CsGy5G001600 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy5G001600
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Zinc finger matrin-type protein 1, putative isoform 1
Location	Chr5 : 989419 .. 991824 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATAGAAAAGAAGAAAAGAAGAAAAGCCAACTACAACAATGGCGAAAAAGGAAATTGGCACACATGCCAAGAACAGTTCTAATGGTGTTCTTCCTTCTCAAGTGATGAATTTTTGTTAAAGAAACTCTCTAAATCTCTCCTTTTTCCCTTTCTCTCATCACTGATTCATATCAATTTGAACGCCAATGATCACTCTGGCTTCTACTTATTATTCATTATCTTCCTTCAAGAATCTTCGTCTCTTCAAACCCTCTTCCACATTCTCCCCATCACTCTCCAATCTCAAACCCTTAAATCCTTTCCTCAAACCATCTTCCAATCAGGTAAAATTTTGCTCAATACCCTTTATTCCTCTCTTTCTGATAACTTTGATTCCTCTTCCAAGTGAAAGAAGTTACCCCACTTTGATCGCAGACCAGGTTCGGTAATGGGATTTGTAGGGCGGAATTAGGTAACGATGCACCTTTCGCCATTGCGATCGGTGCCTGTATTCTCACTTCTCTTGTTGTTCCGGCAGCTGATGGTGCTTCCGATGATGAGAGCGATGCCGTCATTGATTCCACCGATACTAGGCTTGCTGTCATGGGCATCATTAGCTTTATTCCTTACTTCAATTGGCTGGTATGTATGTTTCTGATTTTTTTTTTTCTGTGGTTCAATTTGTTTTTGCTTTGTACAGATTTTATTTTATCTTCTTCTTTTATTATTTCAATAGAGTTGGGTTTTCGCGTGGCTTGATTCTGGAAGAAGACATTATGCTGTGTATGCAATCGTGTATCTGGCTCCTTACTTAAGGTCATTTTCTATTCTTGGATTCTTCTTGTTTTTGTTCCATTGAATTGTGTAATTGTGAATTATTTTCTAGCTGTGTCGTTGAACTAGTTGTTTACATTTCTAGAACTCAAAGTAGAGGAAGAACGAGTAATCAGCTATGGGAATAGGAGAATACAGATTATAGAAGTTTTATGTGATTTTTTAAGAAGTTACAAGATGAGGTTCAGTAGTGTGCCTTATCAAAATTAAATGGACAAGAGGTTATGAACAACATTTCATTTCTTATTAATGGGGCTTTTCTCTAAGAATTTGTTTTATGTCAATGGGAGCATAGCTGGTTCGATTCATTAGGCATTGATTACCATCCCAAACGTGGATAGTTTAGTCCTCACTTTGCAATCGTTGAACTTGAAGAACGTTTGTTTATGAAGTTCTTGGGGTGGGTGGTACTGTGGTTGCTAGGTTGGTTCAACTCTTAGTTGTGTCAATATGTTTGAGCCAAAGTCTTAGATTATTATGTGTGTTTGAGACTTTAGCCATGGCTAACAATGAACATAAAGCGGATTTTGTTCATGTGTATGTAGTATGCACAAACATCAGTATATTCTTCTTACCATGATTATGCATTGCGCTATTAGGTCAAACTTATCGTTGTCGCCCGAAGAGAGTTGGCTTCCTATCATTAGTATACTTCTCTGCATTATTCACATTCAGGTATCTCGAGAAGTTTCCTCCTTATACTTTGTTCTATTCACCAGAGGTTTTACAAGAAATCTCATTTTTGTACGCCAACCTATTCTCTAATAATGAAATAGTGTGGCAGTATAATTTGTGTTTTTTGTGATCACAACTTGGCGTTTACTTGTAGCTTGAAGCGAGCATTACAAATGGAGATATTCAACCTTTGCAAATATTTGGGAAAGCTTCAAAGAAAATTTCTTCAACCAAGAAAGGGAGAGACCAATTCAAGGGTTCCCAAGGATCATACAAAGAGGTAAACTATGTGTTACATAGACAAAGGCAATCTCTATATGCTTGTGCATAATTCATCGTCCAATCTTATAATCTGTAATCTGAGTTATTTTACTCTATATTCAAGAGCGAAAAGAAAGGGGACAGGAAGCTGCCGTCAGCAGAAGAAAGATTTCGAGATAAGATCAGCAGGTTGGGAGATGCTAAAGAGACATTAGATCATGAACAATCAAATGGAGAATGGGATGATGATCAAAGGAGAAAGCATTAGGTTATATGTTCTAACTTTACTCTGCTTGTGGTATACTAAAATTGGAGGATACAGAAACTGATAGTATCAAAGTTGTAGCATTAACATTACTTTTCCCTTCAAATCTAGAGTCAGTTGCTGCCATTTTCATGGACCTCAAGTATTCTTAGAACTGCTGCAGTTGTATTGCTAAGCTGAGGTTGCTGAATGCTGTTATTTTACTTCTCTTTTATCAGAAACATAAGTTTATTATTGAAATGAGAGAAACGTTATGCATAGGTCTTAACTTACCCACAAGCAGGACTAGTGTTGTGCATCAACCTTTAAATTTACACTCTCCATCAATTATTGTTTGTCTGTTGGTGGGCTTTTTCATTTAATTTATCAATGAAATGTCACTGTTTAGGATA

