CsGy5G004040 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy5G004040
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	14 kDa proline-rich protein DC2.15-like
Location	Chr5 : 2713882 .. 2717538 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCAAAGCTACAGCCTCTCTTGCCTTCCTTCTTTCTCTCAATCTCCTTTTCTTCACCCTTGTCTCATCATGTGACAATTGCTATGTGCCTGCCCCACCAAAGCCCGAGCCATACCCTCCATCTGATTATGGAAAGTGCCCTAAGGATGCCCTTAAAATCGGTGTTTGCGCCAAGCTTCTTGGCGGCCTTGTCGACCTTACCATCGGTAAGCCACCGGTGACCCCATGCTGCACTTTGGTTGAAGGGCTCGCTGATCTTGAAGCTGCTGTCTGTCTTTGCACTGCCATCAAGGCTAGCGTTTTGGGGAAAATGATTAAAATCCCACTCCACCTCAGCTTGCTCCTTAACGTTTGCAACAAGAATCTTCCCAATGGATTCCAATGCTGATTTTGGTCTCTCTTTTTTTCATTATGGAATTCTTTGAGTGTGTTATGATGTTTTTGGTTCTAAAGTTGTCTAAGTTTTAGACTTTATTTCAAATTGTTGTATGTTATGTTTAATTTTCTTCATTGGAGCTATTCTTTTTGGAGTTGAAATGTTTCAATAAAATTTTTTGCCGTATTGGTGAATTTATGATTTTTAGTTTTGCATATATATATTTGCTTTCTTATAAACATATTGAGAGAACCAGTGGAAGACAACGGATGACAAATCTTTCTCATATTAATTAAAAAACTACTACATTCTACAACATTTTTTTCTCTAGCTTTTGAACAAGTTTTGTTATATAAAACAATTATTTTTAGAAAATAAATCATTTCAAAATCTTAGTTTAGAACTATATAAATGTAAAACATATTTAAAGAACATTTTCAATTAACCTTAATTTCTCAAATTTAAATTGTTACGAAATATTATATGTGAGATGAGATGTCTAAAATGATAATTTAAATGAAAAATTAAATAGATAAAAACCTTAATATTTCTAATGTAAATCATCCAAAATAATTACTCTTATATTCAAGAATAAGGGTAAAATTCAAATTTGTTGTAAGTTTGATCTTATGAAAATTGTTAGTACTTAAATTGGAATAATGGTTCATTTCAGTTTTATGTAATAATTATTTACTCTACCATGAAGTAACAAAATATAATATGAAATTTAATCTGTAAAAATTATAAATAATTAAAATGTTAAAATTTTAAAATTCGAATACTAAATATCAAACTATAATAATTAAAATAATGTCTGATTAACTTGGTCCATTACCATATATGGCTTAAATTTATCAAGCCTGGATACTGGCTGCACTTTTAGGTTTAAAACTAAAATTTAATTAACTTGGTATCTTGCTTTCTAAAAGTAAATTTCTCATTGATTATTTTAAAAACCATAACACATCTTTAATATTGTGAAATGTTAACCAAATTTAACCACACTTTTTTATTTTCACAATATTTTAAGTGGGAGATCGGAATTAAAAGGTCTGCCCTCGATAATCTCTACTAGGTTGACATAATTATCTTTAACACTAGTCATCGTCAATCTTTCAAACCTATACAAAAAAATGTTATTATAAAATAAAGAAATTCGTCCAGACAAAGGAGAGAGTAAAGGGAAAGCTTTCCAATATAAAGCATAAGGATATAAATGAGTAACAGATAAAACAAGATTAGATCAGCTCCATTGATCCCATGAACAAAAGTATGTCTTTACACACGATTGATAAAATGATCATATTTTAATATAACTTTTGAAAAGAGATTGATCAGACGGGAGTCAATAAGTGCATTCAAACATCTTCACTGAACGGATATACCATATTGATAAATTGATCACATTCTAATATATTTTTTGAAAAGAGATTGATTAGACTGGGATCAATAAGTGCATTCAAACATCTTCACTGAGCGGATATACCATGATAAAAGAAGATTATAATTAATCACATTATTAATTAGAGGTAAGAAAAGTTTAATTTGGTTTGCTTTGATAATCGATTTAAAAAAATGATCATATCTCTGTGTTTTGTAACATATGAAACTTTACAAAATAATTTTATATTTTTAACCTTTTGACAATTGTTTAAAACTCAATATAACATGATAAATGGAAAGTTCCAAATCCTAAACTTCTAAAAAAAAATGAACATCTATGTTTCAACAATGTGCTATTCAACAATGTGCTATTGCTCAATTTTATGATGCTACGCTATTTTTTTTTATTTTTCTAAAGAAAAATTACACCTAACAAATCAATAGATGCTTTAGAATATCTCTATTGAACATTGACGTCTTCTTCACTTCAAAATATATACTTAATAGAGATTAATGAAGTTCATGATTTTATATATAAGTACATGATTGAGAATCTTTGGTTGAATTATTTCAAAGCTAGATGGCAAAATCTTAATACATGCATATTATTTTAACATAATTAATTAGGAATATAATCTTCAATTTCAATTTCAATTTCAATGCTAGCTAGATGGAAATTATTAAATACTAATAATAATGTTGTTTAATTTGTTGTTGAAAACTTACATGTTAGTGGGAGTGGTGTAAATATGGAGTATACTATTATACAAAAACCGAAAGAGAGTATAATATTTGCAAGTGAATTTAATTAAACATATACACACACATATATGTTTATAAATATAAGACATGTGAAACATCCTATCTCTCTTTTCTTTATGCAACTTATCAAATTTATTTTATAGACTCTATTTTACATCTATAATTGTCCATTAATATTCATATTATAACTACAACTAAGTCCAGCCAAATTATTGAATTACATTTAATTTGTTCAATATATGTAAGCATAGAAGATTTTCTTGAACATACTTCTCACGAATATAGAGAAATTAAATTGGTATATTCCTATAACAGATCATATATACATTATTCAATCTCCCCCACACGTTAGTTCTAATGTTATCACTTATTATTATTATTATTTTGGTACAATAATTTGCACGATGATTGACCCCGAACCAGAGAAAAGGATATAAAAACTATATTACCACTTGAACTATTAAGTACAAGGGGAAAAAATAACTCAACACCTGCAACATTATTTCTAGAGCAGGGAGGTTGTGTAGCAATTTTAAGAACAATAATTTAAGTATATAATGAATATTTTTCAAAAAATACAAATATAACAAAATCTATTAACAATACTTTTATGATTTTCCATTCATAAATTTTGATAAATTTTGCTAGATTTACCATTTTTTAAAATGATTTTCCATTCATAAATTTTGATAAATTTTGCTAGATTTACCATTTTTTAAAATGATGCTATGCATACTAATATTTTCAATCTAATTATTATATTTACAATTATTTTAATTTTTTTAACAAAATAATAAAAGAGTGAAATTAAGAAATGCACCCAAATATCTCAAATATGTTTGACATACCTTACCTTCTCATCAAACCTTGAAAATTATTCTACTCTATGTTAAATCATTACATGGCCTAGGAACCTAAGAATCTAAGAAAACAAGAACACAATTTCCTTTTATCCCAAATCCCAAAAAATCTTAATCTCAAGTCAACATTTAATTTCATAAATTTGTTATGTATCCGAAGATTGAGGGAAGAAAATATGGGAAATTCCCCATGCCAGAAATGTCCAAAATTAAGTTTGCATAAACTTCAGAGCTTTAGGAATTAAAATCATCACACATGGATGATGGGTGA

