CsGy5G004110 (gene) Cucumber (Gy14) v2

Overview
NameCsGy5G004110
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionAutophagy-related protein
LocationChr5 : 2751540 .. 2753652 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATATCCCGATAGAATTCCTGTAAGAAATGAATTTATTTTGTTACCGTGATTTGATTGGCTATTGGTTATTATCAACTTTAAATTCAGAATCTCAGAATTTGTTTTGCCAAAGCGTTGATGTTATTGTTCTTTTTAACTTCCTCTGATTGATGAATGAGTCGAATTTTTTCTGAATTTCCTTATCATCCATTGCCAGTATCCTTTTTCTTTCGTATTCATTTGGTAAGGAAGCAATCAGTTATTATTATTATTTTTTAGTTCAACGACATATGGTTGACAAGAAACTATCAGTTATTGATAATGTTGTCTTTGATTTCTTTCTGGACAACAGACGGTGATGATTATGTTGTTACTGATTTGATTTAGCAAGGGGGTTGTGTATAAGCAGTAGAGAGGAAGTGTGTTTTAAGAATAAAATGTCTCAAAATGAAGGCATCTGTTGTATTTTTGTTTGCGCACATGTTTCAGCATTTCATCAGTTACTGCTTGGTTATATAATCATGTTCTTATTGTTTCAAGGTTATTGTGGAGAAGGCAGAGAGAAGTGACATCCCTAGCATTGATAAGAAGAAGTAAGTACACCGACATTCATTTTGTAGTTATTCGTTGTAGTTATCTTTTCTTTTATGTAGATGTATATCAATTAAAGTCGGAGGAAACTTTGAAGAAATATTATTTAGGGAAGTATTCTGTGTTCAACTCTTTTTCATCTAAGGAAACATAGCTACTGGTAGCTGAGAATTGAATTTTCTTTCTTCTATGTTAGAATTTATGTTCAATGATAGACTGTTTTTCGTTATCTTTTCTCTTTTTGTCTTTTGATTGATGTTCGATGAGCTGAACACGCAAGCAGTCTTACTGGAAGCTCTTTTTCATCTCTTTGAAAGTGGCGTTTATTTAACTTTTAAAATTATGTTCCTGTTTTCTTCTCATAGTTCTGTTGTCTATTTGCTTTATATATACAATTCATTTCAAAACCACAAGGGGAAAATGACCAATTGACAATCCTTCACCTCTTTCTCTTTCTATACCTAAGATTTTGATGTAATGACTGCAGATACCTAGTTCCTGCAGACCTTACTGTGGGACAGTTCGTTTATGTCATTCGTAAAAGGATTAAATTGAGCCCGGAGAAAGCGATCTTTATCTTCGTGGACAATGTCCTCCCTCCTACAGGTACAGCCTTTTCTTCTATAACATATTGGAGGGTATGTTTAGGACCACTTGAAAATGAAAGGCCGTCCCATAAACAAGTTCATTTAACAGATTTCGGTAACGATCATATCAATAATGTTGATTATGATCTATCATAAACGCCACACAGTTTTGACATAATGGGTACACATGGCACCTCAAATAACAATTATATCAAAGATAGCAGAAAATTTAATGAAAGGTCATGTTCAAAATTTCAAAAACTATATCGGTTTTATATGCAAGGATCAAGATCTATAACTTGTTGTATCCAACTTGCCTAAACAAACCACTTATTTTTTTCCTTGTTAAGGAGCAATCATGTCTGCAATATATGAAGAGAAGAAGGATGAAGATGGATTTCTGTATGTTACTTACAGTGGAGAGAACACATTTGGGTGGTAGCTGGCTTGTGTGGTAGACCTGATTGTTCTTAGATTTTCACTTCATTGCTATTGTCGCGGCCGTCGTTGTAGTCATCTTCCACTGTTCTCTCTGCCTCTTCCTTTTGCTGCTCCTTGTTCTTCCAGTTCTTCAAGGATTCTGGCAAGTGATACATTCTGTACAGCTCTACATAATGAATAAAATTTGTGAAAACATTTCCACGCCAAAAAGTTATTAATTGCTTCCAATATTGCTTTTATAATTCCTTTTGCCCCAAATTTTTTATGGGGTTTTTTTCTTCTGTTTATTGTAAAGATAAAATCTCTTACAAAAAAATCGTTTTTACTCATTAAAAAGATATTCCATCTACTCTTATAATAACCTCCCTAATATTATTCTCATTTCTATATTCTTTTTCTAACCTTCTACCATTTTTCTTCAACTTATATTCACTTCTATGTTTAAGTTTATGACTTTATTGACATAGAGATCATTAAACTATTACTATTATTCATTGTGAAATGAACTTCCCC

mRNA sequence

AAATATCCCGATAGAATTCCTGTAAGAAATGAATTTATTTTGTTACCGTGATTTGATTGGCTATTGGTTATTATCAACTTTAAATTCAGAATCTCAGAATTTGTTTTGCCAAAGCGTTGATGTTATTGTTCTTTTTAACTTCCTCTGATTGATGAATGAGTCGAATTTTTTCTGAATTTCCTTATCATCCATTGCCAGTATCCTTTTTCTTTCGTATTCATTTGGTTATTGTGGAGAAGGCAGAGAGAAGTGACATCCCTAGCATTGATAAGAAGAAATACCTAGTTCCTGCAGACCTTACTGTGGGACAGTTCGTTTATGTCATTCGTAAAAGGATTAAATTGAGCCCGGAGAAAGCGATCTTTATCTTCGTGGACAATGTCCTCCCTCCTACAGGAGCAATCATGTCTGCAATATATGAAGAGAAGAAGGATGAAGATGGATTTCTGTATGTTACTTACAGTGGAGAGAACACATTTGGGTGGTAGCTGGCTTGTGTGGTAGACCTGATTGTTCTTAGATTTTCACTTCATTGCTATTGTCGCGGCCGTCGTTGTAGTCATCTTCCACTGTTCTCTCTGCCTCTTCCTTTTGCTGCTCCTTGTTCTTCCAGTTCTTCAAGGATTCTGGCAAGTGATACATTCTGTACAGCTCTACATAATGAATAAAATTTGTGAAAACATTTCCACGCCAAAAAGTTATTAATTGCTTCCAATATTGCTTTTATAATTCCTTTTGCCCCAAATTTTTTATGGGGTTTTTTTCTTCTGTTTATTGTAAAGATAAAATCTCTTACAAAAAAATCGTTTTTACTCATTAAAAAGATATTCCATCTACTCTTATAATAACCTCCCTAATATTATTCTCATTTCTATATTCTTTTTCTAACCTTCTACCATTTTTCTTCAACTTATATTCACTTCTATGTTTAAGTTTATGACTTTATTGACATAGAGATCATTAAACTATTACTATTATTCATTGTGAAATGAACTTCCCC

Coding sequence (CDS)

ATGAGTCGAATTTTTTCTGAATTTCCTTATCATCCATTGCCAGTATCCTTTTTCTTTCGTATTCATTTGGTTATTGTGGAGAAGGCAGAGAGAAGTGACATCCCTAGCATTGATAAGAAGAAATACCTAGTTCCTGCAGACCTTACTGTGGGACAGTTCGTTTATGTCATTCGTAAAAGGATTAAATTGAGCCCGGAGAAAGCGATCTTTATCTTCGTGGACAATGTCCTCCCTCCTACAGGAGCAATCATGTCTGCAATATATGAAGAGAAGAAGGATGAAGATGGATTTCTGTATGTTACTTACAGTGGAGAGAACACATTTGGGTGGTAG

Protein sequence

MSRIFSEFPYHPLPVSFFFRIHLVIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGW
Homology
[Close]
BLAST of CsGy5G004110 vs. NCBI nr
Match: XP_004152407.1 (PREDICTED: autophagy-related protein 8f [Cucumis sativus] >XP_004152408.1 PREDICTED: autophagy-related protein 8f [Cucumis sativus] >XP_008437098.1 PREDICTED: autophagy-related protein 8f [Cucumis melo] >KGN50246.1 hypothetical protein Csa_5G161950 [Cucumis sativus])

HSP 1 Score: 177.6 bits (449), Expect = 2.4e-41
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0 

Query: 24  VIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAI 83
           VIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAI
Sbjct: 32  VIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAI 91

Query: 84  MSAIYEEKKDEDGFLYVTYSGENTFGW 111
           MSAIYEEKKDEDGFLYVTYSGENTFGW
Sbjct: 92  MSAIYEEKKDEDGFLYVTYSGENTFGW 118

