CsGy5G000380 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTGCCGTTGCCGCTCACTCCATTAATTACTAAATAGTAATACTACTCTTCTTCACATCATCACACATTACAATATCATCCTTTTCCTCTCTATTTTTCCCTTCCCCACACTAATAATAATAACTAACAAAGAAAAAGAAAAAGAAAAGTAGTGTTGTTGTTGTTATTAATTAGTATTCCCAATCCCCCCAATGGGGAAGAAAGGAGGAGGCAGCAGCAGTTGGTTCTTTGCTGTCAGGAAGGCCTTCAAACCTTCTCCTCCTCAACATACTCAGGTATTCCTTTCTTTCTTTCATTTTACTTCACACATATAAACAACTATCAAACTTCTTCTTTCTCGTACTTTCATCTCCGTTCCTTCCTCCATAACTTGAGCTTAGTACCATTATCTTTTGTCATTTCGATAATCTAGAAATGTTTTATTTATTCTATCTTCATTTCGATTAGTTAATAAATATAAGCTCTCAAAAGAGTAATACGAACAAGTGTATGTCAATTATGGTTAAGTTATGCTCGCTTTATCATGTTTTTATATATTCTATTGTTGAAATTCATCAACTAAATAAAATTATGTATTTTTTCTTTTATTTAATTGAAGGTAGTTTAGTTTAGTTTTAAGAAACTTTTCAGTATGAAATTTGTTTTTAAACTTGGAAAATAAATTAATTAAAAATGATTAGAAATTTTTGTAGGAATTGGACAATAAAATTGGTTATTTAAACTAAGAAAAATAGCATTGTGCAGAAATGTGAAGAAGAGGGTCCTGAAGTTGTGTCGTTTAAGCATTTTCCAGCAGTTAAAAGTTCTTGTGAGAGCACCAATTCTACACCATTAACAAATACTGATAGATCAAACCATGCCATTGTGGTGGCTGCCGCCACTGCAGCAGCGGCTGAGGCTGCAGTGGTAGCAGCTGAAGCGGCAGCAAAGGTTGTTCAGTTGGCTGGATATAGCCGCTTATACTCCAAGGAAGAAAGAGCTGCAACTATTATTCAATCTTGGTATAGAGGTCACTTGGTAATTATAATTAACTCTTTCATTCATTTCTTAGAACGGTTTCTTCCCTTTAAAGAAATTAATCTCTCAACATCGTTACCAACCAATTATTTAACTCACAAAACCTTTCTATTTATTTCTTATAAAAGCAATGGAAGATTGAAAATAATTTTCATCTTTCATTGAGAATATGTATTTGTACTAGTGCTTTTTTTTCGTAATAATTAATCGTCACTTCTTTAACATCTTTTTCACTAAATAAGAGTCTTCATTTAACATCAAAATTCACTATTTGGTAATTACTTTTATGCTCCACTCCATACATTTTAATTAGCAATTTTCTTATGTAGGCTCGATGTGCATTGCGTGCATTAAAAGGTTTGGTAAGGCTACAAGCATTGGTACGAGGCTACAACGTACGCAAACAAGCACAAATGACAATGCGATGCATGCAAGCTTTAGTTCGTGTCCAAACTCGAGTTCGAGCACGGAGGCTTCAACTAACGCACGACAAGTTTCAAAGAAAAATCGAGGAGGTCGAAGAAGAAGAAAAACTAAAAAAGAAATATGAAAAATTGATGGCTTCCCATAGAAGAAGTGAAATGGTAACACAAAATAGAGAGAAAAATAGAAAACAGCTTTCTTCAAAGAAGCACGAACCGGGTCAATTTTATGAAGGCGGAAACCGGCGTACAACACAATGGGGTTGGAGTTCGCTGGACCGCTGGATGCCTTCTCAACCTTCCCATGCTCATGACGACATGTCGGAGAAGACCGTCGAAATGAACTTGGACTCTGGCCAGGGCCAGGGCCATGTTCCGAGCTATATGGCCCCAACTAAGTCGGCTAAGGCCAAGGCCCGGAATACGAGTGGAGTTAAACAACTGAGCCCACTATTGAGCCCATCAACGAGGAAAAGTTGGGCTCCTGAGTCATCGAGTTCGACTGTTAACCAGGCTCAATATGGCCCAATAAACAAAAGTAATGGGAGAAATACCCAATTACATGGTAGTTGTATTACGTGGCACGACCCAGATTACTATGGTGGTGAGGAGTGGACCTTTCCTCTTGGAGCCCATGGTTGGAGTTGAATTGGTAAAAGTAGGCCCATTGATATTTGTTTGCTCTTGAGTGATTTCATAAAAAATGTAACATAAAGTGTTTCCTTTGCACATCCTTGCATGTTTGAGGTTGATAAAACGTTAATTAATTATCATTGTAAAAATACATAAATTTGTATCTTATCTCTGTAATACCTAAACTCAAATTAATGCATTTTATGATGTTTATCAAATAAAAATAAATTATTGGTATAGCATAA