CsGy5G004100 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy5G004100
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	L-lactate dehydrogenase
Location	Chr5 : 2747075 .. 2749720 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACCCAGCAGAACCAATGAAATGACCCTAAAGAATATTGACCGTTGAAAAATCTATGAAATAGACTTTCTCTTACACTTTCCTCATTCTTTCTATCCAACTTTCTTGAAAACTTTTCTTCTCCTTCTTCTTCATCCTTTCTAACGCAATCCCCATTCAGAATCCGCCAAGTTTCTCTGCAACAAAAATCTTCATCGCCAACCACGATCTCCAAAAACCCATTTTCACAATGCAGAAAAGTTCCTCAATCTCTTCCTTAGGTCCCGGCGGCCTCGACCTTTCTCAAGCCTTCTTCAAACCAATTCGTGACGCCTCTCCCCCATCCACAGCAAATCGCAACACCAAAATCTCCGTCATCGGCGCCGGAAACGTTGGTATGGCCATCGCTCAAACCATCCTCACTCAAGATCTGGTCGACGAACTCGTCCTCGTCGACGCCAAGCCCGACAAACTCCGTGGCGAAATGCTAGATCTCCAACATGCTGCTGCTTTTCTCCCTCGTACAAAAATTAGCGCCTCCACTGATTACTCCATTACTGCTGGCTCTGATCTGTGTATTGTTACTGCTGGTGCTCGGCAGATCGCCGGTGAATCTAGGTTGAATCTGTTGCAGAGGAATGTTGCTCTGTTTCAGAAGATCGTTCCGCCCTTGGTTCAGTTCTCTCCTGAGACGATTCTTTTGATTGTTTCGAATCCGGTGGATGTTTTGACTTATATTGCTTGGAAACTCTCTGGTTTTCCGTCGAATCGTGTGATTGGATCGGGAACGAATCTGGATTCGTCTAGGTTTCGGTTTCTTATTGCGGATCATCTTGACGTTAACGCTCAGGATGTTCAGGTCAGTTTTGCCATTGATCATTGTTTTTTTTGGTTAATTTGGCGTTGTTTTACTGAAGAAATTTCCCTTTCGTTTGAATTGTTTTTGGTTGATTGGAATCAAATGAGTTGATCATTTTTGGGAAAAAGTAACCAAAATGAACCATAAAATTTCATATTTCTAATTTTGTTATATGAAGTTATTAGGCTCTTTCTAAAGTTCATAAATCAAATTAAAAGCTTTTAAGTGTAAGGAATTATCCATACAAACCAAATTATGTGTAGAGTAATTTATAACTTAACTCAAAAAATTAACTTTCACTTATAAATTTGGACTTATGTGATTTGGAGAAAGTTTGTTACTGTGTTTATAATTAAAACCCTAACAAATATGAGAGCTTTTTGTACTGATAACGGTTTCTTGTGTGGGGTGATTACAATAAGTACTCATTTATAACAACATTTTCAAAATGGTAAATACAACAAGTATGTTGTTAATCTATCAATATTTACAATATAGTAACTCCAACTGTTTTTGTTGTATTTACAATTTTTGAAAATTATTGCTATATAGGTTAATACTTTAAATTTAATTGTTATGTTTGTAATTGTTTGACCCACACCTGCAATAGTGTGAAGTTGGGATAGGGATTTGGCAATGTTAAATGGGAAAAGTGTAAAAAAAGATATCACATCGGGTTATGACATCGGATCAGGGATAAGCCACTATTGGATTGGGAAGTTCATCCCTATCACGATGTCACTTAGAAGGCTAGAAGTGCACTACCATGTAGTTTAGTTACCAAAGTGAAAAATAAATTCAAAGTTCACCCAATTAGAATTCTGACCATCGTTTAGGTTCTTAAAGTATGTATTGATCAAATCATAGATGAATGTCTAGAAATTAAACTAGCATTGATATTGATACTTAGATCATGAAGCTAAAAAACAGTGGATTATATATATATATATCTGTATGTTTTTGAAGGCATACATAGTTGGAGAGCATGGCGACAGCTCGGTGGCGCTATGGTCGAGCATAAGTGTGGGCGGGGTGCCGATCCTAAGCTTTCTAAAGAATCAACAAATCGGCTACGAAAAAGAAACATTAGAGAAAATTCACAAAGAGGTTATAGGTGGGGCTTACGAAGTCATAAACCTTAAGGGCTACACATCATGGGCGATCGGGTACTCCGTTGCGAGTTTAGCTCGGTCGATCCTTCGAGACCAAAGGAGGATCCATCCTGTCTCTGTTCTCGCAAAAGGATTTTACGGTATTGATGGTGGCGACTTGTTCCTTAGCCTGCCTGCACAACTTGGGAGGGGTGGAGTATTGGGGATCACCAATGTGCATCTAACGGCAGAGGAATCGAAACGGTTGAGGGACTCGGCAAACACCATCTTGCAGGTGCAAACCGAGTTGGGGATTTAAACATTTAACTACATTTTCTTCTATCCTATGGATGTTTTTGATGGGCTGTTATGGTGATGTTTGTGTTTGTTATGCGGTTGGTTGAATAGGAAAGAGCTAACTATGAATAGGGGGTGAGATTGATAATGTTTTCTTTTTTTATTACCCCTTAGGATGTTACACTTAATTACATATGATAAATGTATTAACTTTGATAATACAATGAATGATATTATGATCATGAGACGCTACATTGATGAACCAATCTCCCTAGACTCACAAATTTTAATGAAAATATATAATTTGTATGCCCTCCTTATGAAGTCTCATCAATTTTTGTGTGTGATATATATGTTTAGCACATTAACATAAACTCACGTTACACTGTAATTGGAAAACAAATGGTATAAACAAAATTCC

mRNA sequence

GACCCAGCAGAACCAATGAAATGACCCTAAAGAATATTGACCGTTGAAAAATCTATGAAATAGACTTTCTCTTACACTTTCCTCATTCTTTCTATCCAACTTTCTTGAAAACTTTTCTTCTCCTTCTTCTTCATCCTTTCTAACGCAATCCCCATTCAGAATCCGCCAAGTTTCTCTGCAACAAAAATCTTCATCGCCAACCACGATCTCCAAAAACCCATTTTCACAATGCAGAAAAGTTCCTCAATCTCTTCCTTAGGTCCCGGCGGCCTCGACCTTTCTCAAGCCTTCTTCAAACCAATTCGTGACGCCTCTCCCCCATCCACAGCAAATCGCAACACCAAAATCTCCGTCATCGGCGCCGGAAACGTTGGTATGGCCATCGCTCAAACCATCCTCACTCAAGATCTGGTCGACGAACTCGTCCTCGTCGACGCCAAGCCCGACAAACTCCGTGGCGAAATGCTAGATCTCCAACATGCTGCTGCTTTTCTCCCTCGTACAAAAATTAGCGCCTCCACTGATTACTCCATTACTGCTGGCTCTGATCTGTGTATTGTTACTGCTGGTGCTCGGCAGATCGCCGGTGAATCTAGGTTGAATCTGTTGCAGAGGAATGTTGCTCTGTTTCAGAAGATCGTTCCGCCCTTGGTTCAGTTCTCTCCTGAGACGATTCTTTTGATTGTTTCGAATCCGGTGGATGTTTTGACTTATATTGCTTGGAAACTCTCTGGTTTTCCGTCGAATCGTGTGATTGGATCGGGAACGAATCTGGATTCGTCTAGGTTTCGGTTTCTTATTGCGGATCATCTTGACGTTAACGCTCAGGATGTTCAGGCATACATAGTTGGAGAGCATGGCGACAGCTCGGTGGCGCTATGGTCGAGCATAAGTGTGGGCGGGGTGCCGATCCTAAGCTTTCTAAAGAATCAACAAATCGGCTACGAAAAAGAAACATTAGAGAAAATTCACAAAGAGGTTATAGGTGGGGCTTACGAAGTCATAAACCTTAAGGGCTACACATCATGGGCGATCGGGTACTCCGTTGCGAGTTTAGCTCGGTCGATCCTTCGAGACCAAAGGAGGATCCATCCTGTCTCTGTTCTCGCAAAAGGATTTTACGGTATTGATGGTGGCGACTTGTTCCTTAGCCTGCCTGCACAACTTGGGAGGGGTGGAGTATTGGGGATCACCAATGTGCATCTAACGGCAGAGGAATCGAAACGGTTGAGGGACTCGGCAAACACCATCTTGCAGGTGCAAACCGAGTTGGGGATTTAAACATTTAACTACATTTTCTTCTATCCTATGGATGTTTTTGATGGGCTGTTATGGTGATGTTTGTGTTTGTTATGCGGTTGGTTGAATAGGAAAGAGCTAACTATGAATAGGGGGTGAGATTGATAATGTTTTCTTTTTTTATTACCCCTTAGGATGTTACACTTAATTACATATGATAAATGTATTAACTTTGATAATACAATGAATGATATTATGATCATGAGACGCTACATTGATGAACCAATCTCCCTAGACTCACAAATTTTAATGAAAATATATAATTTGTATGCCCTCCTTATGAAGTCTCATCAATTTTTGTGTGTGATATATATGTTTAGCACATTAACATAAACTCACGTTACACTGTAATTGGAAAACAAATGGTATAAACAAAATTCC

Coding sequence (CDS)

ATGCAGAAAAGTTCCTCAATCTCTTCCTTAGGTCCCGGCGGCCTCGACCTTTCTCAAGCCTTCTTCAAACCAATTCGTGACGCCTCTCCCCCATCCACAGCAAATCGCAACACCAAAATCTCCGTCATCGGCGCCGGAAACGTTGGTATGGCCATCGCTCAAACCATCCTCACTCAAGATCTGGTCGACGAACTCGTCCTCGTCGACGCCAAGCCCGACAAACTCCGTGGCGAAATGCTAGATCTCCAACATGCTGCTGCTTTTCTCCCTCGTACAAAAATTAGCGCCTCCACTGATTACTCCATTACTGCTGGCTCTGATCTGTGTATTGTTACTGCTGGTGCTCGGCAGATCGCCGGTGAATCTAGGTTGAATCTGTTGCAGAGGAATGTTGCTCTGTTTCAGAAGATCGTTCCGCCCTTGGTTCAGTTCTCTCCTGAGACGATTCTTTTGATTGTTTCGAATCCGGTGGATGTTTTGACTTATATTGCTTGGAAACTCTCTGGTTTTCCGTCGAATCGTGTGATTGGATCGGGAACGAATCTGGATTCGTCTAGGTTTCGGTTTCTTATTGCGGATCATCTTGACGTTAACGCTCAGGATGTTCAGGCATACATAGTTGGAGAGCATGGCGACAGCTCGGTGGCGCTATGGTCGAGCATAAGTGTGGGCGGGGTGCCGATCCTAAGCTTTCTAAAGAATCAACAAATCGGCTACGAAAAAGAAACATTAGAGAAAATTCACAAAGAGGTTATAGGTGGGGCTTACGAAGTCATAAACCTTAAGGGCTACACATCATGGGCGATCGGGTACTCCGTTGCGAGTTTAGCTCGGTCGATCCTTCGAGACCAAAGGAGGATCCATCCTGTCTCTGTTCTCGCAAAAGGATTTTACGGTATTGATGGTGGCGACTTGTTCCTTAGCCTGCCTGCACAACTTGGGAGGGGTGGAGTATTGGGGATCACCAATGTGCATCTAACGGCAGAGGAATCGAAACGGTTGAGGGACTCGGCAAACACCATCTTGCAGGTGCAAACCGAGTTGGGGATTTAA

Protein sequence

MQKSSSISSLGPGGLDLSQAFFKPIRDASPPSTANRNTKISVIGAGNVGMAIAQTILTQDLVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSDLCIVTAGARQIAGESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYIAWKLSGFPSNRVIGSGTNLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQIGYEKETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVLAKGFYGIDGGDLFLSLPAQLGRGGVLGITNVHLTAEESKRLRDSANTILQVQTELGI

Homology

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BLAST of CsGy5G004100 vs. NCBI nr
Match: XP_004151663.2 (PREDICTED: LOW QUALITY PROTEIN: L-lactate dehydrogenase A-like [Cucumis sativus])

HSP 1 Score: 669.5 bits (1726), Expect = 6.3e-189
Identity = 347/350 (99.14%), Postives = 348/350 (99.43%), Query Frame = 0


Query: 1   MQKSSSISSLGPGGLDLSQAFFKPIRDASPPSTANRNTKISVIGAGNVGMAIAQTILTQD 60
           MQKSSSISSLGPGGLDLSQAFFKPIRDASPPSTANRNTKISVIGAGNVGMAIAQTILTQD
Sbjct: 1   MQKSSSISSLGPGGLDLSQAFFKPIRDASPPSTANRNTKISVIGAGNVGMAIAQTILTQD 60

Query: 61  LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSDLCIVTAGARQIAG 120
           LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSDLCIVT GARQIAG
Sbjct: 61  LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSDLCIVTGGARQIAG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYIAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYIAWKLSGFPSNRVI SGT
Sbjct: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYIAWKLSGFPSNRVIXSGT 180

Query: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQIGYE 240
           NL+SSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQIGYE
Sbjct: 181 NLNSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQIGYE 240

Query: 241 KETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVLAKGFYGI 300
           KETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVLAKGFYGI
Sbjct: 241 KETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVLAKGFYGI 300

Query: 301 DGGDLFLSLPAQLGRGGVLGITNVHLTAEESKRLRDSANTILQVQTELGI 351
           DGGDLFLSLPAQLGRGGVLGITNVHLTAEESKRLRDSANTILQVQTELGI
Sbjct: 301 DGGDLFLSLPAQLGRGGVLGITNVHLTAEESKRLRDSANTILQVQTELGI 350

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BLAST of CsGy5G004100 vs. NCBI nr
Match: XP_008437100.2 (PREDICTED: L-lactate dehydrogenase A [Cucumis melo])

HSP 1 Score: 664.1 bits (1712), Expect = 2.7e-187
Identity = 343/350 (98.00%), Postives = 346/350 (98.86%), Query Frame = 0


Query: 1   MQKSSSISSLGPGGLDLSQAFFKPIRDASPPSTANRNTKISVIGAGNVGMAIAQTILTQD 60
           MQKS S SSLGPGGLDLSQAFFKPIRDASPPST+NRNTKISVIGAGNVGMAIAQTILTQD
Sbjct: 1   MQKSPSTSSLGPGGLDLSQAFFKPIRDASPPSTSNRNTKISVIGAGNVGMAIAQTILTQD 60

Query: 61  LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSDLCIVTAGARQIAG 120
           LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYS TAGS+LCIVTAGARQIAG
Sbjct: 61  LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSTTAGSNLCIVTAGARQIAG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYIAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTY+AWKLSGFPSNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180

Query: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQIGYE 240
           NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQI YE
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQIAYE 240

Query: 241 KETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVLAKGFYGI 300
           KETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVLAKGFYGI
Sbjct: 241 KETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVLAKGFYGI 300

Query: 301 DGGDLFLSLPAQLGRGGVLGITNVHLTAEESKRLRDSANTILQVQTELGI 351
           DGGDLFLSLPAQLGRGGVLGITNVHLTAEESKRLRDSANTILQVQTELGI
Sbjct: 301 DGGDLFLSLPAQLGRGGVLGITNVHLTAEESKRLRDSANTILQVQTELGI 350

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BLAST of CsGy5G004100 vs. NCBI nr
Match: XP_022922404.1 (L-lactate dehydrogenase A-like isoform X1 [Cucurbita moschata] >XP_022922405.1 L-lactate dehydrogenase A-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 642.1 bits (1655), Expect = 1.1e-180
Identity = 329/350 (94.00%), Postives = 341/350 (97.43%), Query Frame = 0


Query: 1   MQKSSSISSLGPGGLDLSQAFFKPIRDASPPSTANRNTKISVIGAGNVGMAIAQTILTQD 60
           M+KSSS SSLGPGGLD+SQAFFKP+ DASPPST+ RNTKISVIGAGNVGMAIAQTILTQD
Sbjct: 1   MEKSSSASSLGPGGLDISQAFFKPVSDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQD 60

Query: 61  LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSDLCIVTAGARQIAG 120
           L DELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYS+TA SDLCIVTAGARQIAG
Sbjct: 61  LADELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAESDLCIVTAGARQIAG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYIAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALFQKIVPPLVQ+SPETILLIVSNPVDVLTY+AWKLSGFPSNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFQKIVPPLVQYSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180

Query: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQIGYE 240
           NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFL+NQQI YE
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLQNQQITYE 240

Query: 241 KETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVLAKGFYGI 300
           KETLE IHKEVIGGAYEVINLKGYTSWAIGYSVASLARS+LRDQRRIHPVSVLAKGFYGI
Sbjct: 241 KETLESIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSLLRDQRRIHPVSVLAKGFYGI 300

Query: 301 DGGDLFLSLPAQLGRGGVLGITNVHLTAEESKRLRDSANTILQVQTELGI 351
           +GG+LFLSLPAQLGRGGVLGITNVHLT EES RLRDSANTILQVQT+LGI
Sbjct: 301 NGGELFLSLPAQLGRGGVLGITNVHLTDEESGRLRDSANTILQVQTQLGI 350

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BLAST of CsGy5G004100 vs. NCBI nr
Match: XP_011654796.1 (PREDICTED: L-lactate dehydrogenase B-like [Cucumis sativus] >KGN50243.1 hypothetical protein Csa_5G161920 [Cucumis sativus])

HSP 1 Score: 641.0 bits (1652), Expect = 2.4e-180
Identity = 333/350 (95.14%), Postives = 338/350 (96.57%), Query Frame = 0


Query: 1   MQKSSSISSLGPGGLDLSQAFFKPIRDASPPSTANRNTKISVIGAGNVGMAIAQTILTQD 60
           MQKS S SSLGPGGLDLSQAFFKPIRDASP ST+N NTKISVIG GNVGMAIAQTILTQD
Sbjct: 63  MQKSPSTSSLGPGGLDLSQAFFKPIRDASPLSTSNCNTKISVIGTGNVGMAIAQTILTQD 122

Query: 61  LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSDLCIVTAGARQIAG 120
           LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITA SDLCIVTAGARQIAG
Sbjct: 123 LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITARSDLCIVTAGARQIAG 182

Query: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYIAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNV LFQKIVP LVQFSPETILLIVSNPVDVLTY+AWKLSGF SNRVIGSGT
Sbjct: 183 ESRLNLLQRNVTLFQKIVPLLVQFSPETILLIVSNPVDVLTYVAWKLSGFSSNRVIGSGT 242

Query: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQIGYE 240
           NLDSSRFRFLIADHLDVNAQDVQA+IVGEHGDSSVALWSSISVGGVPILSFLKNQQIGYE
Sbjct: 243 NLDSSRFRFLIADHLDVNAQDVQAFIVGEHGDSSVALWSSISVGGVPILSFLKNQQIGYE 302

Query: 241 KETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVLAKGFYGI 300
           KETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSV+AKGFYGI
Sbjct: 303 KETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVIAKGFYGI 362

Query: 301 DGGDLFLSLPAQLGRGGVLGITNVHLTAEESKRLRDSANTILQVQTELGI 351
           +GGDLFLSLPAQLGRGGVLGITNVHLT EESKRLRDSANTIL VQ ELGI
Sbjct: 363 EGGDLFLSLPAQLGRGGVLGITNVHLTTEESKRLRDSANTILHVQAELGI 412

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BLAST of CsGy5G004100 vs. NCBI nr
Match: XP_022969721.1 (L-lactate dehydrogenase A-like [Cucurbita maxima])

HSP 1 Score: 639.4 bits (1648), Expect = 7.0e-180
Identity = 327/350 (93.43%), Postives = 341/350 (97.43%), Query Frame = 0


Query: 1   MQKSSSISSLGPGGLDLSQAFFKPIRDASPPSTANRNTKISVIGAGNVGMAIAQTILTQD 60
           M+KSSS SSLGPGGL++SQAFFKP+ DASPPST+ RNTKISVIGAGNVGMAIAQTILTQD
Sbjct: 1   MEKSSSASSLGPGGLNISQAFFKPVSDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQD 60

Query: 61  LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSDLCIVTAGARQIAG 120
           L DELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYS+TA SDLCIVTAGARQIAG
Sbjct: 61  LADELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAESDLCIVTAGARQIAG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYIAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALFQKIVPPLVQ+SPETILLIVSNPVDVLTY+AWKLSGFPSNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFQKIVPPLVQYSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180

Query: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQIGYE 240
           NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFL+NQQI YE
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLQNQQITYE 240

Query: 241 KETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVLAKGFYGI 300
           KETLE IHKEVIGGAYEVINLKGYTSWAIGYSVASLARS+LRDQRRIHPVSVLAKGFYGI
Sbjct: 241 KETLESIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSLLRDQRRIHPVSVLAKGFYGI 300

Query: 301 DGGDLFLSLPAQLGRGGVLGITNVHLTAEESKRLRDSANTILQVQTELGI 351
           +GG++FLSLPAQLGRGGVLGITNVHLT EES RLRDSANTILQVQT+LGI
Sbjct: 301 NGGEMFLSLPAQLGRGGVLGITNVHLTDEESGRLRDSANTILQVQTQLGI 350

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BLAST of CsGy5G004100 vs. TAIR10
Match: AT4G17260.1 (Lactate/malate dehydrogenase family protein)

HSP 1 Score: 550.4 bits (1417), Expect = 7.8e-157
Identity = 268/347 (77.23%), Postives = 313/347 (90.20%), Query Frame = 0


Query: 4   SSSISSLGPGGLDLSQAFFKPIRDASPPSTANRNTKISVIGAGNVGMAIAQTILTQDLVD 63
           +SS+  LGP GLDL+ AFFKPI ++ P   +NR TK+SV+G GNVGMAIAQTILTQDL D
Sbjct: 7   TSSLKDLGPSGLDLTSAFFKPIHNSDPSLPSNRRTKVSVVGVGNVGMAIAQTILTQDLAD 66

Query: 64  ELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSDLCIVTAGARQIAGESR 123
           E+ LVDAKPDKLRGEMLDLQHAAAFLPRTKI+AS DY +TAGSDLCIVTAGARQ  GESR
Sbjct: 67  EIALVDAKPDKLRGEMLDLQHAAAFLPRTKITASVDYEVTAGSDLCIVTAGARQNPGESR 126

Query: 124 LNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYIAWKLSGFPSNRVIGSGTNLD 183
           LNLLQRNVALF+ I+PPL + SP++IL+IVSNPVDVLTY+AWKLSGFP NRV+GSGTNLD
Sbjct: 127 LNLLQRNVALFRHIIPPLAKASPDSILIIVSNPVDVLTYVAWKLSGFPVNRVLGSGTNLD 186

Query: 184 SSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQIGYEKET 243
           SSRFRFLIADHLDVNAQDVQA+IVGEHGDSSVALWSSISVGG+P+LSFL+  QI YEK+T
Sbjct: 187 SSRFRFLIADHLDVNAQDVQAFIVGEHGDSSVALWSSISVGGIPVLSFLEKNQIAYEKQT 246

Query: 244 LEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVLAKGFYGIDGG 303
           LE IH+ V+G AYEVI LKGYTSWAIGYSVA+LAR+ILRDQR+IHPV+VLA+GFYG+DGG
Sbjct: 247 LEDIHQAVVGSAYEVIGLKGYTSWAIGYSVANLARTILRDQRKIHPVTVLARGFYGVDGG 306

Query: 304 DLFLSLPAQLGRGGVLGITNVHLTAEESKRLRDSANTILQVQTELGI 351
           D+FLSLPA LGR GV+ +TNVH+T EE+++L+ SA TIL++Q++LG+
Sbjct: 307 DVFLSLPALLGRNGVVAVTNVHMTDEEAEKLQKSAKTILEMQSQLGL 353

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BLAST of CsGy5G004100 vs. Swiss-Prot
Match: sp|P22988|LDHA_HORVU (L-lactate dehydrogenase A OS=Hordeum vulgare OX=4513 PE=1 SV=1)

HSP 1 Score: 463.8 bits (1192), Expect = 1.7e-129
Identity = 242/348 (69.54%), Postives = 287/348 (82.47%), Query Frame = 0


Query: 1   MQKSSSISSLGPGGLDLSQAFFKPIRD---ASPPSTA---NRNTKISVIGAGNVGMAIAQ 60
           M K+SS+S LG      S  FF+P+ D   A+P S+A    R TKISVIGAGNVGMAIAQ
Sbjct: 1   MHKASSLSELGFDAGGASSGFFRPVADGCPATPTSSAVPHRRLTKISVIGAGNVGMAIAQ 60

Query: 61  TILTQDLVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSDLCIVTAG 120
           TILTQ+L DE+ LVDA PDKLRGE LDLQHAAAFLPR +IS  TD ++T  SDL IVTAG
Sbjct: 61  TILTQNLADEIALVDALPDKLRGEALDLQHAAAFLPRVRIS-GTDAAVTKNSDLVIVTAG 120

Query: 121 ARQIAGESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYIAWKLSGFPSNR 180
           ARQI GE+RLNLLQRNVAL++KIVPP+ + SP+ +LL+VSNPVDVLTY+AWKLSGFP++R
Sbjct: 121 ARQIPGETRLNLLQRNVALYRKIVPPVAEHSPDALLLVVSNPVDVLTYVAWKLSGFPASR 180

Query: 181 VIGSGTNLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKN 240
           VIGSGTNLDSSRFRFLIA+HLDVNAQDVQAY+VGEHGDSSVA+WSSISVGG+P    L++
Sbjct: 181 VIGSGTNLDSSRFRFLIAEHLDVNAQDVQAYMVGEHGDSSVAIWSSISVGGMPAFKSLRD 240

Query: 241 QQIGYEKETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVLA 300
               +++  LE I + V+GGAYEVI LKGYTSWAIGYSVASLA S+LRDQRR+HPVSVLA
Sbjct: 241 SHRSFDEAALEGIRRAVVGGAYEVIGLKGYTSWAIGYSVASLAASLLRDQRRVHPVSVLA 300

Query: 301 KGFYGI-DGGDLFLSLPAQLGRGGVLGITNVHLTAEESKRLRDSANTI 342
            GF+GI DG ++FLSLPA+LGRGG+LG+  + LT  E+ +LR SA T+
Sbjct: 301 SGFHGISDGHEVFLSLPARLGRGGILGVAEMDLTEAEAAQLRRSAKTL 347

[Close]

BLAST of CsGy5G004100 vs. Swiss-Prot
Match: sp|P22989|LDHB_HORVU (L-lactate dehydrogenase B (Fragment) OS=Hordeum vulgare OX=4513 PE=1 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 8.9e-126
Identity = 230/342 (67.25%), Postives = 278/342 (81.29%), Query Frame = 0


Query: 16  DLSQAFFKPIRDASP------PSTANRNTKISVIGAGNVGMAIAQTILTQDLVDELVLVD 75
           D S  FF+ + D  P       +   R TK+SVIGAGNVGMAIAQTILTQ+L DE+ LVD
Sbjct: 3   DASSGFFRAVADGCPITHTSCSAPHRRLTKVSVIGAGNVGMAIAQTILTQNLADEIALVD 62

Query: 76  AKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSDLCIVTAGARQIAGESRLNLLQR 135
           A PDKLRGE LDLQHAAAFLPR +I + TD ++T  SDL +VTAGARQI GE+RLNLLQR
Sbjct: 63  ALPDKLRGEALDLQHAAAFLPRVRIVSGTDAAVTKNSDLIVVTAGARQIPGETRLNLLQR 122

Query: 136 NVALFQKIVPPLVQFSPETILLIVSNPVDVLTYIAWKLSGFPSNRVIGSGTNLDSSRFRF 195
           NVAL++KIVPP+ + SP+ +LL+VSNPVDVLTY+AWKLSGFP++RVIGSGTNLDSSRFRF
Sbjct: 123 NVALYRKIVPPVAEHSPDALLLVVSNPVDVLTYVAWKLSGFPASRVIGSGTNLDSSRFRF 182

Query: 196 LIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQIGYEKETLEKIHK 255
           L+A+HLDV+AQDVQAY+VGEHGDSSVA+WSSISVGG+P L  L++    +++  LE I +
Sbjct: 183 LVAEHLDVSAQDVQAYMVGEHGDSSVAIWSSISVGGMPALKSLRDSHRSFDEAALEGIRR 242

Query: 256 EVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVLAKGFYGI-DGGDLFLS 315
            V+GGAYEVI LKGYTSWAIGYSVASLA S+LRDQRR+HPVSVLA GF+GI DG ++FLS
Sbjct: 243 AVVGGAYEVIGLKGYTSWAIGYSVASLATSLLRDQRRVHPVSVLAAGFHGISDGHEVFLS 302

Query: 316 LPAQLGRGGVLGITNVHLTAEESKRLRDSANTILQVQTELGI 351
           LPA+LGR GVLG+  + LT  E+ +LR SA T+ +    LG+
Sbjct: 303 LPARLGRAGVLGVAEMDLTEAEAAQLRRSAKTLWENCQLLGL 344

[Close]

BLAST of CsGy5G004100 vs. Swiss-Prot
Match: sp|P29038|LDH_MAIZE (L-lactate dehydrogenase OS=Zea mays OX=4577 PE=2 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 7.8e-122
Identity = 232/354 (65.54%), Postives = 280/354 (79.10%), Query Frame = 0


Query: 1   MQKSSSISSLGPGGLDLSQAFFKPIR-DASPPSTAN---RNTKISVIGAGNVGMAIAQTI 60
           M+K++S+S LG    D S  FF+P+  D+S P++ +   R TK+SVIGAGNVGMAIAQTI
Sbjct: 1   MKKATSLSELGFDAGDASSGFFRPVSGDSSTPTSQHHRRRLTKVSVIGAGNVGMAIAQTI 60

Query: 61  LTQDLVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSDLCIVTAGAR 120
           LT+DL DE+ LVDA PDKLRGEMLDLQHAAAFLPRT++ + TD S+T GSDL IVTAGAR
Sbjct: 61  LTRDLADEIALVDAVPDKLRGEMLDLQHAAAFLPRTRLVSGTDMSVTRGSDLVIVTAGAR 120

Query: 121 QIAGESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYIAWKLSGFPSNRVI 180
           QI GE+RL+LLQRNVALF+KIVPPL + S + +LL+VSNPVDVLTY+AWKLSGFP++RVI
Sbjct: 121 QIQGETRLDLLQRNVALFRKIVPPLAEQSHDALLLVVSNPVDVLTYVAWKLSGFPASRVI 180

Query: 181 GSGTNLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQ 240
           GSGTNLDSSRFRFL+A+HLDVNAQDVQAY+VGEHGDSSVA+WSS+SV G+P+L  L+   
Sbjct: 181 GSGTNLDSSRFRFLLAEHLDVNAQDVQAYMVGEHGDSSVAVWSSVSVAGMPVLKSLQESH 240

Query: 241 IGYEKETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVLAKG 300
             +++E LE I + V+  AYEVI+LKGYTSWAIGYSVASLA S+LRDQRRIHPVSVLA+G
Sbjct: 241 RCFDEEALEGIRRAVVDSAYEVISLKGYTSWAIGYSVASLAASLLRDQRRIHPVSVLARG 300

Query: 301 FYGIDGGDLFLSLPAQLGRGGVLGITNVHLTAEESKRLRDSANTILQVQTELGI 351
           F+GI  G    S               + LT EE+KRLR SA TI +    LG+
Sbjct: 301 FHGIPDGTTSSSACPPRRXXXXXXRREMELTEEEAKRLRRSAKTIWENCQLLGL 354

[Close]

BLAST of CsGy5G004100 vs. Swiss-Prot
Match: sp|P06151|LDHA_MOUSE (L-lactate dehydrogenase A chain OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=3)

HSP 1 Score: 347.1 bits (889), Expect = 2.4e-94
Identity = 174/310 (56.13%), Postives = 228/310 (73.55%), Query Frame = 0


Query: 39  KISVIGAGNVGMAIAQTILTQDLVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISAST 98
           KI+V+G G VGMA A +IL +DL DEL LVD   DKL+GEM+DLQH + FL   KI +S 
Sbjct: 22  KITVVGVGAVGMACAISILMKDLADELALVDVMEDKLKGEMMDLQHGSLFLKTPKIVSSK 81

Query: 99  DYSITAGSDLCIVTAGARQIAGESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVD 158
           DY +TA S L I+TAGARQ  GESRLNL+QRNV +F+ I+P +V++SP   LLIVSNPVD
Sbjct: 82  DYCVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKYSPHCKLLIVSNPVD 141

Query: 159 VLTYIAWKLSGFPSNRVIGSGTNLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALW 218
           +LTY+AWK+SGFP NRVIGSG NLDS+RFR+L+ + L V+A     +++GEHGDSSV +W
Sbjct: 142 ILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHALSCHGWVLGEHGDSSVPVW 201

Query: 219 SSISVGGVPILSFLKNQQIGYEKETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLAR 278
           S ++V GV + S         +KE  +++HK+V+  AYEVI LKGYTSWAIG SVA LA 
Sbjct: 202 SGVNVAGVSLKSLNPELGTDADKEQWKEVHKQVVDSAYEVIKLKGYTSWAIGLSVADLAE 261

Query: 279 SILRDQRRIHPVSVLAKGFYGIDGGDLFLSLPAQLGRGGVLGITNVHLTAEESKRLRDSA 338
           SI+++ RR+HP+S + KG YGI+  D+FLS+P  LG+ G+  +  V LT EE  RL+ SA
Sbjct: 262 SIMKNLRRVHPISTMIKGLYGIN-EDVFLSVPCILGQNGISDVVKVTLTPEEEARLKKSA 321

Query: 339 NTILQVQTEL 349
           +T+  +Q EL
Sbjct: 322 DTLWGIQKEL 330

[Close]

BLAST of CsGy5G004100 vs. Swiss-Prot
Match: sp|P04642|LDHA_RAT (L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 1.2e-93
Identity = 176/312 (56.41%), Postives = 231/312 (74.04%), Query Frame = 0


Query: 39  KISVIGAGNVGMAIAQTILTQDLVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISAST 98
           KI+V+G G VGMA A +IL +DL DEL LVD   DKL+GEM+DLQH + FL   KI +S 
Sbjct: 22  KITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSK 81

Query: 99  DYSITAGSDLCIVTAGARQIAGESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVD 158
           DYS+TA S L I+TAGARQ  GESRLNL+QRNV +F+ I+P +V++SP+  LLIVSNPVD
Sbjct: 82  DYSVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNPVD 141

Query: 159 VLTYIAWKLSGFPSNRVIGSGTNLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALW 218
           +LTY+AWK+SGFP NRVIGSG NLDS+RFR+L+ + L V+      +++GEHGDSSV +W
Sbjct: 142 ILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVW 201

Query: 219 SSISVGGVPILSFLKNQQIG--YEKETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASL 278
           S ++V GV + S   N Q+G   +KE  + +HK+V+  AYEVI LKGYTSWAIG SVA L
Sbjct: 202 SGVNVAGVSLKSL--NPQLGTDADKEQWKDVHKQVVDSAYEVIKLKGYTSWAIGLSVADL 261

Query: 279 ARSILRDQRRIHPVSVLAKGFYGIDGGDLFLSLPAQLGRGGVLGITNVHLTAEESKRLRD 338
           A SI+++ RR+HP+S + KG YGI   D+FLS+P  LG+ G+  +  V LT +E  RL+ 
Sbjct: 262 AESIMKNLRRVHPISTMIKGLYGIK-EDVFLSVPCILGQNGISDVVKVTLTPDEEARLKK 321

Query: 339 SANTILQVQTEL 349
           SA+T+  +Q EL
Sbjct: 322 SADTLWGIQKEL 330

[Close]

BLAST of CsGy5G004100 vs. TrEMBL
Match: tr|A0A1S3ATB9|A0A1S3ATB9_CUCME (L-lactate dehydrogenase OS=Cucumis melo OX=3656 GN=LOC103482619 PE=3 SV=1)

HSP 1 Score: 664.1 bits (1712), Expect = 1.8e-187
Identity = 343/350 (98.00%), Postives = 346/350 (98.86%), Query Frame = 0


Query: 1   MQKSSSISSLGPGGLDLSQAFFKPIRDASPPSTANRNTKISVIGAGNVGMAIAQTILTQD 60
           MQKS S SSLGPGGLDLSQAFFKPIRDASPPST+NRNTKISVIGAGNVGMAIAQTILTQD
Sbjct: 1   MQKSPSTSSLGPGGLDLSQAFFKPIRDASPPSTSNRNTKISVIGAGNVGMAIAQTILTQD 60

Query: 61  LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSDLCIVTAGARQIAG 120
           LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYS TAGS+LCIVTAGARQIAG
Sbjct: 61  LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSTTAGSNLCIVTAGARQIAG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYIAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTY+AWKLSGFPSNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180

Query: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQIGYE 240
           NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQI YE
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQIAYE 240

Query: 241 KETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVLAKGFYGI 300
           KETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVLAKGFYGI
Sbjct: 241 KETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVLAKGFYGI 300

Query: 301 DGGDLFLSLPAQLGRGGVLGITNVHLTAEESKRLRDSANTILQVQTELGI 351
           DGGDLFLSLPAQLGRGGVLGITNVHLTAEESKRLRDSANTILQVQTELGI
Sbjct: 301 DGGDLFLSLPAQLGRGGVLGITNVHLTAEESKRLRDSANTILQVQTELGI 350

[Close]

BLAST of CsGy5G004100 vs. TrEMBL
Match: tr|A0A0A0KKU9|A0A0A0KKU9_CUCSA (L-lactate dehydrogenase OS=Cucumis sativus OX=3659 GN=Csa_5G161920 PE=3 SV=1)

HSP 1 Score: 641.0 bits (1652), Expect = 1.6e-180
Identity = 333/350 (95.14%), Postives = 338/350 (96.57%), Query Frame = 0


Query: 1   MQKSSSISSLGPGGLDLSQAFFKPIRDASPPSTANRNTKISVIGAGNVGMAIAQTILTQD 60
           MQKS S SSLGPGGLDLSQAFFKPIRDASP ST+N NTKISVIG GNVGMAIAQTILTQD
Sbjct: 63  MQKSPSTSSLGPGGLDLSQAFFKPIRDASPLSTSNCNTKISVIGTGNVGMAIAQTILTQD 122

Query: 61  LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSDLCIVTAGARQIAG 120
           LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITA SDLCIVTAGARQIAG
Sbjct: 123 LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITARSDLCIVTAGARQIAG 182

Query: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYIAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNV LFQKIVP LVQFSPETILLIVSNPVDVLTY+AWKLSGF SNRVIGSGT
Sbjct: 183 ESRLNLLQRNVTLFQKIVPLLVQFSPETILLIVSNPVDVLTYVAWKLSGFSSNRVIGSGT 242

Query: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQIGYE 240
           NLDSSRFRFLIADHLDVNAQDVQA+IVGEHGDSSVALWSSISVGGVPILSFLKNQQIGYE
Sbjct: 243 NLDSSRFRFLIADHLDVNAQDVQAFIVGEHGDSSVALWSSISVGGVPILSFLKNQQIGYE 302

Query: 241 KETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVLAKGFYGI 300
           KETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSV+AKGFYGI
Sbjct: 303 KETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVIAKGFYGI 362

Query: 301 DGGDLFLSLPAQLGRGGVLGITNVHLTAEESKRLRDSANTILQVQTELGI 351
           +GGDLFLSLPAQLGRGGVLGITNVHLT EESKRLRDSANTIL VQ ELGI
Sbjct: 363 EGGDLFLSLPAQLGRGGVLGITNVHLTTEESKRLRDSANTILHVQAELGI 412

[Close]

BLAST of CsGy5G004100 vs. TrEMBL
Match: tr|A0A067KUG8|A0A067KUG8_JATCU (L-lactate dehydrogenase OS=Jatropha curcas OX=180498 GN=JCGZ_03382 PE=3 SV=1)

HSP 1 Score: 600.1 bits (1546), Expect = 3.1e-168
Identity = 301/350 (86.00%), Postives = 328/350 (93.71%), Query Frame = 0


Query: 1   MQKSSSISSLGPGGLDLSQAFFKPIRDASPPSTANRNTKISVIGAGNVGMAIAQTILTQD 60
           MQKS S S+LGPGGLDL+QAFFKPI++ +PPS   R+TKISVIG GNVGMAIAQTILTQD
Sbjct: 1   MQKSPSASTLGPGGLDLTQAFFKPIQNTAPPSPTKRHTKISVIGTGNVGMAIAQTILTQD 60

Query: 61  LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSDLCIVTAGARQIAG 120
           L DEL LVDAKPDKLRGEMLDLQHAAAFLPRTKI ASTDYS+T GSDLCIVTAGARQI G
Sbjct: 61  LADELALVDAKPDKLRGEMLDLQHAAAFLPRTKIIASTDYSVTVGSDLCIVTAGARQIPG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYIAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALF+KI+PPLV +SPE+IL+IVSNPVDVLTYIAWKLSGFPSNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFEKIIPPLVNYSPESILMIVSNPVDVLTYIAWKLSGFPSNRVIGSGT 180

Query: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQIGYE 240
           NLDSSRFRFLIADHLDVNAQDVQA+IVGEHGDSSVALWSSISVGGVPILSFL+ QQI YE
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQAFIVGEHGDSSVALWSSISVGGVPILSFLEKQQIAYE 240

Query: 241 KETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVLAKGFYGI 300
           KETLE IHK VI  AYEVINLKGYTSWAIGYS A+LARS+LRDQR+IHPVSVLAKGFYGI
Sbjct: 241 KETLENIHKAVIDSAYEVINLKGYTSWAIGYSAANLARSLLRDQRKIHPVSVLAKGFYGI 300

Query: 301 DGGDLFLSLPAQLGRGGVLGITNVHLTAEESKRLRDSANTILQVQTELGI 351
           DGG++FLSLPAQLGRGGVLG+TNVHLT EE++RLR+SA T+L+VQ++LGI
Sbjct: 301 DGGEVFLSLPAQLGRGGVLGVTNVHLTEEEARRLRESAKTLLEVQSQLGI 350

[Close]

BLAST of CsGy5G004100 vs. TrEMBL
Match: tr|A0A2P5F5D0|A0A2P5F5D0_9ROSA (L-lactate dehydrogenase OS=Trema orientalis OX=63057 GN=TorRG33x02_112750 PE=3 SV=1)

HSP 1 Score: 597.4 bits (1539), Expect = 2.0e-167
Identity = 299/350 (85.43%), Postives = 328/350 (93.71%), Query Frame = 0


Query: 1   MQKSSSISSLGPGGLDLSQAFFKPIRDASPPSTANRNTKISVIGAGNVGMAIAQTILTQD 60
           MQKS S SSLGPGGLDLS+AFFKPI  A+PPS   R+TKISVIGAGNVGMAIAQTILTQD
Sbjct: 1   MQKSESTSSLGPGGLDLSEAFFKPIHRAAPPSPTKRHTKISVIGAGNVGMAIAQTILTQD 60

Query: 61  LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSDLCIVTAGARQIAG 120
           L DELVLVDAKPDKLRGEMLDLQHAAAFLPRTKI AS DY++TAGSDLCIVTAGARQI G
Sbjct: 61  LADELVLVDAKPDKLRGEMLDLQHAAAFLPRTKIHASVDYAVTAGSDLCIVTAGARQIPG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYIAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALF+ I+PPL ++SP+TILLIVSNPVDVLTY++WKLSGFPSNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFRNIIPPLARYSPDTILLIVSNPVDVLTYVSWKLSGFPSNRVIGSGT 180

Query: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQIGYE 240
           NLDSSRFRFLIADHLDVNAQDVQAYI+GEHGDSSVALWSSISVGGVP+LSFL+ QQI YE
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQAYIIGEHGDSSVALWSSISVGGVPVLSFLERQQIPYE 240

Query: 241 KETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVLAKGFYGI 300
           K+TLE IHK+VIG AYEVI+LKGYTSWAIGYS A+LARSILRDQR+IHPV+VLA G YGI
Sbjct: 241 KQTLENIHKQVIGSAYEVISLKGYTSWAIGYSAANLARSILRDQRKIHPVTVLATGLYGI 300

Query: 301 DGGDLFLSLPAQLGRGGVLGITNVHLTAEESKRLRDSANTILQVQTELGI 351
           DGG++FLSLPAQLGRGGVLG+TNVHL+ EE +RLRDSANTIL+VQ++LGI
Sbjct: 301 DGGEVFLSLPAQLGRGGVLGVTNVHLSDEEGQRLRDSANTILEVQSQLGI 350

[Close]

BLAST of CsGy5G004100 vs. TrEMBL
Match: tr|A0A2P5AVQ4|A0A2P5AVQ4_PARAD (L-lactate dehydrogenase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_295320 PE=3 SV=1)

HSP 1 Score: 596.7 bits (1537), Expect = 3.5e-167
Identity = 300/350 (85.71%), Postives = 328/350 (93.71%), Query Frame = 0


Query: 1   MQKSSSISSLGPGGLDLSQAFFKPIRDASPPSTANRNTKISVIGAGNVGMAIAQTILTQD 60
           MQKS S SSLGPGGLDLS+AFFKPI  A+PPS   R+TKISVIGAGNVGMAIAQTILTQD
Sbjct: 1   MQKSESTSSLGPGGLDLSEAFFKPIHRAAPPSPTKRHTKISVIGAGNVGMAIAQTILTQD 60

Query: 61  LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSDLCIVTAGARQIAG 120
           L DELVLVDAKPDKLRGEMLDLQHAAAFLPRTKI AS +Y+ITAGSDLCIVTAGARQI G
Sbjct: 61  LADELVLVDAKPDKLRGEMLDLQHAAAFLPRTKIHASVEYAITAGSDLCIVTAGARQIPG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYIAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALF+ I+PPL +FSP+TILLIVSNPVDVLTY++WKLSGFPSNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFRNIIPPLARFSPDTILLIVSNPVDVLTYVSWKLSGFPSNRVIGSGT 180

Query: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQIGYE 240
           NLDSSRFRFLIADHLDVNAQDVQAYI+GEHGDSSVALWSSISVGGVP+LSFL+ QQI YE
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQAYIIGEHGDSSVALWSSISVGGVPVLSFLERQQIPYE 240

Query: 241 KETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVLAKGFYGI 300
           K+TLE IHK+VIG AYEVI+LKGYTSWAIGYS A+LARSILR+QR+IHPVSVLA G YGI
Sbjct: 241 KQTLENIHKQVIGSAYEVISLKGYTSWAIGYSAANLARSILRNQRKIHPVSVLATGLYGI 300

Query: 301 DGGDLFLSLPAQLGRGGVLGITNVHLTAEESKRLRDSANTILQVQTELGI 351
           DGG++FLSLPAQLGRGGVLG+TNVHL+ EE +RLRDSANTIL+VQ++LGI
Sbjct: 301 DGGEVFLSLPAQLGRGGVLGVTNVHLSDEEGQRLRDSANTILEVQSQLGI 350

The following BLAST results are available for this feature:

BLAST of CsGy5G004100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004151663.2	6.3e-189	99.14	PREDICTED: LOW QUALITY PROTEIN: L-lactate dehydrogenase A-like [Cucumis sativus]	[more]
XP_008437100.2	2.7e-187	98.00	PREDICTED: L-lactate dehydrogenase A [Cucumis melo]	[more]
XP_022922404.1	1.1e-180	94.00	L-lactate dehydrogenase A-like isoform X1 [Cucurbita moschata] >XP_022922405.1 L...	[more]
XP_011654796.1	2.4e-180	95.14	PREDICTED: L-lactate dehydrogenase B-like [Cucumis sativus] >KGN50243.1 hypothet...	[more]
XP_022969721.1	7.0e-180	93.43	L-lactate dehydrogenase A-like [Cucurbita maxima]	[more]

BLAST of CsGy5G004100 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G17260.1	7.8e-157	77.23	Lactate/malate dehydrogenase family protein	[more]

BLAST of CsGy5G004100 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P22988\|LDHA_HORVU	1.7e-129	69.54	L-lactate dehydrogenase A OS=Hordeum vulgare OX=4513 PE=1 SV=1	[more]
sp\|P22989\|LDHB_HORVU	8.9e-126	67.25	L-lactate dehydrogenase B (Fragment) OS=Hordeum vulgare OX=4513 PE=1 SV=1	[more]
sp\|P29038\|LDH_MAIZE	7.8e-122	65.54	L-lactate dehydrogenase OS=Zea mays OX=4577 PE=2 SV=1	[more]
sp\|P06151\|LDHA_MOUSE	2.4e-94	56.13	L-lactate dehydrogenase A chain OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=3	[more]
sp\|P04642\|LDHA_RAT	1.2e-93	56.41	L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1	[more]

BLAST of CsGy5G004100 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3ATB9\|A0A1S3ATB9_CUCME	1.8e-187	98.00	L-lactate dehydrogenase OS=Cucumis melo OX=3656 GN=LOC103482619 PE=3 SV=1	[more]
tr\|A0A0A0KKU9\|A0A0A0KKU9_CUCSA	1.6e-180	95.14	L-lactate dehydrogenase OS=Cucumis sativus OX=3659 GN=Csa_5G161920 PE=3 SV=1	[more]
tr\|A0A067KUG8\|A0A067KUG8_JATCU	3.1e-168	86.00	L-lactate dehydrogenase OS=Jatropha curcas OX=180498 GN=JCGZ_03382 PE=3 SV=1	[more]
tr\|A0A2P5F5D0\|A0A2P5F5D0_9ROSA	2.0e-167	85.43	L-lactate dehydrogenase OS=Trema orientalis OX=63057 GN=TorRG33x02_112750 PE=3 S...	[more]
tr\|A0A2P5AVQ4\|A0A2P5AVQ4_PARAD	3.5e-167	85.71	L-lactate dehydrogenase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_295320 PE...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016491	oxidoreductase activity
GO:0004459	L-lactate dehydrogenase activity
GO:0003824	catalytic activity
GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm

Vocabulary: **Biological Process**
Term	Definition
GO:0005975	carbohydrate metabolic process
GO:0055114	oxidation-reduction process
GO:0019752	carboxylic acid metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR036291	NAD(P)-bd_dom_sf
IPR018177	L-lactate_DH_AS
IPR001236	Lactate/malate_DH_N
IPR022383	Lactate/malate_DH_C
IPR011304	L-lactate_DH
IPR015955	Lactate_DH/Glyco_Ohase_4_C
IPR001557	L-lactate/malate_DH

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0019752	carboxylic acid metabolic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0009651	response to salt stress
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0004459	L-lactate dehydrogenase activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G004100.1	CsGy5G004100.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001557	L-lactate/malate dehydrogenase	PRINTS	PR00086	LLDHDRGNASE	coord: 64..88 score: 51.92 coord: 205..218 score: 67.82 coord: 151..171 score: 68.93 coord: 175..193 score: 68.42 coord: 39..63 score: 48.2
IPR001557	L-lactate/malate dehydrogenase	PIRSF	PIRSF000102	Lac_mal_DH	coord: 34..350 e-value: 2.3E-103 score: 343.6
IPR015955	Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal	GENE3D	G3DSA:3.90.110.10		coord: 180..349 e-value: 1.5E-63 score: 215.3
IPR015955	Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal	SUPERFAMILY	SSF56327	LDH C-terminal domain-like	coord: 178..346
None	No IPR available	GENE3D	G3DSA:3.40.50.720		coord: 23..179 e-value: 2.2E-63 score: 214.7
None	No IPR available	PANTHER	PTHR43128:SF12	SUBFAMILY NOT NAMED	coord: 6..350
None	No IPR available	PANTHER	PTHR43128	FAMILY NOT NAMED	coord: 6..350
None	No IPR available	CDD	cd05293	LDH_1	coord: 35..347 e-value: 3.44731E-174 score: 489.038
IPR011304	L-lactate dehydrogenase	TIGRFAM	TIGR01771	TIGR01771	coord: 42..341 e-value: 6.8E-116 score: 384.7
IPR011304	L-lactate dehydrogenase	HAMAP	MF_00488	Lactate_dehydrog	coord: 37..349 score: 37.356
IPR022383	Lactate/malate dehydrogenase, C-terminal	PFAM	PF02866	Ldh_1_C	coord: 180..343 e-value: 8.3E-25 score: 87.5
IPR001236	Lactate/malate dehydrogenase, N-terminal	PFAM	PF00056	Ldh_1_N	coord: 38..177 e-value: 2.0E-43 score: 147.8
IPR018177	L-lactate dehydrogenase, active site	PROSITE	PS00064	L_LDH	coord: 207..213
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	SSF51735	NAD(P)-binding Rossmann-fold domains	coord: 24..177

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy5G004100	Cucumber (Chinese Long) v3	cgybcucB232
CsGy5G004100	Watermelon (97103) v2	cgybwmbB319
CsGy5G004100	Watermelon (97103) v2	cgybwmbB339
CsGy5G004100	Wax gourd	cgybwgoB414
CsGy5G004100	Cucumber (Gy14) v2	cgybcgybB090
CsGy5G004100	Cucurbita maxima (Rimu)	cgybcmaB608
CsGy5G004100	Cucurbita maxima (Rimu)	cgybcmaB640
CsGy5G004100	Cucurbita maxima (Rimu)	cgybcmaB695
CsGy5G004100	Cucurbita moschata (Rifu)	cgybcmoB583
CsGy5G004100	Cucurbita moschata (Rifu)	cgybcmoB619
CsGy5G004100	Cucurbita moschata (Rifu)	cgybcmoB675
CsGy5G004100	Cucurbita pepo (Zucchini)	cgybcpeB597
CsGy5G004100	Cucurbita pepo (Zucchini)	cgybcpeB687
CsGy5G004100	Cucurbita pepo (Zucchini)	cgybcpeB702
CsGy5G004100	Cucumber (Chinese Long) v2	cgybcuB211
CsGy5G004100	Cucumber (Chinese Long) v2	cgybcuB224
CsGy5G004100	Bottle gourd (USVL1VR-Ls)	cgyblsiB294
CsGy5G004100	Bottle gourd (USVL1VR-Ls)	cgyblsiB352
CsGy5G004100	Melon (DHL92) v3.5.1	cgybmeB298
CsGy5G004100	Melon (DHL92) v3.5.1	cgybmeB348
CsGy5G004100	Melon (DHL92) v3.6.1	cgybmedB298
CsGy5G004100	Watermelon (Charleston Gray)	cgybwcgB326
CsGy5G004100	Watermelon (Charleston Gray)	cgybwcgB332
CsGy5G004100	Watermelon (97103) v1	cgybwmB381
CsGy5G004100	Watermelon (97103) v1	cgybwmB348
CsGy5G004100	Wild cucumber (PI 183967)	cgybcpiB212
CsGy5G004100	Wild cucumber (PI 183967)	cgybcpiB226
CsGy5G004100	Silver-seed gourd	carcgybB0549
CsGy5G004100	Silver-seed gourd	carcgybB0911