[Close]
BLAST of CsGy5G004110 vs. NCBI nr
Match: XP_022995853.1 (autophagy-related protein 8f-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 174.5 bits (441), Expect = 2.0e-40
Identity = 87/93 (93.55%), Postives = 88/93 (94.62%), Query Frame = 0 

Query: 18  FFRIHLVIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVL 77
           FF    VIVEKAE SDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVL
Sbjct: 5   FFPKTWVIVEKAENSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVL 64

Query: 78  PPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGW 111
           PPTGAIMSAIYEEKKDEDGFLYV+YSGENTFGW
Sbjct: 65  PPTGAIMSAIYEEKKDEDGFLYVSYSGENTFGW 97

[Close]
BLAST of CsGy5G004110 vs. NCBI nr
Match: XP_022995852.1 (autophagy-related protein 8f-like isoform X1 [Cucurbita maxima] >XP_023534014.1 autophagy-related protein 8f-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 174.1 bits (440), Expect = 2.6e-40
Identity = 85/87 (97.70%), Postives = 86/87 (98.85%), Query Frame = 0 

Query: 24  VIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAI 83
           VIVEKAE SDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAI
Sbjct: 32  VIVEKAENSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAI 91

Query: 84  MSAIYEEKKDEDGFLYVTYSGENTFGW 111
           MSAIYEEKKDEDGFLYV+YSGENTFGW
Sbjct: 92  MSAIYEEKKDEDGFLYVSYSGENTFGW 118

[Close]
BLAST of CsGy5G004110 vs. NCBI nr
Match: XP_022154834.1 (autophagy-related protein 8f [Momordica charantia] >XP_022154835.1 autophagy-related protein 8f [Momordica charantia])

HSP 1 Score: 173.7 bits (439), Expect = 3.4e-40
Identity = 86/87 (98.85%), Postives = 87/87 (100.00%), Query Frame = 0 

Query: 24  VIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAI 83
           VIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAI
Sbjct: 32  VIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAI 91

Query: 84  MSAIYEEKKDEDGFLYVTYSGENTFGW 111
           MSAIYEEKKDEDGFLYVTYSGENTFG+
Sbjct: 92  MSAIYEEKKDEDGFLYVTYSGENTFGF 118

[Close]
BLAST of CsGy5G004110 vs. NCBI nr
Match: XP_022922412.1 (autophagy-related protein 8f [Cucurbita moschata] >XP_023549494.1 autophagy-related protein 8f [Cucurbita pepo subsp. pepo])

HSP 1 Score: 173.7 bits (439), Expect = 3.4e-40
Identity = 86/87 (98.85%), Postives = 87/87 (100.00%), Query Frame = 0 

Query: 24  VIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAI 83
           VIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAI
Sbjct: 32  VIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAI 91

Query: 84  MSAIYEEKKDEDGFLYVTYSGENTFGW 111
           MSAIYEEKKDEDGFLYVTYSGENTFG+
Sbjct: 92  MSAIYEEKKDEDGFLYVTYSGENTFGF 118

[Close]
BLAST of CsGy5G004110 vs. TAIR10
Match: AT4G16520.1 (Ubiquitin-like superfamily protein)

HSP 1 Score: 162.9 bits (411), Expect = 1.1e-40
Identity = 78/87 (89.66%), Postives = 85/87 (97.70%), Query Frame = 0 

Query: 24  VIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAI 83
           VIVEKAE+SDIP+IDKKKYLVPADLTVGQFVYVIRKRIKLS EKAIFIFVDNVLPP GA+
Sbjct: 32  VIVEKAEKSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPAGAL 91

Query: 84  MSAIYEEKKDEDGFLYVTYSGENTFGW 111
           MS++YEEKKD+DGFLYVTYSGENTFG+
Sbjct: 92  MSSVYEEKKDDDGFLYVTYSGENTFGF 118

[Close]
BLAST of CsGy5G004110 vs. TAIR10
Match: AT2G45170.1 (AUTOPHAGY 8E)

HSP 1 Score: 159.1 bits (401), Expect = 1.6e-39
Identity = 74/86 (86.05%), Postives = 84/86 (97.67%), Query Frame = 0 

Query: 24  VIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAI 83
           VIVEKAE+S++P+IDKKKYLVP+DLTVGQFVYVIRKRIKLS EKAIFIFVDNVLPPTG +
Sbjct: 33  VIVEKAEKSEVPNIDKKKYLVPSDLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGEL 92