CTTGCCGTTGCCGCTCACTCCATTAATTACTAAATAGTAATACTACTCTTCTTCACATCATCACACATTACAATATCATCCTTTTCCTCTCTATTTTTCCCTTCCCCACACTAATAATAATAACTAACAAAGAAAAAGAAAAAGAAAAGTAGTGTTGTTGTTGTTATTAATTAGTATTCCCAATCCCCCCAATGGGGAAGAAAGGAGGAGGCAGCAGCAGTTGGTTCTTTGCTGTCAGGAAGGCCTTCAAACCTTCTCCTCCTCAACATACTCAGAAATGTGAAGAAGAGGGTCCTGAAGTTGTGTCGTTTAAGCATTTTCCAGCAGTTAAAAGTTCTTGTGAGAGCACCAATTCTACACCATTAACAAATACTGATAGATCAAACCATGCCATTGTGGTGGCTGCCGCCACTGCAGCAGCGGCTGAGGCTGCAGTGGTAGCAGCTGAAGCGGCAGCAAAGGTTGTTCAGTTGGCTGGATATAGCCGCTTATACTCCAAGGAAGAAAGAGCTGCAACTATTATTCAATCTTGGTATAGAGGTCACTTGGCTCGATGTGCATTGCGTGCATTAAAAGGTTTGGTAAGGCTACAAGCATTGGTACGAGGCTACAACGTACGCAAACAAGCACAAATGACAATGCGATGCATGCAAGCTTTAGTTCGTGTCCAAACTCGAGTTCGAGCACGGAGGCTTCAACTAACGCACGACAAGTTTCAAAGAAAAATCGAGGAGGTCGAAGAAGAAGAAAAACTAAAAAAGAAATATGAAAAATTGATGGCTTCCCATAGAAGAAGTGAAATGGTAACACAAAATAGAGAGAAAAATAGAAAACAGCTTTCTTCAAAGAAGCACGAACCGGGTCAATTTTATGAAGGCGGAAACCGGCGTACAACACAATGGGGTTGGAGTTCGCTGGACCGCTGGATGCCTTCTCAACCTTCCCATGCTCATGACGACATGTCGGAGAAGACCGTCGAAATGAACTTGGACTCTGGCCAGGGCCAGGGCCATGTTCCGAGCTATATGGCCCCAACTAAGTCGGCTAAGGCCAAGGCCCGGAATACGAGTGGAGTTAAACAACTGAGCCCACTATTGAGCCCATCAACGAGGAAAAGTTGGGCTCCTGAGTCATCGAGTTCGACTGTTAACCAGGCTCAATATGGCCCAATAAACAAAAGTAATGGGAGAAATACCCAATTACATGGTAGTTGTATTACGTGGCACGACCCAGATTACTATGGTGGTGAGGAGTGGACCTTTCCTCTTGGAGCCCATGGTTGGAGTTGAATTGGTAAAAGTAGGCCCATTGATATTTGTTTGCTCTTGAGTGATTTCATAAAAAATGTAACATAAAGTGTTTCCTTTGCACATCCTTGCATGTTTGAGGTTGATAAAACGTTAATTAATTATCATTGTAAAAATACATAAATTTGTATCTTATCTCTGTAATACCTAAACTCAAATTAATGCATTTTATGATGTTTATCAAATAAAAATAAATTATTGGTATAGCATAA ATGGGGAAGAAAGGAGGAGGCAGCAGCAGTTGGTTCTTTGCTGTCAGGAAGGCCTTCAAACCTTCTCCTCCTCAACATACTCAGAAATGTGAAGAAGAGGGTCCTGAAGTTGTGTCGTTTAAGCATTTTCCAGCAGTTAAAAGTTCTTGTGAGAGCACCAATTCTACACCATTAACAAATACTGATAGATCAAACCATGCCATTGTGGTGGCTGCCGCCACTGCAGCAGCGGCTGAGGCTGCAGTGGTAGCAGCTGAAGCGGCAGCAAAGGTTGTTCAGTTGGCTGGATATAGCCGCTTATACTCCAAGGAAGAAAGAGCTGCAACTATTATTCAATCTTGGTATAGAGGTCACTTGGCTCGATGTGCATTGCGTGCATTAAAAGGTTTGGTAAGGCTACAAGCATTGGTACGAGGCTACAACGTACGCAAACAAGCACAAATGACAATGCGATGCATGCAAGCTTTAGTTCGTGTCCAAACTCGAGTTCGAGCACGGAGGCTTCAACTAACGCACGACAAGTTTCAAAGAAAAATCGAGGAGGTCGAAGAAGAAGAAAAACTAAAAAAGAAATATGAAAAATTGATGGCTTCCCATAGAAGAAGTGAAATGGTAACACAAAATAGAGAGAAAAATAGAAAACAGCTTTCTTCAAAGAAGCACGAACCGGGTCAATTTTATGAAGGCGGAAACCGGCGTACAACACAATGGGGTTGGAGTTCGCTGGACCGCTGGATGCCTTCTCAACCTTCCCATGCTCATGACGACATGTCGGAGAAGACCGTCGAAATGAACTTGGACTCTGGCCAGGGCCAGGGCCATGTTCCGAGCTATATGGCCCCAACTAAGTCGGCTAAGGCCAAGGCCCGGAATACGAGTGGAGTTAAACAACTGAGCCCACTATTGAGCCCATCAACGAGGAAAAGTTGGGCTCCTGAGTCATCGAGTTCGACTGTTAACCAGGCTCAATATGGCCCAATAAACAAAAGTAATGGGAGAAATACCCAATTACATGGTAGTTGTATTACGTGGCACGACCCAGATTACTATGGTGGTGAGGAGTGGACCTTTCCTCTTGGAGCCCATGGTTGGAGTTGA MGKKGGGSSSWFFAVRKAFKPSPPQHTQKCEEEGPEVVSFKHFPAVKSSCESTNSTPLTNTDRSNHAIVVAAATAAAAEAAVVAAEAAAKVVQLAGYSRLYSKEERAATIIQSWYRGHLARCALRALKGLVRLQALVRGYNVRKQAQMTMRCMQALVRVQTRVRARRLQLTHDKFQRKIEEVEEEEKLKKKYEKLMASHRRSEMVTQNREKNRKQLSSKKHEPGQFYEGGNRRTTQWGWSSLDRWMPSQPSHAHDDMSEKTVEMNLDSGQGQGHVPSYMAPTKSAKAKARNTSGVKQLSPLLSPSTRKSWAPESSSSTVNQAQYGPINKSNGRNTQLHGSCITWHDPDYYGGEEWTFPLGAHGWS
BLAST of CsGy5G000380 vs. NCBI nr
Match: XP_004145987.2 (PREDICTED: protein IQ-DOMAIN 1-like [Cucumis sativus] >KGN49861.1 hypothetical protein Csa_5G139390 [Cucumis sativus]) HSP 1 Score: 618.6 bits (1594), Expect = 1.3e-173 Identity = 365/365 (100.00%), Postives = 365/365 (100.00%), Query Frame = 0
BLAST of CsGy5G000380 vs. NCBI nr
Match: XP_008437606.1 (PREDICTED: protein IQ-DOMAIN 1-like [Cucumis melo]) HSP 1 Score: 491.9 bits (1265), Expect = 1.9e-135 Identity = 322/377 (85.41%), Postives = 331/377 (87.80%), Query Frame = 0
BLAST of CsGy5G000380 vs. NCBI nr
Match: XP_022158006.1 (protein IQ-DOMAIN 1-like [Momordica charantia]) HSP 1 Score: 371.3 bits (952), Expect = 3.7e-99 Identity = 265/381 (69.55%), Postives = 287/381 (75.33%), Query Frame = 0
BLAST of CsGy5G000380 vs. NCBI nr
Match: XP_022995987.1 (protein IQ-DOMAIN 1-like [Cucurbita maxima]) HSP 1 Score: 328.2 bits (840), Expect = 3.6e-86 Identity = 241/368 (65.49%), Postives = 263/368 (71.47%), Query Frame = 0
BLAST of CsGy5G000380 vs. NCBI nr
Match: XP_023533969.1 (protein IQ-DOMAIN 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 318.2 bits (814), Expect = 3.7e-83 Identity = 244/369 (66.12%), Postives = 260/369 (70.46%), Query Frame = 0
BLAST of CsGy5G000380 vs. TAIR10
Match: AT3G49260.3 (IQ-domain 21) HSP 1 Score: 111.7 bits (278), Expect = 9.7e-25 Identity = 174/450 (38.67%), Postives = 213/450 (47.33%), Query Frame = 0
BLAST of CsGy5G000380 vs. TAIR10
Match: AT1G01110.2 (IQ-domain 18) HSP 1 Score: 72.4 bits (176), Expect = 6.5e-13 Identity = 64/192 (33.33%), Postives = 84/192 (43.75%), Query Frame = 0
BLAST of CsGy5G000380 vs. TAIR10
Match: AT4G00820.1 (IQ-domain 17) HSP 1 Score: 69.7 bits (169), Expect = 4.2e-12 Identity = 65/203 (32.02%), Postives = 91/203 (44.83%), Query Frame = 0
BLAST of CsGy5G000380 vs. TAIR10
Match: AT5G03040.1 (IQ-domain 2) HSP 1 Score: 57.0 bits (136), Expect = 2.8e-08 Identity = 81/331 (24.47%), Postives = 128/331 (38.67%), Query Frame = 0
BLAST of CsGy5G000380 vs. TAIR10
Match: AT4G10640.1 (IQ-domain 16) HSP 1 Score: 55.8 bits (133), Expect = 6.3e-08 Identity = 29/40 (72.50%), Postives = 35/40 (87.50%), Query Frame = 0
BLAST of CsGy5G000380 vs. Swiss-Prot
Match: sp|Q8L4D8|IQD31_ARATH (Protein IQ-DOMAIN 31 OS=Arabidopsis thaliana OX=3702 GN=IQD31 PE=1 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 9.6e-06 Identity = 26/44 (59.09%), Postives = 36/44 (81.82%), Query Frame = 0
BLAST of CsGy5G000380 vs. TrEMBL
Match: tr|A0A0A0KQ58|A0A0A0KQ58_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139390 PE=4 SV=1) HSP 1 Score: 618.6 bits (1594), Expect = 8.9e-174 Identity = 365/365 (100.00%), Postives = 365/365 (100.00%), Query Frame = 0
BLAST of CsGy5G000380 vs. TrEMBL
Match: tr|A0A1S3AV06|A0A1S3AV06_CUCME (protein IQ-DOMAIN 1-like OS=Cucumis melo OX=3656 GN=LOC103482968 PE=4 SV=1) HSP 1 Score: 491.9 bits (1265), Expect = 1.3e-135 Identity = 322/377 (85.41%), Postives = 331/377 (87.80%), Query Frame = 0
BLAST of CsGy5G000380 vs. TrEMBL
Match: tr|A0A2P4KVU7|A0A2P4KVU7_QUESU (Protein iq-domain 1 OS=Quercus suber OX=58331 GN=CFP56_19992 PE=4 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.8e-42 Identity = 209/458 (45.63%), Postives = 252/458 (55.02%), Query Frame = 0
BLAST of CsGy5G000380 vs. TrEMBL
Match: tr|A0A2I4EZA6|A0A2I4EZA6_9ROSI (protein IQ-DOMAIN 1 isoform X2 OS=Juglans regia OX=51240 GN=LOC108994096 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 3.4e-40 Identity = 202/459 (44.01%), Postives = 241/459 (52.51%), Query Frame = 0
BLAST of CsGy5G000380 vs. TrEMBL
Match: tr|A0A2I4EZA9|A0A2I4EZA9_9ROSI (protein IQ-DOMAIN 1 isoform X1 OS=Juglans regia OX=51240 GN=LOC108994096 PE=4 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 5.8e-40 Identity = 202/461 (43.82%), Postives = 241/461 (52.28%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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