CsGy4G020920 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy4G020920
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	senescence-related gene 1
Location	Chr4 : 27651319 .. 27651985 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAATGGAAACGCAGAAATTGTTCCAACTTCCGATTGAAGAGAAGGAAAAGCTATGGCAGATAGAAGGAGATGTAGAAGGATTTGGACAAGCTTTCGTTAGAAGTAAAGAACAGAAATTGGATTGGTGCGATATTTTCTTCATCGCTACATCGCCTTTACATTTCAGGAAAACCCCGGTTATTTCAAAATCTTCCTCTCTCTTTGAGGTTGGATAATTCCTTCCATTGCAAAACTTTTAAAGTGATTCTCAAACTCATAAAACTCCTAGAAATTGAACTCTGGACTCATAAACAAATGTTGATTAGTTTAATTAATATTGAAAAAGAATTAGGAAATGATTATGAAACTGTATTGGTATGCAGAGAGACATTGGAGGAGTACTCGGCGGCGGTGAAGGATGTGACGGCGGCGATATTTGGTGGAGTTGAGAAAGCGTTGGGGATAAAAGAGGGAGAGTTGAGTGAGTTGTTCAAGGAGGGTAATCAATCGATGAGAATGAACTATTACCCACCCTGCCCGGAGCCAGAGAAGGTGATCGGACTGACGCCTCATTCCGACCCCGTTGGACTCACGATTCTGCTCCAAATCAACGAAGAAGAAGGTCTGAAGATTAAGAAAGACGGGAATTCGATTACCGTTATACCCCTCCCAAATGCTTCATAG

mRNA sequence

ATGAAAATGGAAACGCAGAAATTGTTCCAACTTCCGATTGAAGAGAAGGAAAAGCTATGGCAGATAGAAGGAGATGTAGAAGGATTTGGACAAGCTTTCGTTAGAAGTAAAGAACAGAAATTGGATTGAGAGACATTGGAGGAGTACTCGGCGGCGGTGAAGGATGTGACGGCGGCGATATTTGGTGGAGTTGAGAAAGCGTTGGGGATAAAAGAGGGAGAGTTGAGTGAGTTGTTCAAGGAGGGTAATCAATCGATGAGAATGAACTATTACCCACCCTGCCCGGAGCCAGAGAAGGTGATCGGACTGACGCCTCATTCCGACCCCGTTGGACTCACGATTCTGCTCCAAATCAACGAAGAAGAAGGTCTGAAGATTAAGAAAGACGGGAATTCGATTACCGTTATACCCCTCCCAAATGCTTCATAG

Coding sequence (CDS)

ATGAGAATGAACTATTACCCACCCTGCCCGGAGCCAGAGAAGGTGATCGGACTGACGCCTCATTCCGACCCCGTTGGACTCACGATTCTGCTCCAAATCAACGAAGAAGAAGGTCTGAAGATTAAGAAAGACGGGAATTCGATTACCGTTATACCCCTCCCAAATGCTTCATAG

Protein sequence

MRMNYYPPCPEPEKVIGLTPHSDPVGLTILLQINEEEGLKIKKDGNSITVIPLPNAS

Homology

[Close]

BLAST of CsGy4G020920 vs. NCBI nr
Match: KGN55022.1 (hypothetical protein Csa_4G622810 [Cucumis sativus])

HSP 1 Score: 120.6 bits (301), Expect = 1.8e-24
Identity = 56/57 (98.25%), Postives = 56/57 (98.25%), Query Frame = 0


Query: 1   MRMNYYPPCPEPEKVIGLTPHSDPVGLTILLQINEEEGLKIKKDGNSITVIPLPNAS 58
           MRMNYYPPCPEPEKVIGLTPHSDPVGLTILLQINE EGLKIKKDGNSITVIPLPNAS
Sbjct: 54  MRMNYYPPCPEPEKVIGLTPHSDPVGLTILLQINEVEGLKIKKDGNSITVIPLPNAS 110

[Close]

BLAST of CsGy4G020920 vs. NCBI nr
Match: XP_011654407.1 (PREDICTED: protein SRG1-like [Cucumis sativus])

