CsGy4G020700 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTTTGTTTGATTCGCAATAATTCGGAACTTTGAAAAAGCTCAATCATAGATCCCACATACACCCACAGACATTCACACACTAATCTCTCTTTGAGTAGAAACCAAGCAACATTTAAAGTTGCCCAATTCTCCATTTTCTTCATCTTCCTCCTCTCTCAAGCAAGAATCTATCCCCCATTTTTTTTTGTTACAGACCAACCAAAGGTTTACGCTTTCTATGTCTTCTCCATTCCATTACACTCACACTCACTCTCACTCTCACTCTCACTCTCATTCTCATTCTCATTCTACTCCTTCAATTTCATTCATCACCCAAAACGAATCATCCTTTATTCCCTTTTCTCCCACCTTTGCCCACCTAGTGTTTGTATAAATGCCCCTTGGAGATGGACATGTTTGGAGTGCTCATTGAGCTATGGAGAGATTTTGTGTTCTCCTACTTTACTTCTCTTTCGCATTTTCACCCACTGTTCTGGCTATTCCTAGTGGTAAGGAATTCAATTATGTTTTTGTATTCTTTTAACTGGGGTGTCTGTTTTTATTATTATTGTTGTTGTTGTTGTAAGTTTTTCACGAGAGCTCTCTTTTGCAGACGATGGTTTTTACTCCAGAAAGTTCAAATTTGAGATTCATGGACATGGACTTAGTAGAAGTTCCACCTATGAGTCGTCCTTGAAGAAGCTGAAACTACAAATTCAAAAGAGGTTCATTTCAAAACCCCAACTTAAATTCTTAGTCGATCAACCAAATGCTGTCACTGTTAACTCTCCATTCTCATTGCCTCCTTTTGATTCACTTGGACCAACTCCATTGCCCATCAACTCTCCTCCTTTCTGTGAAGACTCACCACCCCAAACTCCTCGATCATCTTCGTCGCCGTCGCCTCCACCACCACCACCTGGGATGATCTATTCCCACACGCCGCCTCCTCCGCTGTCTGGGATGATCTATTCCCACGCTCCACCTCCACCACCACCAGGGTTTCAGCCTAGTGTTCCAAGCAGAAGCCAAAGCCCTCCACCAGGCTCACCCAGCATCTTCCCCATAACGCCAATTGGCCCCTTGGCCCCAAATCCTCCAGCTAACATATCCAGCCCCACCCCACCAATTGGGCTTCCAAGCCCACCTCACCATTATGGGCCACCGAGCCCACCAAAACATGGTTATGGGCCACCGAGCCCACCAGTGTTTCTGCCACCAATGGTGTATCCACCGCCGGCTGGTCCACCTCCGGCAGGAGGGCATGGGGGGAAGCCAGGGTCGAGTGGTGCAGCATGGTGTGTGGCTAAGCCAACAGTGCCTGATCCAATAATTCAAGTGGCTATGGATTATGCTTGTGGGTCAGGAGCTGACTGCAAGTCCATTCAACCTAATGGACATTGTTATGAACCTAATACTGTATTGGCACACGCCTCATATGCTTTTAATAGCTACTGGCAGAACAACAAGGTGAGTGGTGGAACCTGTGATTTTGGAGGGACTGCCATGATTGTAACTGTGGATCCAAGTAAGTTCACTACTTTCCCCCTACTTGATCTTTTCAAATTGCACACTACCACAACTAAACTAAAAACTAGAAACCAACAAGTTGAGCATACCATTGATGAAGTTTTGTTACCATTGATGAAGTTTTGTTTGGTATCCATATGATTTTAAAATTAAATACAATTTTATTCCAATTTCTTATCCCGATTGTATATTTCTTTTGGTCATTTTTAGACAAATTTCAAAAACAAAAACAACTTTCATATTGTTTTTTAAAAAATAGAAAACAAAATCAGTTACCAAACTTTTAATAAACAAAAATTAAAAAAAACAAAATACAATCAATTGAAATAGCTATGAAACAAGGTTTTAGTTTTTCAGATCTAGTTAAGATATGAGGAATGTTTAGTTGGTAATCTCGACTATGTTTTGTGTTTTTGGCAAACAATCTCAATTTTGTTTTTAAAACTATGATGGATGATGTGATTCAAACTATTCAAATTGAAAAAATAACTTCTTTTTTTTATATATTTTCAATACACATATTTTAAATTATAATATCAAGTAGGAAAATTTTTAAAAATAACAAATTTTACAAAATATCGACAACCTATAACAAATTATATCACTGATATACCATAGTGATAGAAGACTATCATTGATAGAAGACTATCATTGATAGAATCCAAAACTTTATTTTGTTATTTTTAAAAAATGTCTCTATCATATATAATAATTTTTTAAATTAGAATCAGATTCCTCTATCTATTACCAAACACATATTTGAAAACATGAAATACATATGTGTTTTTATTATGAAAGTTTTTAAAAATAGTAGATTTTACAAAATATTTACAATTTATAGCAAATTCTATCACTGATAATGATTGATATGTTGATATGCTATAGTGATAGAAAACTAAATTTTGCTATAGTTGGTAAATATTTTAATTTATTTTTATTTTTTTATACTACCTATCAAACATATACTAAATATCTCTTTTATGAAAATAAGAAAAAAACAAAAAAGTTTCGTGCCTAAATCTTGAATTTTAATCTCTTTTATGAAAATAAGAAAAAAACAAAAAAGATCCGTGCCTAAATCTTGAATTTTAAACTCTTCCAAATTGTATTTATAAATGCATCAAATTTGTAAAGGCTTTAAATCAACACTTGATGTCCAAACACTAACAAGAGTTTAGGTCAATTGGCATTTATACCTATCTAAGCATAAATGTCATGAGTTCAAATCATCCACCCCAATTTGTACTAATTCAAATATCTAACTAGGTTTTTAAAAACAAAACAAAAAAATTGTTAAGTACAATGATAAGCCAAAGCAAGCATAGTTAAGAGGGAACAAGGATAAGGAAAGTTTGAATTCTCTAACTCGAATGAAAATTAACTTAATTTTAAAATACTAAAGACGAGAAAATGAGGTTGTTACCAAAATGGACTTAACGTTACACAATTAAGCACATGAGAGTGATTTTGATCTTGACTCAAAAGACTTCCAAAACTATTCGCAAACATGTCCTTGATGTCGGCCTAGAACAAGATTACTTATAGGTCATTTTCATTAAATCGTATAGACCTTTTGATTATGATGAAAATGTGTAACATTAATTGGATGAGAGTGACTTTGATTGTGGCAGGTTTTGAAGGGTGTAAGTTCGTCCTCGGTTGA GTTTGTTTGATTCGCAATAATTCGGAACTTTGAAAAAGCTCAATCATAGATCCCACATACACCCACAGACATTCACACACTAATCTCTCTTTGAGTAGAAACCAAGCAACATTTAAAGTTGCCCAATTCTCCATTTTCTTCATCTTCCTCCTCTCTCAAGCAAGAATCTATCCCCCATTTTTTTTTGTTACAGACCAACCAAAGGTTTACGCTTTCTATGTCTTCTCCATTCCATTACACTCACACTCACTCTCACTCTCACTCTCACTCTCATTCTCATTCTCATTCTACTCCTTCAATTTCATTCATCACCCAAAACGAATCATCCTTTATTCCCTTTTCTCCCACCTTTGCCCACCTAGTGTTTGTATAAATGCCCCTTGGAGATGGACATGTTTGGAGTGCTCATTGAGCTATGGAGAGATTTTGTGTTCTCCTACTTTACTTCTCTTTCGCATTTTCACCCACTGTTCTGGCTATTCCTAGTGACGATGGTTTTTACTCCAGAAAGTTCAAATTTGAGATTCATGGACATGGACTTAGTAGAAGTTCCACCTATGAGTCGTCCTTGAAGAAGCTGAAACTACAAATTCAAAAGAGGTTCATTTCAAAACCCCAACTTAAATTCTTAGTCGATCAACCAAATGCTGTCACTGTTAACTCTCCATTCTCATTGCCTCCTTTTGATTCACTTGGACCAACTCCATTGCCCATCAACTCTCCTCCTTTCTGTGAAGACTCACCACCCCAAACTCCTCGATCATCTTCGTCGCCGTCGCCTCCACCACCACCACCTGGGATGATCTATTCCCACACGCCGCCTCCTCCGCTGTCTGGGATGATCTATTCCCACGCTCCACCTCCACCACCACCAGGGTTTCAGCCTAGTGTTCCAAGCAGAAGCCAAAGCCCTCCACCAGGCTCACCCAGCATCTTCCCCATAACGCCAATTGGCCCCTTGGCCCCAAATCCTCCAGCTAACATATCCAGCCCCACCCCACCAATTGGGCTTCCAAGCCCACCTCACCATTATGGGCCACCGAGCCCACCAAAACATGGTTATGGGCCACCGAGCCCACCAGTGTTTCTGCCACCAATGGTGTATCCACCGCCGGCTGGTCCACCTCCGGCAGGAGGGCATGGGGGGAAGCCAGGGTCGAGTGGTGCAGCATGGTGTGTGGCTAAGCCAACAGTGCCTGATCCAATAATTCAAGTGGCTATGGATTATGCTTGTGGGTCAGGAGCTGACTGCAAGTCCATTCAACCTAATGGACATTGTTATGAACCTAATACTGTATTGGCACACGCCTCATATGCTTTTAATAGCTACTGGCAGAACAACAAGGTGAGTGGTGGAACCTGTGATTTTGGAGGGACTGCCATGATTGTAACTGTGGATCCAAGGTGTAAGTTCGTCCTCGGTTGA ATGGAGAGATTTTGTGTTCTCCTACTTTACTTCTCTTTCGCATTTTCACCCACTGTTCTGGCTATTCCTAGTGACGATGGTTTTTACTCCAGAAAGTTCAAATTTGAGATTCATGGACATGGACTTAGTAGAAGTTCCACCTATGAGTCGTCCTTGAAGAAGCTGAAACTACAAATTCAAAAGAGGTTCATTTCAAAACCCCAACTTAAATTCTTAGTCGATCAACCAAATGCTGTCACTGTTAACTCTCCATTCTCATTGCCTCCTTTTGATTCACTTGGACCAACTCCATTGCCCATCAACTCTCCTCCTTTCTGTGAAGACTCACCACCCCAAACTCCTCGATCATCTTCGTCGCCGTCGCCTCCACCACCACCACCTGGGATGATCTATTCCCACACGCCGCCTCCTCCGCTGTCTGGGATGATCTATTCCCACGCTCCACCTCCACCACCACCAGGGTTTCAGCCTAGTGTTCCAAGCAGAAGCCAAAGCCCTCCACCAGGCTCACCCAGCATCTTCCCCATAACGCCAATTGGCCCCTTGGCCCCAAATCCTCCAGCTAACATATCCAGCCCCACCCCACCAATTGGGCTTCCAAGCCCACCTCACCATTATGGGCCACCGAGCCCACCAAAACATGGTTATGGGCCACCGAGCCCACCAGTGTTTCTGCCACCAATGGTGTATCCACCGCCGGCTGGTCCACCTCCGGCAGGAGGGCATGGGGGGAAGCCAGGGTCGAGTGGTGCAGCATGGTGTGTGGCTAAGCCAACAGTGCCTGATCCAATAATTCAAGTGGCTATGGATTATGCTTGTGGGTCAGGAGCTGACTGCAAGTCCATTCAACCTAATGGACATTGTTATGAACCTAATACTGTATTGGCACACGCCTCATATGCTTTTAATAGCTACTGGCAGAACAACAAGGTGAGTGGTGGAACCTGTGATTTTGGAGGGACTGCCATGATTGTAACTGTGGATCCAAGGTGTAAGTTCGTCCTCGGTTGA MERFCVLLLYFSFAFSPTVLAIPSDDGFYSRKFKFEIHGHGLSRSSTYESSLKKLKLQIQKRFISKPQLKFLVDQPNAVTVNSPFSLPPFDSLGPTPLPINSPPFCEDSPPQTPRSSSSPSPPPPPPGMIYSHTPPPPLSGMIYSHAPPPPPPGFQPSVPSRSQSPPPGSPSIFPITPIGPLAPNPPANISSPTPPIGLPSPPHHYGPPSPPKHGYGPPSPPVFLPPMVYPPPAGPPPAGGHGGKPGSSGAAWCVAKPTVPDPIIQVAMDYACGSGADCKSIQPNGHCYEPNTVLAHASYAFNSYWQNNKVSGGTCDFGGTAMIVTVDPRCKFVLG
BLAST of CsGy4G020700 vs. NCBI nr
Match: XP_004146069.1 (PREDICTED: leucine-rich repeat extensin-like protein 5 [Cucumis sativus] >KGN54998.1 hypothetical protein Csa_4G620610 [Cucumis sativus]) HSP 1 Score: 415.2 bits (1066), Expect = 2.1e-112 Identity = 334/339 (98.53%), Postives = 335/339 (98.82%), Query Frame = 0
BLAST of CsGy4G020700 vs. NCBI nr
Match: XP_008464632.1 (PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis melo]) HSP 1 Score: 356.3 bits (913), Expect = 1.1e-94 Identity = 306/348 (87.93%), Postives = 309/348 (88.79%), Query Frame = 0
BLAST of CsGy4G020700 vs. NCBI nr
Match: XP_022940775.1 (proline-rich receptor-like protein kinase PERK2 isoform X1 [Cucurbita moschata]) HSP 1 Score: 253.1 bits (645), Expect = 1.4e-63 Identity = 257/350 (73.43%), Postives = 281/350 (80.29%), Query Frame = 0
BLAST of CsGy4G020700 vs. NCBI nr
Match: XP_023524635.1 (leucine-rich repeat extensin-like protein 3 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 250.4 bits (638), Expect = 8.8e-63 Identity = 266/350 (76.00%), Postives = 288/350 (82.29%), Query Frame = 0
BLAST of CsGy4G020700 vs. NCBI nr
Match: XP_022976796.1 (formin-like protein 20 isoform X2 [Cucurbita maxima]) HSP 1 Score: 243.8 bits (621), Expect = 8.3e-61 Identity = 252/339 (74.34%), Postives = 266/339 (78.47%), Query Frame = 0
BLAST of CsGy4G020700 vs. TAIR10
Match: AT1G79480.1 (Carbohydrate-binding X8 domain superfamily protein) HSP 1 Score: 137.9 bits (346), Expect = 1.2e-32 Identity = 58/81 (71.60%), Postives = 70/81 (86.42%), Query Frame = 0
BLAST of CsGy4G020700 vs. TAIR10
Match: AT5G67460.1 (O-Glycosyl hydrolases family 17 protein) HSP 1 Score: 120.9 bits (302), Expect = 1.5e-27 Identity = 53/87 (60.92%), Postives = 67/87 (77.01%), Query Frame = 0
BLAST of CsGy4G020700 vs. TAIR10
Match: AT4G13600.1 (Carbohydrate-binding X8 domain superfamily protein) HSP 1 Score: 106.3 bits (264), Expect = 3.7e-23 Identity = 47/82 (57.32%), Postives = 58/82 (70.73%), Query Frame = 0
BLAST of CsGy4G020700 vs. TAIR10
Match: AT4G26830.1 (O-Glycosyl hydrolases family 17 protein) HSP 1 Score: 99.0 bits (245), Expect = 6.0e-21 Identity = 48/91 (52.75%), Postives = 57/91 (62.64%), Query Frame = 0
BLAST of CsGy4G020700 vs. TAIR10
Match: AT2G05790.1 (O-Glycosyl hydrolases family 17 protein) HSP 1 Score: 97.8 bits (242), Expect = 1.3e-20 Identity = 45/92 (48.91%), Postives = 60/92 (65.22%), Query Frame = 0
BLAST of CsGy4G020700 vs. Swiss-Prot
Match: sp|Q9SD84|PDCB2_ARATH (PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana OX=3702 GN=PDCB2 PE=1 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 4.5e-18 Identity = 37/83 (44.58%), Postives = 53/83 (63.86%), Query Frame = 0
BLAST of CsGy4G020700 vs. Swiss-Prot
Match: sp|Q9FNQ2|PDCB1_ARATH (PLASMODESMATA CALLOSE-BINDING PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=PDCB1 PE=1 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 2.9e-17 Identity = 37/83 (44.58%), Postives = 52/83 (62.65%), Query Frame = 0
BLAST of CsGy4G020700 vs. Swiss-Prot
Match: sp|O65399|E131_ARATH (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3) HSP 1 Score: 89.0 bits (219), Expect = 1.1e-16 Identity = 39/83 (46.99%), Postives = 53/83 (63.86%), Query Frame = 0
BLAST of CsGy4G020700 vs. Swiss-Prot
Match: sp|Q94G86|ALL9_OLEEU (Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea OX=4146 GN=OLE9 PE=1 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 1.9e-16 Identity = 40/91 (43.96%), Postives = 52/91 (57.14%), Query Frame = 0
BLAST of CsGy4G020700 vs. Swiss-Prot
Match: sp|Q94CD8|E134_ARATH (Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 1.9e-16 Identity = 45/90 (50.00%), Postives = 57/90 (63.33%), Query Frame = 0
BLAST of CsGy4G020700 vs. TrEMBL
Match: tr|A0A0A0KZY0|A0A0A0KZY0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G620610 PE=4 SV=1) HSP 1 Score: 415.2 bits (1066), Expect = 1.4e-112 Identity = 334/339 (98.53%), Postives = 335/339 (98.82%), Query Frame = 0
BLAST of CsGy4G020700 vs. TrEMBL
Match: tr|A0A1S3CLY4|A0A1S3CLY4_CUCME (leucine-rich repeat extensin-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103502468 PE=4 SV=1) HSP 1 Score: 356.3 bits (913), Expect = 7.6e-95 Identity = 306/348 (87.93%), Postives = 309/348 (88.79%), Query Frame = 0
BLAST of CsGy4G020700 vs. TrEMBL
Match: tr|A0A0R0EGA1|A0A0R0EGA1_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100791660 PE=4 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 5.5e-37 Identity = 72/88 (81.82%), Postives = 79/88 (89.77%), Query Frame = 0
BLAST of CsGy4G020700 vs. TrEMBL
Match: tr|G7J827|G7J827_MEDTR (Carbohydrate-binding X8 domain protein OS=Medicago truncatula OX=3880 GN=11432714 PE=4 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 5.5e-37 Identity = 73/85 (85.88%), Postives = 78/85 (91.76%), Query Frame = 0
BLAST of CsGy4G020700 vs. TrEMBL
Match: tr|A0A0B2PIP5|A0A0B2PIP5_GLYSO (Glucan endo-1,3-beta-glucosidase 4 OS=Glycine soja OX=3848 GN=glysoja_050070 PE=4 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 5.5e-37 Identity = 72/88 (81.82%), Postives = 79/88 (89.77%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |