CsGy5G000530 (gene) Cucumber (Gy14) v2

Overview
NameCsGy5G000530
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr5 : 297803 .. 300087 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGAGAAGGTGAATTTGATTGGACTCGGTTCAGTGTTCTTGTGGTGGGTGAAAAAAACGTATGCGAGCTTTCTCCTATCCCGTTAATCGACTTTAATTTCACGCATTTTGAAGAAGAAATTCGGCGATCTTAGCTTTGATTGGTCGCCTGGTTCTATTGATTCAGCTGGAGAATTCCTTGGCTGTCTTCTTGTGATGTGATTAGGATGACAATATGCTCATGTGGGTTAATTGTTTCTATGTGGATTCAGATTATGAACAAGTTTTCTTCCATATCAAGGCATAGGTTCTCCATGTCAGGCCATTATAGAAGCTTGCAGGAAAATGTTAAGGTGTGACTAGAAAAGTGGAGTGGAGCATCTTTTACTTGCTTTTTGCTGTAGTTTTCTTTTCCCAACTAGACAAAATAGTACGTGGCAATATTCTTCAATGAGTATTTCTGTTGTTGATTTAACTTTGACATCTTTTTTTTTTCCTGATTTTAATTCATATTGTCTGCCAATTGGGAACATGAACTGTTGTTTGGATTTAAATAAGCCGCTCATTCCCTTTGGACTGGAAAGGCGTCTTTTAAGAATAAATGAAGGTTCTTTGGGCTTTTATGATTATATAAATCATCCCAAAATTACTTTAGAAGTTTCGTTTATTGAACTGGCTCCTCCATTTTGAAAAGGAAAATTCTGTTTTTATAGAAAAATTGAGAATGGTTATTTAGTGCCATTAACAAGACCATTGGTTTTCTTGTGTGTTTATTCTGAAATGAACAATTGTTTAGGATTTTCTTCGTCCCTTTGCATTATTCGGTATTATTTTTTACTATATGAGGTTATAGTTCTATTCTTGGATCTTTTTCATTTTATTGGATATCAGATGAGGCATCTTGATGCATCTATGCTAAGAGAACTAACAGTTGTTTGGCCTGGTTTTAGGGAACCAAAAAAAGAAAAAAAATAAATAAATACAGTTCTTATTCACCTCTTTCTCATTGCAGTTGGCAATGCATCTCCATTCCTCAAAACTTTGCTTAGCTGCGTACTTTGGTGATATGTGAAGTATCAATATATGGCAAAAAGAAAGTTGATTACACAAGAATTCAAAGTGGGGGGATCTCAATTGGCTCCACCTATAGTACCTTCCTTTCCTTTACCCTACACCTACAGAAAGGGGCCTTCAGCTACTGCAATTACCTCATGCCTTCCACTTACTGTCACTTGCCTTAGATTTTTATCTATCTCAATCTGGATTCTTCTACTTTGTCTTTTATGACTAACAGCTACATAAAGGAAGAAAAAGGAGTGGTATTGGATTATTTTTTGCGATGGGCTTCATTGGCTGTAAGCGGTATATTACGTAGGATTGGTAACATGCTTGTTGTAGTATAAAAATTGATCATTGTAATACTTGGTGCATGCTGCATGTTGAGCTGCCTGTGTGATTGATAGCCGTGAGATCTCGTGTAACTTACATTTCTTGACTGCATGTTGAATTAGTAAGATAGACGTTAAGAGAGGGTTTTCCGGTTACAGGGTGGATTTGACAGGGAGGCGTTCAAGCCTACATACCATATGTGGGCTTATTTATCATATATTATGAGCTGTATAATCAACGGGTTGATTCACAAATTTTTACACTTCACAAAATGCACAAACTAAATATACACTAGATAATTGTCAATTACTTTGCACAATTCTCAGCATCTCCAACCTGTAAGCCAAGTGTAAGACATATGCAACATGCCCAAATCCAAGATTTGGAATGTGATTTGAAATTCGTTCCTCTTTAGTACTATATATAATGCCCTTGAACTAGTTAGAATATGGATTTTAAATCCAGATTTTAATCCTAGATTGGAAGTATTACAAGTCTTTATTCTTGAAACTTGTTCGTGACACATACAATGAGACCTAGCTAGGAAATAATAGGTGCATGAAAATATCAGGGGCTAAGTATCGAATTTGGATTTCAAATCCGAACATCCACGCATTTTTCCTTTTTGTATGTTCAGTCTAGCACAACATATATCAATATCTATGGAGGAGCAGAGCGAGAACGTGGTGCCCAAAGATATCATCTTCTCTCTACTCTAGTCACATTAAAAATAACGAAAAACAAAGGAAGTGGATTTTGTGTCTGATATTTGGAAAGCTATGTGAAAACAAGCATGTGTAAGAAGGTTCTTTCTTTTCGGCCAAAAGCTCATTGTATTACATAAAGTACTATTTGGGTGCAGTTCTTTTTGTGAAGTAACCAAAGGACAAGGCTGAAGCAGGCAAAATCAGAAG