mRNA sequence

GATAGAAAAGAAGAAAAGAAGAAAAGCCAACTACAACAATGGCGAAAAAGGAAATTGGCACACATGCCAAGAACAGTTCTAATGGTGTTCTTCCTTCTCAAGTGATGAATTTTTGTTAAAGAAACTCTCTAAATCTCTCCTTTTTCCCTTTCTCTCATCACTGATTCATATCAATTTGAACGCCAATGATCACTCTGGCTTCTACTTATTATTCATTATCTTCCTTCAAGAATCTTCGTCTCTTCAAACCCTCTTCCACATTCTCCCCATCACTCTCCAATCTCAAACCCTTAAATCCTTTCCTCAAACCATCTTCCAATCAGACCAGGTTCGGTAATGGGATTTGTAGGGCGGAATTAGGTAACGATGCACCTTTCGCCATTGCGATCGGTGCCTGTATTCTCACTTCTCTTGTTGTTCCGGCAGCTGATGGTGCTTCCGATGATGAGAGCGATGCCGTCATTGATTCCACCGATACTAGGCTTGCTGTCATGGGCATCATTAGCTTTATTCCTTACTTCAATTGGCTGAGTTGGGTTTTCGCGTGGCTTGATTCTGGAAGAAGACATTATGCTGTGTATGCAATCGTGTATCTGGCTCCTTACTTAAGGTCAAACTTATCGTTGTCGCCCGAAGAGAGTTGGCTTCCTATCATTAGTATACTTCTCTGCATTATTCACATTCAGCTTGAAGCGAGCATTACAAATGGAGATATTCAACCTTTGCAAATATTTGGGAAAGCTTCAAAGAAAATTTCTTCAACCAAGAAAGGGAGAGACCAATTCAAGGGTTCCCAAGGATCATACAAAGAGAGCGAAAAGAAAGGGGACAGGAAGCTGCCGTCAGCAGAAGAAAGATTTCGAGATAAGATCAGCAGGTTGGGAGATGCTAAAGAGACATTAGATCATGAACAATCAAATGGAGAATGGGATGATGATCAAAGGAGAAAGCATTAGGTTATATGTTCTAACTTTACTCTGCTTGTGGTATACTAAAATTGGAGGATACAGAAACTGATAGTATCAAAGTTGTAGCATTAACATTACTTTTCCCTTCAAATCTAGAGTCAGTTGCTGCCATTTTCATGGACCTCAAGTATTCTTAGAACTGCTGCAGTTGTATTGCTAAGCTGAGGTTGCTGAATGCTGTTATTTTACTTCTCTTTTATCAGAAACATAAGTTTATTATTGAAATGAGAGAAACGTTATGCATAGGTCTTAACTTACCCACAAGCAGGACTAGTGTTGTGCATCAACCTTTAAATTTACACTCTCCATCAATTATTGTTTGTCTGTTGGTGGGCTTTTTCATTTAATTTATCAATGAAATGTCACTGTTTAGGATA

Coding sequence (CDS)

ATGATCACTCTGGCTTCTACTTATTATTCATTATCTTCCTTCAAGAATCTTCGTCTCTTCAAACCCTCTTCCACATTCTCCCCATCACTCTCCAATCTCAAACCCTTAAATCCTTTCCTCAAACCATCTTCCAATCAGACCAGGTTCGGTAATGGGATTTGTAGGGCGGAATTAGGTAACGATGCACCTTTCGCCATTGCGATCGGTGCCTGTATTCTCACTTCTCTTGTTGTTCCGGCAGCTGATGGTGCTTCCGATGATGAGAGCGATGCCGTCATTGATTCCACCGATACTAGGCTTGCTGTCATGGGCATCATTAGCTTTATTCCTTACTTCAATTGGCTGAGTTGGGTTTTCGCGTGGCTTGATTCTGGAAGAAGACATTATGCTGTGTATGCAATCGTGTATCTGGCTCCTTACTTAAGGTCAAACTTATCGTTGTCGCCCGAAGAGAGTTGGCTTCCTATCATTAGTATACTTCTCTGCATTATTCACATTCAGCTTGAAGCGAGCATTACAAATGGAGATATTCAACCTTTGCAAATATTTGGGAAAGCTTCAAAGAAAATTTCTTCAACCAAGAAAGGGAGAGACCAATTCAAGGGTTCCCAAGGATCATACAAAGAGAGCGAAAAGAAAGGGGACAGGAAGCTGCCGTCAGCAGAAGAAAGATTTCGAGATAAGATCAGCAGGTTGGGAGATGCTAAAGAGACATTAGATCATGAACAATCAAATGGAGAATGGGATGATGATCAAAGGAGAAAGCATTAG

Protein sequence

MITLASTYYSLSSFKNLRLFKPSSTFSPSLSNLKPLNPFLKPSSNQTRFGNGICRAELGNDAPFAIAIGACILTSLVVPAADGASDDESDAVIDSTDTRLAVMGIISFIPYFNWLSWVFAWLDSGRRHYAVYAIVYLAPYLRSNLSLSPEESWLPIISILLCIIHIQLEASITNGDIQPLQIFGKASKKISSTKKGRDQFKGSQGSYKESEKKGDRKLPSAEERFRDKISRLGDAKETLDHEQSNGEWDDDQRRKH

Homology

[Close]

BLAST of CsGy5G001600 vs. NCBI nr
Match: XP_004143845.1 (PREDICTED: uncharacterized protein LOC101203490 [Cucumis sativus] >KGN49988.1 hypothetical protein Csa_5G148590 [Cucumis sativus])

HSP 1 Score: 495.4 bits (1274), Expect = 1.2e-136
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0


Query: 1   MITLASTYYSLSSFKNLRLFKPSSTFSPSLSNLKPLNPFLKPSSNQTRFGNGICRAELGN 60
           MITLASTYYSLSSFKNLRLFKPSSTFSPSLSNLKPLNPFLKPSSNQTRFGNGICRAELGN
Sbjct: 1   MITLASTYYSLSSFKNLRLFKPSSTFSPSLSNLKPLNPFLKPSSNQTRFGNGICRAELGN 60

Query: 61  DAPFAIAIGACILTSLVVPAADGASDDESDAVIDSTDTRLAVMGIISFIPYFNWLSWVFA 120
           DAPFAIAIGACILTSLVVPAADGASDDESDAVIDSTDTRLAVMGIISFIPYFNWLSWVFA
Sbjct: 61  DAPFAIAIGACILTSLVVPAADGASDDESDAVIDSTDTRLAVMGIISFIPYFNWLSWVFA 120

Query: 121 WLDSGRRHYAVYAIVYLAPYLRSNLSLSPEESWLPIISILLCIIHIQLEASITNGDIQPL 180
           WLDSGRRHYAVYAIVYLAPYLRSNLSLSPEESWLPIISILLCIIHIQLEASITNGDIQPL
Sbjct: 121 WLDSGRRHYAVYAIVYLAPYLRSNLSLSPEESWLPIISILLCIIHIQLEASITNGDIQPL 180

Query: 181 QIFGKASKKISSTKKGRDQFKGSQGSYKESEKKGDRKLPSAEERFRDKISRLGDAKETLD 240
           QIFGKASKKISSTKKGRDQFKGSQGSYKESEKKGDRKLPSAEERFRDKISRLGDAKETLD
Sbjct: 181 QIFGKASKKISSTKKGRDQFKGSQGSYKESEKKGDRKLPSAEERFRDKISRLGDAKETLD 240

Query: 241 HEQSNGEWDDDQRRKH 257
           HEQSNGEWDDDQRRKH
Sbjct: 241 HEQSNGEWDDDQRRKH 256

[Close]

BLAST of CsGy5G001600 vs. NCBI nr
Match: XP_008437440.1 (PREDICTED: uncharacterized protein LOC103482855 isoform X1 [Cucumis melo])

HSP 1 Score: 459.9 bits (1182), Expect = 5.6e-126
Identity = 242/256 (94.53%), Postives = 247/256 (96.48%), Query Frame = 0


Query: 1   MITLASTYYSLSSFKNLRLFKPSSTFSPSLSNLKPLNPFLKPSSNQTRFGNGICRAELGN 60
           MITLAST+YS SSFK+LRLFKPSSTFSPSLSNLKPLNPFLKP SNQTRFGNGICRAELGN
Sbjct: 1   MITLASTHYSSSSFKDLRLFKPSSTFSPSLSNLKPLNPFLKPPSNQTRFGNGICRAELGN 60

Query: 61  DAPFAIAIGACILTSLVVPAADGASDDESDAVIDSTDTRLAVMGIISFIPYFNWLSWVFA 120
           DAPFAIAIGAC LTSLVVPAAD ASDDESDAVIDSTDTRLAVMGIISFIPYFNWLSWVFA
Sbjct: 61  DAPFAIAIGACFLTSLVVPAADRASDDESDAVIDSTDTRLAVMGIISFIPYFNWLSWVFA 120

Query: 121 WLDSGRRHYAVYAIVYLAPYLRSNLSLSPEESWLPIISILLCIIHIQLEASITNGDIQPL 180
           WLDSGRR YAVYAIVYLAPYLRSNLSLSPEESWLPI+SILLCIIHIQLEASITNGDIQPL
Sbjct: 121 WLDSGRRLYAVYAIVYLAPYLRSNLSLSPEESWLPIVSILLCIIHIQLEASITNGDIQPL 180

Query: 181 QIFGKASKKISSTKKGRDQFKGSQGSYKESEKKGDRKLPSAEERFRDKISRLGDAKETLD 240
           QIFGKASK+ISSTKKGRDQFKGSQGSYKESEKK DRKLPSAEERFRDKISRLGD+KET D
Sbjct: 181 QIFGKASKQISSTKKGRDQFKGSQGSYKESEKKEDRKLPSAEERFRDKISRLGDSKET-D 240

Query: 241 HEQSNGEWDDDQRRKH 257
           HEQ N EWDDDQRRKH
Sbjct: 241 HEQINEEWDDDQRRKH 255

[Close]

BLAST of CsGy5G001600 vs. NCBI nr
Match: XP_008437441.1 (PREDICTED: uncharacterized protein LOC103482855 isoform X2 [Cucumis melo])

HSP 1 Score: 384.8 bits (987), Expect = 2.3e-103
Identity = 208/250 (83.20%), Postives = 218/250 (87.20%), Query Frame = 0


Query: 1   MITLASTYYSLSSFKNLRLFKPSSTFSPSLSNLKPLNPFLKPSSNQTRFGNGICRAELGN 60
           MITLAST+YS SSFK+LRLFKPSSTFSPSLSNLKPLNPFLKP SNQTRFGNGICRAELGN
Sbjct: 1   MITLASTHYSSSSFKDLRLFKPSSTFSPSLSNLKPLNPFLKPPSNQTRFGNGICRAELGN 60

Query: 61  DAPFAIAIGACILTSLVVPAADGASDDESDAVIDSTDTRLAVMGIISFIPYFNWLSWVFA 120
           DAPFAIAIGAC LTSLVVPAAD ASDDESDAVIDSTDTRLAVMGIISFIPYFNWLSWVFA
Sbjct: 61  DAPFAIAIGACFLTSLVVPAADRASDDESDAVIDSTDTRLAVMGIISFIPYFNWLSWVFA 120

Query: 121 WLDSGRRHYAVYAIVYLAPYLRSNLSLSPEESWLPIISILLCIIHIQLEASITNGDIQPL 180
           WLDSGRR YAVYAIVYLAPYLRSNLSLSPEESWLPI+SILLCIIHIQLEASITNGDIQPL
Sbjct: 121 WLDSGRRLYAVYAIVYLAPYLRSNLSLSPEESWLPIVSILLCIIHIQLEASITNGDIQPL 180

Query: 181 QIFGKASKKISSTKKGRDQFKGSQGSYKESEKKGDRKLPSAEERFRDKISRLGDAKETL- 240
           QIFGKASK+ISSTKKGRDQFKGSQGSYKE        +     R R K  R G  ++   
Sbjct: 181 QIFGKASKQISSTKKGRDQFKGSQGSYKE--------VNHVLHRQRAKRKRTGSCRQQKN 240

Query: 241 DHEQSNGEWD 250
           D E  + +W+
Sbjct: 241 DFEIRSVDWE 242

[Close]

BLAST of CsGy5G001600 vs. NCBI nr
Match: XP_022131237.1 (uncharacterized protein LOC111004499 [Momordica charantia])

HSP 1 Score: 370.9 bits (951), Expect = 3.4e-99
Identity = 196/254 (77.17%), Postives = 216/254 (85.04%), Query Frame = 0


Query: 3   TLASTYYSLSSFKNLRLFKPSSTFSPSLSNLKPLNPFLKPSSNQTRFGNGICRAELGNDA 62
           +L+S+  +LSS K LRL +P STFS SLSNLK LNP  K +S+Q R GNG+CRA+LGND 
Sbjct: 8   SLSSSPSNLSSLK-LRLPRPPSTFSTSLSNLKSLNPCDKAASDQKRIGNGVCRADLGNDG 67

Query: 63  PFAIAIGACILTSLVVPAADGASDDESDAVIDSTDTRLAVMGIISFIPYFNWLSWVFAWL 122
           PFA+AIGACIL+S V P A G SDDESDAVIDSTDTR AVMGIISFIPYFNWLSWVFAWL
Sbjct: 68  PFAVAIGACILSSFVFPVAGGGSDDESDAVIDSTDTRFAVMGIISFIPYFNWLSWVFAWL 127

Query: 123 DSGRRHYAVYAIVYLAPYLRSNLSLSPEESWLPIISILLCIIHIQLEASITNGDIQPLQI 182
           DSGRR YAVYA+VYL PYLRSNLSLSPEESWLPI SILLCIIHIQLE SI NGDIQP QI
Sbjct: 128 DSGRRLYAVYALVYLVPYLRSNLSLSPEESWLPIASILLCIIHIQLEVSIRNGDIQPFQI 187

Query: 183 FGKASKKISSTKKGRDQFKGSQGSYKESEKKGDRKLPSAEERFRDKISRLGDAKETLDHE 242
           FGK SKKISST +GRD FKGSQG  +ES +K D KLPS +E+ RD+I R GD+KETLDHE
Sbjct: 188 FGKTSKKISSTTRGRDHFKGSQGPPEESGEKEDMKLPSIQEQLRDEIRRWGDSKETLDHE 247

Query: 243 QSNGEWDDDQRRKH 257
           QSNGEWDD+QRRKH
Sbjct: 248 QSNGEWDDEQRRKH 260

[Close]

BLAST of CsGy5G001600 vs. NCBI nr
Match: XP_023534483.1 (uncharacterized protein LOC111796027 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 350.5 bits (898), Expect = 4.8e-93
Identity = 193/260 (74.23%), Postives = 206/260 (79.23%), Query Frame = 0


Query: 1   MITLASTYYS-----LSSFKNLRLFKPSSTFSPSLSNLKPLNPFLKPSSNQTRFGNGICR 60
           MITLAS Y S      SS   LRL KP  TFS SLSNLKPLNP  K +SNQ    NGICR
Sbjct: 1   MITLASAYLSSSPSNFSSLNLLRLTKPPFTFSTSLSNLKPLNPSHKSASNQRTTRNGICR 60

Query: 61  AELGNDAPFAIAIGACILTSLVVPAADGASDDESDAVIDSTDTRLAVMGIISFIPYFNWL 120
           AELGNDAPFAIAIGACILTSLV+P          DAV+DSTD RLAVMGIISFIPYFNWL
Sbjct: 61  AELGNDAPFAIAIGACILTSLVLPXXXXXXXXXXDAVMDSTDARLAVMGIISFIPYFNWL 120

Query: 121 SWVFAWLDSGRRHYAVYAIVYLAPYLRSNLSLSPEESWLPIISILLCIIHIQLEASITNG 180
           SWVFAWLDSG+R YAVYAIVYLAPYLRSNLSLSP+ESWLPI+SIL+CI HIQ+EASI NG
Sbjct: 121 SWVFAWLDSGKRRYAVYAIVYLAPYLRSNLSLSPDESWLPIVSILICIAHIQVEASIKNG 180

Query: 181 DIQPLQIFGKASKKISSTKKGRDQFKGSQGSYKESEKKGDRKLPSAEERFRDKISRLGDA 240
           DIQP QIFGKAS +IS TK GR   KGSQG  K+S KK D KLPSAEE+ RD+I   GD 
Sbjct: 181 DIQPFQIFGKASNQISRTKIGRGHLKGSQGPTKKSGKKRDMKLPSAEEQLRDEIRGWGDY 240

Query: 241 KETLDHEQSNGEWDDDQRRK 256
           KETLDHEQSN EWDD+QRRK
Sbjct: 241 KETLDHEQSNEEWDDEQRRK 260

[Close]

BLAST of CsGy5G001600 vs. TAIR10
Match: AT5G41960.1 (unknown protein)

HSP 1 Score: 180.6 bits (457), Expect = 1.2e-45
Identity = 99/171 (57.89%), Postives = 112/171 (65.50%), Query Frame = 0


Query: 38  PFLKPSSNQTRFGNGICRAELGNDAPFAIAIGACILTSLVVPAADGASD---DESDAVID 97
           P   P     +    ICRAE   DAP   AIGACIL+S V P A   +D         I 
Sbjct: 40  PLQNPKKLCRKIERVICRAEFSQDAPLVTAIGACILSSFVFPVAKRVNDXXXXXXXXXIV 99

Query: 98  STDTRLAVMGIISFIPYFNWLSWVFAWLDSGRRHYAVYAIVYLAPYLRSNLSLSPEESWL 157
           STD RLA MGIISFIPYFNWLSWVFAWLD+G+  YAVYA+VYL PYL SNLS+SPEESWL
Sbjct: 100 STDMRLAAMGIISFIPYFNWLSWVFAWLDTGKSRYAVYALVYLVPYLSSNLSISPEESWL 159

Query: 158 PIISILLCIIHIQLEASITNGDIQPLQIFGKASKKISSTKKG---RDQFKG 203
           PI SI+L IIH+QLEASI NGD++ L  F   S    S+KK    +  FKG
Sbjct: 160 PITSIVLGIIHVQLEASIANGDVETLAFFRNTSDDDFSSKKRIHFKKHFKG 210

[Close]

BLAST of CsGy5G001600 vs. TrEMBL
Match: tr|A0A0A0KK98|A0A0A0KK98_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G148590 PE=4 SV=1)

HSP 1 Score: 495.4 bits (1274), Expect = 7.9e-137
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0


Query: 1   MITLASTYYSLSSFKNLRLFKPSSTFSPSLSNLKPLNPFLKPSSNQTRFGNGICRAELGN 60
           MITLASTYYSLSSFKNLRLFKPSSTFSPSLSNLKPLNPFLKPSSNQTRFGNGICRAELGN
Sbjct: 1   MITLASTYYSLSSFKNLRLFKPSSTFSPSLSNLKPLNPFLKPSSNQTRFGNGICRAELGN 60

