CsGy5G001480 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy5G001480
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	protein BRANCHLESS TRICHOME
Location	Chr5 : 920183 .. 922718 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAAGAAGAAGAAGAAGAAGAGATCAATTAGATATGGAGGATGAGATGATTGATGATACTAATTCTCCAAGCTGGAAACTTTATGAAAACCCTTTTTATATTACCCCTTCTCATCATCATCATCACCGTCATCATCGTCATCAAACTTCTCATAAATCCTCCATTAACACCAACAACAACAACCAACTCCAATTTTATTGCTTGAAATTTTCTTCTTCTTCTTCTTCTGATCTATTTCCTACTAAAAGGCGAATGGATTCAGAGCTCGATCTCGCCCGAAGCCAGATCGTAGAGCTCAAGACCCAGCTTCGGTACGAACGCAAGGCTCGGAAAAAGCTCGAGTCTTTGACCAAGAGACTAGCTAAGGAACTTGATGAAGAGAGGAAACAAAGGGAAGCCATGGAAGGACTTTGTCAAGAACTTGCAAGAGAGATTTCTTCTCATGAAGCTCAGATGGATCTGATGAAGAAAGAGATCGAAGATGAGAGAAAGATGCTCAGGTTTGGCTTTATATTGCTTTTTCTTTTCTAACTTTTCTAGTTGAACTAAAGTTGGAGTTGAAATGAAGAAACAAATTAACTTTTTCAAACTTATGGTATAACTAAATTTTATTTGTTTATTGTAATTATAATAAGTAATACTTTTAGGATAAAGTGTATAATGATTTTTTTATTTGTTTTTGTGATATAATTGGAAATAATTTGAGTTTAATTGTTAAGTTTGCATTTTCTTACAAAAATTTCTAAACATGGTTGAGATTCACAAATGAATAAATGTTGAATGTTGATGTGAGAATATTAGCTGATGGACCATAGATTATAGGACAAAATGGGTAGCAGACAAAATAATCTAAATAATGGAAATAGCACTTTTTTTTTTCAAGAGTACTTAACAAAACAATTTGAAAGATATAAACCTAAATTAAATAAATCACCCCTAAAGCCAAAACATAATTAAACAAATAGAAATAGACTAACAAATAATTGATGAGAAACTAACAAATTCTAAACAAAACTTCTGTTATATTCTACTACAATGTTAAATCACACTATTGAATTTAACTAAACTTAAGCAAATAATAATTATCAAATAAACAAATTTAACCAAAATTTGATTTTTGATGGGAATAACTTAGTTCTTTAACTTTATTAGATTTAGTTTATTTACTTTAAAATTTGTAACAATTTTGTTTACAAATTTTGATTAGTAGTAAGTCAGTCTTTAAACTTTAAAAATCTTAATATTCAAATTCATCATTCAAATTTTATTAACACCTTGTTATTCATAGGTTAAAAAAAAAACTGTTCTTTTGATGTTTTATTTATCTACATGTATAAGAAAATCAGGATACAAACTAATTAAGTCAAACATGGACTAAATTGTTAATGATATTAAAGTTGATGATATAAATTGAATAAATTATTGGAAAGTGTGATAGTTAATTTTTTTAAAAATCAAGTTAAATCCTATTCTATTATCATATTAAACTATCGTAAATTTTGAAATATCTCAAAACAAAAAAGAATGGATCTTTAATGGAAATGTACTGAATCGAGTTATTAAGTAAGAATTAATTGTCCGGAGTCGTGAAAACTGATTCTTGATTTCTTTTTAAAATGATAATGAAGGTTGGCTGAGGTTTTACGAGAAGAGAGAGTTCAAATGAAGCTTGCAGAGGTAAAAATTGTCTTCGAACATATGCTTTCAGAGATTGAATCAGGAACAACCACCACCAACAACAACACCACCACCACCACCACCGCCATTTTTCCAGACTTTTCTGCCAAACTAAAACACACGGTGGCCGACAACCCGTCTGTGAATTCGGACAACAACAATGCCGATGGCGACGATGACGAATCTTCGGTAAGAGAATCAATGAGATCATCGGACGCTATCGCGTGCAGAAAAACGGGGGATCGAAGAAGTATCTCGCCGGAGATGGAAAATAATAATCCTCACATTGTAAGAGGAATTAAAGGGTTTGTGGAATTCCGGCGAGTGGTTCGAACAAAAGGATCAAAATTAAGTAGAGATTCAGAGGCGAAATTGGAGTGTCAAAAAGCTCAGCTTAGAGTTCTTCTCAAACAAAAACATAGTCTCAGATCGGACAATCTCATTATTACCTAATTTATTTTATATCTTCTCTCCTTTTCTTTTCTATCCCCATTGATCAAGTAATTGGTTGATTGTTTCTTCTCCATATTTTTATTTTTGGGAAAAGTTATATGAACTGATTAAAATATTTCTTTCCTTTCTTGGCTTCGGTTTGAATTTTGTGGAAAATATTTTTGTGAATAGAGTTTCTTGTTTTTCTTTTATTTGAAAGTGACAGTTGAATTAGATGTAAAAGTTTTCGAGGAATTGGTTCAATGATAATTATAAGATAATACATGTTTATGCATTTCAAATTTATCACACACATGAAGATAATTCAGTAAAATTTGGTGGGATAACAAAAAGATTAGAGGTGTAAACTGTGGATGTATTTATGTATATTTCTAATTATAAATTCTGTTATTAATTTGTTTAAAT

