CsGy4G024550 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGAGATTGAAAGCACTGGAAGCATTGAGAAGATCTTCATTTCAAAGTTCATTTTCTAACCTGAAGAGAAGCTTCTCTGCTCTGCCAAACTATGCTCAAACCGATGATCTTTCCGACCAGGTTCGTTCGTGTTCGGAGTTCTTTTTTTAGTTTGTTAACAAGTAATCAGACGCGGAAATGCGTCTCGTTCTATCTGTTTTTCTCTCCTAAACTTGATTCATCTTCGGAGGAGCTTACTGAGCAGGTACTGGTTTTGTTCTGAAGAGGTGTTTATGTGATACTTAGGTTATGGTGGAAGGAAAACCGAATTCAAGAGCAGCTATCCTCAATAGACCATCAGCTCTCAATGCTCTCACTACTTCTATGGTTCTTTTCTATGATTCTTTGATTCTTTTCTGTGTTTTGAGATTAACTTGCTGTATTGTTTGGTTCACAATTACCTACTCGTTGGACATATTCTAACACGAGATGTATTTGTTGTAGGTAGCCCGGCTGAACAGGCTTTATGAGTCGTGGGAGGAAAATTCTAGTATCGGATTCGTTTTAATGAAGGTGTGAACTGTTTTGTGCGTAAATTCACTGATGCTCAAATGTTGAACACTTTCTCCGATTTAGTTTTTATATTTCCACTGTCAGAAACGTCTTAGTTTATATGGAAGCTGTTGTAAGTTTAGCTAGTGTTTTATCACTCGGACTTGTTCTATCTCCCGTATCTTACAATATTATTTTCTTTGAAGGGTAGCGGCAGGGCCTTTTGCTCCGGTGCAGATGTTGTCGCGCTTTATAATTTATCAAATGAAGGTTAGTGGTCTTCCGATGTTTCAAATGGAACTTTGCTAACTAATAATTGGCATTGGTTGAGGCATTCATATGATCATGTAATTTTGTAGGATTCAGTTTCGCTATTAAGTATTGTGAATCTGTTAAGGCATAAATTGGCTTTGACATTGCTTGTTTTATGTTAATGTCGTTGTTGTCCGTGCCTTACCATTCTCATTATGAATGGCAAATACTATCAGTTTCTACGCGGAATTATATGATTGTTATTATAGCAAATTTTTTAATATAAAACAAATGTATTGAAATGGATAAAAATGCAAATGGAGATGAGAGAGGACTGCAAATTAAGACCAATATCATATTAGGGAAATCGTGAAAGCTTTCTTTAACTTGTCAAAAGTAAGAAAGAAAACTGTCAGTATTAGCAACAATGTTTGAGGTTGGAGACCTAAGTTGATCTAATTCCTATTCCAAGAAAAAGAATGCAGAGGAAAACCTCCTTATTGTTTTGGCTTTTACTTTGGGGAAACTATATTAGCGACTAGAGAGAAAAGATTCTGGAAGGACGGAGGGAAGGAAAAGTTGAACTCAATAATTATCCCCTGATATGGTAAGAAACTTCACAATAAGTCTTTAATGCTCTCCCCTCACAATTACATGTCAAACACTTTTGAGTACCAAGGTTTATTCAAGCAATCTAAAGGAATTAAGTGGAATGGAATCACATTAAAACATTAAAATTTCCTGATGGCCTTTATTTCTTTGGACTCAGAATTCATTATTATCACATTTTTTATTTTTTAGAAAAAGAAAATAGTGACTTACGGACCAGTTTGGTTAGATGAAATTTTTTATTAGACGTTCTTAAACTTAGTGAAATAGACAGTGTCTCACTATGGAAATCTTTCCCATAGTTGGTCCAACATTTGGACAATAATCCACGTTCATTTTTTTTATTGTTTTCATGCTTGTAACAACATAGGAAAAAATTGAAAAGGAAGGAAAAAAAAGAAACTACACTAACAGCCTAGCAGATTTTCTTCATCTTACATCTAGTGTACGGTGCTAATTTGATCCTTTTTGCTTTTGGGCACAGGGAATATTGAAGACTGCAAGAAGTTTTTTGAGACATTATACAAATTTGTATATCTTCAAGGAACTTACTTGAAGCCACATGTGAGTAACTTCATAGCCTCTTGAAATATTCCGTACTGTGATTGACTAAAGAGAGCTTATCAGTGCTTTATGATTTTTTCTCTGGTCTTAGAGTTACTGACTTACTGTTGAGGTTAAAGAGAGTCTCTTCAGTATCCAATTTATGATTTTTTTTCCTGTCTTCATTTTGTTTGCATATGTATTTAAGTACGAAATCTACAATGCCTATAAAACTTTGTAGCCTGTAATTATTGTTTTATCAGGTGGCGCTGTTGGATGGCATCATGATGGGAGCTGGGGCAGGGATTGTCCTTCCAGGATTGTTCAGATTGGTGACTAATAAAACTGTAAGTGAATACAGGTGCAATAAGTGCAATCATCTCTTTGTGATGCAGTTCTATCAGGATACTTAAATGACTCTTATTTGACATTGTCACATTGCTCATTATATATATGTATAACATGATATTTGAATAAATAAATTCAAGTATTTGAAAATGGAGAAATTTAATAAAACTAAGATGACTGTCTTAAAATGTTTGATAGCTAAACAAGAAATGAACTACTTCTCATTCATCGAAAATTGTTTGAGGGAATGATCTTCTAAAGCCATAGAAATGAAAGAAAGGAAAGTGCAAAGGTACTGTTTAAATCTAAAAGTTGCATATCCCATGAACGTGTTTATCTGAGTGTATGATATCTTATGAATGGGATAGATAGATACCTATAACCTTTCTGCACAGATTTCACAACTCCTATTTGTAAAAATCGCCAGGAATATACCCATTGATATCGCACCCTTCTGTTCAGGTTTTTTCTCATCCTGAGGTTCAAATGGGTTTCCATCCTGACGCCGGAGCTTCCTTCTACCTTTCTCGTCTTCCTGGCTACTTAGGTAGTGTATATATTTGTTATTCAAGTCTTGCACCATTTTTGAAATTGTGACCCCCCACCCACACACCCACACCCACACCCACAAAAATAATAATGAAAAAATAAATATATAGACCTGATCATTACACAGTAAATTAATTATTCATATTTAATTTGTTTTAAAAGTTGAGCACATGGTGCAATGTTGGATTCCTCAAATTAGTTCAATTGGAAGAATAGAGCATATATGATTGACTCCGAAGTAAATTCCTTATATTGGGCACAATGCCAATCCATTTTTCAAGAACTGGATAAATCCTAGAGATTTAAGATCCCCGAATCTGTTTCACTGATGAAGATTTCTCATGGCTGGCTTCCCTTGATGCGTATAAGAATGACAAAAAAATATGAAGGAAAAATGAACATCATCATTGTGGTACATCTATTTTTTTAAGTGAAAGTTTTGTTGGGATCAGATGGCAATAATTGTATACTCGATCAAGTAATACATCCCAAAGCAATGTATTTAATTGCATAATCTTCTCTGCTATTCCTTATTTTTATTTATTGTTATTATTTTTTAGTACAAATGGGATGGGGGATTTGAACCACGGACATCTTGGTCCTTAGCACATATTGATGTCTGTTGAAGTAGACTCTTTCTTGCTATGCTATCCCTTAATTGAATCATATATGGTATTCCCTAAATTTAATTGCAAGAAGCTTGTTTGGTTTGAAAAACAGTTTATTTTCTTACACAATTTTCTTCCTTGCAGGTGAGTATTTAGCTCTAACTGGTGATAAACTCAATGGGGTGGAGATGATTGCCTGTGGCCTTGCTACACACTATTCGCTCACTGCAGTTTGTTTTCCGTTCCTTCATCCTTCTTTTGATTTCTTACTCTCATTCATTCACAGCCTGTAATGATAAATATATGATCCTGGCAGAGAATTGCTGGGATTGATGAACGCCTTGGTAAAATGATAACTGATGACCCTTCTGTCATAGAATCAACTCTTGCTGCATATGGTGATCTTGTTTATCCTGATAGGAGGAGTGTTCTTTACAAGTAATATTCTTCTCTTACATCTTTCCTCTTTGTGTAGATTATAAGTCCTAGCTCCTATGGATGTTAATACGAAAAAAATTGCATGAAGTTGATTTTACTTTTGAGAATTTGTACTTACCCAACGTATTAGAAGTAGTGGATGCTACAAGAACCCTTGGCTGAGTTAAATACTGAACCTCGTCATAAAGCATCAACTAGCAGTGGGATTAATTAACCGTGGGATAGAATTCACCTTTCATCACACACACAAGTGATTGTGGTTTATTATTGAATGCTGATGATTAAGTGTTCTTGTCTTCTAGACTCTTAATCATTTTCCAAACCTTTCTTTTTCCCCAGGCTCGATGCAATTGACAAGTGTTTTTGCCATGACACTGTCGAGGAAATTTTGGAAGCCTTGGTAAGCATTGTATTCTATTTCTAAATCTTCAAGCTAAGTAGCAAGAGCACTTTACTTTAGTTTGGCCAGTGTGTCCATGTCGGGCACTCCAACACTCCAACTCTTGTTGGACATATATCACACTTTTTAGTGTAACAAATCTATTAGACATACATTGTTATATAACCAAAAAAAAGGAAAAAGACATACCTAAGATACTTTTTGAGTAGTCTAAAATCTCATATATACAACAATAATAATTTAATTTGTGGTATTAAAATTATATATATTTTTGAACAGAAATATTTTAATAAGCATGTTCTTGTGTCCTAGATTTTTAAAGATGACGGGTGACTGTGTCCATGTCATGTTCTATGCATGTTGTGCTTCTTAGGCTTTAAGATTTTTAGTAGAATTCATGGACTAACCAAAGTGTATAAGTCGCTGACCTTTACTAAGAATAAAAAGCTCGTGAGGCGCATAAACCAAGTCAAGTTCCAAACCGAAACATTTCTTCATTCTAGAAATCACGATGGTAATTTACTGAAGTATTGTTTGTATCCACACGTCAGGAAAAAGAGGCCGCAGAGTCTTATGATGAATGGTATTCTACCACACTGAAGTTACTTGGAGAAGCTTCGCCATTGAGCCTGAAAGTTACATTAAGATCTGTGAGTTCCTTTTCTACTTTTTCATCTTTCATTTTTATTTTTCGTTTACTCTCGTGTTACTCACTCGGGATGAATACATTTAACTCCTCGATCCTTATTTTATCCCATTGTAATTATAGATCCGTGAAGGTAGGTTTCAAAGTCTCGACCAATGTCTTGCTCGTGAATACAGGATATCCCTCAATGGAATTTTAAAGCACGCATCTCCCGACTTCCACGAGGTAATTAGACTTCCAAATTTGTTTGGACAGTTCAAATTCGCAATACAACACCTTACATTTTGTATGCATTAATAGGGTGTTCGATCGCGGCTGGTGGATAAAGACTTCGCTCCCAAG ATGCAGAGATTGAAAGCACTGGAAGCATTGAGAAGATCTTCATTTCAAAGTTCATTTTCTAACCTGAAGAGAAGCTTCTCTGCTCTGCCAAACTATGCTCAAACCGATGATCTTTCCGACCAGACGCGGAAATGCGTCTCGTTCTATCTGTTTTTCTCTCCTAAACTTGATTCATCTTCGGAGGAGCTTACTGAGCAGGTAGCCCGGCTGAACAGGCTTTATGAGTCGTGGGAGGAAAATTCTAGTATCGGATTCGTTTTAATGAAGGGTAGCGGCAGGGCCTTTTGCTCCGGTGCAGATGTTGTCGCGCTTTATAATTTATCAAATGAAGAAAAAGAAAATAGTGACTTACGGACCAGTTTGGTGGCGCTGTTGGATGGCATCATGATGGGAGCTGGGGCAGGGATTGTCCTTCCAGGATTGTTCAGATTGGTGACTAATAAAACTATCCGTGAAGGTAGGTTTCAAAGTCTCGACCAATGTCTTGCTCGTGAATACAGGATATCCCTCAATGGAATTTTAAAGCACGCATCTCCCGACTTCCACGAGGGTGTTCGATCGCGGCTGGTGGATAAAGACTTCGCTCCCAAG ATGCAGAGATTGAAAGCACTGGAAGCATTGAGAAGATCTTCATTTCAAAGTTCATTTTCTAACCTGAAGAGAAGCTTCTCTGCTCTGCCAAACTATGCTCAAACCGATGATCTTTCCGACCAGACGCGGAAATGCGTCTCGTTCTATCTGTTTTTCTCTCCTAAACTTGATTCATCTTCGGAGGAGCTTACTGAGCAGGTAGCCCGGCTGAACAGGCTTTATGAGTCGTGGGAGGAAAATTCTAGTATCGGATTCGTTTTAATGAAGGGTAGCGGCAGGGCCTTTTGCTCCGGTGCAGATGTTGTCGCGCTTTATAATTTATCAAATGAAGAAAAAGAAAATAGTGACTTACGGACCAGTTTGGTGGCGCTGTTGGATGGCATCATGATGGGAGCTGGGGCAGGGATTGTCCTTCCAGGATTGTTCAGATTGGTGACTAATAAAACTATCCGTGAAGGTAGGTTTCAAAGTCTCGACCAATGTCTTGCTCGTGAATACAGGATATCCCTCAATGGAATTTTAAAGCACGCATCTCCCGACTTCCACGAGGGTGTTCGATCGCGGCTGGTGGATAAAGACTTCGCTCCCAAG MQRLKALEALRRSSFQSSFSNLKRSFSALPNYAQTDDLSDQTRKCVSFYLFFSPKLDSSSEELTEQVARLNRLYESWEENSSIGFVLMKGSGRAFCSGADVVALYNLSNEEKENSDLRTSLVALLDGIMMGAGAGIVLPGLFRLVTNKTIREGRFQSLDQCLAREYRISLNGILKHASPDFHEGVRSRLVDKDFAPK
BLAST of CsGy4G024550 vs. NCBI nr
Match: XP_004145499.1 (PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial [Cucumis sativus] >KGN55428.1 hypothetical protein Csa_4G651940 [Cucumis sativus]) HSP 1 Score: 227.6 bits (579), Expect = 3.6e-56 Identity = 165/368 (44.84%), Postives = 172/368 (46.74%), Query Frame = 0
BLAST of CsGy4G024550 vs. NCBI nr
Match: XP_008452850.1 (PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial [Cucumis melo] >XP_016901310.1 PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial [Cucumis melo]) HSP 1 Score: 206.8 bits (525), Expect = 6.6e-50 Identity = 156/371 (42.05%), Postives = 166/371 (44.74%), Query Frame = 0
BLAST of CsGy4G024550 vs. NCBI nr
Match: XP_023524232.1 (3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial [Cucurbita pepo subsp. pepo]) HSP 1 Score: 187.6 bits (475), Expect = 4.1e-44 Identity = 145/371 (39.08%), Postives = 164/371 (44.20%), Query Frame = 0
BLAST of CsGy4G024550 vs. NCBI nr
Match: XP_022940265.1 (3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial [Cucurbita moschata]) HSP 1 Score: 186.0 bits (471), Expect = 1.2e-43 Identity = 144/371 (38.81%), Postives = 164/371 (44.20%), Query Frame = 0
BLAST of CsGy4G024550 vs. NCBI nr
Match: XP_022981840.1 (3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial [Cucurbita maxima]) HSP 1 Score: 184.5 bits (467), Expect = 3.5e-43 Identity = 143/370 (38.65%), Postives = 162/370 (43.78%), Query Frame = 0
BLAST of CsGy4G024550 vs. TAIR10
Match: AT4G31810.1 (ATP-dependent caseinolytic (Clp) protease/crotonase family protein) HSP 1 Score: 113.6 bits (283), Expect = 1.4e-25 Identity = 109/370 (29.46%), Postives = 135/370 (36.49%), Query Frame = 0
BLAST of CsGy4G024550 vs. TAIR10
Match: AT3G60510.3 (ATP-dependent caseinolytic (Clp) protease/crotonase family protein) HSP 1 Score: 86.7 bits (213), Expect = 1.8e-17 Identity = 43/98 (43.88%), Postives = 65/98 (66.33%), Query Frame = 0
HSP 2 Score: 71.6 bits (174), Expect = 6.0e-13 Identity = 33/53 (62.26%), Postives = 42/53 (79.25%), Query Frame = 0
BLAST of CsGy4G024550 vs. TAIR10
Match: AT5G65940.1 (beta-hydroxyisobutyryl-CoA hydrolase 1) HSP 1 Score: 63.5 bits (153), Expect = 1.6e-10 Identity = 36/100 (36.00%), Postives = 59/100 (59.00%), Query Frame = 0
HSP 2 Score: 54.3 bits (129), Expect = 9.9e-08 Identity = 26/53 (49.06%), Postives = 35/53 (66.04%), Query Frame = 0
BLAST of CsGy4G024550 vs. TAIR10
Match: AT2G30660.1 (ATP-dependent caseinolytic (Clp) protease/crotonase family protein) HSP 1 Score: 61.2 bits (147), Expect = 8.1e-10 Identity = 34/100 (34.00%), Postives = 57/100 (57.00%), Query Frame = 0
HSP 2 Score: 49.7 bits (117), Expect = 2.4e-06 Identity = 23/53 (43.40%), Postives = 33/53 (62.26%), Query Frame = 0
BLAST of CsGy4G024550 vs. TAIR10
Match: AT1G06550.1 (ATP-dependent caseinolytic (Clp) protease/crotonase family protein) HSP 1 Score: 60.1 bits (144), Expect = 1.8e-09 Identity = 25/50 (50.00%), Postives = 38/50 (76.00%), Query Frame = 0
HSP 2 Score: 56.2 bits (134), Expect = 2.6e-08 Identity = 33/102 (32.35%), Postives = 55/102 (53.92%), Query Frame = 0
BLAST of CsGy4G024550 vs. Swiss-Prot
Match: sp|Q8RXN4|HIBC5_ARATH (3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g31810 PE=1 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 2.5e-24 Identity = 109/370 (29.46%), Postives = 135/370 (36.49%), Query Frame = 0
BLAST of CsGy4G024550 vs. Swiss-Prot
Match: sp|Q5XF59|HIBC4_ARATH (3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g60510 PE=1 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 3.2e-16 Identity = 43/98 (43.88%), Postives = 65/98 (66.33%), Query Frame = 0
HSP 2 Score: 71.6 bits (174), Expect = 1.1e-11 Identity = 33/53 (62.26%), Postives = 42/53 (79.25%), Query Frame = 0
BLAST of CsGy4G024550 vs. Swiss-Prot
Match: sp|Q9LKJ1|HIBC1_ARATH (3-hydroxyisobutyryl-CoA hydrolase 1 OS=Arabidopsis thaliana OX=3702 GN=CHY1 PE=1 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 2.9e-09 Identity = 36/100 (36.00%), Postives = 59/100 (59.00%), Query Frame = 0
HSP 2 Score: 54.3 bits (129), Expect = 1.8e-06 Identity = 26/53 (49.06%), Postives = 35/53 (66.04%), Query Frame = 0
BLAST of CsGy4G024550 vs. Swiss-Prot
Match: sp|Q6NMB0|HIBC3_ARATH (Probable 3-hydroxyisobutyryl-CoA hydrolase 3 OS=Arabidopsis thaliana OX=3702 GN=At2g30660 PE=2 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.5e-08 Identity = 34/100 (34.00%), Postives = 57/100 (57.00%), Query Frame = 0
HSP 2 Score: 49.7 bits (117), Expect = 4.4e-05 Identity = 23/53 (43.40%), Postives = 33/53 (62.26%), Query Frame = 0
BLAST of CsGy4G024550 vs. Swiss-Prot
Match: sp|Q9SHJ8|HIBC8_ARATH (3-hydroxyisobutyryl-CoA hydrolase-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=At1g06550 PE=1 SV=2) HSP 1 Score: 60.1 bits (144), Expect = 3.2e-08 Identity = 25/50 (50.00%), Postives = 38/50 (76.00%), Query Frame = 0
BLAST of CsGy4G024550 vs. TrEMBL
Match: tr|A0A0A0L124|A0A0A0L124_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G651940 PE=3 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 2.4e-56 Identity = 165/368 (44.84%), Postives = 172/368 (46.74%), Query Frame = 0
BLAST of CsGy4G024550 vs. TrEMBL
Match: tr|A0A1S3BVM5|A0A1S3BVM5_CUCME (3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103493749 PE=3 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 4.3e-50 Identity = 156/371 (42.05%), Postives = 166/371 (44.74%), Query Frame = 0
BLAST of CsGy4G024550 vs. TrEMBL
Match: tr|A0A251RA42|A0A251RA42_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G393600 PE=3 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 7.7e-31 Identity = 126/369 (34.15%), Postives = 146/369 (39.57%), Query Frame = 0
BLAST of CsGy4G024550 vs. TrEMBL
Match: tr|A0A2I4G6R0|A0A2I4G6R0_9ROSI (3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial OS=Juglans regia OX=51240 GN=LOC109005217 PE=3 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 1.0e-30 Identity = 126/372 (33.87%), Postives = 142/372 (38.17%), Query Frame = 0
BLAST of CsGy4G024550 vs. TrEMBL
Match: tr|M5XEQ7|M5XEQ7_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G393600 PE=3 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 1.3e-30 Identity = 126/371 (33.96%), Postives = 146/371 (39.35%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |