 homolog [Cucurbita maxima] >XP_022969726.1 leukocyte receptor cluster member 1 homolog [Cucurbita maxima] >XP_022969727.1 leukocyte receptor cluster member 1 homolog [Cucurbita maxima])

HSP 1 Score: 314.7 bits (805), Expect = 3.8e-82
Identity = 180/219 (82.19%), Postives = 190/219 (86.76%), Query Frame = 0 

Query: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEXXXXXXXXXKRDAEFRLEQLRTAR 60
           MGGHGGLNILPQKRWNVYNYENREKV+RDEEAAA  XXXXXXXXXKRDAEFRLEQLRTAR
Sbjct: 1   MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAXXXXXXXXXXXKRDAEFRLEQLRTAR 60

Query: 61  GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKRVI 120
           G+APVIDT+KPVETDLKPGH+NLFEGIKIFDP+K S+N G EDGS         VEKRVI
Sbjct: 61  GIAPVIDTTKPVETDLKPGHLNLFEGIKIFDPVKSSENEGGEDGSXXXXXXXXXVEKRVI 120

Query: 121 TPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGSGNVKKGEKKTLEEL 180
           T EDEKYKLGYGVAGKGVK+PWYLER +K DD E+ +N  S RV S NVKKG KKTLEEL
Sbjct: 121 TAEDEKYKLGYGVAGKGVKLPWYLERRSK-DDAESDQNASSSRVVSENVKKGGKKTLEEL 180

Query: 181 RAERLKREQKEKGRERALIAERSRKSGIASREGDPSSRR 220
           RAERLKREQKEKGRERALIAERS KSG ASRE D SSRR
Sbjct: 181 RAERLKREQKEKGRERALIAERSGKSGTASRERDSSSRR 218

[Close]
BLAST of CsGy5G004130 vs. NCBI nr
Match: XP_008437093.1 (PREDICTED: leukocyte receptor cluster member 1 homolog [Cucumis melo] >XP_008437094.1 PREDICTED: leukocyte receptor cluster member 1 homolog [Cucumis melo] >XP_008437095.1 PREDICTED: leukocyte receptor cluster member 1 homolog [Cucumis melo])

HSP 1 Score: 300.8 bits (769), Expect = 5.6e-78
Identity = 174/219 (79.45%), Postives = 177/219 (80.82%), Query Frame = 0 

Query: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEXXXXXXXXXKRDAEFRLEQLRTAR 60
           MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAA  XXXXXXXXX    EFRLEQLRTAR
Sbjct: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAXXXXXXXXXXXXXXXEFRLEQLRTAR 60

Query: 61  GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKRVI 120
           GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGS            +VI
Sbjct: 61  GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSXXXXXXXXXXXXKVI 120

Query: 121 TPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGSGNVKKGEKKTLEEL 180
           TPEDEKYKLGYGVAGKGVKMPWYLERP+K DDTETGENDGS RVG+GN            
Sbjct: 121 TPEDEKYKLGYGVAGKGVKMPWYLERPSK-DDTETGENDGSSRVGNGNXXXXXXXXXXXX 180

Query: 181 RAERLKREQKEKGRERALIAERSRKSGIASREGDPSSRR 220
                    KEKGRERALIAERSRKSGIASREGD SSRR
Sbjct: 181 XXXXXXXXXKEKGRERALIAERSRKSGIASREGDSSSRR 218

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BLAST of CsGy5G004130 vs. TAIR10
Match: AT4G16530.1 (Family of unknown function (DUF577))

HSP 1 Score: 132.9 bits (333), Expect = 3.7e-31
Identity = 104/250 (41.60%), Postives = 129/250 (51.60%), Query Frame = 0 

Query: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEXXXXXXXXXKRDAEFRLEQLRTAR 60
           MGGHGGLNILPQKRWNVYN++NREKV+++       XXXXXXXXX       LE LR  R
Sbjct: 552 MGGHGGLNILPQKRWNVYNFDNREKVRKEXXXXXXXXXXXXXXXXXXXXXXXLEVLRNVR 611

Query: 61  GLAPVIDTSKPVE-------------------------TDLKPGHINLFEGIKIFDPIKG 120
           GLAP+   S   E                          + K GHINLFEGI+IFDPI+ 
Sbjct: 612 GLAPLKRASPEAEKGKDEAVVAAAVVKSTAVVVESVESEEPKTGHINLFEGIRIFDPIEI 671

Query: 121 SDNGGVEDGSKKKRMKKEEVEKRVI------------TPEDEKYKLGYGVAGKGVKMPWY 180
             N    D                              P++EKY+LGYGVAGKGVK PWY
Sbjct: 672 KKNDKPADXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDPDEEKYRLGYGVAGKGVKRPWY 731

Query: 181 LERPTKDDDTETGEND--GSLRVGSGNVKKGEKKTLEELRAERLKREQKEKGRERALIAE 212
           LE+   ++D+  GE+D  G     +   K   KK+L+ELR ER         RERAL  +
Sbjct: 732 LEKRNDENDSVRGEDDDGGCGGYEAKKKKMSGKKSLKELREERXXXXXXXXERERALFMK 791

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BLAST of CsGy5G004130 vs. Swiss-Prot
Match: sp|Q96BZ8|LENG1_HUMAN (Leukocyte receptor cluster member 1 OS=Homo sapiens OX=9606 GN=LENG1 PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 7.4e-05
Identity = 73/243 (30.04%), Postives = 108/243 (44.44%), Query Frame = 0 

Query: 7   LNILPQKRWNVYNYENREKVKRDEEAAAKEXXXXXXXXXKRDAEFRLEQLRTARGLAPVI 66
           +NILP+K W+V N +N  +V+RDE  A   XXXXXX       E R E LR        +
Sbjct: 1   MNILPKKSWHVRNKDNVARVRRDEAQAXXXXXXXXXRVLLAQQEARTEFLRKKARHQNSL 60

Query: 67  DTSKPVETDLK-PGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKR--VITPE 126
              +  E      G ++LF   ++ +  KG   G  ++  ++KR +KE  EK   ++T  
Sbjct: 61  PELEAAEAGAPGSGPVDLFR--ELLEEGKGVIRGN-KEYEEEKRQEKERQEKALGILT-- 120

Query: 127 DEKYKLGYGVAGKGVKMPWYL---------ERPTKDDDTET------------------G 186
                LG   A    + PWY            P  D+  ++                  G
Sbjct: 121 ----YLGQSAAEAQTQPPWYQLPPGRGGPPPGPAPDEKIKSRLDPLREMQKHLGKKRQHG 180

Query: 187 ENDGSL----RVGSGNVKKGEKKTLEELRAERLKREQKEKGRERALIAERSRKSGIASRE 216
            ++GS     + GS   +  E  +L++LRAERL+RE  E+ R  AL+A   R  G A +E
Sbjct: 181 GDEGSRSRKEKEGSEKQRPKEPPSLDQLRAERLRREAAERSRAEALLA---RVQGRALQE 231

[Close]
BLAST of CsGy5G004130 vs. TrEMBL
Match: tr|A0A0A0KKV3|A0A0A0KKV3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G161970 PE=4 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 1.4e-109
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0 

Query: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEXXXXXXXXXKRDAEFRLEQLRTAR 60
           MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEXXXXXXXXXKRDAEFRLEQLRTAR
Sbjct: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEXXXXXXXXXKRDAEFRLEQLRTAR 60

Query: 61  GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKRVI 120
           GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKRVI
Sbjct: 61  GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKRVI 120

Query: 121 TPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGSGNVKKGEKKTLEEL 180
           TPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGSGNVKKGEKKTLEEL
Sbjct: 121 TPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGSGNVKKGEKKTLEEL 180

Query: 181 RAERLKREQKEKGRERALIAERSRKSGIASREGDPSSRR 220
           RAERLKREQKEKGRERALIAERSRKSGIASREGDPSSRR
Sbjct: 181 RAERLKREQKEKGRERALIAERSRKSGIASREGDPSSRR 219

[Close]
BLAST of CsGy5G004130 vs. TrEMBL
Match: tr|A0A1S3AT65|A0A1S3AT65_CUCME (leukocyte receptor cluster member 1 homolog OS=Cucumis melo OX=3656 GN=LOC103482616 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 3.7e-78
Identity = 174/219 (79.45%), Postives = 177/219 (80.82%), Query Frame = 0 

Query: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEXXXXXXXXXKRDAEFRLEQLRTAR 60
           MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAA  XXXXXXXXX    EFRLEQLRTAR
Sbjct: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAXXXXXXXXXXXXXXXEFRLEQLRTAR 60

Query: 61  GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKRVI 120
           GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGS            +VI
Sbjct: 61  GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSXXXXXXXXXXXXKVI 120

Query: 121 TPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGSGNVKKGEKKTLEEL 180
           TPEDEKYKLGYGVAGKGVKMPWYLERP+K DDTETGENDGS RVG+GN            
Sbjct: 121 TPEDEKYKLGYGVAGKGVKMPWYLERPSK-DDTETGENDGSSRVGNGNXXXXXXXXXXXX 180

Query: 181 RAERLKREQKEKGRERALIAERSRKSGIASREGDPSSRR 220
                    KEKGRERALIAERSRKSGIASREGD SSRR
Sbjct: 181 XXXXXXXXXKEKGRERALIAERSRKSGIASREGDSSSRR 218

[Close]
BLAST of CsGy5G004130 vs. TrEMBL
Match: tr|A0A2H5Q1R6|A0A2H5Q1R6_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_188150 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 2.7e-52
Identity = 123/224 (54.91%), Postives = 146/224 (65.18%), Query Frame = 0 

Query: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEXXXXXXXXXKRDAEFRLEQLRTAR 60
           MGGHGGLNILPQKRWNVYNYENREKV++DEEAAA+E         KRDAEFRLE+LR +R
Sbjct: 1   MGGHGGLNILPQKRWNVYNYENREKVRKDEEAAAREEQLQREQARKRDAEFRLERLRASR 60

Query: 61  GLAPVIDTSKPV------------ETDLKPGHINLFEGIKIFDPIK-----GSDNGGVED 120
           GLAP+    +PV            E+  K  HINLFEGIKIFDP+K     G      +D
Sbjct: 61  GLAPLTQAPEPVKETSEEPVTETDESGSKSNHINLFEGIKIFDPVKLEEKEGKGRSTEKD 120

Query: 121 GSKKKRMKKEEV--EKRVITPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGS 180
           G K+K+M+KEEV    +V+ PEDEKY+LGYGVAGKGVK+PWYLE+ +  D+         
Sbjct: 121 GFKRKKMRKEEVASSAKVVMPEDEKYRLGYGVAGKGVKLPWYLEKRSNHDENHXXXXXXE 180

Query: 181 LRVGSGNVKKGEKKTLEELRAERLKREQKEKGRERALIAERSRK 206
                   K G KKTL+ELR ERLK       RERALI E+SR+
Sbjct: 181 STKVRDEGKNGGKKTLQELREERLKXXXXXXXRERALIMEKSRR 224

[Close]
BLAST of CsGy5G004130 vs. TrEMBL
Match: tr|A0A2R6QJY8|A0A2R6QJY8_ACTCH (Leukocyte receptor cluster member like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc16743 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 4.6e-52
Identity = 133/224 (59.38%), Postives = 155/224 (69.20%), Query Frame = 0 

Query: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEXXXXXXXXXKRDAEFRLEQLRTAR 60
           MGGHGGLNILPQKRWNVYNY+NREKVKRDEEAAAK XXXXXXXXXKRDAEFRL+ LR +R
Sbjct: 1   MGGHGGLNILPQKRWNVYNYDNREKVKRDEEAAAKXXXXXXXXXXKRDAEFRLDLLRQSR 60

Query: 61  GLAPVID--TSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVED--GSKKKRMKKEEVE 120
           GLA      +S   E   K  HINLFEGIKIFDP+ G +  G ++  G KK +M K+E  
Sbjct: 61  GLATPAQAPSSSESEPKSKSNHINLFEGIKIFDPVGGVEGKGDDERGGFKKMKMAKKEAA 120

Query: 121 KRVITPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGSGNVKKGEKKT 180
            RV+TPEDEKY+LGYG+AGKGVK+PWYL RP+  DD  + E D   RVG G  K G KKT
Sbjct: 121 PRVVTPEDEKYRLGYGIAGKGVKLPWYLARPS--DDGNSNEEDFKYRVGKGGDKSGGKKT 180

Query: 181 LEELRAERLKREQKEKGRERALIAERSRKSGIASREGDPSSRRR 221
           +E+LR             ERAL+ E+ R+ G A +    S R R
Sbjct: 181 VEQLRXXXXXXXXXXXXXERALMVEKGRRDGAALKNRGFSRRDR 222

[Close]
BLAST of CsGy5G004130 vs. TrEMBL
Match: tr|A0A1Q3CE81|A0A1Q3CE81_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_22005 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 3.0e-51
Identity = 136/217 (62.67%), Postives = 158/217 (72.81%), Query Frame = 0 

Query: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEXXXXXXXXXKRDAEFRLEQLRTAR 60
           MGGHGGLNILPQKRWNVYN++NREKV++DEEAAA  XXXXXXXXX        EQLR AR
Sbjct: 1   MGGHGGLNILPQKRWNVYNFDNREKVRKDEEAAAXXXXXXXXXXXXXXXXXXXEQLRVAR 60

Query: 61  GLAP----VIDTSKPVETDLKPGHINLFEGIKIFDPIKG--SDNGGVEDGSKKKRMKKEE 120
           GLAP       T + VE + +  HINLFEGIKIFDPIKG  SD    ++G+K+K+MKKEE
Sbjct: 61  GLAPKKQAEEQTVEAVEGEPRSNHINLFEGIKIFDPIKGLESDASTEKEGNKRKKMKKEE 120

Query: 121 VEKRVITPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGSGNVKKGEK 180
           V  RV+ PEDEKY+LGYG+AGKGVK+PWYLE+   D D E+ E+ G  R      KK  K
Sbjct: 121 V--RVVGPEDEKYRLGYGIAGKGVKLPWYLEK-RSDGDLESEEDAGLSRGVKEERKKSGK 180

Query: 181 KTLEELRAERLKREQKEKGRERALIAERSRKSGIASR 212
           KTLEELR ERLKRE+ EK RE ALI E+SR+    SR
Sbjct: 181 KTLEELREERLKREKWEKEREHALIMEKSRRDRGFSR 214

The following BLAST results are available for this feature:
BLAST of CsGy5G004130 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004152406.12.1e-109100.00PREDICTED: leukocyte receptor cluster member 1 homolog [Cucumis sativus] >XP_011... [more]
XP_022922309.12.7e-8885.39leukocyte receptor cluster member 1 homolog [Cucurbita moschata] >XP_022922310.1... [more]
XP_023550759.14.5e-8382.65leukocyte receptor cluster member 1 homolog [Cucurbita pepo subsp. pepo] >XP_023... [more]
XP_022969724.13.8e-8282.19leukocyte receptor cluster member 1 homolog [Cucurbita maxima] >XP_022969725.1 l... [more]
XP_008437093.15.6e-7879.45PREDICTED: leukocyte receptor cluster member 1 homolog [Cucumis melo] >XP_008437... [more]
BLAST of CsGy5G004130 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G16530.13.7e-3141.60Family of unknown function (DUF577)[more]
BLAST of CsGy5G004130 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q96BZ8|LENG1_HUMAN7.4e-0530.04Leukocyte receptor cluster member 1 OS=Homo sapiens OX=9606 GN=LENG1 PE=1 SV=1[more]
BLAST of CsGy5G004130 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KKV3|A0A0A0KKV3_CUCSA1.4e-109100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G161970 PE=4 SV=1[more]
tr|A0A1S3AT65|A0A1S3AT65_CUCME3.7e-7879.45leukocyte receptor cluster member 1 homolog OS=Cucumis melo OX=3656 GN=LOC103482... [more]
tr|A0A2H5Q1R6|A0A2H5Q1R6_CITUN2.7e-5254.91Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_188150 PE=4 SV=1[more]
tr|A0A2R6QJY8|A0A2R6QJY8_ACTCH4.6e-5259.38Leukocyte receptor cluster member like OS=Actinidia chinensis var. chinensis OX=... [more]
tr|A0A1Q3CE81|A0A1Q3CE81_CEPFO3.0e-5162.67Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_22005 PE=4... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR019339CIR_N_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G004130.1CsGy5G004130.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 27..59
NoneNo IPR availableCOILSCoilCoilcoord: 170..190
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..222
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 168..218
NoneNo IPR availablePANTHERPTHR22093LEUKOCYTE RECEPTOR CLUSTER LRC MEMBER 1coord: 7..155
IPR019339CBF1-interacting co-repressor CIR, N-terminal domainSMARTSM01083Cir_N_3coord: 14..50
e-value: 8.6E-4
score: 28.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy5G004130Cla011581Watermelon (97103) v1cgybwmB381
CsGy5G004130Csa5G161970Cucumber (Chinese Long) v2cgybcuB224
CsGy5G004130MELO3C005537Melon (DHL92) v3.5.1cgybmeB298
CsGy5G004130ClCG01G004000Watermelon (Charleston Gray)cgybwcgB332
CsGy5G004130CSPI05G06780Wild cucumber (PI 183967)cgybcpiB226
CsGy5G004130CmaCh15G011260Cucurbita maxima (Rimu)cgybcmaB608
CsGy5G004130Cp4.1LG13g02320Cucurbita pepo (Zucchini)cgybcpeB597
CsGy5G004130MELO3C005537.2Melon (DHL92) v3.6.1cgybmedB298
CsGy5G004130CsaV3_5G004180Cucumber (Chinese Long) v3cgybcucB232
CsGy5G004130Cla97C01G004170Watermelon (97103) v2cgybwmbB319
CsGy5G004130Bhi12G000414Wax gourdcgybwgoB414
CsGy5G004130Carg23208Silver-seed gourdcarcgybB0549
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy5G004130Watermelon (97103) v2cgybwmbB339
CsGy5G004130Cucumber (Gy14) v2cgybcgybB090
CsGy5G004130Cucurbita maxima (Rimu)cgybcmaB640
CsGy5G004130Cucurbita maxima (Rimu)cgybcmaB695
CsGy5G004130Cucurbita moschata (Rifu)cgybcmoB583
CsGy5G004130Cucurbita moschata (Rifu)cgybcmoB619
CsGy5G004130Cucurbita moschata (Rifu)cgybcmoB675
CsGy5G004130Cucurbita pepo (Zucchini)cgybcpeB687
CsGy5G004130Cucurbita pepo (Zucchini)cgybcpeB702
CsGy5G004130Cucumber (Chinese Long) v2cgybcuB211
CsGy5G004130Bottle gourd (USVL1VR-Ls)cgyblsiB294
CsGy5G004130Bottle gourd (USVL1VR-Ls)cgyblsiB352
CsGy5G004130Melon (DHL92) v3.5.1cgybmeB348
CsGy5G004130Watermelon (Charleston Gray)cgybwcgB326
CsGy5G004130Watermelon (97103) v1cgybwmB348
CsGy5G004130Wild cucumber (PI 183967)cgybcpiB212
CsGy5G004130Silver-seed gourdcarcgybB0911