HSP 1 Score: 120.6 bits (301), Expect = 1.8e-24
Identity = 56/57 (98.25%), Postives = 56/57 (98.25%), Query Frame = 0


Query: 1   MRMNYYPPCPEPEKVIGLTPHSDPVGLTILLQINEEEGLKIKKDGNSITVIPLPNAS 58
           MRMNYYPPCPEPEKVIGLTPHSDPVGLTILLQINE EGLKIKKDGNSITVIPLPNAS
Sbjct: 114 MRMNYYPPCPEPEKVIGLTPHSDPVGLTILLQINEVEGLKIKKDGNSITVIPLPNAS 170

[Close]

BLAST of CsGy4G020920 vs. NCBI nr
Match: XP_022935942.1 (protein SRG1-like [Cucurbita moschata])

HSP 1 Score: 109.0 bits (271), Expect = 5.4e-21
Identity = 50/56 (89.29%), Postives = 51/56 (91.07%), Query Frame = 0


Query: 1   MRMNYYPPCPEPEKVIGLTPHSDPVGLTILLQINEEEGLKIKKDGNSITVIPLPNA 57
           MRMNYYPPCPEPEKVIGLTPHSD VGLTILLQINE EGLKIKKDGN + V PLPNA
Sbjct: 210 MRMNYYPPCPEPEKVIGLTPHSDAVGLTILLQINEMEGLKIKKDGNWVAVTPLPNA 265

[Close]

BLAST of CsGy4G020920 vs. NCBI nr
Match: XP_023534939.1 (protein SRG1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 109.0 bits (271), Expect = 5.4e-21
Identity = 50/56 (89.29%), Postives = 51/56 (91.07%), Query Frame = 0


Query: 1   MRMNYYPPCPEPEKVIGLTPHSDPVGLTILLQINEEEGLKIKKDGNSITVIPLPNA 57
           MRMNYYPPCPEPEKVIGLTPHSD VGLTILLQINE EGLKIKKDGN + V PLPNA
Sbjct: 210 MRMNYYPPCPEPEKVIGLTPHSDAVGLTILLQINEMEGLKIKKDGNWVAVTPLPNA 265

[Close]

BLAST of CsGy4G020920 vs. NCBI nr
Match: XP_008463796.1 (PREDICTED: probable 2-oxoglutarate/Fe(II)-dependent dioxygenase [Cucumis melo])

HSP 1 Score: 107.5 bits (267), Expect = 1.6e-20
Identity = 49/56 (87.50%), Postives = 52/56 (92.86%), Query Frame = 0


Query: 1   MRMNYYPPCPEPEKVIGLTPHSDPVGLTILLQINEEEGLKIKKDGNSITVIPLPNA 57
           MRMNYYPPCPEPEKVIGLTPHSD  GLTILLQIN+ EGLKIKK+GN ITV+PLPNA
Sbjct: 211 MRMNYYPPCPEPEKVIGLTPHSDAAGLTILLQINKVEGLKIKKEGNWITVMPLPNA 266

[Close]

BLAST of CsGy4G020920 vs. TAIR10
Match: AT4G25310.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein)

HSP 1 Score: 98.6 bits (244), Expect = 1.3e-21
Identity = 43/56 (76.79%), Postives = 49/56 (87.50%), Query Frame = 0


Query: 1   MRMNYYPPCPEPEKVIGLTPHSDPVGLTILLQINEEEGLKIKKDGNSITVIPLPNA 57
           +RMNYYPPCPEP+K IGLTPHSD  GLTILLQ+NE EGL+IKKDG  ++V PLPNA
Sbjct: 208 IRMNYYPPCPEPDKAIGLTPHSDATGLTILLQVNEVEGLQIKKDGKWVSVKPLPNA 263

[Close]

BLAST of CsGy4G020920 vs. TAIR10
Match: AT1G17020.1 (senescence-related gene 1)

HSP 1 Score: 97.4 bits (241), Expect = 2.9e-21
Identity = 41/56 (73.21%), Postives = 50/56 (89.29%), Query Frame = 0


Query: 1   MRMNYYPPCPEPEKVIGLTPHSDPVGLTILLQINEEEGLKIKKDGNSITVIPLPNA 57
           MRMNYYPPCP+P++VIGLTPHSD VGLT+L+Q+N+ EGL+IKKDG  + V PLPNA
Sbjct: 213 MRMNYYPPCPQPDQVIGLTPHSDSVGLTVLMQVNDVEGLQIKKDGKWVPVKPLPNA 268

[Close]

BLAST of CsGy4G020920 vs. TAIR10
Match: AT4G25300.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein)

HSP 1 Score: 89.7 bits (221), Expect = 6.1e-19
Identity = 40/56 (71.43%), Postives = 47/56 (83.93%), Query Frame = 0


Query: 1   MRMNYYPPCPEPEKVIGLTPHSDPVGLTILLQINEEEGLKIKKDGNSITVIPLPNA 57
           +R+NYYP CPEP+KVIGLTPHSD  GLTILLQ NE EGL+IKK+   ++V PLPNA
Sbjct: 211 IRLNYYPRCPEPDKVIGLTPHSDSTGLTILLQANEVEGLQIKKNAKWVSVKPLPNA 266

[Close]

BLAST of CsGy4G020920 vs. TAIR10
Match: AT1G17010.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein)

HSP 1 Score: 85.9 bits (211), Expect = 8.9e-18
Identity = 39/56 (69.64%), Postives = 44/56 (78.57%), Query Frame = 0


Query: 1   MRMNYYPPCPEPEKVIGLTPHSDPVGLTILLQINEEEGLKIKKDGNSITVIPLPNA 57
           MRMNYYPPCP+P  V GL PHSD VGLTILLQ+NE +GL+IKK+G    V PL NA
Sbjct: 213 MRMNYYPPCPQPNLVTGLIPHSDAVGLTILLQVNEVDGLQIKKNGKWFFVKPLQNA 268

[Close]

BLAST of CsGy4G020920 vs. TAIR10
Match: AT1G78550.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein)

HSP 1 Score: 83.6 bits (205), Expect = 4.4e-17
Identity = 35/56 (62.50%), Postives = 47/56 (83.93%), Query Frame = 0


Query: 1   MRMNYYPPCPEPEKVIGLTPHSDPVGLTILLQINEEEGLKIKKDGNSITVIPLPNA 57
           +++NYYPPCP+P++V+GLT HSD  GLTILLQ+N+ EGL+IKKDG  + V PL +A
Sbjct: 211 IKINYYPPCPQPDQVMGLTQHSDAAGLTILLQVNQVEGLQIKKDGKWVVVKPLRDA 266

[Close]

BLAST of CsGy4G020920 vs. Swiss-Prot
Match: sp|Q39224|SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana OX=3702 GN=SRG1 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 5.3e-20
Identity = 41/56 (73.21%), Postives = 50/56 (89.29%), Query Frame = 0


Query: 1   MRMNYYPPCPEPEKVIGLTPHSDPVGLTILLQINEEEGLKIKKDGNSITVIPLPNA 57
           MRMNYYPPCP+P++VIGLTPHSD VGLT+L+Q+N+ EGL+IKKDG  + V PLPNA
Sbjct: 213 MRMNYYPPCPQPDQVIGLTPHSDSVGLTVLMQVNDVEGLQIKKDGKWVPVKPLPNA 268

[Close]

BLAST of CsGy4G020920 vs. Swiss-Prot
Match: sp|D4N501|DIOX2_PAPSO (Probable 2-oxoglutarate/Fe(II)-dependent dioxygenase OS=Papaver somniferum OX=3469 GN=DIOX2 PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 2.9e-18
Identity = 42/56 (75.00%), Postives = 47/56 (83.93%), Query Frame = 0


Query: 1   MRMNYYPPCPEPEKVIGLTPHSDPVGLTILLQINEEEGLKIKKDGNSITVIPLPNA 57
           MRMNYYPPCP+PE  IGLTPHSD  GLTILLQ+NE EGL+IK +G  I+V PLPNA
Sbjct: 218 MRMNYYPPCPQPELAIGLTPHSDFGGLTILLQLNEVEGLQIKNEGRWISVKPLPNA 273

[Close]

BLAST of CsGy4G020920 vs. Swiss-Prot
Match: sp|D4N500|DIOX1_PAPSO (Thebaine 6-O-demethylase OS=Papaver somniferum OX=3469 GN=T6ODM PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 3.2e-17
Identity = 41/56 (73.21%), Postives = 46/56 (82.14%), Query Frame = 0


Query: 1   MRMNYYPPCPEPEKVIGLTPHSDPVGLTILLQINEEEGLKIKKDGNSITVIPLPNA 57
           MRMNYYPPCP+P   IGLT HSD  GLTILLQINE EGL+IK++G  I+V PLPNA
Sbjct: 218 MRMNYYPPCPQPNLAIGLTSHSDFGGLTILLQINEVEGLQIKREGTWISVKPLPNA 273

[Close]

BLAST of CsGy4G020920 vs. Swiss-Prot
Match: sp|D4N502|DIOX3_PAPSO (Codeine O-demethylase OS=Papaver somniferum OX=3469 GN=CODM PE=1 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 4.6e-16
Identity = 38/56 (67.86%), Postives = 46/56 (82.14%), Query Frame = 0


Query: 1   MRMNYYPPCPEPEKVIGLTPHSDPVGLTILLQINEEEGLKIKKDGNSITVIPLPNA 57
           MRMNYYPPCP PE V+GLT HSD  GLTILLQ+NE EGL+I+K+   I++ PLP+A
Sbjct: 215 MRMNYYPPCPRPELVLGLTSHSDFSGLTILLQLNEVEGLQIRKEERWISIKPLPDA 270

[Close]

BLAST of CsGy4G020920 vs. Swiss-Prot
Match: sp|Q9FFF6|DIOX5_ARATH (Probable 2-oxoglutarate-dependent dioxygenase At5g05600 OS=Arabidopsis thaliana OX=3702 GN=At5g05600 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 2.4e-12
Identity = 31/56 (55.36%), Postives = 42/56 (75.00%), Query Frame = 0


Query: 1   MRMNYYPPCPEPEKVIGLTPHSDPVGLTILLQINEEEGLKIKKDGNSITVIPLPNA 57
           +R+NYYP CP PE  +GL+PHSDP G+TILL  ++  GL+++KD   ITV P P+A
Sbjct: 224 LRVNYYPKCPRPELALGLSPHSDPGGMTILLPDDQVFGLQVRKDDTWITVKPHPHA 279

[Close]

BLAST of CsGy4G020920 vs. TrEMBL
Match: tr|A0A0A0L372|A0A0A0L372_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G622810 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.2e-24
Identity = 56/57 (98.25%), Postives = 56/57 (98.25%), Query Frame = 0


Query: 1   MRMNYYPPCPEPEKVIGLTPHSDPVGLTILLQINEEEGLKIKKDGNSITVIPLPNAS 58
           MRMNYYPPCPEPEKVIGLTPHSDPVGLTILLQINE EGLKIKKDGNSITVIPLPNAS
Sbjct: 54  MRMNYYPPCPEPEKVIGLTPHSDPVGLTILLQINEVEGLKIKKDGNSITVIPLPNAS 110

[Close]

BLAST of CsGy4G020920 vs. TrEMBL
Match: tr|A0A1S3CK11|A0A1S3CK11_CUCME (probable 2-oxoglutarate/Fe(II)-dependent dioxygenase OS=Cucumis melo OX=3656 GN=LOC103501850 PE=3 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.0e-20
Identity = 49/56 (87.50%), Postives = 52/56 (92.86%), Query Frame = 0


Query: 1   MRMNYYPPCPEPEKVIGLTPHSDPVGLTILLQINEEEGLKIKKDGNSITVIPLPNA 57
           MRMNYYPPCPEPEKVIGLTPHSD  GLTILLQIN+ EGLKIKK+GN ITV+PLPNA
Sbjct: 211 MRMNYYPPCPEPEKVIGLTPHSDAAGLTILLQINKVEGLKIKKEGNWITVMPLPNA 266