mRNA sequence

ATGGCTTCCAAAGCTACAGCCTCTCTTGCCTTCCTTCTTTCTCTCAATCTCCTTTTCTTCACCCTTGTCTCATCATGTGACAATTGCTATGTGCCTGCCCCACCAAAGCCCGAGCCATACCCTCCATCTGATTATGGAAAGTGCCCTAAGGATGCCCTTAAAATCGGTGTTTGCGCCAAGCTTCTTGGCGGCCTTGTCGACCTTACCATCGGTAAGCCACCGGTGACCCCATGCTGCACTTTGGTTGAAGGGCTCGCTGATCTTGAAGCTGCTGTCTGTCTTTGCACTGCCATCAAGGCTAGCGTTTTGGGGAAAATGATTAAAATCCCACTCCACCTCAGCTTGCTCCTTAACGAATTAAAATCATCACACATGGATGATGGGTGA

Coding sequence (CDS)

ATGGCTTCCAAAGCTACAGCCTCTCTTGCCTTCCTTCTTTCTCTCAATCTCCTTTTCTTCACCCTTGTCTCATCATGTGACAATTGCTATGTGCCTGCCCCACCAAAGCCCGAGCCATACCCTCCATCTGATTATGGAAAGTGCCCTAAGGATGCCCTTAAAATCGGTGTTTGCGCCAAGCTTCTTGGCGGCCTTGTCGACCTTACCATCGGTAAGCCACCGGTGACCCCATGCTGCACTTTGGTTGAAGGGCTCGCTGATCTTGAAGCTGCTGTCTGTCTTTGCACTGCCATCAAGGCTAGCGTTTTGGGGAAAATGATTAAAATCCCACTCCACCTCAGCTTGCTCCTTAACGAATTAAAATCATCACACATGGATGATGGGTGA

Protein sequence

MASKATASLAFLLSLNLLFFTLVSSCDNCYVPAPPKPEPYPPSDYGKCPKDALKIGVCAKLLGGLVDLTIGKPPVTPCCTLVEGLADLEAAVCLCTAIKASVLGKMIKIPLHLSLLLNELKSSHMDDG