Query: 61  DAPFAIAIGACILTSLVVPAADGASDDESDAVIDSTDTRLAVMGIISFIPYFNWLSWVFA 120
           DAPFAIAIGACILTSLVVPAADGASDDESDAVIDSTDTRLAVMGIISFIPYFNWLSWVFA
Sbjct: 61  DAPFAIAIGACILTSLVVPAADGASDDESDAVIDSTDTRLAVMGIISFIPYFNWLSWVFA 120

Query: 121 WLDSGRRHYAVYAIVYLAPYLRSNLSLSPEESWLPIISILLCIIHIQLEASITNGDIQPL 180
           WLDSGRRHYAVYAIVYLAPYLRSNLSLSPEESWLPIISILLCIIHIQLEASITNGDIQPL
Sbjct: 121 WLDSGRRHYAVYAIVYLAPYLRSNLSLSPEESWLPIISILLCIIHIQLEASITNGDIQPL 180

Query: 181 QIFGKASKKISSTKKGRDQFKGSQGSYKESEKKGDRKLPSAEERFRDKISRLGDAKETLD 240
           QIFGKASKKISSTKKGRDQFKGSQGSYKESEKKGDRKLPSAEERFRDKISRLGDAKETLD
Sbjct: 181 QIFGKASKKISSTKKGRDQFKGSQGSYKESEKKGDRKLPSAEERFRDKISRLGDAKETLD 240

Query: 241 HEQSNGEWDDDQRRKH 257
           HEQSNGEWDDDQRRKH
Sbjct: 241 HEQSNGEWDDDQRRKH 256

[Close]

BLAST of CsGy5G001600 vs. TrEMBL
Match: tr|A0A1S3AU53|A0A1S3AU53_CUCME (uncharacterized protein LOC103482855 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482855 PE=4 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 3.7e-126
Identity = 242/256 (94.53%), Postives = 247/256 (96.48%), Query Frame = 0


Query: 1   MITLASTYYSLSSFKNLRLFKPSSTFSPSLSNLKPLNPFLKPSSNQTRFGNGICRAELGN 60
           MITLAST+YS SSFK+LRLFKPSSTFSPSLSNLKPLNPFLKP SNQTRFGNGICRAELGN
Sbjct: 1   MITLASTHYSSSSFKDLRLFKPSSTFSPSLSNLKPLNPFLKPPSNQTRFGNGICRAELGN 60

Query: 61  DAPFAIAIGACILTSLVVPAADGASDDESDAVIDSTDTRLAVMGIISFIPYFNWLSWVFA 120
           DAPFAIAIGAC LTSLVVPAAD ASDDESDAVIDSTDTRLAVMGIISFIPYFNWLSWVFA
Sbjct: 61  DAPFAIAIGACFLTSLVVPAADRASDDESDAVIDSTDTRLAVMGIISFIPYFNWLSWVFA 120

Query: 121 WLDSGRRHYAVYAIVYLAPYLRSNLSLSPEESWLPIISILLCIIHIQLEASITNGDIQPL 180
           WLDSGRR YAVYAIVYLAPYLRSNLSLSPEESWLPI+SILLCIIHIQLEASITNGDIQPL
Sbjct: 121 WLDSGRRLYAVYAIVYLAPYLRSNLSLSPEESWLPIVSILLCIIHIQLEASITNGDIQPL 180

Query: 181 QIFGKASKKISSTKKGRDQFKGSQGSYKESEKKGDRKLPSAEERFRDKISRLGDAKETLD 240
           QIFGKASK+ISSTKKGRDQFKGSQGSYKESEKK DRKLPSAEERFRDKISRLGD+KET D
Sbjct: 181 QIFGKASKQISSTKKGRDQFKGSQGSYKESEKKEDRKLPSAEERFRDKISRLGDSKET-D 240

Query: 241 HEQSNGEWDDDQRRKH 257
           HEQ N EWDDDQRRKH
Sbjct: 241 HEQINEEWDDDQRRKH 255

[Close]

BLAST of CsGy5G001600 vs. TrEMBL
Match: tr|A0A1S3AU10|A0A1S3AU10_CUCME (uncharacterized protein LOC103482855 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482855 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 1.5e-103
Identity = 208/250 (83.20%), Postives = 218/250 (87.20%), Query Frame = 0


Query: 1   MITLASTYYSLSSFKNLRLFKPSSTFSPSLSNLKPLNPFLKPSSNQTRFGNGICRAELGN 60
           MITLAST+YS SSFK+LRLFKPSSTFSPSLSNLKPLNPFLKP SNQTRFGNGICRAELGN
Sbjct: 1   MITLASTHYSSSSFKDLRLFKPSSTFSPSLSNLKPLNPFLKPPSNQTRFGNGICRAELGN 60

Query: 61  DAPFAIAIGACILTSLVVPAADGASDDESDAVIDSTDTRLAVMGIISFIPYFNWLSWVFA 120
           DAPFAIAIGAC LTSLVVPAAD ASDDESDAVIDSTDTRLAVMGIISFIPYFNWLSWVFA
Sbjct: 61  DAPFAIAIGACFLTSLVVPAADRASDDESDAVIDSTDTRLAVMGIISFIPYFNWLSWVFA 120

Query: 121 WLDSGRRHYAVYAIVYLAPYLRSNLSLSPEESWLPIISILLCIIHIQLEASITNGDIQPL 180
           WLDSGRR YAVYAIVYLAPYLRSNLSLSPEESWLPI+SILLCIIHIQLEASITNGDIQPL
Sbjct: 121 WLDSGRRLYAVYAIVYLAPYLRSNLSLSPEESWLPIVSILLCIIHIQLEASITNGDIQPL 180

Query: 181 QIFGKASKKISSTKKGRDQFKGSQGSYKESEKKGDRKLPSAEERFRDKISRLGDAKETL- 240
           QIFGKASK+ISSTKKGRDQFKGSQGSYKE        +     R R K  R G  ++   
Sbjct: 181 QIFGKASKQISSTKKGRDQFKGSQGSYKE--------VNHVLHRQRAKRKRTGSCRQQKN 240

Query: 241 DHEQSNGEWD 250
           D E  + +W+
Sbjct: 241 DFEIRSVDWE 242

[Close]

BLAST of CsGy5G001600 vs. TrEMBL
Match: tr|A0A2I4EYB9|A0A2I4EYB9_9ROSI (uncharacterized protein LOC108993806 isoform X2 OS=Juglans regia OX=51240 GN=LOC108993806 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 5.6e-66
Identity = 147/256 (57.42%), Postives = 182/256 (71.09%), Query Frame = 0


Query: 2   ITLASTYYSLSSFKNLR--LFKPSSTFSPSLSNLKPLNPFLKPSSNQTRFGNGICRAELG 61
           ++L  T +S S+   L+  LF P + F PSLS LKP +P  K    + R  +G CRAE  
Sbjct: 4   LSLTVTPFSSSTRSYLKPTLFPPLTPFRPSLSTLKPPSPRTK---LKKRIRHGSCRAEFS 63

Query: 62  NDAPFAIAIGACILTSLVVPAADGASDDESDAVIDSTDTRLAVMGIISFIPYFNWLSWVF 121
           +DAPFA AIGAC+L SLV P  D   D++SD+V D +DTR ++MGIISFIPYFNWLSWVF
Sbjct: 64  HDAPFAAAIGACMLNSLVFPVTDKGPDNDSDSVFDLSDTRFSIMGIISFIPYFNWLSWVF 123

Query: 122 AWLDSGRRHYAVYAIVYLAPYLRSNLSLSPEESWLPIISILLCIIHIQLEASITNGDIQP 181
           AWLDSG+R YAVYAIVYLAPYLRSNLSLSPEESWLPI SI+ CIIHIQLEASI +GDIQ 
Sbjct: 124 AWLDSGKRRYAVYAIVYLAPYLRSNLSLSPEESWLPIASIVFCIIHIQLEASIKDGDIQG 183

Query: 182 LQIFGKASKKISSTKKGRDQFKGSQGSYKESEKKGDRKLPSAEERFRDKISRLGDAKETL 241
            Q+F KA K +S+  + +D   G +G  +E  K     L SAEE+ R+ I R G  K++ 
Sbjct: 184 FQLFSKAEKHLSAMARKKDHSHGQEGISEEGRKTEKTNLLSAEEQSRNDIPRWGVPKKSS 243

Query: 242 -DHEQSNGEWDDDQRR 255
            D E+SNG+W DD+R+
Sbjct: 244 GDRERSNGDWLDDERK 256

[Close]

BLAST of CsGy5G001600 vs. TrEMBL
Match: tr|A0A2I4EYB6|A0A2I4EYB6_9ROSI (uncharacterized protein LOC108993806 isoform X1 OS=Juglans regia OX=51240 GN=LOC108993806 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.1e-65
Identity = 147/257 (57.20%), Postives = 185/257 (71.98%), Query Frame = 0


Query: 2   ITLASTYYSLSSFKNLR--LFKPSSTFSPSLSNLKPLNPFLKPSSNQTRFGNGICRAELG 61
           ++L  T +S S+   L+  LF P + F PSLS LKP +P  K    + R  +G CRAE  
Sbjct: 4   LSLTVTPFSSSTRSYLKPTLFPPLTPFRPSLSTLKPPSPRTK---LKKRIRHGSCRAEFS 63

Query: 62  NDAPFAIAIGACILTSLVVPAADGASDDESDAVIDSTDTRLAVMGIISFIPYFNWLSWVF 121
           +DAPFA AIGAC+L SLV P  D   D++SD+V D +DTR ++MGIISFIPYFNWLSWVF
Sbjct: 64  HDAPFAAAIGACMLNSLVFPVTDKGPDNDSDSVFDLSDTRFSIMGIISFIPYFNWLSWVF 123

Query: 122 AWLDSGRRHYAVYAIVYLAPYLRSNLSLSPEESWLPIISILLCIIHIQLEASITNGDIQP 181
           AWLDSG+R YAVYAIVYLAPYLRSNLSLSPEESWLPI SI+ CIIHIQLEASI +GDIQ 
Sbjct: 124 AWLDSGKRRYAVYAIVYLAPYLRSNLSLSPEESWLPIASIVFCIIHIQLEASIKDGDIQG 183

Query: 182 LQIFGKASKKISSTKKGRDQFKGSQGSYKESEKKGDR-KLPSAEERFRDKISRLGDAKET 241
            Q+F KA K +S+  + +D   G +G  +E  +K ++  L SAEE+ R+ I R G  K++
Sbjct: 184 FQLFSKAEKHLSAMARKKDHSHGQEGISEEEGRKTEKTNLLSAEEQSRNDIPRWGVPKKS 243

Query: 242 L-DHEQSNGEWDDDQRR 255
             D E+SNG+W DD+R+
Sbjct: 244 SGDRERSNGDWLDDERK 257

The following BLAST results are available for this feature:

BLAST of CsGy5G001600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143845.1	1.2e-136	100.00	PREDICTED: uncharacterized protein LOC101203490 [Cucumis sativus] >KGN49988.1 hy...	[more]
XP_008437440.1	5.6e-126	94.53	PREDICTED: uncharacterized protein LOC103482855 isoform X1 [Cucumis melo]	[more]
XP_008437441.1	2.3e-103	83.20	PREDICTED: uncharacterized protein LOC103482855 isoform X2 [Cucumis melo]	[more]
XP_022131237.1	3.4e-99	77.17	uncharacterized protein LOC111004499 [Momordica charantia]	[more]
XP_023534483.1	4.8e-93	74.23	uncharacterized protein LOC111796027 isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy5G001600 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G41960.1	1.2e-45	57.89	unknown protein	[more]

BLAST of CsGy5G001600 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy5G001600 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KK98\|A0A0A0KK98_CUCSA	7.9e-137	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G148590 PE=4 SV=1	[more]
tr\|A0A1S3AU53\|A0A1S3AU53_CUCME	3.7e-126	94.53	uncharacterized protein LOC103482855 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3AU10\|A0A1S3AU10_CUCME	1.5e-103	83.20	uncharacterized protein LOC103482855 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A2I4EYB9\|A0A2I4EYB9_9ROSI	5.6e-66	57.42	uncharacterized protein LOC108993806 isoform X2 OS=Juglans regia OX=51240 GN=LOC...	[more]
tr\|A0A2I4EYB6\|A0A2I4EYB6_9ROSI	2.1e-65	57.20	uncharacterized protein LOC108993806 isoform X1 OS=Juglans regia OX=51240 GN=LOC...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G001600.1	CsGy5G001600.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 193..256
None	No IPR available	PANTHER	PTHR36804	FAMILY NOT NAMED	coord: 12..255

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy5G001600	Cla011336	Watermelon (97103) v1	cgybwmB381
CsGy5G001600	Csa5G148590	Cucumber (Chinese Long) v2	cgybcuB224
CsGy5G001600	MELO3C005780	Melon (DHL92) v3.5.1	cgybmeB298
CsGy5G001600	ClCG01G001570	Watermelon (Charleston Gray)	cgybwcgB332
CsGy5G001600	CSPI05G04350	Wild cucumber (PI 183967)	cgybcpiB226
CsGy5G001600	CmaCh02G009380	Cucurbita maxima (Rimu)	cgybcmaB638
CsGy5G001600	CmoCh02G009480	Cucurbita moschata (Rifu)	cgybcmoB617
CsGy5G001600	Lsi09G001450	Bottle gourd (USVL1VR-Ls)	cgyblsiB294
CsGy5G001600	Cp4.1LG05g07680	Cucurbita pepo (Zucchini)	cgybcpeB685
CsGy5G001600	MELO3C005780.2	Melon (DHL92) v3.6.1	cgybmedB298
CsGy5G001600	CsaV3_5G001730	Cucumber (Chinese Long) v3	cgybcucB232
CsGy5G001600	Cla97C01G001580	Watermelon (97103) v2	cgybwmbB319
CsGy5G001600	Bhi12G000090	Wax gourd	cgybwgoB413
CsGy5G001600	Carg08536	Silver-seed gourd	carcgybB0709

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy5G001600	Cucurbita maxima (Rimu)	cgybcmaB608
CsGy5G001600	Cucurbita moschata (Rifu)	cgybcmoB583
CsGy5G001600	Cucurbita pepo (Zucchini)	cgybcpeB580
CsGy5G001600	Silver-seed gourd	carcgybB0370