[Close]

BLAST of CsGy4G020920 vs. TrEMBL
Match: tr|A0A0A0KZZ7|A0A0A0KZZ7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G622820 PE=3 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 3.9e-20
Identity = 49/56 (87.50%), Postives = 52/56 (92.86%), Query Frame = 0


Query: 1   MRMNYYPPCPEPEKVIGLTPHSDPVGLTILLQINEEEGLKIKKDGNSITVIPLPNA 57
           MR+NYYP CPEPEKVIGLTPHSD VGLTILLQINE EGLKIKK+GN ITV+PLPNA
Sbjct: 54  MRINYYPRCPEPEKVIGLTPHSDSVGLTILLQINEVEGLKIKKEGNWITVMPLPNA 109

[Close]

BLAST of CsGy4G020920 vs. TrEMBL
Match: tr|A0A1S3CK25|A0A1S3CK25_CUCME (probable 2-oxoglutarate/Fe(II)-dependent dioxygenase OS=Cucumis melo OX=3656 GN=LOC103501866 PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 5.1e-20
Identity = 48/56 (85.71%), Postives = 51/56 (91.07%), Query Frame = 0


Query: 1   MRMNYYPPCPEPEKVIGLTPHSDPVGLTILLQINEEEGLKIKKDGNSITVIPLPNA 57
           MRMNYYPPCPEPEKVIGL PHSD VGLTILLQIN+ EGLKIKK+GN I V+PLPNA
Sbjct: 94  MRMNYYPPCPEPEKVIGLAPHSDSVGLTILLQINKVEGLKIKKEGNWINVMPLPNA 149

[Close]

BLAST of CsGy4G020920 vs. TrEMBL
Match: tr|A0A2G5CFM3|A0A2G5CFM3_AQUCA (Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_05700023v1 PE=3 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 3.3e-19
Identity = 46/56 (82.14%), Postives = 50/56 (89.29%), Query Frame = 0


Query: 1   MRMNYYPPCPEPEKVIGLTPHSDPVGLTILLQINEEEGLKIKKDGNSITVIPLPNA 57
           MRMNYYPPCP+PEKVIGLTPHSD VGLTILLQINE EGL++KKDG  I + PLPNA
Sbjct: 211 MRMNYYPPCPQPEKVIGLTPHSDAVGLTILLQINEMEGLQVKKDGKWIPIKPLPNA 266

The following BLAST results are available for this feature:

BLAST of CsGy4G020920 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN55022.1	1.8e-24	98.25	hypothetical protein Csa_4G622810 [Cucumis sativus]	[more]
XP_011654407.1	1.8e-24	98.25	PREDICTED: protein SRG1-like [Cucumis sativus]	[more]
XP_022935942.1	5.4e-21	89.29	protein SRG1-like [Cucurbita moschata]	[more]
XP_023534939.1	5.4e-21	89.29	protein SRG1-like [Cucurbita pepo subsp. pepo]	[more]
XP_008463796.1	1.6e-20	87.50	PREDICTED: probable 2-oxoglutarate/Fe(II)-dependent dioxygenase [Cucumis melo]	[more]

BLAST of CsGy4G020920 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G25310.1	1.3e-21	76.79	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[more]
AT1G17020.1	2.9e-21	73.21	senescence-related gene 1	[more]
AT4G25300.1	6.1e-19	71.43	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[more]
AT1G17010.1	8.9e-18	69.64	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[more]
AT1G78550.1	4.4e-17	62.50	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[more]

BLAST of CsGy4G020920 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q39224\|SRG1_ARATH	5.3e-20	73.21	Protein SRG1 OS=Arabidopsis thaliana OX=3702 GN=SRG1 PE=2 SV=1	[more]
sp\|D4N501\|DIOX2_PAPSO	2.9e-18	75.00	Probable 2-oxoglutarate/Fe(II)-dependent dioxygenase OS=Papaver somniferum OX=34...	[more]
sp\|D4N500\|DIOX1_PAPSO	3.2e-17	73.21	Thebaine 6-O-demethylase OS=Papaver somniferum OX=3469 GN=T6ODM PE=1 SV=1	[more]
sp\|D4N502\|DIOX3_PAPSO	4.6e-16	67.86	Codeine O-demethylase OS=Papaver somniferum OX=3469 GN=CODM PE=1 SV=1	[more]
sp\|Q9FFF6\|DIOX5_ARATH	2.4e-12	55.36	Probable 2-oxoglutarate-dependent dioxygenase At5g05600 OS=Arabidopsis thaliana ...	[more]

BLAST of CsGy4G020920 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L372\|A0A0A0L372_CUCSA	1.2e-24	98.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G622810 PE=4 SV=1	[more]
tr\|A0A1S3CK11\|A0A1S3CK11_CUCME	1.0e-20	87.50	probable 2-oxoglutarate/Fe(II)-dependent dioxygenase OS=Cucumis melo OX=3656 GN=...	[more]
tr\|A0A0A0KZZ7\|A0A0A0KZZ7_CUCSA	3.9e-20	87.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G622820 PE=3 SV=1	[more]
tr\|A0A1S3CK25\|A0A1S3CK25_CUCME	5.1e-20	85.71	probable 2-oxoglutarate/Fe(II)-dependent dioxygenase OS=Cucumis melo OX=3656 GN=...	[more]
tr\|A0A2G5CFM3\|A0A2G5CFM3_AQUCA	3.3e-19	82.14	Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_05700023v1 PE=3...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016491	oxidoreductase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

Vocabulary: **INTERPRO**
Term	Definition
IPR005123	Oxoglu/Fe-dep_dioxygenase
IPR027443	IPNS-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0051213	dioxygenase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016491	oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G020920.1	CsGy4G020920.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027443	Isopenicillin N synthase-like	GENE3D	G3DSA:2.60.120.330		coord: 1..57 e-value: 1.9E-18 score: 68.8
IPR005123	Oxoglutarate/iron-dependent dioxygenase	PFAM	PF03171	2OG-FeII_Oxy	coord: 1..55 e-value: 3.0E-11 score: 43.6
None	No IPR available	PANTHER	PTHR10209	OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN	coord: 1..56
None	No IPR available	PANTHER	PTHR10209:SF168	2-OXOGLUTARATE 2OG AND FE II -DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED	coord: 1..56
None	No IPR available	SUPERFAMILY	SSF51197	Clavaminate synthase-like	coord: 1..56

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy4G020920	Csa4G622810	Cucumber (Chinese Long) v2	cgybcuB166
CsGy4G020920	CSPI04G22420	Wild cucumber (PI 183967)	cgybcpiB169
CsGy4G020920	MELO3C025677.2	Melon (DHL92) v3.6.1	cgybmedB252
CsGy4G020920	CsaV3_4G032760	Cucumber (Chinese Long) v3	cgybcucB171
CsGy4G020920	Cla97C11G223150	Watermelon (97103) v2	cgybwmbB265
CsGy4G020920	Bhi09G002918	Wax gourd	cgybwgoB398
CsGy4G020920	Carg03084	Silver-seed gourd	carcgybB0634

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy4G020920	Cucurbita maxima (Rimu)	cgybcmaB470
CsGy4G020920	Cucurbita maxima (Rimu)	cgybcmaB515
CsGy4G020920	Cucurbita moschata (Rifu)	cgybcmoB437
CsGy4G020920	Cucurbita moschata (Rifu)	cgybcmoB484
CsGy4G020920	Cucurbita pepo (Zucchini)	cgybcpeB540
CsGy4G020920	Cucurbita pepo (Zucchini)	cgybcpeB566
CsGy4G020920	Bottle gourd (USVL1VR-Ls)	cgyblsiB263
CsGy4G020920	Watermelon (Charleston Gray)	cgybwcgB259
CsGy4G020920	Watermelon (97103) v1	cgybwmB326
CsGy4G020920	Silver-seed gourd	carcgybB0323
CsGy4G020920	Watermelon (97103) v2	cgybwmbB269