Query: 84  MSAIYEEKKDEDGFLYVTYSGENTFG 110
           MS++YE+KKDEDGFLY+TYSGENTFG
Sbjct: 93  MSSVYEDKKDEDGFLYITYSGENTFG 118

[Close]
BLAST of CsGy5G004110 vs. TAIR10
Match: AT3G60640.1 (Ubiquitin-like superfamily protein)

HSP 1 Score: 157.9 bits (398), Expect = 3.5e-39
Identity = 76/86 (88.37%), Postives = 83/86 (96.51%), Query Frame = 0 

Query: 24  VIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAI 83
           VIVEK+E+SDIP+IDKKKYLVPADLTVGQFVYVIRKRI+LS EKAIFIFVDNVLPPTGA+
Sbjct: 32  VIVEKSEKSDIPNIDKKKYLVPADLTVGQFVYVIRKRIQLSAEKAIFIFVDNVLPPTGAM 91

Query: 84  MSAIYEEKKDEDGFLYVTYSGENTFG 110
           MS IY+E K+EDGFLYVTYSGENTFG
Sbjct: 92  MSTIYDENKEEDGFLYVTYSGENTFG 117

[Close]
BLAST of CsGy5G004110 vs. TAIR10
Match: AT2G05630.2 (Ubiquitin-like superfamily protein)

HSP 1 Score: 157.1 bits (396), Expect = 6.0e-39
Identity = 74/86 (86.05%), Postives = 82/86 (95.35%), Query Frame = 0 

Query: 24  VIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAI 83
           VIVE+AE+SD+P ID+KKYLVPADLTVGQFVYV+RKRIKLSPEKAIFIFV N+LPPT AI
Sbjct: 76  VIVERAEKSDVPDIDRKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAI 135

Query: 84  MSAIYEEKKDEDGFLYVTYSGENTFG 110
           MSAIYEE KDEDGFLY++YSGENTFG
Sbjct: 136 MSAIYEEHKDEDGFLYMSYSGENTFG 161

[Close]
BLAST of CsGy5G004110 vs. TAIR10
Match: AT1G62040.2 (Ubiquitin-like superfamily protein)

HSP 1 Score: 154.8 bits (390), Expect = 3.0e-38
Identity = 73/86 (84.88%), Postives = 81/86 (94.19%), Query Frame = 0 

Query: 24  VIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAI 83
           VIVE+AERSD+P+IDKKKYLVPADLTVGQFVYV+RKRIKLS EKAIF+FV N LPPT A+
Sbjct: 46  VIVERAERSDVPNIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTAAM 105

Query: 84  MSAIYEEKKDEDGFLYVTYSGENTFG 110
           MSAIY+E KDEDGFLY+TYSGENTFG
Sbjct: 106 MSAIYDENKDEDGFLYMTYSGENTFG 131

[Close]
BLAST of CsGy5G004110 vs. Swiss-Prot
Match: sp|Q8VYK7|ATG8F_ARATH (Autophagy-related protein 8f OS=Arabidopsis thaliana OX=3702 GN=ATG8F PE=1 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 2.0e-39
Identity = 78/87 (89.66%), Postives = 85/87 (97.70%), Query Frame = 0 

Query: 24  VIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAI 83
           VIVEKAE+SDIP+IDKKKYLVPADLTVGQFVYVIRKRIKLS EKAIFIFVDNVLPP GA+
Sbjct: 32  VIVEKAEKSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPAGAL 91

Query: 84  MSAIYEEKKDEDGFLYVTYSGENTFGW 111
           MS++YEEKKD+DGFLYVTYSGENTFG+
Sbjct: 92  MSSVYEEKKDDDGFLYVTYSGENTFGF 118

[Close]
BLAST of CsGy5G004110 vs. Swiss-Prot
Match: sp|A2XXR7|ATG8B_ORYSI (Autophagy-related protein 8B OS=Oryza sativa subsp. indica OX=39946 GN=ATG8B PE=3 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 7.5e-39
Identity = 78/86 (90.70%), Postives = 81/86 (94.19%), Query Frame = 0 

Query: 24  VIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAI 83
           VIVEKAERSDIP IDKKKYLVPADLTVGQFVYV+RKRIKLSPEKAIFIFV N LPPT A+
Sbjct: 32  VIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNTLPPTAAL 91

Query: 84  MSAIYEEKKDEDGFLYVTYSGENTFG 110
           MSAIYEE KDEDGFLY+TYSGENTFG
Sbjct: 92  MSAIYEENKDEDGFLYMTYSGENTFG 117

[Close]
BLAST of CsGy5G004110 vs. Swiss-Prot
Match: sp|Q7XPR1|ATG8B_ORYSJ (Autophagy-related protein 8B OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8B PE=3 SV=2)

HSP 1 Score: 161.0 bits (406), Expect = 7.5e-39
Identity = 78/86 (90.70%), Postives = 81/86 (94.19%), Query Frame = 0 

Query: 24  VIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAI 83
           VIVEKAERSDIP IDKKKYLVPADLTVGQFVYV+RKRIKLSPEKAIFIFV N LPPT A+
Sbjct: 32  VIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNTLPPTAAL 91

Query: 84  MSAIYEEKKDEDGFLYVTYSGENTFG 110
           MSAIYEE KDEDGFLY+TYSGENTFG
Sbjct: 92  MSAIYEENKDEDGFLYMTYSGENTFG 117

[Close]
BLAST of CsGy5G004110 vs. Swiss-Prot
Match: sp|Q8S926|ATG8E_ARATH (Autophagy-related protein 8e OS=Arabidopsis thaliana OX=3702 GN=ATG8E PE=1 SV=2)

HSP 1 Score: 159.1 bits (401), Expect = 2.9e-38
Identity = 74/86 (86.05%), Postives = 84/86 (97.67%), Query Frame = 0 

Query: 24  VIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAI 83
           VIVEKAE+S++P+IDKKKYLVP+DLTVGQFVYVIRKRIKLS EKAIFIFVDNVLPPTG +
Sbjct: 33  VIVEKAEKSEVPNIDKKKYLVPSDLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGEL 92

Query: 84  MSAIYEEKKDEDGFLYVTYSGENTFG 110
           MS++YE+KKDEDGFLY+TYSGENTFG
Sbjct: 93  MSSVYEDKKDEDGFLYITYSGENTFG 118

[Close]
BLAST of CsGy5G004110 vs. Swiss-Prot
Match: sp|A2YS06|ATG8C_ORYSI (Autophagy-related protein 8C OS=Oryza sativa subsp. indica OX=39946 GN=ATG8C PE=3 SV=2)

HSP 1 Score: 157.9 bits (398), Expect = 6.4e-38
Identity = 77/86 (89.53%), Postives = 80/86 (93.02%), Query Frame = 0 

Query: 24  VIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAI 83
           VIVEKAERSDIP IDKKKYLVPADLTVGQFVYV+RKRIKLS EKAIFIFV N LPPT A+
Sbjct: 32  VIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNTLPPTAAL 91

Query: 84  MSAIYEEKKDEDGFLYVTYSGENTFG 110
           MSAIYEE KDEDGFLY+TYSGENTFG
Sbjct: 92  MSAIYEENKDEDGFLYMTYSGENTFG 117

[Close]
BLAST of CsGy5G004110 vs. TrEMBL
Match: tr|A0A1S3ASU6|A0A1S3ASU6_CUCME (Autophagy-related protein OS=Cucumis melo OX=3656 GN=LOC103482618 PE=3 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.6e-41
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0 

Query: 24  VIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAI 83
           VIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAI
Sbjct: 32  VIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAI 91

Query: 84  MSAIYEEKKDEDGFLYVTYSGENTFGW 111
           MSAIYEEKKDEDGFLYVTYSGENTFGW
Sbjct: 92  MSAIYEEKKDEDGFLYVTYSGENTFGW 118

[Close]
BLAST of CsGy5G004110 vs. TrEMBL
Match: tr|A0A0A0KR95|A0A0A0KR95_CUCSA (Autophagy-related protein OS=Cucumis sativus OX=3659 GN=Csa_5G161950 PE=3 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.6e-41
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0 

Query: 24  VIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAI 83
           VIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAI
Sbjct: 32  VIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAI 91

Query: 84  MSAIYEEKKDEDGFLYVTYSGENTFGW 111
           MSAIYEEKKDEDGFLYVTYSGENTFGW
Sbjct: 92  MSAIYEEKKDEDGFLYVTYSGENTFGW 118

[Close]
BLAST of CsGy5G004110 vs. TrEMBL
Match: tr|A0A2P5PXD8|A0A2P5PXD8_GOSBA (Autophagy-related protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD36159 PE=3 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.5e-39
Identity = 90/111 (81.08%), Postives = 96/111 (86.49%), Query Frame = 0 

Query: 2   SRIFSEFPYH-PLPVSFFFRIH--LVIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIR 61
           +RI  ++P   P+P      I   +VIVEKAERSDIP+IDKKKYLVPADLTVGQFVYVIR
Sbjct: 20  ARIREKYPDRIPVPTRLLLPISICIVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIR 79

Query: 62  KRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 110
           KRIKLS EKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG
Sbjct: 80  KRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 130

[Close]
BLAST of CsGy5G004110 vs. TrEMBL
Match: tr|A0A2N9GGR1|A0A2N9GGR1_FAGSY (Autophagy-related protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26530 PE=3 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.5e-39
Identity = 85/86 (98.84%), Postives = 85/86 (98.84%), Query Frame = 0 

Query: 24  VIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAI 83
           VIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLS EKAIFIFVDNVLPPTGAI
Sbjct: 32  VIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAI 91

Query: 84  MSAIYEEKKDEDGFLYVTYSGENTFG 110
           MSAIYEEKKDEDGFLYVTYSGENTFG
Sbjct: 92  MSAIYEEKKDEDGFLYVTYSGENTFG 117

[Close]
BLAST of CsGy5G004110 vs. TrEMBL
Match: tr|A0A251RPR8|A0A251RPR8_HELAN (Autophagy-related protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr17g0549781 PE=3 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.5e-39
Identity = 82/87 (94.25%), Postives = 85/87 (97.70%), Query Frame = 0 

Query: 24  VIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAI 83
           VIVEKA+RSD+P+IDKKKYLVPADLTVGQFVYVIRKRIKLS EKAIFIFVDN LPPTGAI
Sbjct: 22  VIVEKADRSDVPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNALPPTGAI 81

Query: 84  MSAIYEEKKDEDGFLYVTYSGENTFGW 111
           MSAIYEEKKDEDGFLYVTYSGENTFGW
Sbjct: 82  MSAIYEEKKDEDGFLYVTYSGENTFGW 108

The following BLAST results are available for this feature:
BLAST of CsGy5G004110 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004152407.12.4e-41100.00PREDICTED: autophagy-related protein 8f [Cucumis sativus] >XP_004152408.1 PREDIC... [more]
XP_022995853.12.0e-4093.55autophagy-related protein 8f-like isoform X2 [Cucurbita maxima][more]
XP_022995852.12.6e-4097.70autophagy-related protein 8f-like isoform X1 [Cucurbita maxima] >XP_023534014.1 ... [more]
XP_022154834.13.4e-4098.85autophagy-related protein 8f [Momordica charantia] >XP_022154835.1 autophagy-rel... [more]
XP_022922412.13.4e-4098.85autophagy-related protein 8f [Cucurbita moschata] >XP_023549494.1 autophagy-rela... [more]
BLAST of CsGy5G004110 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G16520.11.1e-4089.66Ubiquitin-like superfamily protein[more]
AT2G45170.11.6e-3986.05AUTOPHAGY 8E[more]
AT3G60640.13.5e-3988.37Ubiquitin-like superfamily protein[more]
AT2G05630.26.0e-3986.05Ubiquitin-like superfamily protein[more]
AT1G62040.23.0e-3884.88Ubiquitin-like superfamily protein[more]
BLAST of CsGy5G004110 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8VYK7|ATG8F_ARATH2.0e-3989.66Autophagy-related protein 8f OS=Arabidopsis thaliana OX=3702 GN=ATG8F PE=1 SV=1[more]
sp|A2XXR7|ATG8B_ORYSI7.5e-3990.70Autophagy-related protein 8B OS=Oryza sativa subsp. indica OX=39946 GN=ATG8B PE=... [more]
sp|Q7XPR1|ATG8B_ORYSJ7.5e-3990.70Autophagy-related protein 8B OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8B P... [more]
sp|Q8S926|ATG8E_ARATH2.9e-3886.05Autophagy-related protein 8e OS=Arabidopsis thaliana OX=3702 GN=ATG8E PE=1 SV=2[more]
sp|A2YS06|ATG8C_ORYSI6.4e-3889.53Autophagy-related protein 8C OS=Oryza sativa subsp. indica OX=39946 GN=ATG8C PE=... [more]
BLAST of CsGy5G004110 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3ASU6|A0A1S3ASU6_CUCME1.6e-41100.00Autophagy-related protein OS=Cucumis melo OX=3656 GN=LOC103482618 PE=3 SV=1[more]
tr|A0A0A0KR95|A0A0A0KR95_CUCSA1.6e-41100.00Autophagy-related protein OS=Cucumis sativus OX=3659 GN=Csa_5G161950 PE=3 SV=1[more]
tr|A0A2P5PXD8|A0A2P5PXD8_GOSBA1.5e-3981.08Autophagy-related protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD36159 PE=3 ... [more]
tr|A0A2N9GGR1|A0A2N9GGR1_FAGSY2.5e-3998.84Autophagy-related protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26530 PE=3 SV=... [more]
tr|A0A251RPR8|A0A251RPR8_HELAN2.5e-3994.25Autophagy-related protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr17g0549781 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR029071Ubiquitin-like_domsf
IPR004241Atg8-like
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006914 autophagy
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G004110.1CsGy5G004110.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004241Autophagy protein Atg8 ubiquitin-likePFAMPF02991Atg8coord: 24..109
e-value: 1.4E-41
score: 140.8
IPR004241Autophagy protein Atg8 ubiquitin-likePANTHERPTHR10969MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATEDcoord: 24..109
IPR004241Autophagy protein Atg8 ubiquitin-likeCDDcd01611GABARAPcoord: 24..109
e-value: 1.40375E-52
score: 162.02
NoneNo IPR availableGENE3DG3DSA:3.10.20.90coord: 3..109
e-value: 1.1E-44
score: 153.2
NoneNo IPR availablePANTHERPTHR10969:SF39AUTOPHAGY-RELATED PROTEIN 8E-RELATEDcoord: 24..109
IPR029071Ubiquitin-like domain superfamilySUPERFAMILYSSF54236Ubiquitin-likecoord: 23..109

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy5G004110Cla011578Watermelon (97103) v1cgybwmB381
CsGy5G004110Csa5G161950Cucumber (Chinese Long) v2cgybcuB224
CsGy5G004110MELO3C005538Melon (DHL92) v3.5.1cgybmeB298
CsGy5G004110ClCG01G003980Watermelon (Charleston Gray)cgybwcgB332
CsGy5G004110CSPI05G06760Wild cucumber (PI 183967)cgybcpiB226
CsGy5G004110CmaCh15G011270Cucurbita maxima (Rimu)cgybcmaB608
CsGy5G004110CmaCh02G015440Cucurbita maxima (Rimu)cgybcmaB640
CsGy5G004110CmoCh15G011860Cucurbita moschata (Rifu)cgybcmoB583
CsGy5G004110Lsi09G004180Bottle gourd (USVL1VR-Ls)cgyblsiB294
CsGy5G004110Cp4.1LG13g02370Cucurbita pepo (Zucchini)cgybcpeB597
CsGy5G004110MELO3C005538.2Melon (DHL92) v3.6.1cgybmedB298
CsGy5G004110CsaV3_5G004160Cucumber (Chinese Long) v3cgybcucB232
CsGy5G004110Cla97C01G004150Watermelon (97103) v2cgybwmbB319
CsGy5G004110Bhi12G000412Wax gourdcgybwgoB414
CsGy5G004110Carg23209Silver-seed gourdcarcgybB0549
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy5G004110Cucumber (Gy14) v2cgybcgybB090
CsGy5G004110Cucurbita maxima (Rimu)cgybcmaB695
CsGy5G004110Cucurbita moschata (Rifu)cgybcmoB619
CsGy5G004110Cucurbita moschata (Rifu)cgybcmoB675
CsGy5G004110Cucurbita pepo (Zucchini)cgybcpeB687
CsGy5G004110Cucurbita pepo (Zucchini)cgybcpeB702
CsGy5G004110Cucumber (Chinese Long) v2cgybcuB211
CsGy5G004110Bottle gourd (USVL1VR-Ls)cgyblsiB352
CsGy5G004110Melon (DHL92) v3.5.1cgybmeB348
CsGy5G004110Watermelon (Charleston Gray)cgybwcgB326
CsGy5G004110Watermelon (97103) v1cgybwmB348
CsGy5G004110Wild cucumber (PI 183967)cgybcpiB212
CsGy5G004110Silver-seed gourdcarcgybB0911
CsGy5G004110Watermelon (97103) v2cgybwmbB339