mRNA sequence

AAGAAGAAGAAGAAGAAGAAGAGATCAATTAGATATGGAGGATGAGATGATTGATGATACTAATTCTCCAAGCTGGAAACTTTATGAAAACCCTTTTTATATTACCCCTTCTCATCATCATCATCACCGTCATCATCGTCATCAAACTTCTCATAAATCCTCCATTAACACCAACAACAACAACCAACTCCAATTTTATTGCTTGAAATTTTCTTCTTCTTCTTCTTCTGATCTATTTCCTACTAAAAGGCGAATGGATTCAGAGCTCGATCTCGCCCGAAGCCAGATCGTAGAGCTCAAGACCCAGCTTCGGTACGAACGCAAGGCTCGGAAAAAGCTCGAGTCTTTGACCAAGAGACTAGCTAAGGAACTTGATGAAGAGAGGAAACAAAGGGAAGCCATGGAAGGACTTTGTCAAGAACTTGCAAGAGAGATTTCTTCTCATGAAGCTCAGATGGATCTGATGAAGAAAGAGATCGAAGATGAGAGAAAGATGCTCAGGTTGGCTGAGGTTTTACGAGAAGAGAGAGTTCAAATGAAGCTTGCAGAGGTAAAAATTGTCTTCGAACATATGCTTTCAGAGATTGAATCAGGAACAACCACCACCAACAACAACACCACCACCACCACCACCGCCATTTTTCCAGACTTTTCTGCCAAACTAAAACACACGGTGGCCGACAACCCGTCTGTGAATTCGGACAACAACAATGCCGATGGCGACGATGACGAATCTTCGGTAAGAGAATCAATGAGATCATCGGACGCTATCGCGTGCAGAAAAACGGGGGATCGAAGAAGTATCTCGCCGGAGATGGAAAATAATAATCCTCACATTGTAAGAGGAATTAAAGGGTTTGTGGAATTCCGGCGAGTGGTTCGAACAAAAGGATCAAAATTAAGTAGAGATTCAGAGGCGAAATTGGAGTGTCAAAAAGCTCAGCTTAGAGTTCTTCTCAAACAAAAACATAGTCTCAGATCGGACAATCTCATTATTACCTAATTTATTTTATATCTTCTCTCCTTTTCTTTTCTATCCCCATTGATCAAGTAATTGGTTGATTGTTTCTTCTCCATATTTTTATTTTTGGGAAAAGTTATATGAACTGATTAAAATATTTCTTTCCTTTCTTGGCTTCGGTTTGAATTTTGTGGAAAATATTTTTGTGAATAGAGTTTCTTGTTTTTCTTTTATTTGAAAGTGACAGTTGAATTAGATGTAAAAGTTTTCGAGGAATTGGTTCAATGATAATTATAAGATAATACATGTTTATGCATTTCAAATTTATCACACACATGAAGATAATTCAGTAAAATTTGGTGGGATAACAAAAAGATTAGAGGTGTAAACTGTGGATGTATTTATGTATATTTCTAATTATAAATTCTGTTATTAATTTGTTTAAAT

Coding sequence (CDS)

ATGGAGGATGAGATGATTGATGATACTAATTCTCCAAGCTGGAAACTTTATGAAAACCCTTTTTATATTACCCCTTCTCATCATCATCATCACCGTCATCATCGTCATCAAACTTCTCATAAATCCTCCATTAACACCAACAACAACAACCAACTCCAATTTTATTGCTTGAAATTTTCTTCTTCTTCTTCTTCTGATCTATTTCCTACTAAAAGGCGAATGGATTCAGAGCTCGATCTCGCCCGAAGCCAGATCGTAGAGCTCAAGACCCAGCTTCGGTACGAACGCAAGGCTCGGAAAAAGCTCGAGTCTTTGACCAAGAGACTAGCTAAGGAACTTGATGAAGAGAGGAAACAAAGGGAAGCCATGGAAGGACTTTGTCAAGAACTTGCAAGAGAGATTTCTTCTCATGAAGCTCAGATGGATCTGATGAAGAAAGAGATCGAAGATGAGAGAAAGATGCTCAGGTTGGCTGAGGTTTTACGAGAAGAGAGAGTTCAAATGAAGCTTGCAGAGGTAAAAATTGTCTTCGAACATATGCTTTCAGAGATTGAATCAGGAACAACCACCACCAACAACAACACCACCACCACCACCACCGCCATTTTTCCAGACTTTTCTGCCAAACTAAAACACACGGTGGCCGACAACCCGTCTGTGAATTCGGACAACAACAATGCCGATGGCGACGATGACGAATCTTCGGTAAGAGAATCAATGAGATCATCGGACGCTATCGCGTGCAGAAAAACGGGGGATCGAAGAAGTATCTCGCCGGAGATGGAAAATAATAATCCTCACATTGTAAGAGGAATTAAAGGGTTTGTGGAATTCCGGCGAGTGGTTCGAACAAAAGGATCAAAATTAAGTAGAGATTCAGAGGCGAAATTGGAGTGTCAAAAAGCTCAGCTTAGAGTTCTTCTCAAACAAAAACATAGTCTCAGATCGGACAATCTCATTATTACCTAA

Protein sequence

MEDEMIDDTNSPSWKLYENPFYITPSHHHHHRHHRHQTSHKSSINTNNNNQLQFYCLKFSSSSSSDLFPTKRRMDSELDLARSQIVELKTQLRYERKARKKLESLTKRLAKELDEERKQREAMEGLCQELAREISSHEAQMDLMKKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHMLSEIESGTTTTNNNTTTTTTAIFPDFSAKLKHTVADNPSVNSDNNNADGDDDESSVRESMRSSDAIACRKTGDRRSISPEMENNNPHIVRGIKGFVEFRRVVRTKGSKLSRDSEAKLECQKAQLRVLLKQKHSLRSDNLIIT

Homology

[Close]

BLAST of CsGy5G001480 vs. NCBI nr
Match: XP_011654677.1 (PREDICTED: protein BRANCHLESS TRICHOME [Cucumis sativus] >KGN49978.1 hypothetical protein Csa_5G148490 [Cucumis sativus])

HSP 1 Score: 401.0 bits (1029), Expect = 3.9e-108
Identity = 320/322 (99.38%), Postives = 320/322 (99.38%), Query Frame = 0


Query: 1   MEDEMIDDTNSPSWKLYENPFYITPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MEDEMIDDTNSPSWKLYENPFYITPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MEDEMIDDTNSPSWKLYENPFYITPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXDLFPTKRRMDSELDLARSQIVELKTQLRYERKARKKLESLTKXXXXXXXXXXXXX 120
           XXXXXDLFPTKRRMDSELDLARSQIVELKTQLRYERKARKKLESLTKXXXXXXXXXXXXX
Sbjct: 61  XXXXXDLFPTKRRMDSELDLARSQIVELKTQLRYERKARKKLESLTKXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHM 180
           XXXXXXXXXXXXXXXXXXXXXXXXXKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHM
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHM 180

Query: 181 LSEIESGXXXXXXXXXXXXXXXFPDFSAKLKHTVADNPSVNSDNNNADGDDDESSVRESM 240
           LSEIESG XXXXXXXXXXXXX FPDFSAKLKHTVADNPSVNSDNNNADGDDDESSVRESM
Sbjct: 181 LSEIESGTXXXXXXXXXXXXXIFPDFSAKLKHTVADNPSVNSDNNNADGDDDESSVRESM 240

Query: 241 RSSDAIACRKTGDRRSISPEMENNNPHIVRGIKGFVEFRRVVRTKGSKLSRDSEAKLECQ 300
           RSSDAIACRKTGDRRSISPEMENNNPHIVRGIKGFVEFRRVVRTKGSKLSRDSEAKLECQ
Sbjct: 241 RSSDAIACRKTGDRRSISPEMENNNPHIVRGIKGFVEFRRVVRTKGSKLSRDSEAKLECQ 300

Query: 301 KAQLRVLLKQKHSLRSDNLIIT 323
           KAQLRVLLKQKHSLRSDNLIIT
Sbjct: 301 KAQLRVLLKQKHSLRSDNLIIT 322

[Close]

BLAST of CsGy5G001480 vs. NCBI nr
Match: XP_008437448.1 (PREDICTED: protein BRANCHLESS TRICHOME [Cucumis melo])

HSP 1 Score: 286.6 bits (732), Expect = 1.1e-73
Identity = 279/326 (85.58%), Postives = 282/326 (86.50%), Query Frame = 0


Query: 1   MEDEMIDD-TNSPSWKLYENPFYITPS---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MEDEM DD TNSPSWKLYENPFYITPS   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 52  MEDEMNDDNTNSPSWKLYENPFYITPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 111

Query: 61  XXXXXXXXXDLFPTKRRMDSELDLARSQIVELKTQLRYERKARKKLESLTKXXXXXXXXX 120
           XXXXXXXX DLFPTKRRMDSELDLARSQIVELKTQLRYERKARKKLESLTKXXXXXXXXX
Sbjct: 112 XXXXXXXXCDLFPTKRRMDSELDLARSQIVELKTQLRYERKARKKLESLTKXXXXXXXXX 171

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEIEDERKMLRLAEVLREERVQMKLAEVKIV 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEIEDERKMLRLAEVLREERVQMKLAEVKIV
Sbjct: 172 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEIEDERKMLRLAEVLREERVQMKLAEVKIV 231

Query: 181 FEHMLSEIESGXXXXXXXXXXXXXXXFPDFSAKLKHTVADNPSVNSDNNNADGDDDESSV 240
           FEHMLSEIESG XXXXXXXXXXXXXX                                 +
Sbjct: 232 FEHMLSEIESG-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 291

Query: 241 RESMRSSDAIACRKTGDRRSISPEMENNNPHIVRGIKGFVEFRRVVRTKGSKLSRDSEAK 300
           RESMR SDAIACR  G RRSISPEMENNNPHIVRGIKGFVEFRRVVRTKGSKLSRDSEAK
Sbjct: 292 RESMR-SDAIACRNMGVRRSISPEMENNNPHIVRGIKGFVEFRRVVRTKGSKLSRDSEAK 351

Query: 301 LECQKAQLRVLLKQKHSLRSDNLIIT 323
           LECQKAQL+VLLKQKH+LRSDNLIIT
Sbjct: 352 LECQKAQLKVLLKQKHTLRSDNLIIT 375

[Close]

BLAST of CsGy5G001480 vs. NCBI nr
Match: XP_023520493.1 (protein BRANCHLESS TRICHOME-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 243.8 bits (621), Expect = 7.9e-61
Identity = 199/326 (61.04%), Postives = 218/326 (66.87%), Query Frame = 0


Query: 5   MIDDTNSPSWKLYENPFYITPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 64
           M+ D + PSWKLYENPFYI+PS                                      
Sbjct: 3   MMKDDSCPSWKLYENPFYISPS-----------HRQTPHKSAINKHLQFYCLKLASSSSF 62

Query: 65  XDLFPTKRRMDSELDLARSQIVELKTQLRYERKARKKLESLTKXXXXXXXXXXXXXXXXX 124
            DL PTK+RMDSELDLARS IVELKT+LRYERKARKKLESL KXXXXXXXXXXXXXXXXX
Sbjct: 63  CDLVPTKKRMDSELDLARSHIVELKTELRYERKARKKLESLAKXXXXXXXXXXXXXXXXX 122

Query: 125 XXXXXXXXXXXXXXXXXXXXXKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHMLSEI 184
           XXXXXXXXXXXXXX       K+IEDERKMLRL+EVLREERVQMKLAEVKIVFE MLSEI
Sbjct: 123 XXXXXXXXXXXXXXTKIDLMKKKIEDERKMLRLSEVLREERVQMKLAEVKIVFEDMLSEI 182

Query: 185 ESGXXXXXXXXXXXXXXXFPDFSAKLKHTVADNPSVNSDNNNADGDDD---ESSVRESMR 244
           ESG                     KLK T ADN S +S NNNA GD     ES+  +++ 
Sbjct: 183 ESG---------------------KLKQTAADNSSASSINNNAVGDGSSPAESTALDAVV 242

Query: 245 SSDAIACR----KTGDRRSISPEMENNNPHIVRGIKGFVEFRRVVRTKGSKLSRDSEAKL 304
               ++C+          S SPE+EN NPHIVRGIKGFVEFRRVVRTKGSK SRDS+AKL
Sbjct: 243 GEQRLSCKMEIPAVAAPTSGSPEVENINPHIVRGIKGFVEFRRVVRTKGSK-SRDSDAKL 295

Query: 305 ECQKAQLRVLLKQKH-SLRSDNLIIT 323
           ECQKAQLRVLLKQK  S+RS+NL IT
Sbjct: 303 ECQKAQLRVLLKQKEGSVRSNNLFIT 295

[Close]

BLAST of CsGy5G001480 vs. NCBI nr
Match: XP_023521394.1 (protein BRANCHLESS TRICHOME-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 243.4 bits (620), Expect = 1.0e-60
Identity = 199/326 (61.04%), Postives = 217/326 (66.56%), Query Frame = 0


Query: 5   MIDDTNSPSWKLYENPFYITPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 64
           M+ D   PSWKLYENPFYI+PS                                      
Sbjct: 3   MMKDDTCPSWKLYENPFYISPS-----------HRQTPHKSAINKHLQFYCLKLASSSSF 62

Query: 65  XDLFPTKRRMDSELDLARSQIVELKTQLRYERKARKKLESLTKXXXXXXXXXXXXXXXXX 124
            DL PTK+RMDSELDLARS IVELKT+LRYERKARKKLESL KXXXXXXXXXXXXXXXXX
Sbjct: 63  CDLVPTKKRMDSELDLARSHIVELKTELRYERKARKKLESLAKXXXXXXXXXXXXXXXXX 122

Query: 125 XXXXXXXXXXXXXXXXXXXXXKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHMLSEI 184
           XXXXXXXXXXXXXX       K+IEDERKMLRL+EVLREERVQMKLAEVKIVFE MLSEI
Sbjct: 123 XXXXXXXXXXXXXXTKIDLMKKKIEDERKMLRLSEVLREERVQMKLAEVKIVFEDMLSEI 182

Query: 185 ESGXXXXXXXXXXXXXXXFPDFSAKLKHTVADNPSVNSDNNNADGDDD---ESSVRESMR 244
           ESG                     KLK T ADN S +S NNNA GD     ES+  +++ 
Sbjct: 183 ESG---------------------KLKQTAADNSSASSINNNAVGDGSSPAESTALDAVV 242

Query: 245 SSDAIACR----KTGDRRSISPEMENNNPHIVRGIKGFVEFRRVVRTKGSKLSRDSEAKL 304
               ++C+          S SPE+EN NPHIVRGIKGFVEFRRVVRTKGSK SRDS+AKL
Sbjct: 243 GEQRLSCKMEIPAVAAPTSGSPEVENINPHIVRGIKGFVEFRRVVRTKGSK-SRDSDAKL 295

Query: 305 ECQKAQLRVLLKQKH-SLRSDNLIIT 323
           ECQKAQLRVLLKQK  S+RS+NL IT
Sbjct: 303 ECQKAQLRVLLKQKEGSVRSNNLFIT 295

[Close]

BLAST of CsGy5G001480 vs. NCBI nr
Match: XP_022928852.1 (protein BRANCHLESS TRICHOME-like [Cucurbita moschata])

HSP 1 Score: 242.7 bits (618), Expect = 1.8e-60
Identity = 199/326 (61.04%), Postives = 216/326 (66.26%), Query Frame = 0


Query: 5   MIDDTNSPSWKLYENPFYITPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 64
           M+ D   PSWKLYENPFYI+PS                                      
Sbjct: 3   MMKDDTCPSWKLYENPFYISPS-----------HRQTPHKSAINKHLQFYCLKLASSSSF 62

Query: 65  XDLFPTKRRMDSELDLARSQIVELKTQLRYERKARKKLESLTKXXXXXXXXXXXXXXXXX 124
            DL PTK+RMDSELDLARS IVELKT+LRYERKARKKLESL KXXXXXXXXXXXXXXXXX
Sbjct: 63  CDLVPTKKRMDSELDLARSHIVELKTELRYERKARKKLESLAKXXXXXXXXXXXXXXXXX 122

Query: 125 XXXXXXXXXXXXXXXXXXXXXKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHMLSEI 184
           XXXXXXXXXXXXXX       K+IEDERKMLRL+EVLREERVQMKLAEVKIVFE MLSEI
Sbjct: 123 XXXXXXXXXXXXXXTKIDLMKKKIEDERKMLRLSEVLREERVQMKLAEVKIVFEDMLSEI 182

Query: 185 ESGXXXXXXXXXXXXXXXFPDFSAKLKHTVADNPSVNSDNNNADGDDD---ESSVRESMR 244
           ESG                     KLK T ADN S +S NNNA GD     ES+  +++ 
Sbjct: 183 ESG---------------------KLKQTAADNSSASSINNNAVGDGSSPAESTALDAVV 242

Query: 245 SSDAIACR----KTGDRRSISPEMENNNPHIVRGIKGFVEFRRVVRTKGSKLSRDSEAKL 304
               ++C+          S SPE+EN NPHIVRGIKGFVEFRRVVRTKGSK SRDS+AKL
Sbjct: 243 GEQRLSCKMEIPAVAAPTSGSPEVENINPHIVRGIKGFVEFRRVVRTKGSK-SRDSDAKL 295

Query: 305 ECQKAQLRVLLKQKH-SLRSDNLIIT 323
           ECQKAQLRVLLKQK  S+RS NL IT
Sbjct: 303 ECQKAQLRVLLKQKEGSVRSKNLFIT 295

[Close]

BLAST of CsGy5G001480 vs. TAIR10
Match: AT1G64690.1 (branchless trichome)

HSP 1 Score: 45.4 bits (106), Expect = 7.5e-05
Identity = 32/89 (35.96%), Postives = 45/89 (50.56%), Query Frame = 0


Query: 233 ESSVRESMRSSDAIACRKTGDRRSISPEMEN-NNPHIVRGIKGFVEFRRVVRTKGSKLSR 292
           E + R+  R  + +   K  +R   SP      NP I RGI  F    R +R+K  K   
Sbjct: 184 EEANRQGERERNRMMKPKILERACSSPARRRCENPQIKRGINPFPRVMRAIRSKSEKWG- 243

Query: 293 DSEAKLECQKAQLRVLLKQKHSLRSDNLI 321
              +KLECQK QL++LL+QK + R   L+
Sbjct: 244 ---SKLECQKVQLKILLRQKTTPRCTPLL 268

[Close]

BLAST of CsGy5G001480 vs. TAIR10
Match: AT5G22310.1 (unknown protein)

HSP 1 Score: 45.1 bits (105), Expect = 9.8e-05
Identity = 23/40 (57.50%), Postives = 30/40 (75.00%), Query Frame = 0


Query: 146 KEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHMLSEIE 186
           KE+E ER+M+ +A+VLREERVQMKL E K  FE   + +E
Sbjct: 314 KEMEKEREMMHIADVLREERVQMKLTEAKFEFEDKYAAVE 353

[Close]

BLAST of CsGy5G001480 vs. TAIR10
Match: AT1G50660.1 (unknown protein)

HSP 1 Score: 44.3 bits (103), Expect = 1.7e-04
Identity = 21/39 (53.85%), Postives = 31/39 (79.49%), Query Frame = 0


Query: 146 KEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHMLSEI 185
           +E++DER+ML++AEV REERVQMKL + K+  E   S++
Sbjct: 375 EEVDDERRMLQMAEVWREERVQMKLIDAKVALEERYSQM 413

[Close]

BLAST of CsGy5G001480 vs. TAIR10
Match: AT3G20350.1 (unknown protein)

HSP 1 Score: 44.3 bits (103), Expect = 1.7e-04
Identity = 21/39 (53.85%), Postives = 31/39 (79.49%), Query Frame = 0


Query: 146 KEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHMLSEI 185
           +E++DER+ML++AEV REERVQMKL + K+  E   S++
Sbjct: 352 EEVDDERRMLQMAEVWREERVQMKLIDAKVTLEEKYSQM 390

[Close]

BLAST of CsGy5G001480 vs. TrEMBL
Match: tr|A0A0A0KK85|A0A0A0KK85_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G148490 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 2.6e-108
Identity = 320/322 (99.38%), Postives = 320/322 (99.38%), Query Frame = 0


Query: 1   MEDEMIDDTNSPSWKLYENPFYITPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MEDEMIDDTNSPSWKLYENPFYITPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MEDEMIDDTNSPSWKLYENPFYITPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXDLFPTKRRMDSELDLARSQIVELKTQLRYERKARKKLESLTKXXXXXXXXXXXXX 120
           XXXXXDLFPTKRRMDSELDLARSQIVELKTQLRYERKARKKLESLTKXXXXXXXXXXXXX
Sbjct: 61  XXXXXDLFPTKRRMDSELDLARSQIVELKTQLRYERKARKKLESLTKXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHM 180
           XXXXXXXXXXXXXXXXXXXXXXXXXKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHM
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHM 180

Query: 181 LSEIESGXXXXXXXXXXXXXXXFPDFSAKLKHTVADNPSVNSDNNNADGDDDESSVRESM 240
           LSEIESG XXXXXXXXXXXXX FPDFSAKLKHTVADNPSVNSDNNNADGDDDESSVRESM
Sbjct: 181 LSEIESGTXXXXXXXXXXXXXIFPDFSAKLKHTVADNPSVNSDNNNADGDDDESSVRESM 240

Query: 241 RSSDAIACRKTGDRRSISPEMENNNPHIVRGIKGFVEFRRVVRTKGSKLSRDSEAKLECQ 300
           RSSDAIACRKTGDRRSISPEMENNNPHIVRGIKGFVEFRRVVRTKGSKLSRDSEAKLECQ
Sbjct: 241 RSSDAIACRKTGDRRSISPEMENNNPHIVRGIKGFVEFRRVVRTKGSKLSRDSEAKLECQ 300

Query: 301 KAQLRVLLKQKHSLRSDNLIIT 323
           KAQLRVLLKQKHSLRSDNLIIT
Sbjct: 301 KAQLRVLLKQKHSLRSDNLIIT 322

[Close]

BLAST of CsGy5G001480 vs. TrEMBL
Match: tr|A0A1S3AUL6|A0A1S3AUL6_CUCME (protein BRANCHLESS TRICHOME OS=Cucumis melo OX=3656 GN=LOC103482864 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 7.0e-74
Identity = 279/326 (85.58%), Postives = 282/326 (86.50%), Query Frame = 0


Query: 1   MEDEMIDD-TNSPSWKLYENPFYITPS---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MEDEM DD TNSPSWKLYENPFYITPS   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 52  MEDEMNDDNTNSPSWKLYENPFYITPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 111

Query: 61  XXXXXXXXXDLFPTKRRMDSELDLARSQIVELKTQLRYERKARKKLESLTKXXXXXXXXX 120
           XXXXXXXX DLFPTKRRMDSELDLARSQIVELKTQLRYERKARKKLESLTKXXXXXXXXX
Sbjct: 112 XXXXXXXXCDLFPTKRRMDSELDLARSQIVELKTQLRYERKARKKLESLTKXXXXXXXXX 171

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEIEDERKMLRLAEVLREERVQMKLAEVKIV 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEIEDERKMLRLAEVLREERVQMKLAEVKIV
Sbjct: 172 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEIEDERKMLRLAEVLREERVQMKLAEVKIV 231

Query: 181 FEHMLSEIESGXXXXXXXXXXXXXXXFPDFSAKLKHTVADNPSVNSDNNNADGDDDESSV 240
           FEHMLSEIESG XXXXXXXXXXXXXX                                 +
Sbjct: 232 FEHMLSEIESG-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 291

Query: 241 RESMRSSDAIACRKTGDRRSISPEMENNNPHIVRGIKGFVEFRRVVRTKGSKLSRDSEAK 300
           RESMR SDAIACR  G RRSISPEMENNNPHIVRGIKGFVEFRRVVRTKGSKLSRDSEAK
Sbjct: 292 RESMR-SDAIACRNMGVRRSISPEMENNNPHIVRGIKGFVEFRRVVRTKGSKLSRDSEAK 351

Query: 301 LECQKAQLRVLLKQKHSLRSDNLIIT 323
           LECQKAQL+VLLKQKH+LRSDNLIIT
Sbjct: 352 LECQKAQLKVLLKQKHTLRSDNLIIT 375

[Close]

BLAST of CsGy5G001480 vs. TrEMBL
Match: tr|A0A251UAJ3|A0A251UAJ3_HELAN (Putative branchless trichome OS=Helianthus annuus OX=4232 GN=BLT PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 4.3e-31
Identity = 162/314 (51.59%), Postives = 189/314 (60.19%), Query Frame = 0


Query: 9   TNSPSWKLYENPFYITPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLF 68
           T+SP+WKLYENPFY +P   XXXXXXXXXXXXXXXXX                    DL 
Sbjct: 15  TSSPTWKLYENPFYTSPQIHXXXXXXXXXXXXXXXXXKQLHLLHLPVSTRKITASFWDLT 74

Query: 69  PTKRRMDSELDLARSQIVELKTQLRYERKARKKLESLTKXXXXXXXXXXXXXXXXXXXXX 128
             K  MDSELD A++QI+ELK QL YERKARKK+E L K      XXXXXXXXXXXXXXX
Sbjct: 75  FIKPFMDSELDTAKAQIMELKAQLEYERKARKKMEFLNKKLAKEVXXXXXXXXXXXXXXX 134

Query: 129 XXXXXXXXXXXXXXXXXKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHMLSEIESGX 188
           XXXXXXXXXXXXXXXXX     ERKMLR+AEVLREERVQMKL+E K + E  +SE+E   
Sbjct: 135 XXXXXXXXXXXXXXXXXXXXXXERKMLRVAEVLREERVQMKLSEAKFILEEKISELE--- 194

Query: 189 XXXXXXXXXXXXXXFPDFSAKLKHTVADNPSVNSDNNNADGDDDESSVRESMRSSDAIAC 248
                               K+ H   D      +N N    +               + 
Sbjct: 195 ------------------IRKMTHKNNDQEQEEPENRNVISGN---------------SM 254

Query: 249 RKTGDRRSISPEMENNNPHIVRGIKGFVEFRRVVRTKGSKLSRDSEAKLECQKAQLRVLL 308
           +  G + S+ PE    NPHI RGI+GFVEF RVVR  GS+ SR    KLECQKAQL +LL
Sbjct: 255 KLQGRKVSLEPE----NPHIKRGIRGFVEFPRVVRAIGSR-SRHLGTKLECQKAQLMILL 287

Query: 309 KQKHSLRSDNLIIT 323
           KQK  ++S+NLI++
Sbjct: 315 KQKTQIQSNNLIMS 287

[Close]

BLAST of CsGy5G001480 vs. TrEMBL
Match: tr|A0A1R3IBI8|A0A1R3IBI8_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_13337 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 7.4e-31
Identity = 139/330 (42.12%), Postives = 169/330 (51.21%), Query Frame = 0


Query: 4   EMIDDTNSPSWKLYENPFYITPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 63
           E I+ +  PSWKLY+NPFY               XXXXXXXXXX                
Sbjct: 28  EHINTSTCPSWKLYDNPFY-----------NPQHXXXXXXXXXXKLLNQLSARKIAASFW 87

Query: 64  XXDLFPTKRRMDSELDLARSQIVELKTQLRYERKARKKLESLTKXXXXXXXXXXXXXXXX 123
               F     MDSELD AR++I++LK +L +ERKARKK ESL K  XXXXXXX       
Sbjct: 88  DLTFFKPAAVMDSELDFARAEIIDLKAELEFERKARKKAESLNKRLXXXXXXXRRGTEAL 147

Query: 124 XXXXXXXXXXXXXXXXXXXXXXKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHMLSE 183
                                 KE E+ERKMLR+AEVLRE       AE KI+FE  LSE
Sbjct: 148 EKVCEQLAREISLFKSEIDKMKKEFEEERKMLRMAEVLREXXXXXXXAEAKILFEEKLSE 207

Query: 184 IESGXXXXXXXXXXXXXXXFPDFSAKL----KHTVADNPSVNSDNNNADGDDDESS---- 243
           +E                      ++L    K +  DN  +NS+N+N   D  ESS    
Sbjct: 208 LEETKLQKNNKEDKTLTANLSGKFSRLVFSEKLSSCDN-IINSNNSNICADSRESSRIFG 267

Query: 244 VRESMRSSDAIACRKTGD---RRSISPEMENNNPHIVRGIKGFVEFRRVVRTKGSKLSRD 303
           + E     D I+   +     +R  SPE E  NPHI RGIKGFVEF RVVR  GSK SR 
Sbjct: 268 LSEKPSCYDNISTAVSSSMAIQRKASPEAE--NPHIKRGIKGFVEFPRVVRAIGSK-SRH 327

Query: 304 SEAKLECQKAQLRVLLKQKHSLRSDNLIIT 323
             +KLECQKAQLR+LLKQK  +RS++LI++
Sbjct: 328 WGSKLECQKAQLRILLKQKSPIRSNSLIMS 342

[Close]

BLAST of CsGy5G001480 vs. TrEMBL
Match: tr|A0A1U8N0Z3|A0A1U8N0Z3_GOSHI (protein BRANCHLESS TRICHOME-like OS=Gossypium hirsutum OX=3635 GN=LOC107943524 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 9.6e-31
Identity = 110/257 (42.80%), Postives = 133/257 (51.75%), Query Frame = 0


Query: 67  LFPTKRRMDSELDLARSQIVELKTQLRYERKARKKLESLTKXXXXXXXXXXXXXXXXXXX 126
           LF     MDSELD+AR+QI++L+ +L YE KARKK ESL K                   
Sbjct: 79  LFGPSSTMDSELDIARAQIIDLQAELDYEVKARKKAESLNKKLAKDLAEERRGREALERV 138

Query: 127 XXXXXXXXXXXXXXXXXXXKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHMLSEIES 186
                              ++ E+ERKMLR+AEVLREERVQMKLAE K +FE  L E+E 
Sbjct: 139 CDKLAREISLDKAEIDRMRRDFEEERKMLRMAEVLREERVQMKLAEAKFLFEEKLLELEE 198

Query: 187 GXXXXXXXXXXXXXXXF-PDFSAKLKHTVADNPSVNSDNNNADGDDDESSVRESMRSSDA 246
                           F  + S K    V    + ++ N+                SS A
Sbjct: 199 TKRVLPADKEDKPPAAFTTNLSGKFSRLVFSEKASSTCND----------------SSMA 258

Query: 247 IACRKTGDRRSISPEMENNNPHIVRGIKGFVEFRRVVRTKGSKLSRDSEAKLECQKAQLR 306
           I       +R  SPE E  NPHI RGIKGFVEF RVVR  GSK SR   +KLECQKAQLR
Sbjct: 259 I-------QRKASPETE--NPHIKRGIKGFVEFPRVVRAIGSK-SRHWGSKLECQKAQLR 309

Query: 307 VLLKQKHSLRSDNLIIT 323
           VLLKQK  +RS+NLI++
Sbjct: 319 VLLKQKSPIRSNNLIMS 309

The following BLAST results are available for this feature:

BLAST of CsGy5G001480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011654677.1	3.9e-108	99.38	PREDICTED: protein BRANCHLESS TRICHOME [Cucumis sativus] >KGN49978.1 hypothetica...	[more]
XP_008437448.1	1.1e-73	85.58	PREDICTED: protein BRANCHLESS TRICHOME [Cucumis melo]	[more]
XP_023520493.1	7.9e-61	61.04	protein BRANCHLESS TRICHOME-like [Cucurbita pepo subsp. pepo]	[more]
XP_023521394.1	1.0e-60	61.04	protein BRANCHLESS TRICHOME-like [Cucurbita pepo subsp. pepo]	[more]
XP_022928852.1	1.8e-60	61.04	protein BRANCHLESS TRICHOME-like [Cucurbita moschata]	[more]

BLAST of CsGy5G001480 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G64690.1	7.5e-05	35.96	branchless trichome	[more]
AT5G22310.1	9.8e-05	57.50	unknown protein	[more]
AT1G50660.1	1.7e-04	53.85	unknown protein	[more]
AT3G20350.1	1.7e-04	53.85	unknown protein	[more]

BLAST of CsGy5G001480 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy5G001480 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KK85\|A0A0A0KK85_CUCSA	2.6e-108	99.38	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G148490 PE=4 SV=1	[more]
tr\|A0A1S3AUL6\|A0A1S3AUL6_CUCME	7.0e-74	85.58	protein BRANCHLESS TRICHOME OS=Cucumis melo OX=3656 GN=LOC103482864 PE=4 SV=1	[more]
tr\|A0A251UAJ3\|A0A251UAJ3_HELAN	4.3e-31	51.59	Putative branchless trichome OS=Helianthus annuus OX=4232 GN=BLT PE=4 SV=1	[more]
tr\|A0A1R3IBI8\|A0A1R3IBI8_COCAP	7.4e-31	42.12	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_13337 PE=4 ...	[more]
tr\|A0A1U8N0Z3\|A0A1U8N0Z3_GOSHI	9.6e-31	42.80	protein BRANCHLESS TRICHOME-like OS=Gossypium hirsutum OX=3635 GN=LOC107943524 P...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G001480.1	CsGy5G001480.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 71..91
None	No IPR available	COILS	Coil	Coil	coord: 95..154
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 230..257
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 215..265
None	No IPR available	PANTHER	PTHR31071:SF10	F25C20.16-RELATED	coord: 65..311
None	No IPR available	PANTHER	PTHR31071	FAMILY NOT NAMED	coord: 65..311

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy5G001480	Cla011327	Watermelon (97103) v1	cgybwmB381
CsGy5G001480	Csa5G148490	Cucumber (Chinese Long) v2	cgybcuB224
CsGy5G001480	MELO3C005789	Melon (DHL92) v3.5.1	cgybmeB298
CsGy5G001480	ClCG01G001480	Watermelon (Charleston Gray)	cgybwcgB332
CsGy5G001480	CSPI05G04240	Wild cucumber (PI 183967)	cgybcpiB226
CsGy5G001480	CmaCh15G013160	Cucurbita maxima (Rimu)	cgybcmaB608
CsGy5G001480	CmoCh15G013810	Cucurbita moschata (Rifu)	cgybcmoB583
CsGy5G001480	Lsi09G001350	Bottle gourd (USVL1VR-Ls)	cgyblsiB294
CsGy5G001480	Cp4.1LG00g00700	Cucurbita pepo (Zucchini)	cgybcpeB580
CsGy5G001480	Cp4.1LG05g07740	Cucurbita pepo (Zucchini)	cgybcpeB685
CsGy5G001480	MELO3C005789.2	Melon (DHL92) v3.6.1	cgybmedB298
CsGy5G001480	CsaV3_5G001620	Cucumber (Chinese Long) v3	cgybcucB232
CsGy5G001480	Cla97C01G001490	Watermelon (97103) v2	cgybwmbB319
CsGy5G001480	Bhi12G000073	Wax gourd	cgybwgoB413
CsGy5G001480	Carg08531	Silver-seed gourd	carcgybB0709
CsGy5G001480	Carg21308	Silver-seed gourd	carcgybB0370

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy5G001480	Cucurbita maxima (Rimu)	cgybcmaB638
CsGy5G001480	Cucurbita moschata (Rifu)	cgybcmoB617