CsGy5G000270 (gene) Cucumber (Gy14) v2

Overview
NameCsGy5G000270
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr5 : 149925 .. 150530 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTTGGACCGCTCAGTCCATGCCCATGATTGAGCATCGATTTTCAACTTCTTTGACTATATCTATATTTCTGCTAAAACACAACCTTCCCCAATATTGGTCTGTAGAACATATCACCTTTGAAGTTTGCTGATATGATAACTGCTTGCACATTCTAAGTTCAAACCTTCAGAGGCAGAGAGCATCTGTTTGATTTTCCCATGAGAAATGGTGTTAACGAAGATTTAAGCTGGTGGCTATATGAGTTTTGACTAGTTATGTTATTTATCCTGATTTCTCACTAGTTTTAGTTTTTTTAACCAAACCTCGACTATTGGCATTCATTGTGAGAACTCCTGCAGAGTTTTAGTTCACACTGATATGAAGATGATGCTATAAATATAAAGATGATATGGTTTTATCCAAGTGCATATGCTAGAGACTGAATTCAGATGTGGGATGCACAGCTGCAGTTTTCATGAACAAGGAAGAATTGAAATTTGCTTACTGCAGATGCCAAAAGCTGCAATGCAGTTCATTAGCTAACGAAGACGGAGTTGAAGATGACCCCAAACACTGGCTTTTGTGTTATGGTACTCCCTTTTCTGCTTTCAAGCAGAGTTGA

mRNA sequence

ATGCCTTGGACCGCTCAGTCCATGCCCATGATTGAGCATCGATTTTCAACTTCTTTGACTATATCTATATTTCTGCTAAAACACAACCTTCCCCAATATTGGTCTGTAGAACATATCACCTTTGAAAGACTGAATTCAGATGTGGGATGCACAGCTGCAGTTTTCATGAACAAGGAAGAATTGAAATTTGCTTACTGCAGATGCCAAAAGCTGCAATGCAGTTCATTAGCTAACGAAGACGGAGTTGAAGATGACCCCAAACACTGGCTTTTGTGTTATGGTACTCCCTTTTCTGCTTTCAAGCAGAGTTGA

Coding sequence (CDS)

ATGCCTTGGACCGCTCAGTCCATGCCCATGATTGAGCATCGATTTTCAACTTCTTTGACTATATCTATATTTCTGCTAAAACACAACCTTCCCCAATATTGGTCTGTAGAACATATCACCTTTGAAAGACTGAATTCAGATGTGGGATGCACAGCTGCAGTTTTCATGAACAAGGAAGAATTGAAATTTGCTTACTGCAGATGCCAAAAGCTGCAATGCAGTTCATTAGCTAACGAAGACGGAGTTGAAGATGACCCCAAACACTGGCTTTTGTGTTATGGTACTCCCTTTTCTGCTTTCAAGCAGAGTTGA

Protein sequence

MPWTAQSMPMIEHRFSTSLTISIFLLKHNLPQYWSVEHITFERLNSDVGCTAAVFMNKEELKFAYCRCQKLQCSSLANEDGVEDDPKHWLLCYGTPFSAFKQS
Homology
[Close]
BLAST of CsGy5G000270 vs. NCBI nr
Match: KGN49845.1 (hypothetical protein Csa_5G139230 [Cucumis sativus])

HSP 1 Score: 225.3 bits (573), Expect = 9.3e-56
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MPWTAQSMPMIEHRFSTSLTISIFLLKHNLPQYWSVEHITFERLNSDVGCTAAVFMNKEE 60
           MPWTAQSMPMIEHRFSTSLTISIFLLKHNLPQYWSVEHITFERLNSDVGCTAAVFMNKEE
Sbjct: 1   MPWTAQSMPMIEHRFSTSLTISIFLLKHNLPQYWSVEHITFERLNSDVGCTAAVFMNKEE 60

Query: 61  LKFAYCRCQKLQCSSLANEDGVEDDPKHWLLCYGTPFSAFKQS 104
           LKFAYCRCQKLQCSSLANEDGVEDDPKHWLLCYGTPFSAFKQS
Sbjct: 61  LKFAYCRCQKLQCSSLANEDGVEDDPKHWLLCYGTPFSAFKQS 103

[Close]
BLAST of CsGy5G000270 vs. TrEMBL
Match: tr|A0A0A0KJE3|A0A0A0KJE3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139230 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 6.2e-56
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MPWTAQSMPMIEHRFSTSLTISIFLLKHNLPQYWSVEHITFERLNSDVGCTAAVFMNKEE 60
           MPWTAQSMPMIEHRFSTSLTISIFLLKHNLPQYWSVEHITFERLNSDVGCTAAVFMNKEE
Sbjct: 1   MPWTAQSMPMIEHRFSTSLTISIFLLKHNLPQYWSVEHITFERLNSDVGCTAAVFMNKEE 60

Query: 61  LKFAYCRCQKLQCSSLANEDGVEDDPKHWLLCYGTPFSAFKQS 104
           LKFAYCRCQKLQCSSLANEDGVEDDPKHWLLCYGTPFSAFKQS
Sbjct: 61  LKFAYCRCQKLQCSSLANEDGVEDDPKHWLLCYGTPFSAFKQS 103

The following BLAST results are available for this feature:
BLAST of CsGy5G000270 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN49845.19.3e-56100.00hypothetical protein Csa_5G139230 [Cucumis sativus][more]
BLAST of CsGy5G000270 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy5G000270 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy5G000270 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KJE3|A0A0A0KJE3_CUCSA6.2e-56100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139230 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G000270.1CsGy5G000270.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy5G000270Csa5G139230Cucumber (Chinese Long) v2cgybcuB224
CsGy5G000270ClCG01G000260Watermelon (Charleston Gray)cgybwcgB332
CsGy5G000270CsaV3_5G000320Cucumber (Chinese Long) v3cgybcucB232
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy5G000270Cucurbita pepo (Zucchini)cgybcpeB583
CsGy5G000270Cucurbita pepo (Zucchini)cgybcpeB607
CsGy5G000270Cucurbita pepo (Zucchini)cgybcpeB610
CsGy5G000270Cucurbita pepo (Zucchini)cgybcpeB617
CsGy5G000270Cucurbita pepo (Zucchini)cgybcpeB686
CsGy5G000270Cucumber (Chinese Long) v2cgybcuB206
CsGy5G000270Cucumber (Chinese Long) v2cgybcuB208
CsGy5G000270Bottle gourd (USVL1VR-Ls)cgyblsiB294
CsGy5G000270Bottle gourd (USVL1VR-Ls)cgyblsiB305
CsGy5G000270Bottle gourd (USVL1VR-Ls)cgyblsiB343
CsGy5G000270Bottle gourd (USVL1VR-Ls)cgyblsiB345
CsGy5G000270Melon (DHL92) v3.5.1cgybmeB298
CsGy5G000270Melon (DHL92) v3.5.1cgybmeB354
CsGy5G000270Melon (DHL92) v3.6.1cgybmedB298
CsGy5G000270Melon (DHL92) v3.6.1cgybmedB349
CsGy5G000270Melon (DHL92) v3.6.1cgybmedB356
CsGy5G000270Watermelon (Charleston Gray)cgybwcgB344
CsGy5G000270Watermelon (Charleston Gray)cgybwcgB361
CsGy5G000270Watermelon (97103) v1cgybwmB379
CsGy5G000270Watermelon (97103) v1cgybwmB381
CsGy5G000270Watermelon (97103) v1cgybwmB373
CsGy5G000270Watermelon (97103) v1cgybwmB393
CsGy5G000270Wild cucumber (PI 183967)cgybcpiB210
CsGy5G000270Wild cucumber (PI 183967)cgybcpiB226
CsGy5G000270Silver-seed gourdcarcgybB0288
CsGy5G000270Silver-seed gourdcarcgybB0513
CsGy5G000270Silver-seed gourdcarcgybB0514
CsGy5G000270Silver-seed gourdcarcgybB0546
CsGy5G000270Silver-seed gourdcarcgybB0578
CsGy5G000270Silver-seed gourdcarcgybB0978
CsGy5G000270Cucumber (Chinese Long) v3cgybcucB211
CsGy5G000270Cucumber (Chinese Long) v3cgybcucB213
CsGy5G000270Watermelon (97103) v2cgybwmbB319
CsGy5G000270Watermelon (97103) v2cgybwmbB330
CsGy5G000270Watermelon (97103) v2cgybwmbB366
CsGy5G000270Wax gourdcgybwgoB423
CsGy5G000270Wax gourdcgybwgoB430
CsGy5G000270Wax gourdcgybwgoB457
CsGy5G000270Cucumber (Gy14) v2cgybcgybB085
CsGy5G000270Cucumber (Gy14) v2cgybcgybB088
CsGy5G000270Cucurbita maxima (Rimu)cgybcmaB602
CsGy5G000270Cucurbita maxima (Rimu)cgybcmaB628
CsGy5G000270Cucurbita maxima (Rimu)cgybcmaB618
CsGy5G000270Cucurbita maxima (Rimu)cgybcmaB639
CsGy5G000270Cucurbita maxima (Rimu)cgybcmaB644
CsGy5G000270Cucurbita moschata (Rifu)cgybcmoB575
CsGy5G000270Cucurbita moschata (Rifu)cgybcmoB594
CsGy5G000270Cucurbita moschata (Rifu)cgybcmoB607
CsGy5G000270Cucurbita moschata (Rifu)cgybcmoB616
CsGy5G000270Cucurbita moschata (Rifu)cgybcmoB618