CsGy5G002580 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTAAATGTCAATTACACTAATAAAACACATAATTAAAAAATAGACATGAAAATAAGTCTCTCTATTTCGTTGTATTAAATCTTATATTAAAAAAGACACATAGCTTAAATTTAAACCAAAAAGTAAAAGAAGAGAATAGAACACTAATTTTCAGTCTATAAAAACACTCCACCTGCTAACCTTCTCCTTCTACCTTCTTCCTAAAAGCTAAAGGAAAACAAAACCCCATTAACAGGAGAGAGAAATCTCATTCTAGAGTGAGAGAAGAGAACCTCCCTTGTTACATTTTCTAAGCAAAACTCAGCAAAGAAGAAGAATAAGAAAATGGAGGGGAAAGAAGAGGACGTGAAGCTAGGAGCAAACAAGTTCTCAGAAAGGCAGCCAATTGGCACATCGGCGCAGACGGACAAGGACTACAAAGAGCCACCGCCGGCGCCACTGTACGAGCCGGGCGAGCTGAAGTCATGGTCGTTTTACAGAGCCGGAATCGCGGAGTTTATGGCCACTTTCTTGTTCCTCTACATCACCATCTTGACGGTGATGGGAGTCAACCGATCTCCGTCCAAATGCAACAGCGTCGGCATTCAGGGCATTGCTTGGGCCTTCGGCGGCATGATCTTCGCCCTCGTCTACTGCACCGCCGGCATCTCCGGTAAAACCCTGAAACCTAAACCACTGTCTTGTTCCGTTTTGTTCTTAGATCTGTATGGTGTTTGGAAGTATTGTATAGGGTTTGGATGAAACTCTTAACTTTGTTCATTTTAGTTACTTAATCTTTAGTTTGTTTATTTAAAGGATTATTTCGTTTTCTTTAGTGTGTGTTCTGCAACAAAATATTTATTTATTTATTTTGAAGATCTTGAGACCATAATTAAGCTTTCCCGAAGATATAATTAAGGGAAATATTATGTTAAATGATTATTTAAGCTTAAAGTTTGAACATGAAGAGCTATAATAATTAAATGAACTTATATGCGATGTATTATTACGAGTTAGTTTGATAATTATTGTGGTAAATCCTTATTTTGGTTTGGGTATGTTTTCTTCTCAGGTGGGCACATTAATCCGGCAGTGACCTTCGGGCTTTTCCTGGCCAGAAAACTGTCCCTCACAAGAGCAGTATTCTACATCATAATGCAATGCCTCGGCGCCATCTGCGGCGCCGGCGTCGTCAAGGGCTTCGAGGGGTCCTCCTACGTGCAGAAGCTCGGTGGTGCCAACTTCGTGTCCTCTGGCTACACCAAGGGTAGCGGTCTTGGTGCTGAGATCATCGGTACCTTCGTTCTCGTCTACACCGTCTTCTCCGCCACCGATGCTAAGAGAAATGCCAGAGATTCTCACGTCCCTGTAAGTTTTGTTGTTTTCTTTTTTAACCGTTAGGTTGGATATTATTCAGTTGTCTATAAATAAAATATGGATTTTGTTTGTAGATTTTGGCTCCTCTTCCCATTGGGTTTGCAGTGTTTTTGGTCCATTTGGCCACCATTCCCATCACCGGAACCGGCATTAATCCGGCCAGGAGTCTCGGAGCTGCCATCATCTACAACAGGCAACACGCTTGGGATGACCATGTAAGTACAACCCTTTGAAAGTCTAATTACCTTTTTAGCCTTTAGTTTTACTATTTTGTTAATCCACAAATTTGTTGTTTTTCTTGCCCTTAAAAGACAAAAGGGGTAAAATGGTAAATTAATATGCAAACCAAAGTAAACTAGAATATTAATTTTTGAAGTCATGTTTGGAAGAGATTTTAAAATGGCTAAAAATAAAATTGCTATTTTCTAAATAACTATGAAACATGTTTTTAATTTTTAAAAATTAGTTTTTGTTGATATGAAATCTACCTTTAAAATGTGAAATTAATAATATTGAATTAACCGAGTGATTAAAATGTATTTCCAAAACGTTAGTCGATAGTAAACACCATCACTAAGGGCCCACTCTCCCAACTCTTTGAATTAAAATAACGAAAATAAAGATAATGAGATCTACTTGAATCAAGGGGTGATTTTGGTGATGAATGGTTGAGATTTAATCAATAATAATTTTTTTTGGGGAATATTATGTATATGTAGTGGATCTTCTGGGTGGGACCTTTTGTTGGAGCTACTTTGGCTGCTATTTACCACCAAATCATCATCAGAGCCATTCCATTCAAGGCCAGAGCTTGAAGGTCAGAAGAACAGCTTCATAATTCATAATATCATTATTATCATTTCCTAAGAGATTATCTTTGGAATATATCATCTTCTTTTTTTCATTTCTTTCTTAATATGCGTGTGTTCTCTTCTTTATCTCTTTTTTGGTATCTGTAAACGTTGTTTATTTTGGTGTTTCTTGAGAGAGACTGAGATGGGTTTGTGTGTAAATTAAGTTATCTATGTCTTAATTATTAGTGGATGTTGTAATTTTCAAGTTATGTAATGGATTATATATTAATTCTTTTGTGCAATCATCAATTTGTCTTTACAACTTTCATTTTTGAATCTCACATGGCTCATTCCTATATATCTTTGACATGCATCTTTTTCAATGTTCATAGTATAATAAAAGTTGCCAATGTGTTGACATACTATAGTTTGATTTCTAATGTTTTCTATGTAACCAATCTTCATTTATCTGATTATCGTCTAGTTTGATCTAAACATTTTTTGAGTAAATAGACCCTGAGCTTCGATTTAGGTTCTCAGCCACAATGGAAAAATAAAATAGAGATGCAAGAACAATTAATTTTTTTTGGAAACATTCTTCTAATTAAAGTACAATTCACATGAGGATTGCAATCGCAAATGTTTAATTAGGAGTTTCTTTCTAGTCAATCATTTTCCTTCTTGTTGAGGTACATCTGATTTGTCCAATGAATCTATTGTTTCCAAATCCCATGATCTTCACTAGACTCTTTAGGCTTGAAATTGAATCCAATATTAATAAATGAAAGAATTGGGAATCTCAAGTAGTTGGCCAAACCGTACATGCATACTGCATACACTATCTTTCTGCAACATATATACTCC ATTAAATGTCAATTACACTAATAAAACACATAATTAAAAAATAGACATGAAAATAAGTCTCTCTATTTCGTTGTATTAAATCTTATATTAAAAAAGACACATAGCTTAAATTTAAACCAAAAAGTAAAAGAAGAGAATAGAACACTAATTTTCAGTCTATAAAAACACTCCACCTGCTAACCTTCTCCTTCTACCTTCTTCCTAAAAGCTAAAGGAAAACAAAACCCCATTAACAGGAGAGAGAAATCTCATTCTAGAGTGAGAGAAGAGAACCTCCCTTGTTACATTTTCTAAGCAAAACTCAGCAAAGAAGAAGAATAAGAAAATGGAGGGGAAAGAAGAGGACGTGAAGCTAGGAGCAAACAAGTTCTCAGAAAGGCAGCCAATTGGCACATCGGCGCAGACGGACAAGGACTACAAAGAGCCACCGCCGGCGCCACTGTACGAGCCGGGCGAGCTGAAGTCATGGTCGTTTTACAGAGCCGGAATCGCGGAGTTTATGGCCACTTTCTTGTTCCTCTACATCACCATCTTGACGGTGATGGGAGTCAACCGATCTCCGTCCAAATGCAACAGCGTCGGCATTCAGGGCATTGCTTGGGCCTTCGGCGGCATGATCTTCGCCCTCGTCTACTGCACCGCCGGCATCTCCGGTGGGCACATTAATCCGGCAGTGACCTTCGGGCTTTTCCTGGCCAGAAAACTGTCCCTCACAAGAGCAGTATTCTACATCATAATGCAATGCCTCGGCGCCATCTGCGGCGCCGGCGTCGTCAAGGGCTTCGAGGGGTCCTCCTACGTGCAGAAGCTCGGTGGTGCCAACTTCGTGTCCTCTGGCTACACCAAGGGTAGCGGTCTTGGTGCTGAGATCATCGGTACCTTCGTTCTCGTCTACACCGTCTTCTCCGCCACCGATGCTAAGAGAAATGCCAGAGATTCTCACGTCCCTATTTTGGCTCCTCTTCCCATTGGGTTTGCAGTGTTTTTGGTCCATTTGGCCACCATTCCCATCACCGGAACCGGCATTAATCCGGCCAGGAGTCTCGGAGCTGCCATCATCTACAACAGGCAACACGCTTGGGATGACCATTGGATCTTCTGGGTGGGACCTTTTGTTGGAGCTACTTTGGCTGCTATTTACCACCAAATCATCATCAGAGCCATTCCATTCAAGGCCAGAGCTTGAAGGTCAGAAGAACAGCTTCATAATTCATAATATCATTATTATCATTTCCTAAGAGATTATCTTTGGAATATATCATCTTCTTTTTTTCATTTCTTTCTTAATATGCGTGTGTTCTCTTCTTTATCTCTTTTTTGGTATCTGTAAACGTTGTTTATTTTGGTGTTTCTTGAGAGAGACTGAGATGGGTTTGTGTGTAAATTAAGTTATCTATGTCTTAATTATTAGTGGATGTTGTAATTTTCAAGTTATGTAATGGATTATATATTAATTCTTTTGTGCAATCATCAATTTGTCTTTACAACTTTCATTTTTGAATCTCACATGGCTCATTCCTATATATCTTTGACATGCATCTTTTTCAATGTTCATAGTATAATAAAAGTTGCCAATGTGTTGACATACTATAGTTTGATTTCTAATGTTTTCTATGTAACCAATCTTCATTTATCTGATTATCGTCTAGTTTGATCTAAACATTTTTTGAGTAAATAGACCCTGAGCTTCGATTTAGGTTCTCAGCCACAATGGAAAAATAAAATAGAGATGCAAGAACAATTAATTTTTTTTGGAAACATTCTTCTAATTAAAGTACAATTCACATGAGGATTGCAATCGCAAATGTTTAATTAGGAGTTTCTTTCTAGTCAATCATTTTCCTTCTTGTTGAGGTACATCTGATTTGTCCAATGAATCTATTGTTTCCAAATCCCATGATCTTCACTAGACTCTTTAGGCTTGAAATTGAATCCAATATTAATAAATGAAAGAATTGGGAATCTCAAGTAGTTGGCCAAACCGTACATGCATACTGCATACACTATCTTTCTGCAACATATATACTCC ATGGAGGGGAAAGAAGAGGACGTGAAGCTAGGAGCAAACAAGTTCTCAGAAAGGCAGCCAATTGGCACATCGGCGCAGACGGACAAGGACTACAAAGAGCCACCGCCGGCGCCACTGTACGAGCCGGGCGAGCTGAAGTCATGGTCGTTTTACAGAGCCGGAATCGCGGAGTTTATGGCCACTTTCTTGTTCCTCTACATCACCATCTTGACGGTGATGGGAGTCAACCGATCTCCGTCCAAATGCAACAGCGTCGGCATTCAGGGCATTGCTTGGGCCTTCGGCGGCATGATCTTCGCCCTCGTCTACTGCACCGCCGGCATCTCCGGTGGGCACATTAATCCGGCAGTGACCTTCGGGCTTTTCCTGGCCAGAAAACTGTCCCTCACAAGAGCAGTATTCTACATCATAATGCAATGCCTCGGCGCCATCTGCGGCGCCGGCGTCGTCAAGGGCTTCGAGGGGTCCTCCTACGTGCAGAAGCTCGGTGGTGCCAACTTCGTGTCCTCTGGCTACACCAAGGGTAGCGGTCTTGGTGCTGAGATCATCGGTACCTTCGTTCTCGTCTACACCGTCTTCTCCGCCACCGATGCTAAGAGAAATGCCAGAGATTCTCACGTCCCTATTTTGGCTCCTCTTCCCATTGGGTTTGCAGTGTTTTTGGTCCATTTGGCCACCATTCCCATCACCGGAACCGGCATTAATCCGGCCAGGAGTCTCGGAGCTGCCATCATCTACAACAGGCAACACGCTTGGGATGACCATTGGATCTTCTGGGTGGGACCTTTTGTTGGAGCTACTTTGGCTGCTATTTACCACCAAATCATCATCAGAGCCATTCCATTCAAGGCCAGAGCTTGA MEGKEEDVKLGANKFSERQPIGTSAQTDKDYKEPPPAPLYEPGELKSWSFYRAGIAEFMATFLFLYITILTVMGVNRSPSKCNSVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYIIMQCLGAICGAGVVKGFEGSSYVQKLGGANFVSSGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRQHAWDDHWIFWVGPFVGATLAAIYHQIIIRAIPFKARA
BLAST of CsGy5G002580 vs. NCBI nr
Match: KGN50087.1 (Aquaporin 1 [Cucumis sativus]) HSP 1 Score: 573.9 bits (1478), Expect = 3.0e-160 Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 0
BLAST of CsGy5G002580 vs. NCBI nr
Match: NP_001292685.1 (aquaporin PIP1-3 [Cucumis sativus] >AHB33476.1 plasma intrinsic protein 1-3 [Cucumis sativus]) HSP 1 Score: 569.7 bits (1467), Expect = 5.6e-159 Identity = 284/286 (99.30%), Postives = 284/286 (99.30%), Query Frame = 0
BLAST of CsGy5G002580 vs. NCBI nr
Match: XP_008437293.1 (PREDICTED: aquaporin PIP1-2 [Cucumis melo]) HSP 1 Score: 562.4 bits (1448), Expect = 8.9e-157 Identity = 277/286 (96.85%), Postives = 284/286 (99.30%), Query Frame = 0
BLAST of CsGy5G002580 vs. NCBI nr
Match: XP_022957952.1 (aquaporin PIP1-3 [Cucurbita moschata] >XP_022995493.1 aquaporin PIP1-3 [Cucurbita maxima] >XP_023534336.1 aquaporin PIP1-3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 551.2 bits (1419), Expect = 2.1e-153 Identity = 271/286 (94.76%), Postives = 282/286 (98.60%), Query Frame = 0
BLAST of CsGy5G002580 vs. NCBI nr
Match: XP_022929031.1 (aquaporin PIP1-3-like [Cucurbita moschata] >XP_022970079.1 aquaporin PIP1-3-like [Cucurbita maxima] >XP_023550107.1 aquaporin PIP1-3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 548.9 bits (1413), Expect = 1.0e-152 Identity = 270/286 (94.41%), Postives = 281/286 (98.25%), Query Frame = 0
BLAST of CsGy5G002580 vs. TAIR10
Match: AT1G01620.1 (plasma membrane intrinsic protein 1C) HSP 1 Score: 516.9 bits (1330), Expect = 7.8e-147 Identity = 251/286 (87.76%), Postives = 270/286 (94.41%), Query Frame = 0
BLAST of CsGy5G002580 vs. TAIR10
Match: AT4G00430.1 (plasma membrane intrinsic protein 1;4) HSP 1 Score: 511.5 bits (1316), Expect = 3.3e-145 Identity = 251/287 (87.46%), Postives = 271/287 (94.43%), Query Frame = 0
BLAST of CsGy5G002580 vs. TAIR10
Match: AT3G61430.1 (plasma membrane intrinsic protein 1A) HSP 1 Score: 510.4 bits (1313), Expect = 7.3e-145 Identity = 246/286 (86.01%), Postives = 268/286 (93.71%), Query Frame = 0
BLAST of CsGy5G002580 vs. TAIR10
Match: AT4G23400.1 (plasma membrane intrinsic protein 1;5) HSP 1 Score: 508.8 bits (1309), Expect = 2.1e-144 Identity = 247/286 (86.36%), Postives = 268/286 (93.71%), Query Frame = 0
BLAST of CsGy5G002580 vs. TAIR10
Match: AT2G45960.3 (plasma membrane intrinsic protein 1B) HSP 1 Score: 456.1 bits (1172), Expect = 1.6e-128 Identity = 224/255 (87.84%), Postives = 240/255 (94.12%), Query Frame = 0
BLAST of CsGy5G002580 vs. Swiss-Prot
Match: sp|Q08733|PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana OX=3702 GN=PIP1-3 PE=1 SV=1) HSP 1 Score: 516.9 bits (1330), Expect = 1.4e-145 Identity = 251/286 (87.76%), Postives = 270/286 (94.41%), Query Frame = 0
BLAST of CsGy5G002580 vs. Swiss-Prot
Match: sp|Q7XSQ9|PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica OX=39947 GN=PIP1-2 PE=2 SV=3) HSP 1 Score: 515.0 bits (1325), Expect = 5.3e-145 Identity = 252/288 (87.50%), Postives = 270/288 (93.75%), Query Frame = 0
BLAST of CsGy5G002580 vs. Swiss-Prot
Match: sp|Q9XF59|PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays OX=4577 GN=PIP1-2 PE=1 SV=1) HSP 1 Score: 513.8 bits (1322), Expect = 1.2e-144 Identity = 252/289 (87.20%), Postives = 272/289 (94.12%), Query Frame = 0
BLAST of CsGy5G002580 vs. Swiss-Prot
Match: sp|Q6EU94|PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=PIP1-1 PE=2 SV=1) HSP 1 Score: 513.5 bits (1321), Expect = 1.6e-144 Identity = 251/289 (86.85%), Postives = 273/289 (94.46%), Query Frame = 0
BLAST of CsGy5G002580 vs. Swiss-Prot
Match: sp|Q9AQU5|PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays OX=4577 GN=PIP1-3 PE=2 SV=1) HSP 1 Score: 513.1 bits (1320), Expect = 2.0e-144 Identity = 252/292 (86.30%), Postives = 271/292 (92.81%), Query Frame = 0
BLAST of CsGy5G002580 vs. TrEMBL
Match: tr|A0A0A0KNW3|A0A0A0KNW3_CUCSA (Aquaporin 1 OS=Cucumis sativus OX=3659 GN=Csa_5G153020 PE=3 SV=1) HSP 1 Score: 573.9 bits (1478), Expect = 2.0e-160 Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 0
BLAST of CsGy5G002580 vs. TrEMBL
Match: tr|V5RF54|V5RF54_CUCSA (Plasma intrinsic protein 1-3 OS=Cucumis sativus OX=3659 GN=PIP1-3 PE=2 SV=1) HSP 1 Score: 569.7 bits (1467), Expect = 3.7e-159 Identity = 284/286 (99.30%), Postives = 284/286 (99.30%), Query Frame = 0
BLAST of CsGy5G002580 vs. TrEMBL
Match: tr|A0A1S3ATT3|A0A1S3ATT3_CUCME (aquaporin PIP1-2 OS=Cucumis melo OX=3656 GN=LOC103482758 PE=3 SV=1) HSP 1 Score: 562.4 bits (1448), Expect = 5.9e-157 Identity = 277/286 (96.85%), Postives = 284/286 (99.30%), Query Frame = 0
BLAST of CsGy5G002580 vs. TrEMBL
Match: tr|A0A2N9GUC7|A0A2N9GUC7_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30852 PE=3 SV=1) HSP 1 Score: 528.9 bits (1361), Expect = 7.2e-147 Identity = 260/286 (90.91%), Postives = 271/286 (94.76%), Query Frame = 0
BLAST of CsGy5G002580 vs. TrEMBL
Match: tr|L7YEA8|L7YEA8_CAMSI (Aquaporin protein 7 OS=Camellia sinensis OX=4442 PE=2 SV=1) HSP 1 Score: 528.5 bits (1360), Expect = 9.5e-147 Identity = 257/286 (89.86%), Postives = 273/286 (95.45%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |