CsGy4G020630 (gene) Cucumber (Gy14) v2

Overview
NameCsGy4G020630
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr4 : 27452912 .. 27456193 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAATGGTTTTTAGATGCCTATCATCGTCGTGATATATATATATATTGTAATGATCAAAAGAAAGCAATACTTATATGCTAGCAAAAATTTATCTCGAAAGAAAACCGAAAAAATGAAATCTAACATTATTTCGGTCATAGTTGTTCTATTCCTCATTTTCAATGGTAGGCAAGTCTTTTCCTATCATTAATGTTTTAGAAGAGAACTTGTTTATATTAACCATTAATTTTGTATTTCAATTGAATTTTACATATCTCGTTTTCTTTTATATTTAAAATTTGTTTTTGAAGTGTTCGTTTGTATTATTGAAGGAGAGAAAATGGTGACGGTAAGCGCCCAAGGATGCTCGACTGTTTTGCCGTTGTCTGATGCAACACCTTGCGTCGATTCACAATGTTATTTCTTGTGTAGTCTTAATTATCATCTATTGCCAGGAAAGTCTGCAACATGCGCTGGTCCTCATAGTTGTCTTTGTGTACACAAGTGTTGATGTTCAACCTCCTAATTTTCTATTTCAATAATTTTATTATAAACCCATGATTAACTACATAAAGTTTATTTGGAAATTATAATTTTACAACTTTTTCAATATATATTTAAGGGCAATTGCGAAAATGGCAAAATAAGTTATAATAATTAAGTTCATAGTACACACATTTTATTACTTACGAAAATGGCAAAAATGAAGTTCTGCACACATCAAGAGGTAAAATTTTCCAAATGCCCTTGTTACTAATATACGTTTGATACATCTTATACAAGTCTGATACACCTAATAAACGTCTGATACATCTAATATACCCATTGATATTACACTTGATACACTTGATGTGCATGATACTCTTTAATACACTCGATATCGAAATATACTAATATATGTTTGATACACCTGATACATTACATATACATTTAGTATTCTTCACTTATACAATTGATTGATTAAATGGACTTGATATGCTTGAAGTTCTACTTATACACTTGATATGCTATTGATATACACTTGTAAACTCTATTCATATACTTGATAATGATTCACTTTACTGATATGCTTTAATAATATATTGTTGATATACTTGATAATGATACACTGAGTTACATCGTTCATATACTTAATAATATTCTAATGAACTGCATAAAATTTGAAAAAATGAAAATCACGTAGTAAGTATATTAACCAACTAATACATATAATACAAGTATATCACAACTGCACAGCCTTCTTCGATTCATAATGTGTTACTGAAGATTCTACCAGTGATTTCATGTTGCAACTGTGATAAGAAATATAATGAAGAACTATGATCATAATTTATGGTTTTATCATATTTTGGCAAAGTATAAATGATTAGAAATATTTTCATTTTTAATTTTTTTGTTGCAATTTTAATATATTTTGTTATAGCTAGAAAATTCATTATATATTTGAAAATTAATTCAAAAGCATACAATATTAATAATAAATGTGAAAAAAATTTAAAAATTTTGCTACGTGCACTATGTACTTCTGTCAACAAATTTAGTGTGGGAGAAATTTTCTTTTCAACACAAAAATCTTTTCGTTGGCAGAAACAATTTCTGTCTACGAGACAAATGTGGACACGAAGTTTATTTTTGGTGACGTAATGATGATCATTGGCAAAAAGACCTTTCTTCCAACCTCTTTTTCGTGGCCAAAAAGTATATTTTTGTCGACGTAATGATGATCGTGGACAAAAATACATTTCTGCCAACGTTCTTTTCGTGGCAAAAAAGTATATTTTGGTCGGCAAAAATATCTTTCTGTTGATGTCTTTTTCGTGGCTAGAAATATCTTTTCTGCTCACAATTTTAATTTGCATGGGCATTTCTGTCGACGCAATGTCAAAACGTGGATAAAGAAAAAGATGACTGTGTTTCGGCCACCCAAAAAAAAAACGTCGACAGAAGCTTGACTCACATTTTTCATAAGAACTGCCCACATTTTTATACGTCGTCAAAGACCAAAATTCTTATAGTGATAGTTGATCGACATTCAACAAACTCAGGGAAGCCAGAGTTATCTTCAATAAGATTCAATCATATATGCATAGAGTCTGTTTTATTTAAGTGTTTGTTATAACTTTAATACAATAGCTTTTTTAGAAGAGCTTACCAGTAAGATGAGACAAAATATTTACTTTGTTGAATCTTATCTGAGCAGAAAACTCCTCAAACGTAGGTGTTATTCACGAAACTGGATTAACAAATTTCTCTCGTTCTGTTATGATAGTTATTTCTGCAGTTAATAACTTTGCATATAGCTAGATGATATATTATTGAGATCATCACGTTTATTTCAATTGGTATCAGAGCGTGGTTCTTGATCGAGGGAGATGCTTCAAGAAGGTGGATCAAAAACTCAGACCACCAAATATTTAATCTGTTTCCACCATGAAGAAAGTGTCCGATAGTGGAAGTATGTTGTCTAGAAAAGAATAGCAGATGAAGTTAACATCTATGATAAACATCACTTCTGCATTAGTGTTATGAATTTCTTAAAGCTGGCCTCTCCAAAACGATTGCTAATGTGGGTCCTTTCTATCCAAGATTAATTAGAGAACTCATTGTGAACCTTCGTTCTTACTTTAATGATCCTAGTAGCTCAAATTTTCAGCTTGTGCATATACGAGGGTCTCAATTCAGAATTTCTTCAGCTATTATTAATAGTTTACTTGGGAATAATGTTTCTTCTAACTGTGCCCCATCTCTGCCTTCAAATGATGAATTAACTTCGATTTTATCAGGTAGTACTTTATCAGTCTGGTCTGTTAATCGTATTCCAGTTGTCTCTTTGAGTATAAAATATGTTATATTACATAAGATAGGCATTGTCAACTGGTTCCCATCATCTCATGTTTCAAGTGTTTCAGCTACCTTGGGTATGCTTTTGTATCAAATTGGTATGGGTTTCTTAGTCGATGTTGGTTTGTTCATCTATACTCAGCTGTTAAGACATGTAGGGACGTATGGTGTGAAGATCTCGATTGCTTTGCATAGATTCTTCTGCAGCTTATTGCTTCATATTTGAATCCTGGAATTCTTTCTGGGCAAGATGCCCCAGGGCTTGATCCCAAAGATATTATCACTCAGTTATAGACTATTTCAGGGATCACATGTCCCTGATATAGAGCATTCTATGCGGCCTGCCAAGACTCCTAGAACTTTTGACTTCGAAGGTGTGGATGTAACTGCGGAAGATATTCATACTCCTCATGATTTGGCATCGCGGATTATTAATACTCTCACTGCTGAATCTTGA

mRNA sequence

ATGAAAAATGCTGGCCTCTCCAAAACGATTGCTAATGTGGGTCCTTTCTATCCAAGATTAATTAGAGAACTCATTGTGAACCTTCGTTCTTACTTTAATGATCCTAGTAGCTCAAATTTTCAGCTTGTGCATATACGAGGGTCTCAATTCAGAATTTCTTCAGCTATTATTAATAGTTTACTTGGGAATAATGGATCACATGTCCCTGATATAGAGCATTCTATGCGGCCTGCCAAGACTCCTAGAACTTTTGACTTCGAAGGTGTGGATGTAACTGCGGAAGATATTCATACTCCTCATGATTTGGCATCGCGGATTATTAATACTCTCACTGCTGAATCTTGA

Coding sequence (CDS)

ATGAAAAATGCTGGCCTCTCCAAAACGATTGCTAATGTGGGTCCTTTCTATCCAAGATTAATTAGAGAACTCATTGTGAACCTTCGTTCTTACTTTAATGATCCTAGTAGCTCAAATTTTCAGCTTGTGCATATACGAGGGTCTCAATTCAGAATTTCTTCAGCTATTATTAATAGTTTACTTGGGAATAATGGATCACATGTCCCTGATATAGAGCATTCTATGCGGCCTGCCAAGACTCCTAGAACTTTTGACTTCGAAGGTGTGGATGTAACTGCGGAAGATATTCATACTCCTCATGATTTGGCATCGCGGATTATTAATACTCTCACTGCTGAATCTTGA

Protein sequence

MKNAGLSKTIANVGPFYPRLIRELIVNLRSYFNDPSSSNFQLVHIRGSQFRISSAIINSLLGNNGSHVPDIEHSMRPAKTPRTFDFEGVDVTAEDIHTPHDLASRIINTLTAES
Homology
[Close]
BLAST of CsGy4G020630 vs. NCBI nr
Match: KGN61715.1 (hypothetical protein Csa_2G231965 [Cucumis sativus])

HSP 1 Score: 93.6 bits (231), Expect = 4.7e-16
Identity = 44/62 (70.97%), Postives = 52/62 (83.87%), Query Frame = 0 

Query: 5   GLSKTIANVGPFYPRLIRELIVNLRSYFNDPSSSNFQLVHIRGSQFRISSAIINSLLGNN 64
           GL KTIAN+GPFY RLIR+ IVNL S FNDPSSS +QL+HIRGSQF+IS ++IN  LGN+
Sbjct: 134 GLCKTIANIGPFYSRLIRKFIVNLSSCFNDPSSSAYQLIHIRGSQFKISQSVINGFLGND 193

Query: 65  GS 67
            S
Sbjct: 194 TS 195

[Close]
BLAST of CsGy4G020630 vs. NCBI nr
Match: XP_016903164.1 (PREDICTED: uncharacterized protein LOC107992057 [Cucumis melo])

HSP 1 Score: 92.0 bits (227), Expect = 1.4e-15
Identity = 42/64 (65.62%), Postives = 53/64 (82.81%), Query Frame = 0 

Query: 1  MKNAGLSKTIANVGPFYPRLIRELIVNLRSYFNDPSSSNFQLVHIRGSQFRISSAIINSL 60
          ++  GLSKTI+NVGPFYP+LIR+ IVNL + FNDPSS +FQ +HIRG +F+IS A+IN  
Sbjct: 4  IEKVGLSKTISNVGPFYPQLIRKFIVNLPTDFNDPSSPDFQTIHIRGFKFKISPAVINGF 63

Query: 61 LGNN 65
          LGNN
Sbjct: 64 LGNN 67

[Close]
BLAST of CsGy4G020630 vs. NCBI nr
Match: XP_008460447.1 (PREDICTED: uncharacterized protein LOC103499259 [Cucumis melo])

HSP 1 Score: 90.5 bits (223), Expect = 4.0e-15
Identity = 66/222 (29.73%), Postives = 84/222 (37.84%), Query Frame = 0 

Query: 4   AGLSKTIANVGPFYPRLIRELIVNLRSYFNDPSSSNFQLVHIRGSQFRISSAIINSLLGN 63
           AGL KTI+NV  FYP+LIRE IVNL   FNDPSS+++Q+VHIRG +F IS ++IN  LGN
Sbjct: 7   AGLEKTISNVSSFYPQLIREFIVNLPDDFNDPSSADYQIVHIRGFKFVISPSVINGFLGN 66

Query: 64  ------------------------------------------------------------ 115
                                                                       
Sbjct: 67  TVDIDCSPSCHTTEVLANVLSRGTLFTWPVNGIPAADLNVKYAILHKIGIANWFSSSHAS 126

[Close]
BLAST of CsGy4G020630 vs. NCBI nr
Match: XP_008465030.1 (PREDICTED: uncharacterized protein LOC103502746 [Cucumis melo])

HSP 1 Score: 89.7 bits (221), Expect = 6.8e-15
Identity = 64/212 (30.19%), Postives = 83/212 (39.15%), Query Frame = 0 

Query: 4   AGLSKTIANVGPFYPRLIRELIVNLRSYFNDPSSSNFQLVHIRGSQFRISSAIINSLLGN 63
           AGL KTI++VGPFYP+LIRE IVNL + FN+PSS+++Q VHI G +F IS A+I+  LGN
Sbjct: 286 AGLEKTISDVGPFYPQLIREFIVNLPNEFNNPSSADYQTVHITGFKFVISLAVIDGFLGN 345

Query: 64  ------------------------------------------------------------ 115
                                                                       
Sbjct: 346 TIYIDCSPSCSTTEVLATVLSGGTLSTWPMNGIPAAALNVKYAILHKIGIVNWFPSSHAS 405

[Close]
BLAST of CsGy4G020630 vs. NCBI nr
Match: XP_008462856.1 (PREDICTED: uncharacterized protein LOC103501137 [Cucumis melo])

HSP 1 Score: 89.4 bits (220), Expect = 8.8e-15
Identity = 46/71 (64.79%), Postives = 53/71 (74.65%), Query Frame = 0 

Query: 4  AGLSKTIANVGPFYPRLIRELIVNLRSYFNDPSSSNFQLVHIRGSQFRISSAIINSLLGN 63
          AGL KTI+NVGPFYP+LIRE IVNL   FNDPSS N+Q VHIRG +F IS A+IN  LGN
Sbjct: 7  AGLEKTISNVGPFYPQLIREFIVNLPDDFNDPSSVNYQTVHIRGFKFVISPAVINEFLGN 66

Query: 64 NGSHVPDIEHS 75
                DI++S
Sbjct: 67 ----TVDIDYS 73


HSP 2 Score: 56.6 bits (135), Expect = 6.3e-05
Identity = 27/50 (54.00%), Postives = 34/50 (68.00%), Query Frame = 0 

Query: 65  GSHVPDIEHSMRPAKTPRTFDFEGVDVTAEDIHTPHDLASRIINTLTAES 115
           GSHVPDI+H + P   PR FD    D +AE  +   +LA+RIIN+LTAES
Sbjct: 208 GSHVPDIDHDVHPTWGPRIFDTTDWDESAEGFYVDRELATRIINSLTAES 257

[Close]
BLAST of CsGy4G020630 vs. TrEMBL
Match: tr|A0A0A0LIG9|A0A0A0LIG9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G231965 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.1e-16
Identity = 44/62 (70.97%), Postives = 52/62 (83.87%), Query Frame = 0 

Query: 5   GLSKTIANVGPFYPRLIRELIVNLRSYFNDPSSSNFQLVHIRGSQFRISSAIINSLLGNN 64
           GL KTIAN+GPFY RLIR+ IVNL S FNDPSSS +QL+HIRGSQF+IS ++IN  LGN+
Sbjct: 134 GLCKTIANIGPFYSRLIRKFIVNLSSCFNDPSSSAYQLIHIRGSQFKISQSVINGFLGND 193

Query: 65  GS 67
            S
Sbjct: 194 TS 195

[Close]
BLAST of CsGy4G020630 vs. TrEMBL
Match: tr|A0A1S4E4L2|A0A1S4E4L2_CUCME (uncharacterized protein LOC107992057 OS=Cucumis melo OX=3656 GN=LOC107992057 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 9.0e-16
Identity = 42/64 (65.62%), Postives = 53/64 (82.81%), Query Frame = 0 

Query: 1  MKNAGLSKTIANVGPFYPRLIRELIVNLRSYFNDPSSSNFQLVHIRGSQFRISSAIINSL 60
          ++  GLSKTI+NVGPFYP+LIR+ IVNL + FNDPSS +FQ +HIRG +F+IS A+IN  
Sbjct: 4  IEKVGLSKTISNVGPFYPQLIRKFIVNLPTDFNDPSSPDFQTIHIRGFKFKISPAVINGF 63

Query: 61 LGNN 65
          LGNN
Sbjct: 64 LGNN 67

[Close]
BLAST of CsGy4G020630 vs. TrEMBL
Match: tr|A0A1S3CC22|A0A1S3CC22_CUCME (uncharacterized protein LOC103499259 OS=Cucumis melo OX=3656 GN=LOC103499259 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.6e-15
Identity = 66/222 (29.73%), Postives = 84/222 (37.84%), Query Frame = 0 

Query: 4   AGLSKTIANVGPFYPRLIRELIVNLRSYFNDPSSSNFQLVHIRGSQFRISSAIINSLLGN 63
           AGL KTI+NV  FYP+LIRE IVNL   FNDPSS+++Q+VHIRG +F IS ++IN  LGN
Sbjct: 7   AGLEKTISNVSSFYPQLIREFIVNLPDDFNDPSSADYQIVHIRGFKFVISPSVINGFLGN 66

Query: 64  ------------------------------------------------------------ 115
                                                                       
Sbjct: 67  TVDIDCSPSCHTTEVLANVLSRGTLFTWPVNGIPAADLNVKYAILHKIGIANWFSSSHAS 126

[Close]
BLAST of CsGy4G020630 vs. TrEMBL
Match: tr|A0A1S3CMY0|A0A1S3CMY0_CUCME (uncharacterized protein LOC103502746 OS=Cucumis melo OX=3656 GN=LOC103502746 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.5e-15
Identity = 64/212 (30.19%), Postives = 83/212 (39.15%), Query Frame = 0 

Query: 4   AGLSKTIANVGPFYPRLIRELIVNLRSYFNDPSSSNFQLVHIRGSQFRISSAIINSLLGN 63
           AGL KTI++VGPFYP+LIRE IVNL + FN+PSS+++Q VHI G +F IS A+I+  LGN
Sbjct: 286 AGLEKTISDVGPFYPQLIREFIVNLPNEFNNPSSADYQTVHITGFKFVISLAVIDGFLGN 345

Query: 64  ------------------------------------------------------------ 115
                                                                       
Sbjct: 346 TIYIDCSPSCSTTEVLATVLSGGTLSTWPMNGIPAAALNVKYAILHKIGIVNWFPSSHAS 405

[Close]
BLAST of CsGy4G020630 vs. TrEMBL
Match: tr|A0A1S3CJS2|A0A1S3CJS2_CUCME (uncharacterized protein LOC103501750 OS=Cucumis melo OX=3656 GN=LOC103501750 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 5.8e-15
Identity = 42/60 (70.00%), Postives = 51/60 (85.00%), Query Frame = 0 

Query: 4   AGLSKTIANVGPFYPRLIRELIVNLRSYFNDPSSSNFQLVHIRGSQFRISSAIINSLLGN 63
           AGLSKTI+NVGPFYP+LI++ IVNL   FNDPSSS++Q VHIRG +F IS+A+IN  LGN
Sbjct: 248 AGLSKTISNVGPFYPQLIKKFIVNLPDEFNDPSSSDYQTVHIRGFKFIISTAVINGFLGN 307


HSP 2 Score: 47.4 bits (111), Expect = 2.5e-02
Identity = 22/50 (44.00%), Postives = 31/50 (62.00%), Query Frame = 0 

Query: 65  GSHVPDIEHSMRPAKTPRTFDFEGVDVTAEDIHTPHDLASRIINTLTAES 115
           GSHVPDI+  + P++    FD    D +A+      +LASRI+N+LT ES
Sbjct: 449 GSHVPDIDRDVHPSRGSGIFDSSDWDESADGFFVDRELASRIVNSLTVES 498

The following BLAST results are available for this feature:
BLAST of CsGy4G020630 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN61715.14.7e-1670.97hypothetical protein Csa_2G231965 [Cucumis sativus][more]
XP_016903164.11.4e-1565.63PREDICTED: uncharacterized protein LOC107992057 [Cucumis melo][more]
XP_008460447.14.0e-1529.73PREDICTED: uncharacterized protein LOC103499259 [Cucumis melo][more]
XP_008465030.16.8e-1530.19PREDICTED: uncharacterized protein LOC103502746 [Cucumis melo][more]
XP_008462856.18.8e-1564.79PREDICTED: uncharacterized protein LOC103501137 [Cucumis melo][more]
BLAST of CsGy4G020630 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy4G020630 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy4G020630 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LIG9|A0A0A0LIG9_CUCSA3.1e-1670.97Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G231965 PE=4 SV=1[more]
tr|A0A1S4E4L2|A0A1S4E4L2_CUCME9.0e-1665.63uncharacterized protein LOC107992057 OS=Cucumis melo OX=3656 GN=LOC107992057 PE=... [more]
tr|A0A1S3CC22|A0A1S3CC22_CUCME2.6e-1529.73uncharacterized protein LOC103499259 OS=Cucumis melo OX=3656 GN=LOC103499259 PE=... [more]
tr|A0A1S3CMY0|A0A1S3CMY0_CUCME4.5e-1530.19uncharacterized protein LOC103502746 OS=Cucumis melo OX=3656 GN=LOC103502746 PE=... [more]
tr|A0A1S3CJS2|A0A1S3CJS2_CUCME5.8e-1570.00uncharacterized protein LOC103501750 OS=Cucumis melo OX=3656 GN=LOC103501750 PE=... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy4G020630.1CsGy4G020630.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy4G020630CsaV3_4G032470Cucumber (Chinese Long) v3cgybcucB171
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy4G020630Cucurbita maxima (Rimu)cgybcmaB470
CsGy4G020630Cucurbita maxima (Rimu)cgybcmaB515
CsGy4G020630Cucurbita moschata (Rifu)cgybcmoB437
CsGy4G020630Cucurbita moschata (Rifu)cgybcmoB484
CsGy4G020630Cucurbita pepo (Zucchini)cgybcpeB540
CsGy4G020630Cucurbita pepo (Zucchini)cgybcpeB566
CsGy4G020630Cucumber (Chinese Long) v2cgybcuB166
CsGy4G020630Bottle gourd (USVL1VR-Ls)cgyblsiB263
CsGy4G020630Melon (DHL92) v3.5.1cgybmeB275
CsGy4G020630Melon (DHL92) v3.6.1cgybmedB273
CsGy4G020630Watermelon (Charleston Gray)cgybwcgB259
CsGy4G020630Watermelon (97103) v1cgybwmB326
CsGy4G020630Wild cucumber (PI 183967)cgybcpiB169
CsGy4G020630Silver-seed gourdcarcgybB0323
CsGy4G020630Silver-seed gourdcarcgybB0634
CsGy4G020630Watermelon (97103) v2cgybwmbB265
CsGy4G020630Wax gourdcgybwgoB398