Homology

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BLAST of CsGy5G004040 vs. NCBI nr
Match: XP_004152413.2 (PREDICTED: 14 kDa proline-rich protein DC2.15-like [Cucumis sativus] >KGN50238.1 hypothetical protein Csa_5G161870 [Cucumis sativus])

HSP 1 Score: 234.2 bits (596), Expect = 2.5e-58
Identity = 117/118 (99.15%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MASKATASLAFLLSLNLLFFTLVSSCDNCYVPAPPKPEPYPPSDYGKCPKDALKIGVCAK 60
           MASKATASLAFLLSLNLLFFTLVSSCDNCYVPAPPKPEPYPPSDYGKCPKDALKIGVCAK
Sbjct: 1   MASKATASLAFLLSLNLLFFTLVSSCDNCYVPAPPKPEPYPPSDYGKCPKDALKIGVCAK 60

Query: 61  LLGGLVDLTIGKPPVTPCCTLVEGLADLEAAVCLCTAIKASVLGKMIKIPLHLSLLLN 119
           LLGGLVDLTIGKPPVTPCCTLVEGLADLEAAVCLCTAIKASVLGKMIKIPLHLSLL+N
Sbjct: 61  LLGGLVDLTIGKPPVTPCCTLVEGLADLEAAVCLCTAIKASVLGKMIKIPLHLSLLIN 118

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BLAST of CsGy5G004040 vs. NCBI nr
Match: XP_008437105.1 (PREDICTED: 14 kDa proline-rich protein DC2.15-like [Cucumis melo])

HSP 1 Score: 216.9 bits (551), Expect = 4.1e-53
Identity = 112/124 (90.32%), Postives = 114/124 (91.94%), Query Frame = 0


Query: 1   MASKATASLAFLLSLNLLFFTLVSSCDNCYVPAPPKPEPY------PPSDYGKCPKDALK 60
           MASKAT+SLAFLLSLNLLFFTLVSSCDNCYVP PPKPEPY      PPSDY KCPKDALK
Sbjct: 1   MASKATSSLAFLLSLNLLFFTLVSSCDNCYVPIPPKPEPYPPTNPNPPSDYRKCPKDALK 60

Query: 61  IGVCAKLLGGLVDLTIGKPPVTPCCTLVEGLADLEAAVCLCTAIKASVLGKMIKIPLHLS 119
           IGVCAKLLGGLVDLTIGKPPVTPCCTLV+GLADLEAAVCLCTAIKASVLG  IKIPLHLS
Sbjct: 61  IGVCAKLLGGLVDLTIGKPPVTPCCTLVQGLADLEAAVCLCTAIKASVLGNKIKIPLHLS 120

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BLAST of CsGy5G004040 vs. NCBI nr
Match: XP_011654795.1 (PREDICTED: 14 kDa proline-rich protein DC2.15-like [Cucumis sativus] >KGN50237.1 hypothetical protein Csa_5G161860 [Cucumis sativus])

HSP 1 Score: 215.3 bits (547), Expect = 1.2e-52
Identity = 111/124 (89.52%), Postives = 115/124 (92.74%), Query Frame = 0


Query: 1   MASKATASLAFLLSLNLLFFTLVSSCDNCYVPAPPKP------EPYPPSDYGKCPKDALK 60
           MASKATASLAFLLSLNLLFFT VS+CDNCYVPAPPKP      +P PPS+YGKCPKDALK
Sbjct: 1   MASKATASLAFLLSLNLLFFTFVSACDNCYVPAPPKPKPCXPTKPNPPSNYGKCPKDALK 60

Query: 61  IGVCAKLLGGLVDLTIGKPPVTPCCTLVEGLADLEAAVCLCTAIKASVLGKMIKIPLHLS 119
           IGVCAKLLGGLVDLTIGKPPVTPCCTLV+GLADLEAAVCLCTAIKASVLGK IKIPLHLS
Sbjct: 61  IGVCAKLLGGLVDLTIGKPPVTPCCTLVQGLADLEAAVCLCTAIKASVLGKTIKIPLHLS 120

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BLAST of CsGy5G004040 vs. NCBI nr
Match: XP_008437102.1 (PREDICTED: 14 kDa proline-rich protein DC2.15-like [Cucumis melo])

HSP 1 Score: 213.0 bits (541), Expect = 5.9e-52
Identity = 110/124 (88.71%), Postives = 113/124 (91.13%), Query Frame = 0


Query: 1   MASKATASLAFLLSLNLLFFTLVSSCDNCYVPAPPKP------EPYPPSDYGKCPKDALK 60
           MASKATASLAFLLSLNLLFFT VS+CDNCYVPAPPKP      +P PPS+YGKCPKD LK
Sbjct: 1   MASKATASLAFLLSLNLLFFTFVSACDNCYVPAPPKPKPCXPTKPNPPSNYGKCPKDTLK 60

Query: 61  IGVCAKLLGGLVDLTIGKPPVTPCCTLVEGLADLEAAVCLCTAIKASVLGKMIKIPLHLS 119
           IGVCAKLLGGLVDLTIGKPPVTPCCTLVEGLADLEAAVCLCTAIKASVLG  IKIPLHLS
Sbjct: 61  IGVCAKLLGGLVDLTIGKPPVTPCCTLVEGLADLEAAVCLCTAIKASVLGNKIKIPLHLS 120

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BLAST of CsGy5G004040 vs. NCBI nr
Match: XP_004152411.2 (PREDICTED: 14 kDa proline-rich protein DC2.15-like [Cucumis sativus] >KGN50240.1 hypothetical protein Csa_5G161890 [Cucumis sativus])

HSP 1 Score: 209.9 bits (533), Expect = 5.0e-51
Identity = 108/124 (87.10%), Postives = 113/124 (91.13%), Query Frame = 0


Query: 1   MASKATASLAFLLSLNLLFFTLVSSCDNCYVPAPPKP------EPYPPSDYGKCPKDALK 60
           MASKA+ASLAFLLSLNLLFFT VS+CDNCYVPAPPKP      +P PPS+YGKCPKD LK
Sbjct: 1   MASKASASLAFLLSLNLLFFTFVSACDNCYVPAPPKPKPCXXTKPNPPSNYGKCPKDTLK 60

Query: 61  IGVCAKLLGGLVDLTIGKPPVTPCCTLVEGLADLEAAVCLCTAIKASVLGKMIKIPLHLS 119
           IGVCAKLLGGLVDLTIGKPPVTPCCTLV+GLADLEAAVCLCTAIKASVLG  IKIPLHLS
Sbjct: 61  IGVCAKLLGGLVDLTIGKPPVTPCCTLVKGLADLEAAVCLCTAIKASVLGNKIKIPLHLS 120

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BLAST of CsGy5G004040 vs. TAIR10
Match: AT1G12090.1 (extensin-like protein)

HSP 1 Score: 124.8 bits (312), Expect = 3.9e-29
Identity = 64/124 (51.61%), Postives = 85/124 (68.55%), Query Frame = 0


Query: 5   ATASLAFLLSLNLLFFTLVSSCDNC----------YVPAPPKPEPYPPSDYGKCPKDALK 64
           A++S+A  L+LNLLFFT +S+C +C                           KCPKD LK
Sbjct: 2   ASSSIALFLALNLLFFTTISACGSCTPCGGGXXXXXXXXXXXXXXXXXXXXXKCPKDTLK 61

Query: 65  IGVCAKLLGGLVDLTIGKPPVTPCCTLVEGLADLEAAVCLCTAIKASVLGKMIKIPLHLS 119
           +GVCA +L GL+DLT+GKPPV PCC+L++GLAD+EAAVCLCTA+KA++LG  + +P+ LS
Sbjct: 62  LGVCANVLNGLLDLTLGKPPVEPCCSLIQGLADVEAAVCLCTALKANILGINLNLPISLS 121

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BLAST of CsGy5G004040 vs. TAIR10
Match: AT1G62510.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 122.5 bits (306), Expect = 1.9e-28
Identity = 68/137 (49.64%), Postives = 84/137 (61.31%), Query Frame = 0


Query: 1   MASKATASLAFLLSLNLLFFTLVSSCDN-------------------CYVPAPPKPEPYP 60
           MAS+ T SLA  L LN LFFT +S+C N                                
Sbjct: 1   MASRTTKSLALFLILNFLFFTTISACGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  PSDYGKCPKDALKIGVCAKLLGGLVDLTIGKPPVTPCCTLVEGLADLEAAVCLCTAIKAS 119
                KCP+DALK+GVCA +L GL+++T+GKPPV PCCTL++GLADLEAA CLCTA+KA+
Sbjct: 61  XXXXXKCPRDALKLGVCANVLNGLLNVTLGKPPVEPCCTLIQGLADLEAAACLCTALKAN 120

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BLAST of CsGy5G004040 vs. TAIR10
Match: AT4G12520.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 113.2 bits (282), Expect = 1.2e-25
Identity = 60/118 (50.85%), Postives = 77/118 (65.25%), Query Frame = 0


Query: 1   MASKATASLAFLLSLNLLFFTLVSSCDNCYVPAPPKPEPYPPSDYGKCPKDALKIGVCAK 60
           MASK +ASL   L+ N+LFFTL ++C                +  G CPKD LK+GVCA 
Sbjct: 1   MASKISASLVIFLTFNILFFTLTTACGGXXXXXXXXXXXXXXT--GSCPKDTLKLGVCAN 60

Query: 61  LLGGLVDLTIGKPPVTPCCTLVEGLADLEAAVCLCTAIKASVLGKMIKIPLHLSLLLN 119
           +L  L+ + +G PPV PCC+L+ GL DLEAA CLCTA+KA VLG  + +P+ LSLLLN
Sbjct: 61  VLKDLLKIQLGTPPVKPCCSLLNGLVDLEAAACLCTALKAKVLGINLNVPVSLSLLLN 116

[Close]

BLAST of CsGy5G004040 vs. TAIR10
Match: AT4G12510.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 113.2 bits (282), Expect = 1.2e-25
Identity = 60/118 (50.85%), Postives = 77/118 (65.25%), Query Frame = 0


Query: 1   MASKATASLAFLLSLNLLFFTLVSSCDNCYVPAPPKPEPYPPSDYGKCPKDALKIGVCAK 60
           MASK +ASL   L+ N+LFFTL ++C                +  G CPKD LK+GVCA 
Sbjct: 1   MASKISASLVIFLTFNILFFTLTTACGGXXXXXXXXXXXXXXT--GSCPKDTLKLGVCAN 60

Query: 61  LLGGLVDLTIGKPPVTPCCTLVEGLADLEAAVCLCTAIKASVLGKMIKIPLHLSLLLN 119
           +L  L+ + +G PPV PCC+L+ GL DLEAA CLCTA+KA VLG  + +P+ LSLLLN
Sbjct: 61  VLKDLLKIQLGTPPVKPCCSLLNGLVDLEAAACLCTALKAKVLGINLNVPVSLSLLLN 116

[Close]

BLAST of CsGy5G004040 vs. TAIR10
Match: AT1G12100.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 105.5 bits (262), Expect = 2.4e-23
Identity = 55/112 (49.11%), Postives = 73/112 (65.18%), Query Frame = 0


Query: 8   SLAFLLSLNLLFFTLVSSCDNCYVPAP-PKPEPYPPSDYGKCPKDALKIGVCAKLLGGLV 67
           S A  +S NL+FF  VS C+ C+ P P P   P        C +DA+K+GVCAK+L   V
Sbjct: 8   SEALFISFNLMFFAHVSGCNTCFPPTPIPNLNPISNPTTPSCSRDAIKLGVCAKILDVAV 67

Query: 68  DLTIGKPPVTPCCTLVEGLADLEAAVCLCTAIKASVLGKMIKIPLHLSLLLN 119
              IG P  T CC++++GL DL+AAVCLCT IKA++LG  I +P+ LSLL+N
Sbjct: 68  GTVIGNPSDTLCCSVLQGLVDLDAAVCLCTTIKANILGINIDLPISLSLLIN 119

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BLAST of CsGy5G004040 vs. Swiss-Prot
Match: sp|P14009|14KD_DAUCA (14 kDa proline-rich protein DC2.15 OS=Daucus carota OX=4039 PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 2.9e-26
Identity = 65/131 (49.62%), Postives = 86/131 (65.65%), Query Frame = 0


Query: 1   MASKATASLAFLLSLNLLFFTLVSSCDNCYVPAPPKPEPYPPSDY-------------GK 60
           M SK +AS+A   +LN+LFF LVSS + C       P+PY                  GK
Sbjct: 1   MGSKNSASVALFFTLNILFFALVSSTEKC-------PDPYXXXXXXXXXXXXXXXXXAGK 60

Query: 61  CPKDALKIGVCAKLLGGLVDLTIGKPPVTPCCTLVEGLADLEAAVCLCTAIKASVLGKMI 119
           CP+DALK+GVCA +L  + ++ IG PP  PCC+L+EGL +LEAAVCLCTAIKA++LGK +
Sbjct: 61  CPRDALKLGVCADVLNLVHNVVIGSPPTLPCCSLLEGLVNLEAAVCLCTAIKANILGKNL 120

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BLAST of CsGy5G004040 vs. Swiss-Prot
Match: sp|Q9SU33|ERLL3_ARATH (pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g12500 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.3e-21
Identity = 61/165 (36.97%), Postives = 86/165 (52.12%), Query Frame = 0


Query: 1   MASKATASLAFLLSLNLLFFTLVSSCDNCYVPAPPKPEPYP------------------- 60
           MASK + SLA   +LN+LFFTL ++ D C     PKP   P                   
Sbjct: 1   MASKNSTSLALFFALNILFFTLTTATD-CRCNLSPKPRTVPSPXXXXXXXXXXXXXXXXX 60

Query: 61  ----------------------------PSDYGKCPKDALKIGVCAKLLGGLVDLTIGKP 119
                                       P   G CP DAL++GVCA +L GL+++ +G+P
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXPRTPGSSGNCPIDALRLGVCANVLSGLLNVQLGQP 120

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BLAST of CsGy5G004040 vs. Swiss-Prot
Match: sp|Q9S7I2|AIR1_ARATH (Putative lipid-binding protein AIR1 OS=Arabidopsis thaliana OX=3702 GN=AIR1 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.7e-21
Identity = 58/111 (52.25%), Postives = 76/111 (68.47%), Query Frame = 0


Query: 9   LAFLLSLNLLFFTLVSSCDNCYVPAPPKPEPYPPSDYGKCPKDALKIGVCAKLLGGLVDL 68
           LA  +SLNLLFFT                  Y  +  G CPK++++IG C  +L  LVDL
Sbjct: 7   LALFVSLNLLFFT------------------YTSATTGTCPKNSIEIGTCVTVL-NLVDL 66

Query: 69  TIGKPPVTPCCTLVEGLADLEAAVCLCTAIKASVLGKM-IKIPLHLSLLLN 119
           T+G PPV PCC+L++GLADLEAAVCLCTA+KAS+LG + I +P++LS+LLN
Sbjct: 67  TLGNPPVKPCCSLIQGLADLEAAVCLCTAVKASILGIVNINLPINLSVLLN 98

[Close]

BLAST of CsGy5G004040 vs. Swiss-Prot
Match: sp|Q39176|ERLI1_ARATH (Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana OX=3702 GN=EARLI1 PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 3.1e-20
Identity = 59/156 (37.82%), Postives = 87/156 (55.77%), Query Frame = 0


Query: 1   MASKATASLAFLLSLNLLFFTLVSSCDNCYVPAPPKPEPYP------------------- 60
           MASK +AS+A   +LN++FFTL ++ D C     PK +P                     
Sbjct: 1   MASKNSASIALFFALNIIFFTLTAATD-CGCNPSPKHKPXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  -PS------------------DYGKCPKDALKIGVCAKLLGGLVDLTIGKPPVTPCCTLV 119
            PS                    G CP DAL++GVCA +L  L+++ +G+P   PCC+L+
Sbjct: 61  VPSXXXXXXXXXXXXXXXXXXXXGNCPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLI 120

[Close]

BLAST of CsGy5G004040 vs. Swiss-Prot
Match: sp|Q9SU34|ERLL2_ARATH (pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g12490 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.2e-19
Identity = 44/84 (52.38%), Postives = 63/84 (75.00%), Query Frame = 0


Query: 35  PKPEPYPPSDYGKCPKDALKIGVCAKLLGGLVDLTIGKPPVTPCCTLVEGLADLEAAVCL 94
           P   P  P   G CP DAL++GVCA +L GL+++ +G+P   PCC+L++GL DL+AAVCL
Sbjct: 86  PVIPPRTPGSSGNCPIDALRLGVCANVLSGLLNVQLGQPSPQPCCSLIQGLVDLDAAVCL 145

Query: 95  CTAIKASVLGKMIKIPLHLSLLLN 119
           CTA++A+VLG  + +P+ LS+LLN
Sbjct: 146 CTALRANVLGINLNVPISLSVLLN 169

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BLAST of CsGy5G004040 vs. TrEMBL
Match: tr|A0A0A0KKU4|A0A0A0KKU4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G161870 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.6e-58
Identity = 117/118 (99.15%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MASKATASLAFLLSLNLLFFTLVSSCDNCYVPAPPKPEPYPPSDYGKCPKDALKIGVCAK 60
           MASKATASLAFLLSLNLLFFTLVSSCDNCYVPAPPKPEPYPPSDYGKCPKDALKIGVCAK
Sbjct: 1   MASKATASLAFLLSLNLLFFTLVSSCDNCYVPAPPKPEPYPPSDYGKCPKDALKIGVCAK 60

Query: 61  LLGGLVDLTIGKPPVTPCCTLVEGLADLEAAVCLCTAIKASVLGKMIKIPLHLSLLLN 119
           LLGGLVDLTIGKPPVTPCCTLVEGLADLEAAVCLCTAIKASVLGKMIKIPLHLSLL+N
Sbjct: 61  LLGGLVDLTIGKPPVTPCCTLVEGLADLEAAVCLCTAIKASVLGKMIKIPLHLSLLIN 118

[Close]

BLAST of CsGy5G004040 vs. TrEMBL
Match: tr|A0A1S3ASV0|A0A1S3ASV0_CUCME (14 kDa proline-rich protein DC2.15-like OS=Cucumis melo OX=3656 GN=LOC103482623 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 2.7e-53
Identity = 112/124 (90.32%), Postives = 114/124 (91.94%), Query Frame = 0


Query: 1   MASKATASLAFLLSLNLLFFTLVSSCDNCYVPAPPKPEPY------PPSDYGKCPKDALK 60
           MASKAT+SLAFLLSLNLLFFTLVSSCDNCYVP PPKPEPY      PPSDY KCPKDALK
Sbjct: 1   MASKATSSLAFLLSLNLLFFTLVSSCDNCYVPIPPKPEPYPPTNPNPPSDYRKCPKDALK 60

Query: 61  IGVCAKLLGGLVDLTIGKPPVTPCCTLVEGLADLEAAVCLCTAIKASVLGKMIKIPLHLS 119
           IGVCAKLLGGLVDLTIGKPPVTPCCTLV+GLADLEAAVCLCTAIKASVLG  IKIPLHLS
Sbjct: 61  IGVCAKLLGGLVDLTIGKPPVTPCCTLVQGLADLEAAVCLCTAIKASVLGNKIKIPLHLS 120

[Close]

BLAST of CsGy5G004040 vs. TrEMBL
Match: tr|A0A0A0KP86|A0A0A0KP86_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G161860 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 7.9e-53
Identity = 111/124 (89.52%), Postives = 115/124 (92.74%), Query Frame = 0


Query: 1   MASKATASLAFLLSLNLLFFTLVSSCDNCYVPAPPKP------EPYPPSDYGKCPKDALK 60
           MASKATASLAFLLSLNLLFFT VS+CDNCYVPAPPKP      +P PPS+YGKCPKDALK
Sbjct: 1   MASKATASLAFLLSLNLLFFTFVSACDNCYVPAPPKPKPCXPTKPNPPSNYGKCPKDALK 60

Query: 61  IGVCAKLLGGLVDLTIGKPPVTPCCTLVEGLADLEAAVCLCTAIKASVLGKMIKIPLHLS 119
           IGVCAKLLGGLVDLTIGKPPVTPCCTLV+GLADLEAAVCLCTAIKASVLGK IKIPLHLS
Sbjct: 61  IGVCAKLLGGLVDLTIGKPPVTPCCTLVQGLADLEAAVCLCTAIKASVLGKTIKIPLHLS 120

[Close]

BLAST of CsGy5G004040 vs. TrEMBL
Match: tr|A0A1S3ATS5|A0A1S3ATS5_CUCME (14 kDa proline-rich protein DC2.15-like OS=Cucumis melo OX=3656 GN=LOC103482621 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 3.9e-52
Identity = 110/124 (88.71%), Postives = 113/124 (91.13%), Query Frame = 0


Query: 1   MASKATASLAFLLSLNLLFFTLVSSCDNCYVPAPPKP------EPYPPSDYGKCPKDALK 60
           MASKATASLAFLLSLNLLFFT VS+CDNCYVPAPPKP      +P PPS+YGKCPKD LK
Sbjct: 1   MASKATASLAFLLSLNLLFFTFVSACDNCYVPAPPKPKPCXPTKPNPPSNYGKCPKDTLK 60

Query: 61  IGVCAKLLGGLVDLTIGKPPVTPCCTLVEGLADLEAAVCLCTAIKASVLGKMIKIPLHLS 119
           IGVCAKLLGGLVDLTIGKPPVTPCCTLVEGLADLEAAVCLCTAIKASVLG  IKIPLHLS
Sbjct: 61  IGVCAKLLGGLVDLTIGKPPVTPCCTLVEGLADLEAAVCLCTAIKASVLGNKIKIPLHLS 120

[Close]

BLAST of CsGy5G004040 vs. TrEMBL
Match: tr|A0A0A0KKL9|A0A0A0KKL9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G161890 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 3.3e-51
Identity = 108/124 (87.10%), Postives = 113/124 (91.13%), Query Frame = 0


Query: 1   MASKATASLAFLLSLNLLFFTLVSSCDNCYVPAPPKP------EPYPPSDYGKCPKDALK 60
           MASKA+ASLAFLLSLNLLFFT VS+CDNCYVPAPPKP      +P PPS+YGKCPKD LK
Sbjct: 1   MASKASASLAFLLSLNLLFFTFVSACDNCYVPAPPKPKPCXXTKPNPPSNYGKCPKDTLK 60

Query: 61  IGVCAKLLGGLVDLTIGKPPVTPCCTLVEGLADLEAAVCLCTAIKASVLGKMIKIPLHLS 119
           IGVCAKLLGGLVDLTIGKPPVTPCCTLV+GLADLEAAVCLCTAIKASVLG  IKIPLHLS
Sbjct: 61  IGVCAKLLGGLVDLTIGKPPVTPCCTLVKGLADLEAAVCLCTAIKASVLGNKIKIPLHLS 120

The following BLAST results are available for this feature:

BLAST of CsGy5G004040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152413.2	2.5e-58	99.15	PREDICTED: 14 kDa proline-rich protein DC2.15-like [Cucumis sativus] >KGN50238.1...	[more]
XP_008437105.1	4.1e-53	90.32	PREDICTED: 14 kDa proline-rich protein DC2.15-like [Cucumis melo]	[more]
XP_011654795.1	1.2e-52	89.52	PREDICTED: 14 kDa proline-rich protein DC2.15-like [Cucumis sativus] >KGN50237.1...	[more]
XP_008437102.1	5.9e-52	88.71	PREDICTED: 14 kDa proline-rich protein DC2.15-like [Cucumis melo]	[more]
XP_004152411.2	5.0e-51	87.10	PREDICTED: 14 kDa proline-rich protein DC2.15-like [Cucumis sativus] >KGN50240.1...	[more]

BLAST of CsGy5G004040 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G12090.1	3.9e-29	51.61	extensin-like protein	[more]
AT1G62510.1	1.9e-28	49.64	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT4G12520.1	1.2e-25	50.85	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT4G12510.1	1.2e-25	50.85	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G12100.1	2.4e-23	49.11	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

BLAST of CsGy5G004040 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P14009\|14KD_DAUCA	2.9e-26	49.62	14 kDa proline-rich protein DC2.15 OS=Daucus carota OX=4039 PE=2 SV=1	[more]
sp\|Q9SU33\|ERLL3_ARATH	1.3e-21	36.97	pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g125...	[more]
sp\|Q9S7I2\|AIR1_ARATH	1.7e-21	52.25	Putative lipid-binding protein AIR1 OS=Arabidopsis thaliana OX=3702 GN=AIR1 PE=2...	[more]
sp\|Q39176\|ERLI1_ARATH	3.1e-20	37.82	Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana OX=3702 GN=EARLI1 PE=1 SV...	[more]
sp\|Q9SU34\|ERLL2_ARATH	1.2e-19	52.38	pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g124...	[more]

BLAST of CsGy5G004040 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KKU4\|A0A0A0KKU4_CUCSA	1.6e-58	99.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G161870 PE=4 SV=1	[more]
tr\|A0A1S3ASV0\|A0A1S3ASV0_CUCME	2.7e-53	90.32	14 kDa proline-rich protein DC2.15-like OS=Cucumis melo OX=3656 GN=LOC103482623 ...	[more]
tr\|A0A0A0KP86\|A0A0A0KP86_CUCSA	7.9e-53	89.52	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G161860 PE=4 SV=1	[more]
tr\|A0A1S3ATS5\|A0A1S3ATS5_CUCME	3.9e-52	88.71	14 kDa proline-rich protein DC2.15-like OS=Cucumis melo OX=3656 GN=LOC103482621 ...	[more]
tr\|A0A0A0KKL9\|A0A0A0KKL9_CUCSA	3.3e-51	87.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G161890 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036312	Bifun_inhib/LTP/seed_sf
IPR027923	Hydrophob_seed

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G004040.1	CsGy5G004040.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 44..126 e-value: 3.1E-20 score: 73.7
None	No IPR available	PANTHER	PTHR31731	FAMILY NOT NAMED	coord: 1..121
None	No IPR available	PANTHER	PTHR31731:SF7	SUBFAMILY NOT NAMED	coord: 1..121
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..26 score: 5.0
IPR027923	Hydrophobic seed protein	PFAM	PF14547	Hydrophob_seed	coord: 47..118 e-value: 9.2E-22 score: 76.9
IPR027923	Hydrophobic seed protein	CDD	cd01958	HPS_like	coord: 46..110 e-value: 6.56566E-20 score: 77.754
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 51..118

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy5G004040	Cla011574	Watermelon (97103) v1	cgybwmB381
CsGy5G004040	Csa5G161870	Cucumber (Chinese Long) v2	cgybcuB224
CsGy5G004040	CSPI05G06730	Wild cucumber (PI 183967)	cgybcpiB226
CsGy5G004040	CmoCh15G011890	Cucurbita moschata (Rifu)	cgybcmoB583

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy5G004040	Cucumber (Gy14) v2	cgybcgybB090
CsGy5G004040	Cucurbita maxima (Rimu)	cgybcmaB608
CsGy5G004040	Cucurbita maxima (Rimu)	cgybcmaB640
CsGy5G004040	Cucurbita maxima (Rimu)	cgybcmaB695
CsGy5G004040	Cucurbita moschata (Rifu)	cgybcmoB619
CsGy5G004040	Cucurbita moschata (Rifu)	cgybcmoB675
CsGy5G004040	Cucurbita pepo (Zucchini)	cgybcpeB597
CsGy5G004040	Cucurbita pepo (Zucchini)	cgybcpeB687
CsGy5G004040	Cucurbita pepo (Zucchini)	cgybcpeB702
CsGy5G004040	Cucumber (Chinese Long) v2	cgybcuB211
CsGy5G004040	Bottle gourd (USVL1VR-Ls)	cgyblsiB294
CsGy5G004040	Bottle gourd (USVL1VR-Ls)	cgyblsiB352
CsGy5G004040	Melon (DHL92) v3.5.1	cgybmeB298
CsGy5G004040	Melon (DHL92) v3.5.1	cgybmeB348
CsGy5G004040	Melon (DHL92) v3.6.1	cgybmedB298
CsGy5G004040	Watermelon (Charleston Gray)	cgybwcgB326
CsGy5G004040	Watermelon (Charleston Gray)	cgybwcgB332
CsGy5G004040	Watermelon (97103) v1	cgybwmB348
CsGy5G004040	Wild cucumber (PI 183967)	cgybcpiB212
CsGy5G004040	Silver-seed gourd	carcgybB0911
CsGy5G004040	Cucumber (Chinese Long) v3	cgybcucB232
CsGy5G004040	Watermelon (97103) v2	cgybwmbB319
CsGy5G004040	Watermelon (97103) v2	cgybwmbB339
CsGy5G004040	Wax gourd	cgybwgoB414