mRNA sequence

ATGGACGAGAAGGTGAATTTGATTGGACTCGGTTCAGTGTTCTTGTGCTGGAGAATTCCTTGGCTGTCTTCTTGTGATGTGATTAGGATGACAATATGCTCATGTGGGTTAATTGTTTCTATGTGGATTCAGATTATGAACAAGTTTTCTTCCATATCAAGGCATAGGTTCTCCATGTCAGGCCATTATAGAAGCTTGCAGGAAAATGTTAAGTTGGCAATGCATCTCCATTCCTCAAAACTTTGCTTAGCTGCGTACTTTGGTGATATGTGAAGTATCAATATATGGCAAAAAGAAAGTTGATTACACAAGAATTCAAAGTGGGGGGATCTCAATTGGCTCCACCTATAGTACCTTCCTTTCCTTTACCCTACACCTACAGAAAGGGGCCTTCAGCTACTGCAATTACCTCATGCCTTCCACTTACTGTCACTTGCCTTAGATTTTTATCTATCTCAATCTGGATTCTTCTACTTTGTCTTTTATGACTAACAGCTACATAAAGGAAGAAAAAGGAGTGGTATTGGATTATTTTTTGCGATGGGCTTCATTGGCTGTAAGCGTCTAGCACAACATATATCAATATCTATGGAGGAGCAGAGCGAGAACGTGGTGCCCAAAGATATCATCTTCTCTCTACTCTAGTCACATTAAAAATAACGAAAAACAAAGGAAGTGGATTTTGTGTCTGATATTTGGAAAGCTATGTGAAAACAAGCATGTGTAAGAAGGTTCTTTCTTTTCGGCCAAAAGCTCATTGTATTACATAAAGTACTATTTGGGTGCAGTTCTTTTTGTGAAGTAACCAAAGGACAAGGCTGAAGCAGGCAAAATCAGAAG

Coding sequence (CDS)

ATGGACGAGAAGGTGAATTTGATTGGACTCGGTTCAGTGTTCTTGTGCTGGAGAATTCCTTGGCTGTCTTCTTGTGATGTGATTAGGATGACAATATGCTCATGTGGGTTAATTGTTTCTATGTGGATTCAGATTATGAACAAGTTTTCTTCCATATCAAGGCATAGGTTCTCCATGTCAGGCCATTATAGAAGCTTGCAGGAAAATGTTAAGTTGGCAATGCATCTCCATTCCTCAAAACTTTGCTTAGCTGCGTACTTTGGTGATATGTGA

Protein sequence

MDEKVNLIGLGSVFLCWRIPWLSSCDVIRMTICSCGLIVSMWIQIMNKFSSISRHRFSMSGHYRSLQENVKLAMHLHSSKLCLAAYFGDM
Homology
[Close]
BLAST of CsGy5G000530 vs. NCBI nr
Match: KGN49874.1 (hypothetical protein Csa_5G139520 [Cucumis sativus])

HSP 1 Score: 95.1 bits (235), Expect = 1.3e-16
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0 

Query: 45 IMNKFSSISRHRFSMSGHYRSLQENVKLAMHLHSSKLCLAAYFGDM 91
          IMNKFSSISRHRFSMSGHYRSLQENVKLAMHLHSSKLCLAAYFGDM
Sbjct: 31 IMNKFSSISRHRFSMSGHYRSLQENVKLAMHLHSSKLCLAAYFGDM 76

[Close]
BLAST of CsGy5G000530 vs. TrEMBL
Match: tr|A0A0A0KLY2|A0A0A0KLY2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139520 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 8.4e-17
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0 

Query: 45 IMNKFSSISRHRFSMSGHYRSLQENVKLAMHLHSSKLCLAAYFGDM 91
          IMNKFSSISRHRFSMSGHYRSLQENVKLAMHLHSSKLCLAAYFGDM
Sbjct: 31 IMNKFSSISRHRFSMSGHYRSLQENVKLAMHLHSSKLCLAAYFGDM 76

The following BLAST results are available for this feature:
BLAST of CsGy5G000530 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN49874.11.3e-16100.00hypothetical protein Csa_5G139520 [Cucumis sativus][more]
BLAST of CsGy5G000530 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy5G000530 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy5G000530 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KLY2|A0A0A0KLY2_CUCSA8.4e-17100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139520 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G000530.1CsGy5G000530.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy5G000530Csa5G139520Cucumber (Chinese Long) v2cgybcuB224
CsGy5G000530CSPI05G03270Wild cucumber (PI 183967)cgybcpiB226
CsGy5G000530CsaV3_5G000600Cucumber (Chinese Long) v3cgybcucB232
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy5G000530Wild cucumber (PI 183967)cgybcpiB208
CsGy5G000530Silver-seed gourdcarcgybB0313
CsGy5G000530Silver-seed gourdcarcgybB0513
CsGy5G000530Silver-seed gourdcarcgybB0546
CsGy5G000530Silver-seed gourdcarcgybB0978
CsGy5G000530Cucumber (Chinese Long) v3cgybcucB211
CsGy5G000530Watermelon (97103) v2cgybwmbB319
CsGy5G000530Watermelon (97103) v2cgybwmbB364
CsGy5G000530Watermelon (97103) v2cgybwmbB366
CsGy5G000530Wax gourdcgybwgoB430
CsGy5G000530Wax gourdcgybwgoB457
CsGy5G000530Cucumber (Gy14) v2cgybcgybB085
CsGy5G000530Cucurbita maxima (Rimu)cgybcmaB602
CsGy5G000530Cucurbita maxima (Rimu)cgybcmaB597
CsGy5G000530Cucurbita maxima (Rimu)cgybcmaB628
CsGy5G000530Cucurbita maxima (Rimu)cgybcmaB618
CsGy5G000530Cucurbita maxima (Rimu)cgybcmaB639
CsGy5G000530Cucurbita maxima (Rimu)cgybcmaB644
CsGy5G000530Cucurbita moschata (Rifu)cgybcmoB568
CsGy5G000530Cucurbita moschata (Rifu)cgybcmoB575
CsGy5G000530Cucurbita moschata (Rifu)cgybcmoB594
CsGy5G000530Cucurbita moschata (Rifu)cgybcmoB607
CsGy5G000530Cucurbita moschata (Rifu)cgybcmoB618
CsGy5G000530Cucurbita pepo (Zucchini)cgybcpeB583
CsGy5G000530Cucurbita pepo (Zucchini)cgybcpeB610
CsGy5G000530Cucurbita pepo (Zucchini)cgybcpeB617
CsGy5G000530Cucurbita pepo (Zucchini)cgybcpeB678
CsGy5G000530Cucurbita pepo (Zucchini)cgybcpeB686
CsGy5G000530Cucurbita pepo (Zucchini)cgybcpeB704
CsGy5G000530Cucumber (Chinese Long) v2cgybcuB206
CsGy5G000530Bottle gourd (USVL1VR-Ls)cgyblsiB294
CsGy5G000530Bottle gourd (USVL1VR-Ls)cgyblsiB343
CsGy5G000530Bottle gourd (USVL1VR-Ls)cgyblsiB345
CsGy5G000530Melon (DHL92) v3.5.1cgybmeB298
CsGy5G000530Melon (DHL92) v3.5.1cgybmeB349
CsGy5G000530Melon (DHL92) v3.5.1cgybmeB354
CsGy5G000530Melon (DHL92) v3.6.1cgybmedB298
CsGy5G000530Melon (DHL92) v3.6.1cgybmedB349
CsGy5G000530Melon (DHL92) v3.6.1cgybmedB355
CsGy5G000530Melon (DHL92) v3.6.1cgybmedB356
CsGy5G000530Watermelon (Charleston Gray)cgybwcgB332
CsGy5G000530Watermelon (Charleston Gray)cgybwcgB357
CsGy5G000530Watermelon (Charleston Gray)cgybwcgB361
CsGy5G000530Watermelon (97103) v1cgybwmB379
CsGy5G000530Watermelon (97103) v1cgybwmB381
CsGy5G000530Watermelon (97103) v1cgybwmB373