CsGy4G020350 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy4G020350
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	RING/U-box superfamily protein
Location	Chr4 : 27253500 .. 27269612 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACAATACGGTTGGCGGGCAAATTTGTTTCTTACGGCCACTTGAGAAAAAACCCATTGCAAACTCACGCTCTTCGGTTGGGCCCATAATCACCATTCAGTTTCGCATTTCGGAGAGTATCTATTTTTCGTTTAATCTCAGCGTTGCCGTGCCCTGTTTCCCGTAGAGATTCAATCGTTTTCGAAGGGTTTCTCTATCCGTTTCATCGAGTTCGTGCAGTTTTTGATGGAGGATGCTGTAGCTCGATTTCAAAGAACCGAAGAATCCACCTCAGTTTCTTCGGATCATCCCGAGGTGCTTTTTGTTCATTCCTTAAACGATTTACTTCAGCTATATTCTTACATTTCTCCTATCTGTTTGTGGGAACTATCATCGACATTCTTTACTCACTAGTTTGATTTATATGATAATGCTTTTCTATGCGTTCTTGTCCTTTTCGATCTGGTTGTACGGTAAAGAGAGTAGTTAGGTACAGTGCGAGTGGAAAGGGTGGAAATACTGCAATTTGATTTTCTTCCGATTGAACTGCCAAATGGCTTCTCTCTCCTTAGACAGTTAGGAATGGAAGTTTTAGCATCGTAGTGTAAATTTGATTGGATGTTGGTTTCCTTCCATGGTTACCATCAATCATATTGCGTGGCTCCTTTACGACTTTACCTGATATTGACTTGGAACTCAAAGAGAGGTTGTCTAGGTTCGGAGTTACCTGATATAACAGTGAACACTGATTAATCCAAAAACTCAAGCCAACAAACAGAAGAAAATTTAGTATTATTTGAACATATTAACACCCTCACCCACTCACGAGCTTGGAAATTTGTAGAAGACCCCAACTAGTGAAAACCAATATTAATTGGGGAGGAAATAACGGAGTTTGAATGCAAAACTTTTAGAACCTCCTGTGTTTTGATACAATGTTAAGTTTACGCAGGGAAATGTATGAAGTATTAATGTATATTATTTGTTAACTCAGTAATTACAACCATGCCTCTCAAATTCTTAAATATATACAGACAAAGAAAATAGCAGATTTACAGTAACAAGCAATCTGTTACAACTAACTAATTAATACATATACTATCGATATTATTACTTGATCTAAACGATGGATTTCATGCTCTGATTGCAAGTTTATCAAGGAACGAGAAAGTTATTGACGAGCTTACTCAAGCATAAGTTGATATTTGATAACGCGCTTCACACTAGCTGCTCCCTTTTGTTGGAACTTTTCTTTTTGAGTAACTGTAAGCTATAATTTTTTTTAAAAGACAAACAAGAAACAAACTAACTGTAGGAAATAGTTAACTTGCTCCAGGCTCATCTTTATTTTTTATTACAGTCTATGGTTGATTGATTTTTGAATAGTTTAGTGCCTTAGTTAGTTCAATTAGTTTATGCTTTTAACATGTCCATACTTTTTTATTCTTAGGTTGCTAAATTATTATATTTACTGAGAAGGGTCTTGGTTTTTCCTTAGAAACACGATGAAGAGGAAAAAGGTATAGAAACATCCTTATTGCCAAAGTTTAAACGGGCAAACTTATCCTCTCTGCAAATTCCAGCAAGGGCTCTGGAGAGTTCTTCATATCTTTTGAGTTCAGATAGTCCATTAACCTCAAGTTCTAGCTCTAGGGGAGGATTGCCTCCTAGACCAAATTCAGTAAAAACCAAATCTTCGGTGAGAAGCTTTGGAGCAAAACGATCTTTCCCAGGTGGAGACATCATCACTCCCATTTTACCAGAGATCCAACCAACTAATAGATGTCCAGACAACCGAACTCCCCCAAGATCTTTTTCTCTTAGCAAACTTCTTCTGGCCTCATCTACAAAAGCTGCGCATTCTTTACCAACCACACCAATTTCAAATTCAGATATTGATATATTGAAAGCAAATAATATAGAGTGCCATCCGGATTTCTCTGTAAGTATCTAAGTGTTCAAATTTCTAATTTTTTTTTTTATAACAGCTGTAAATATCCATATATGTTTTTGCTAATAGAATGCACACAGATGGGTGCTCCTGATACCTACGACTTGTGAATATTGCATTATTCTTTTCCTTCTGAAAGTGGATTTTGTTATTCTTACAGAAAATTAAAGCCAAGCCACAAATTGCTCGTTCATTATCAGCTCCTCTGAATGTTAAGCCTATAGCTTTAAGGCGATTAGATTCAGTAGGTTTAATTCGGATAGTGTCTGCAGATCCACGGTATGCAGGTGCTTCTCTTTCTCAAAGAAAGGAAATTGGTAAGTTGTATAATTAAATTTATAGTAAATCTTGGTGTTTTTTGTGAACTACCCCTTCTCAGATGATAAGCTTTGTCTTCTACTTACATGGCTACTCTGAGGTGATGACCTCACTAAATGTATGGGAAGGAACAATTTCACTTCAAAATCACTGGGAAGTATAGAGCTTAGCAATAAGACCAAGAAAGTTTAATAAAAATAAAAGCTTTTCTCGTTCTGATTGAAAAAAGAAAACATACAAACATCTGACTGGTTCCAAGAAATATCATAGAGGTTTTATATCCTAGATGCTCAATTTCTTTTTATGATTTTTGTTGATTCTTTAAGCAGCATACTTCTCAACTATTTTCAATATACAATATAAATATTTAATTATAACTGTATTGGTTTGACTTATATAGTTATATTACTATGTTTTCCTACATAAGACACTAATGTTACGAGATGAAAACTGAAAACGAGATGGTAAAACCCTTGACCAGCCCACTCCATTTTGTATGGGAGATTTTTTATCTTCAAATTCTCAACTAGAGGAGGGTGATTGCTTTTATGCTACAAGCCTTTTAAAATCTAGATAATATTAAATCACAATATGTTATACATAAGCAAAGCTGAGCTATTTTTATTTCTTCCTCTTAGAAGCATCATATTTAAAAACTAATTTTTTGTTTTCTGGGCTTTAATCAGGAACAACTAGTCAACTTTGTATTTTGTGGAAGTCAGGTTCCTCTTTTGACTGTCTTTTTGGAGAGGGACTAGTACGATAATTGCCAAAACACCTTTTTGATATGACTTTGGAAGAGTTCAACACTTAGAAAACTTTTATCTTTGTTTGGGGAAAGAGGACACACACACACACGCATATACATACACATGTGTGTGTGTTTGTGTGTCCAACTCAATGTTCATCATCCGTTAATGATGCCAATGTCAACACTGAATTATACTGCCTTAAAATTGCTTGAAACCAATCTAAAAATTGGAACAGTTTGCTGACTGTATTTATGCCCCTTTTGCTGCTAAATGCCTTATGTTCAATATCATTCTCTCCATGTAAGTTATTATTATTATTTTGCTTCGCTACAAATGTTTACAATAAGCAAAACATCTGACGTAATGCTCTGTGGGATTCCTTTTCACCTATTGACAACTATGTTTGCAGTTGGATGATTATAGTTTTAAAACTGACATACTGAAGTTGGATATTTGCCTTAGAAAGTGAACCTGCCGGTGATGATATTCCTGAGGATGAGGCGGTTTGTAGGATCTGTTTTTTAGAGTTGGTAGAAGGCGGGGATACTCTTAAAATGGAGTGCAGTTGCAAAGGAGACCTAGCTCTCGCTCACAAAGAGTGTGCAATTAAGTGGTTCAGCATTAAAGGTAACAAGATCTGTGATATTTGCAAGCAGGATGTTGAAAACTTGCCAGTGACTTTATTAAAATTACATAGCATACGCCCTGGTATTAGACGACCCACAATAACATTGCAGCGGACGGAAGTCAATCATTATAGGTTAGTTGGCTTCTAATACTGTCATGGACCTTCTCCTCTTTTATTTGGATATGAAGATAATGTATTGATCATCGTTTTTTCTTTTGGGTGAGAAATCATCATTTAAAATTCATTTATGTTTTAGCTCGTTTGTTAAGGAAAGGAAGAACTAAGACAGTTAGTGTTAGAGTGGTTATGCCCAATTTACATAAGAATTTGATTTATATAAGAAAAAAACAGTTTTTGGTACGAACTTAGAGGGGAAAAGAAAATGTATGTAGGGCTGTAAAAAGAAGTTTTGGAGGGAAATGGGAACAAAGACCGAGACAGATGATGGGGGAACATTGACTGTGGATATTTTGTAGAATATGAACTTTAGTGAAGAGAGAAGATTATTTGAACAATAACGTGAAGCAATCCACTTATGTTTTTTGTTTCTTTTTGAGTTTAATAATTTGTGAGGTGGAGGTTTGAACCTCCAACATTTTGGTTGAAGTTGACATTGATACTTGTCTAATATGTTGTGGAGGATGTTTCTCAAAGTTTGATTACTCCTCAAACAAATATCATGCCCTGTATGAAGGGGAAAACAAGCTCCTAAGAGATGATTGTGATACCATAATCATCAAGTTGGTTTGGTTTTTTGGAAAATATCGATAATATATTTTATTCACCTAATGCATCAACTCAGGGACATTGGAAATTTGAACGCATGCTGTGTAGTGTGTAGAGTAATCGTTAATGTGGTTTTATTTTATTTTATTTTGGTTGGAGTCCCAAATTTCTCCACGTTTATATTTCTTTTCAATAAGTGGTGTTTAATTTTCTTTCATCTAACAATATTTATTCTTCTTGAAGGCATTTTTAGCGCCAATACAAAGAAATTAAATGGAATCGTTGTCTCACTTTCTTTCATTCTCATAGGGTTTGGCAGCATATATCGGTGCTTGTGTTGGTTAGCATGCTTGCATATTTCTGCTTTTTGGAGCAACTTTTGGTACGGATGTATTCTGCTTATTTGTGATACTTATAGATGATCAGACTGGCTGTAATTCAAATTAGTTGTGCAAATGTCAATTAGATACATTATATTTTACATTTGTTATATTAAGCCATGTGGAATGCCATCTACTCCTTCACTCTTCTTGCTGGCTATCTGGGATAGCTCATCTCCAGTATGTGGAGTTAGGATGTGCCACTTTACGCTACTGTGGCTCTATTTCGTGAATTCTACACTCTTAATCTTGGATTCTTGGCTAACATACATTCAAATTAGACCCAAATTGCAACCAACCTTTGTTCTCGGTTAGTAATTGTGTGGGGTGGGCTTTTCATTCTGCTAACTTACACTTCATTATCAACTAGTAGCGCTCTTATGTCTCCTCTTCACCTACAGCTACAACTTAACCCAACCACCATCTCCATCAATGATGTCGTTTTACCAGCGCCAGATGGTGCTTTGTCATCATTGAAAGGGAGCCCTTCATAATTGAAGTAGATAGATAGCAACTGTAGAGGGAGCCAGATTCATATTAAGAACATTTTGGAGACCGTAAACTATGTTCAAGCAATACTGTTAGACCACCTATACTACACCAGTATAGTAGAAGAAAGAATAGGACAGGAAAGAGGGAGGGAAAAGAGTTAGTTGAGAATGTAAACGGCACAAGGGGGGATCACGACCCTTAGTGGGACATTTAGTTGGAGGGACCACAGTGAGTGGGAGGTGAGGAATAAATAGAGAAGGGATGAGAGGGAAGGGTATCTTTTTGGTGATCAGTTTCTGTGTATTCTTGAGAGCAAGAGTAACAGAGGGAGGAGGGGGAGTTCTATCGATTTGGTTGTTCAAACCAAATTGATTTGCGTTTATATTGTAATTTTCCTGTTTTTATCAATATATTTCTATTCCAGTTTGCTACCTAGTGTTGGAATATATGGTATTCCATCATTTTGGTATCAGAGCACGACGATCCTGGGAGAAGATTAAACATGGTTCAGACAAGAATCGAGGAGAGGTTGGAAACACATGATCAAGAACTCCGCAAGATACTAGTGATAGAAGAAAAACTCACGTCGATATCGCAAAATATGGAAGGCTTGCAGGCTCAAGTAGAGAAAACTCATCAGATGGTGAAGATATTTATGGAAACAATGGCAAGAGAACGAGCGATAGCAAGTGGTAAGGTGACGGAGTCAATCGTGCAAGCCACACCAACGACGAAATCGGCTGAAGGAGAGAGTTCGGCTGGCAAGGAAATAAAAAACGGCACGCCAGAAAAGAAAGATGATAATGAAGGGGAGAACAACAATCGAAGCAAGTTCAAAAAGGTCGAAATGCTGGTATTTAACGGAGACGACCCCGATTCATGGCTGTTCCGTGCAGACAGATATTTTCAAATTCATAAGTTAACTGACTCGAAAAAACTCACGGTAGCGACGATTAGTTTTGAAGGCCTTGCTCTCAATTGGTACCGATCTCAAGAGGAGAGGGATAAGTTTACAGATTGGTTGAACTTGAAGGAGCGATTGTTGATCCGTTTCCGATGAATACGCGAAGGCTCTCTGTATGGCCGATTTTTACGCATACAGCAGGATTCGAGTGTGGAGGAATATCAGAACCTCTTTGATAAATGGGTGGCGCCATTGGCGGATATTCGGGAGAAAATAGTGGAAGAAACATTCATGGGGGGACTGTTACCGTGGATTAAGATAGAAGTAGAATTCTGTCGTTCGGTGGGGTTGGCCGAAATGATGAAATATGCATTGATGGTGGAAAATCGGGAAATCTTGAGGAGAGAGGCAAACCTTCCGGGGTACTCTATAGCCAAAATCACAAACTACCCCCACACTAATGCCAAAACGAATACGGTTAACAACGACCAAGCGAGTAAGGGAAACACTGTCTTTTCGATGAGGACGGTCACACTCAGAGGAGCTCTGGCGGCAGAGATTAAGAAAGAAGGGCCATCAAAAAGGTTATCCGACGTGGAGTTTCAGGCAAAAAGAGAAAAGAGACTCTTTTCAAGTGTGATGAGAAATATTATTCAGGGCATAAGTGCAAGGCTAAGGAATTACATGAATTGCGAATGTTTGTAGTAAGGGCCGGTGACGTAGAGGAGGAAATCTTCGAGGAGGACGAGTATGAATAGGGTGAGCTGAAGACCATGGAGTTGCAGGGTGAGATCGGGGGAGTAGTAGAACTATGTATTAATTCAGTGGGGTTAACAAATCCTGGTACGATGAAGATAAGAGGAATAATTGAAGGGAAGGAGGTGACTGTGCTAGTCGACTGTGGTGCTACGCACAATTTCATATCAGATAAACTAGTGTTAACTTTGCAAATAGCCACCAAGGATACCTCCAATTATGGGGTAATTCTAGGGTCTGGAAAGGCAATCAAGGGTAAGGGAGTTTGTGAACAAGTGAAGCTTAAAGTTGGGTGGAGTAGATATAATACTAGGAATGTAGTGGTTATATTCATTAGGAGTAACTGAGATGGATTGGAAGAATCTGGTTATGTCTTTTGTTCATAACAAAAAAAGATGATAATAACAGGGGATCCCAGTTTAACTAAGACTCAAGTCAGCTTGAAAAGTTTAACTAAATCATGGACTGACTCAGACATGGGGTATTTAGTTGAGTGCAGAGCTTTGGAGGCAAGAATCATCGAACCGGGACCACAAACAGAGGAAGGAATTATTACCATACCAGAGAGAATTCGAGCAGTATGAGGATGTGTTCGAATGGCCTGAAGAACTATCTTCGGAGAGAGCCATCGAACATCACATACACATCAAAGGGGGTACAGATCCAGTCAACGTCAGGCTCAGACCCTATAGGTATGCTTTTCAACAGAAGGAGGAGATGGAGAAGTTAGTGGATGAGATGCTCTCATCTGGAATCATCCGGCCCAACACCAGCCCGTATTTGAGTCCAATCCTCTTGGTGAAAAGAAAAGATGGGAGTTGGCGGTTTTGCGTGGACTACCGAGCCCTGAACAATGTCACCATCCCAGATAAGTTCCCTATTCCGGTTGTGGAAGAACTCTTTGATGAATTAAATGTGGCAAACCTATTCTCTAAGATTGATTTAAAGGTTGGATATCACCAAATTCGAATGTGCCATCAAGACATGGAAAAAACAGCTTTTAGAACTCATGAAGGACACTATGAGTTTCTAGTAATGCCATTTGGACTCACAAACGCCCCTGCAACATTTCAATCTCTGATGAATAACATATTTAGAGCATACTTGCGAAAGTTTGTTCTGGTCTTTTTCGATGATATCCTAGTCTATAGTAGAGGCTTGAAAGAGCACTGCCAACACATTGAGTTGGTTTTGGAAGTACTGAGAAACAATAGGCTGTATGTCAACAAGAAAAAGTGCAGCTTCGCCTACCCTAAACTAGAGTATTTGGGGCATGTTTTATCTGGAAAAGGGGTGGAGGTGGATCCCGAAAAGATCAGATCAATCAAACAGTGGCCGGTTCCAACAAACGTTCGGGAAGTGAGGGGATTTCTGGAGTTGACCGGATACTACCGTCGATTTGTACAGCATTACGGATCCATTGCAGCTCCTTTGACTCAATTATTAAAGTTGGGAGCTTTTAAATGGAATTAGGAGGCTCAGGGAGCATTTGAGAGGCTGCAAAAGGCAATGATGACACTACCTATCCTGGCACTTCCAGACTTCAATGTACCATTTGAAGTGGAAACCGATGCTTCCGGGTATGGGGTGGGAGCTGTCTTAATGTAGAATAAGAGACCTATTGCGTTCTACAGTCACACACTAGCTATGAGAGACCATGCCAAACCAGTCTATGAGAGGGAGTTAATGACGGTTGTGTTAGCAGTTCAACGTTGGCAGCCTTATTTGTTAGGTCAGACATTCATACTCAAAACGGATCAACGCTCACTCAAGTTCCTTCTAGAACAAAGGGTAATCCAGCCACAGTACCAAAAATGGATTGCAAAGTTACTTGGCTATTCATTTGAGGTGGTGTATAAGCCCGACTTGGAAAACAAGGCAGCTGATGCGTTATCCCGAGTACCCCCTGCAGTACATCTCAGCCAATTAACAGCCCCTACGTTGATTGATCTGAAAGTCATAAGGGAGGAAATGATGAAGGATGAGTTCCTAAAGGAGATTATTCTCAAGTTGCAGAAAGGGGAAGAAGTGGGAAATTATACTTGGCAGCATGAGATGCTTCGATATAAGGGAAGAATCGTGATTGCAAAAAGCTCCTCCTTGATCCCTACTATTATGCACGTGTACCATGATTCTGTGATGGGAGGGCATTCGGGGTTCTTAAGAACGTATAAGCGGCTGACAGGCGAACTATTTTGGGTTGGCATGAAGTCTGAAGTACAAAAGTATTGTGAGGAGTGTGCCACATGCCAGCGAAACAAAACATTAGCATTGTCACCAGCAGGATTGTTAACCCCATTGGAAATACCAAACAGAATTTGGGAAGACATTTCTATGGACTTCATTGAGGGATTACCCAAGTCCTGTGGTCAGGAGATAATTTTTGTGGTGGTAGATCGTTTCAGTAAGTATGCCCACTTCCTAGGCCTTAAGCACCCCTTTGATACTAAGATGGTGGCGGATTTGTTTGTGAAGGAAGTGGTAAGATTGCATGGTTTTCCCCAATCAATAGTCTCGGACTGAGATAAGATTTTTTTGAGTAATTTTTGGAAGGAGTTGTTTCGTCTGGCAGGGACAAAACTGAACAGAAGCACTGCTTATCTCCTTAAACGGATGGGCAGACAAAGGTAGTAAACAGGCCAGTCAAGATTTATCTACGTTGCTTCTGTGGGGAAAGACCAAGAGAATGGATAAAATGGCTTCCTTGGACAGAATACTGGTATAATACTACCTAACAACGCTCCTTAGGGGTATCCCCTTTTCAGGCAGTATATGGACGGACCCCACCAGCTTTGATATCTTATTGCAGACCGGGAGACTTCCATTTCCACACTGGATGAGCAGCTCAAGGAAAGAGATATGGTATTGGATGCTTTGAGAGAGCATTTACGCATAGCACAAGACAAGATGAAGAGTTATGCGGATATGAAAAGATGACACGTGGAATTTGAGAAAGGAGACATGATATTCTTAAAAATCCGACCCTACAGGCAGGTTTCTATGCGACAGAGGAGATATGAAAAACTATCTCCTAAATATTTTGGCCCCTATCAAGTACTAGAGAAAATCAGCCCTGTGGCATACAAGTTGGAATTACTGGCTGCAGCAACTATTCACCCTGTGTTCCACATTTCACACATTTCACAATTGAAGAGAGCCTTCGGGAATGTGCTAGAAAGGAGGAATTAGTGCCTTTTTTGACCGAGAATCACTAGTGGGTTGCTGTACCAGACGAGGTTTACGGATATCAAAAAAATGGGAAGGGAACTTGGGAGGTATTAATAAGCTGGAAAGGGCTGCCGAGGCATGAAGCAACTTGGGAAAACTATGATGATTTCCATCAGTCTTTTCCTGATTTCCACCTTGAGGACAAGGTGAAACTGGAACGGGAATGCAATGTTAGACCACCTATACTACACCAGTATAGTAAAAGAAAGAACAGGACAGGAAAGAGGGAGGGAAAAGAGTTAGTTGAGAATGTAAACGGCACAAGGGGGAACCACCACCCTTTGTGTGACGTTTAGTTGGAGGGACCACAGTGAGTGGGAGGTGAGGAATAAATAGAGAAGGGATGAGAGGGAAGGGTATCTTTTTGGTGATCAGTTTCTGTGTATTCTTGAGAGCAAGAGTAACAGAGGGAGGAGGAAGAGTTCTATCGATTTGGTTGTTCAAACCAAATCGATTTGTGTTTATATTGTAATTTTCCTGTTTTTATCAATATATTTCTATTCCAGTTTGCTACCTAGTGTTGGAATATCTGGTATTCCATCAAATACCATATTTCTTTTTTAGCATCATTTCGAAAGGAATTGCCTCAGTTAGCATTTCAAAAGCCACTAAGTTAGAATGGGGGAATACCTTTCTCTAGTCTAGCCAAATCCAAAACCAGCTTGAATTCTTGACACATAAGATTCCAGTTCACTTTAGAAGTGGCGGCCACTATTCGCATTAGCTTCCTCACAAAAGATACTTCTCTTAAGGCTGATGGATATTCCTGCTAAGACCACCCCAAATTACAACCCCGTAAGAAAATTTGAAAGATAAGAGTACCATGAATTTTACACCTATTTTTTAATACACCAAAATATAGGCTTGGTTTCCAAAACTTTTATGGAAGTAACAATGGAGTACTTGAACTTAGCTGGCAACCATTAGTCCTTATACTATCAAATTGAACTCTAATGAATAATTATTTAGTCTCTGTACTTCAAATTTTAATGGTTGATATCAGAGTTAATTTATAGTTAATTTATGCGTAGATCTTTGAAGTGATTTAGTGTATTAACATTTTCTAATTTTTTTCTTTCCAACTTCCCTGCTACTTTTTCCATAAATATTCTCCTATTTTTTTTATAGAAAATAATTTTATTGATAAATGAAATCTACCAAAGGTAGAGCCCATCAAATCTCCATTAAAGTTGGCAGACCTCTCACATAAAAGAACTAAGGAATCTTGATCACAATTTTTAGTGTTTGGAAGTCTACTTTATGAAGTCACTGCACATAATAGCGGAATCAGTTTTTGAATGCATTGCCTTCCTTTGAAAATGATAACTATTGTATAAATATTGAAAGAATCCCTATTTCTTAGCAATTAGCTTTTGGATTTGCTACAATTTTTTCTCACAACTTTGGTTCACTTCTGTCCATCTAATGGTTAAATCCTCATGGTGCTGGTGCTTCCTTTCTTTTTATCCTTATTCGCAGTCCCTTATTTCTCAAATCAAATTAATTTCCACAATTGAATTCTGTTTAACAGGTACGTGACATGGGCCCTCGTGCACTTGCCATTTCCTTGCCATTTTCTTGTGCTTTGGGTCTCCTCTCATCCATGACTGCTTCCACAATGGGTCAGTTACTGCTATGGATAAATATATTAAATCGTATCAACATTCATTGTTGGATATAATTTAGTCCCGCTGCCTCTGTATTCTTCTATTAATTAAATGGTGAAAGAATCTATGGAGCTGTATGGGGTCTATTTTATGAGAATATGTAAACATCTTCATTGTGAGCTCCAGAAAAATTAATTGTTTGAAAAGAAAACAGTTGTACAAAAACAATTTGGGATTCTTGTAATTTTCTTTTGTTTAAGATTTTATTAATAGAAATTTGGGTTATTGTATTAGGCTCCAATTGAGGCATTGTGAGAAGAGCGTAGAAAGAAAATGAGACCTCAAAGTTCATTAGGGTAGGCACCAGCCCCACCATAAGTAGGAGGAATATTGTAGCCTTGCATATGTTTCTCCCTCAAAAACGGCATGCCTTCCTATTAGGTCTCCAATGAGGAAGTTTAAGGCTGAGTGGACATTGCAGGACCCATTGCAGCCTTCCCATTGCTTCACTCAACCTACGGGTTACTGACAGATGCCAACTCAATTAATGAGTTGAGCTCTCTCGTGTCTTACCTTTACATGGGTTTTTTCCCCCCCTTTTTAAAAAAATTCTTGAATGCTAAAACAATGCTCCCTCGAAAACTCTGCTGGCGAAATGCTCCATCAATTTCCTATTGCAGAAAATAAGCTTAAGAGTAGCAAAACAGGTACTAAATACACTCACATAGGAATATGAGTACTCAACTGCCGCAACTATCAAAACATGAGCATTATTGGGGAAAGACATCAGTAAATCACTAACAACTAGCACATTTTATGGTTTATGGTTGCATTGTTGACCTCTTACTAGTTATAATGTTAGGCTGGTGTTGATACATATCAAATGACTACTTGATAGGAATATGTACTAGTTATAAAATAATAGTTTCATCAATCTTACTAGTTTCAACAATGTTAGGCTGGTGTTGATACATATCAAATGACTACTTGATGGGAACATGCACTAGTTATAAAATAATAGAAATAATAGTAAAATACTTTCGATTGTGTCTTGACACAAAAAAGGGAAAACAATGTTAAACAGTTGGGCGATAGGGTAACTGCCAAGGTTATTGTGTCAATTTTTCTCTAATTAGCATCGCATGCCATGTGTGATAGCTTTTTAATATGGTCTCTCATTCTTGCTTAGATTATAAAAGGTATGCCTTTGATGTACTTTCATTGCCCAATAACCATTGTATATTTAAATGGTGGCAGCGAGCAGAGCATACATTTGGGCTCATGCTTGTTTCCAGTTTGCTATAATCATCCTGTTTGCTCACGTATATTATGCAATAGTAAGTACAAGCAGTTTCCTATAACTATCTGCCTATTTTGTCTCATTATTTTGAGTGTTCTTGATCATCGGCTACTATTCTCATTTCGACATGCAGCTTAATGTGAATGCCGTTCTCTCTGTTTTCCTTTCTGCACTCACCGGATTGGGGCTTGTTATCAGCATAAACTCACTTCTGATGGAGTATCTTAAGTGGAGAAGAAGAAGGCAATTGAGACCTGCCAATCAACAGACGGGAACAAGGAGTTGGCCGCAATTACAACAGCAGCTATATGACAGTAATTACCATCAACAGCATGAGCAGCGGTTGGAGCAAGAACGCCATCAACCACATTCTCAGCAGCAAGCTATTGAAAATCAAAATATGGAGTCATTAGAGAGTGCCGATCAGGAAGGAACAACTATTCTGAGACAACAGCTCACTGAGGTGCCAAAGGTTAGTACCTATTCGGGACTAAGAAAATAGTTGGTTTCCTCTCTCTTTTTATGTGAGATCAATTATCTCCCAAGGATGGGGTTTAGCCCTCTTAGTCCAGAACATGAGTTGGCTTTGAAAATCACGATTATGATAAGAGTTTAGAGGGAATGAATTTGAGCTATAGTGGTAGTTTTTTTGAATTATTTGATCGTGTGACCTAATGTTCATAATATAAAGAAATAAAAGAAGCTCCCCCGCCAAAAGAAAAAATGGGCATTTACATGTATAGAAAAATGAATCAAAATATTTATAAAATATAGTAAAATTTCAGATCTATAACTGATAGACACTAACAAAAGTCATTGTTAGAATTTGAAATTTTGTTCTATTTTGTAAATATTTAAGACAGTTTCGTCATTTACCATAATTCACTCATAAAAAGAAAGAAATGAAATAAACAAAAGGACAAAAATACAACTAGAAGAAACCCTTATGTAGACAAAGCAAAAAAAAAAACAAGATAAAGCAATTACAATCAAATACAACCCATAGTGGAACAAATTGGCACTTGAACGAAAACCACTGAATCCAAAGTTATTTGAACAACCATGTGTAGTAAGGACCATTCAAAGTACTGAAGAAAGACCAAAACTTCAAAAACCAACAGAGACTGAAACATTCGTAACTCTTGAGACAAAAGATCCTTCCAACCTAAAAATCTTCCATTTCATCATTGGAAAACCTTGTTTCTTTTTAATATATATATTGATAGTATGACATAAAAAAAGGGCTCAAATGAGATTTGACCTAGGCTTTCAAAATATGGTTTCCCACCCTTCTCTATTTATTTCTTATAGAAAAAACACTTCATTTTATTTCAATTCTTCTTCTTCCTCTTTCCGAATCTTGTTCTATTACTCTCTCCAAACATTACATTTTCCCTCTTCCTCTTGCTTCACCACTTTTCTTCTTCTCATCCTCCACCCTACCATTTGCAACCCTTCCGCCACCAACGAGGGTACTCTTAGATCTGACATTTCATATTTGAAGGAAATGGCGTGGTAGATTAAGAGTATGTAAAAAATTGAGCAAGAACAAGAGCATGAGGGACTGATAAGGAAAAATTGTGAGCAAGAAGGTGAGAGGGGGAAAAGAGACAAAAATTGAACAAAACCTGGTGATGCTGACAAAAAGAAAGTTAAAAAAACTCTTCGTTCAAGTTTCAATCGAGCACGGTTTTTTAGATCATCCATACAAAAGCCTCTAGCTTTCTTTGCAGAGTCAGACAATCGTTCATGAGAATAACCGATCGAGGTGCATGCAAGTTGTCTCATATTAAAAACAGTCACATGAAAAAGGATGGTTCTATAACTTTTATTTGTATCCACCTCCGTTCTTATTGCCGTCATTTTACCGTTCAAATAAAGATAAAGTTTCTTGAGAAATTTCATGAAAATGCTCCTTAGATGGTCTCTGCTCCAAATTGGTGCGTACTTTGCCATGCTAATTCCGAAACAATTATTACATCTTGGTCTTTTGGGAATATGCTCAAACTTTTCCAAATGTTAAAATCCTTCGATTACCATATGGCTTTTCCAAATGAACCTCTAACCTTGTTGAGTATGATTTTCATTGGTCATCCTTTCAAGAGATATTATGGGAATTCATCGTCGAAGGATTCTTATGGCTTATTTGGAATGAGCTGAATCTTCGTACTTTTGAAGATAAAGAAACTGAATTCATTCAATTCTTTGACCATCTTATGTACACTTCTCTGTCTTGGTATAAATTCACGAAGTTTATTTTGTGATTACAACCTTACTTCTCTTATTGCACAAATGAATAGCTTCATGTAATCTCATTGGTTTTGTGTCCTTTTGTAATTTCACATAATCAATGAAATTATGATTGTCTGTGTTTATTAGCTTCATGGGTTTATATGAATTCCATTCTAAGAACCCGTTGGAACAGATGAAAAGACAATGGCCCATTGAAATAAGACTCTAGACTTACAATCTTAACCTTATTTTATTATTCATTTTTATTACTTTGTCCAGCCGCAGCTCAACCTATGATCCATTTTTGTTCTATCCCACTAGACCAATTGATTCGACAATTTGTGGGATGGAGCTCATAATTACTGTCCAAAAGCCTGAGCGATCAGATGGAAGATAGCAGCGAAATCTAAATGCTTTCATTAGAAAGCTAGAGTCAAAGTTTTGGAAGTTCAAACAATTATTTTGGTGAGTTGTTCCCTCTTGACATAACAAAGTTGTGTCATTAGCAATAATGATGGCATAGCTCATCTGACATAAATTTATATTATAAACTTCCATACGAAAAGTTTGATTAGGTAAGAATTTTGGTTGTGTATTATGTATATCATATGTCTGTGCTAGCATTGGGTGGTGGCATATAAGTTTTGTTAAGAAGGTTTTCTATGAATTATCACAAAATTTTGTGCGTTTTTATTGAAACTATATGTAATTTGTGTATATTTATGTAAATAAATATTTACATTTTATTTTTATCTTCACATTCACACATATTTTAGTTTGAGTTAAAATACCTTGACTTGTATTTAAAGATCATAGATTTAAATTTCATTCTACAAATGTATGGATGGATGATTGAAACG

mRNA sequence

AAACAATACGGTTGGCGGGCAAATTTGTTTCTTACGGCCACTTGAGAAAAAACCCATTGCAAACTCACGCTCTTCGGTTGGGCCCATAATCACCATTCAGTTTCGCATTTCGGAGAGTATCTATTTTTCGTTTAATCTCAGCGTTGCCGTGCCCTGTTTCCCGTAGAGATTCAATCGTTTTCGAAGGGTTTCTCTATCCGTTTCATCGAGTTCGTGCAGTTTTTGATGGAGGATGCTGTAGCTCGATTTCAAAGAACCGAAGAATCCACCTCAGTTTCTTCGGATCATCCCGAGAAAATTAAAGCCAAGCCACAAATTGCTCGTTCATTATCAGCTCCTCTGAATGTTAAGCCTATAGCTTTAAGGCGATTAGATTCAGTAGGTTTAATTCGGATAGTGTCTGCAGATCCACGTTGGATATTTGCCTTAGAAAGTGAACCTGCCGGTGATGATATTCCTGAGGATGAGGCGCTTAATGTGAATGCCGTTCTCTCTGTTTTCCTTTCTGCACTCACCGGATTGGGGCTTGTTATCAGCATAAACTCACTTCTGATGGAGTATCTTAAGTGGAGAAGAAGAAGGCAATTGAGACCTGCCAATCAACAGACGGGAACAAGGAGTTGGCCGCAATTACAACAGCAGCTATATGACAGTAATTACCATCAACAGCATGAGCAGCGGTTGGAGCAAGAACGCCATCAACCACATTCTCAGCAGCAAGCTATTGAAAATCAAAATATGGAGTCATTAGAGAGTGCCGATCAGGAAGGAACAACTATTCTGAGACAACAGCTCACTGAGGTGCCAAAGGTTAGTACCTATTCGGGACTAAGAAAATAGTTGGTTTCCTCTCTCTTTTTATGTGAGATCAATTATCTCCCAAGGATGGGGTTTAGCCCTCTTAGTCCAGAACATGAGTTGGCTTTGAAAATCACGATTATGATAAGAGTTTAGAGGGAATGAATTTGAGCTATAGTGGTAGTTTTTTTGAATTATTTGATCGTGTGACCTAATGTTCATAATATAAAGAAATAAAAGAAGCTCCCCCGCCAAAAGAAAAAATGGGCATTTACATGTATAGAAAAATGAATCAAAATATTTATAAAATATAGTAAAATTTCAGATCTATAACTGATAGACACTAACAAAAGTCATTGTTAGAATTTGAAATTTTGTTCTATTTTGTAAATATTTAAGACAGTTTCGTCATTTACCATAATTCACTCATAAAAAGAAAGAAATGAAATAAACAAAAGGACAAAAATACAACTAGAAGAAACCCTTATGTAGACAAAGCAAAAAAAAAAACAAGATAAAGCAATTACAATCAAATACAACCCATAGTGGAACAAATTGGCACTTGAACGAAAACCACTGAATCCAAAGTTATTTGAACAACCATGTGTAGTAAGGACCATTCAAAGTACTGAAGAAAGACCAAAACTTCAAAAACCAACAGAGACTGAAACATTCGTAACTCTTGAGACAAAAGATCCTTCCAACCTAAAAATCTTCCATTTCATCATTGGAAAACCTTGTTTCTTTTTAATATATATATTGATAGTATGACATAAAAAAAGGGCTCAAATGAGATTTGACCTAGGCTTTCAAAATATGGTTTCCCACCCTTCTCTATTTATTTCTTATAGAAAAAACACTTCATTTTATTTCAATTCTTCTTCTTCCTCTTTCCGAATCTTGTTCTATTACTCTCTCCAAACATTACATTTTCCCTCTTCCTCTTGCTTCACCACTTTTCTTCTTCTCATCCTCCACCCTACCATTTGCAACCCTTCCGCCACCAACGAGGGTACTCTTAGATCTGACATTTCATATTTGAAGGAAATGGCGTGGTAGATTAAGAGTATGTAAAAAATTGAGCAAGAACAAGAGCATGAGGGACTGATAAGGAAAAATTGTGAGCAAGAAGGTGAGAGGGGGAAAAGAGACAAAAATTGAACAAAACCTGGTGATGCTGACAAAAAGAAAGTTAAAAAAACTCTTCGTTCAAGTTTCAATCGAGCACGGTTTTTTAGATCATCCATACAAAAGCCTCTAGCTTTCTTTGCAGAGTCAGACAATCGTTCATGAGAATAACCGATCGAGGTGCATGCAAGTTGTCTCATATTAAAAACAGTCACATGAAAAAGGATGGTTCTATAACTTTTATTTGTATCCACCTCCGTTCTTATTGCCGTCATTTTACCGTTCAAATAAAGATAAAGTTTCTTGAGAAATTTCATGAAAATGCTCCTTAGATGGTCTCTGCTCCAAATTGGTGCGTACTTTGCCATGCTAATTCCGAAACAATTATTACATCTTGGTCTTTTGGGAATATGCTCAAACTTTTCCAAATGTTAAAATCCTTCGATTACCATATGGCTTTTCCAAATGAACCTCTAACCTTGTTGAGTATGATTTTCATTGGTCATCCTTTCAAGAGATATTATGGGAATTCATCGTCGAAGGATTCTTATGGCTTATTTGGAATGAGCTGAATCTTCGTACTTTTGAAGATAAAGAAACTGAATTCATTCAATTCTTTGACCATCTTATGTACACTTCTCTGTCTTGGTATAAATTCACGAAGTTTATTTTGTGATTACAACCTTACTTCTCTTATTGCACAAATGAATAGCTTCATGTAATCTCATTGGTTTTGTGTCCTTTTGTAATTTCACATAATCAATGAAATTATGATTGTCTGTGTTTATTAGCTTCATGGGTTTATATGAATTCCATTCTAAGAACCCGTTGGAACAGATGAAAAGACAATGGCCCATTGAAATAAGACTCTAGACTTACAATCTTAACCTTATTTTATTATTCATTTTTATTACTTTGTCCAGCCGCAGCTCAACCTATGATCCATTTTTGTTCTATCCCACTAGACCAATTGATTCGACAATTTGTGGGATGGAGCTCATAATTACTGTCCAAAAGCCTGAGCGATCAGATGGAAGATAGCAGCGAAATCTAAATGCTTTCATTAGAAAGCTAGAGTCAAAGTTTTGGAAGTTCAAACAATTATTTTGGTGAGTTGTTCCCTCTTGACATAACAAAGTTGTGTCATTAGCAATAATGATGGCATAGCTCATCTGACATAAATTTATATTATAAACTTCCATACGAAAAGTTTGATTAGGTAAGAATTTTGGTTGTGTATTATGTATATCATATGTCTGTGCTAGCATTGGGTGGTGGCATATAAGTTTTGTTAAGAAGGTTTTCTATGAATTATCACAAAATTTTGTGCGTTTTTATTGAAACTATATGTAATTTGTGTATATTTATGTAAATAAATATTTACATTTTATTTTTATCTTCACATTCACACATATTTTAGTTTGAGTTAAAATACCTTGACTTGTATTTAAAGATCATAGATTTAAATTTCATTCTACAAATGTATGGATGGATGATTGAAACG

Coding sequence (CDS)

ATGGAGGATGCTGTAGCTCGATTTCAAAGAACCGAAGAATCCACCTCAGTTTCTTCGGATCATCCCGAGAAAATTAAAGCCAAGCCACAAATTGCTCGTTCATTATCAGCTCCTCTGAATGTTAAGCCTATAGCTTTAAGGCGATTAGATTCAGTAGGTTTAATTCGGATAGTGTCTGCAGATCCACGTTGGATATTTGCCTTAGAAAGTGAACCTGCCGGTGATGATATTCCTGAGGATGAGGCGCTTAATGTGAATGCCGTTCTCTCTGTTTTCCTTTCTGCACTCACCGGATTGGGGCTTGTTATCAGCATAAACTCACTTCTGATGGAGTATCTTAAGTGGAGAAGAAGAAGGCAATTGAGACCTGCCAATCAACAGACGGGAACAAGGAGTTGGCCGCAATTACAACAGCAGCTATATGACAGTAATTACCATCAACAGCATGAGCAGCGGTTGGAGCAAGAACGCCATCAACCACATTCTCAGCAGCAAGCTATTGAAAATCAAAATATGGAGTCATTAGAGAGTGCCGATCAGGAAGGAACAACTATTCTGAGACAACAGCTCACTGAGGTGCCAAAGGTTAGTACCTATTCGGGACTAAGAAAATAG

Protein sequence

MEDAVARFQRTEESTSVSSDHPEKIKAKPQIARSLSAPLNVKPIALRRLDSVGLIRIVSADPRWIFALESEPAGDDIPEDEALNVNAVLSVFLSALTGLGLVISINSLLMEYLKWRRRRQLRPANQQTGTRSWPQLQQQLYDSNYHQQHEQRLEQERHQPHSQQQAIENQNMESLESADQEGTTILRQQLTEVPKVSTYSGLRK

Homology

[Close]

BLAST of CsGy4G020350 vs. NCBI nr
Match: XP_011653991.1 (PREDICTED: uncharacterized protein LOC101209559 [Cucumis sativus])

HSP 1 Score: 154.5 bits (389), Expect = 4.0e-34
Identity = 168/351 (47.86%), Postives = 171/351 (48.72%), Query Frame = 0


Query: 21  HPE--KIKAKPQIARSLSAPLNVKPIALRRLDSVGLIRIVSADPRWIFA-------LESE 80
           HP+  KIKAKPQIARSLSAPLNVKPIALRRLDSVGLIRIVSADPR+  A       +ESE
Sbjct: 167 HPDFSKIKAKPQIARSLSAPLNVKPIALRRLDSVGLIRIVSADPRYAGASLSQRKEIESE 226

Query: 81  PAGDDIPEDEA------------------------------------------------- 140
           PAGDDIPEDEA                                                 
Sbjct: 227 PAGDDIPEDEAVCRICFLELVEGGDTLKMECSCKGDLALAHKECAIKWFSIKGNKICDIC 286

Query: 141 ------------------------------------------------------------ 196
                                                                       
Sbjct: 287 KQDVENLPVTLLKLHSIRPGIRRPTITLQRTEVNHYRVWQHISVLVLVSMLAYFCFLEQL 346

[Close]

BLAST of CsGy4G020350 vs. NCBI nr
Match: XP_008464658.1 (PREDICTED: uncharacterized protein LOC103502492 [Cucumis melo])

HSP 1 Score: 141.0 bits (354), Expect = 4.6e-30
Identity = 148/351 (42.17%), Postives = 152/351 (43.30%), Query Frame = 0


Query: 21  HPE--KIKAKPQIARSLSAPLNVKPIALRRLDSVGLIRIVSADPRWIFA-------LESE 80
           HP+  K KAKP IARSLSAPLNVKP ALRRLDSVGLIR+VSADPR+  A       +ESE
Sbjct: 168 HPDVPKTKAKPHIARSLSAPLNVKPRALRRLDSVGLIRVVSADPRYAGASLSQGKEIESE 227

Query: 81  PAGDDIPEDEA------------------------------------------------- 140
           PAGDDIPEDEA                                                 
Sbjct: 228 PAGDDIPEDEAVCRICFLELVEGGDTLKMECSCKGDLALAHKECAIKWFSIKGNKICDIC 287

Query: 141 ------------------------------------------------------------ 196
                                                                       
Sbjct: 288 KQDVENLPVTLLKLHNIRPGIRRPTITLQRTEVNRYRIWQEISVLVLVSMLAYFCFLEQL 347

[Close]

BLAST of CsGy4G020350 vs. NCBI nr
Match: KGN54964.1 (hypothetical protein Csa_4G617320 [Cucumis sativus])

HSP 1 Score: 126.3 bits (316), Expect = 1.2e-25
Identity = 111/113 (98.23%), Postives = 111/113 (98.23%), Query Frame = 0


Query: 83  LNVNAVLSVFLSALTGLGLVISINSLLMEYLKWRRRRQLRPANQQTGTRSWPQLQQXXXX 142
           LNVNAVLSVFLSALTGLGLVISINSLLMEYLKWRRRRQLRPANQQTGTRSWPQLQQXXXX
Sbjct: 71  LNVNAVLSVFLSALTGLGLVISINSLLMEYLKWRRRRQLRPANQQTGTRSWPQLQQXXXX 130

Query: 143 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSADQEGTTILRQQLTEVPK 196
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  DQEGTTILRQQLTEVPK
Sbjct: 131 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQEGTTILRQQLTEVPK 183

[Close]

BLAST of CsGy4G020350 vs. NCBI nr
Match: KGN54963.1 (hypothetical protein Csa_4G617310 [Cucumis sativus])

HSP 1 Score: 102.1 bits (253), Expect = 2.4e-18
Identity = 57/72 (79.17%), Postives = 61/72 (84.72%), Query Frame = 0


Query: 21  HPE--KIKAKPQIARSLSAPLNVKPIALRRLDSVGLIRIVSADPRWIFA-------LESE 80
           HP+  KIKAKPQIARSLSAPLNVKPIALRRLDSVGLIRIVSADPR+  A       +ESE
Sbjct: 167 HPDFSKIKAKPQIARSLSAPLNVKPIALRRLDSVGLIRIVSADPRYAGASLSQRKEIESE 226

Query: 81  PAGDDIPEDEAL 84
           PAGDDIPEDEA+
Sbjct: 227 PAGDDIPEDEAV 238

[Close]

BLAST of CsGy4G020350 vs. NCBI nr
Match: PON88022.1 (hypothetical protein TorRG33x02_162240, partial [Trema orientalis])

HSP 1 Score: 87.0 bits (214), Expect = 7.8e-14
Identity = 53/108 (49.07%), Postives = 71/108 (65.74%), Query Frame = 0


Query: 25  IKAKPQIARSLSAPLNVKPIALRRLDSVGLIRIVSADPRWIFALESEPAG-DDIPEDEA- 84
           I+ K  + RSLS P+NVK  +L R+DS G+IR++SA PR        PA  + I +++A 
Sbjct: 165 IEIKHHMTRSLSVPVNVKARSLNRIDSGGMIRVISASPR--------PATVNGISQNDAH 224

Query: 85  ---LNVNAVLSVFLSALTGLGLVISINSLLMEYLKWRRRRQLRPANQQ 128
              LNVN +LSV LS+ TG G+ IS N+LL+EYL+WR  RQLR   QQ
Sbjct: 225 ATELNVNPILSVLLSSFTGFGIAISTNTLLVEYLRWRTSRQLRSTRQQ 264

[Close]

BLAST of CsGy4G020350 vs. TAIR10
Match: AT5G60580.2 (RING/U-box superfamily protein)

HSP 1 Score: 41.2 bits (95), Expect = 9.0e-04
Identity = 31/81 (38.27%), Postives = 44/81 (54.32%), Query Frame = 0


Query: 15  TSVSSDHPEKIKAKPQIARSLSAPLNVKPIALRRLDSVGLIRIVSADPRW----IFALES 74
           TSV+   P + K    IARS S PLN K ++L+ +DS    R++ + PR     +F+  S
Sbjct: 179 TSVAPQTPNR-KGSVHIARSRSVPLNDKELSLKGMDS--FFRVIPSTPRVKEGDVFSNAS 238

Query: 75  EPA--------GDDIPEDEAL 84
           E          G+DIPEDEA+
Sbjct: 239 EAGNTETGDADGEDIPEDEAV 256

[Close]

BLAST of CsGy4G020350 vs. TrEMBL
Match: tr|A0A1S3CM30|A0A1S3CM30_CUCME (uncharacterized protein LOC103502492 OS=Cucumis melo OX=3656 GN=LOC103502492 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 3.0e-30
Identity = 148/351 (42.17%), Postives = 152/351 (43.30%), Query Frame = 0


Query: 21  HPE--KIKAKPQIARSLSAPLNVKPIALRRLDSVGLIRIVSADPRWIFA-------LESE 80
           HP+  K KAKP IARSLSAPLNVKP ALRRLDSVGLIR+VSADPR+  A       +ESE
Sbjct: 168 HPDVPKTKAKPHIARSLSAPLNVKPRALRRLDSVGLIRVVSADPRYAGASLSQGKEIESE 227

Query: 81  PAGDDIPEDEA------------------------------------------------- 140
           PAGDDIPEDEA                                                 
Sbjct: 228 PAGDDIPEDEAVCRICFLELVEGGDTLKMECSCKGDLALAHKECAIKWFSIKGNKICDIC 287

Query: 141 ------------------------------------------------------------ 196
                                                                       
Sbjct: 288 KQDVENLPVTLLKLHNIRPGIRRPTITLQRTEVNRYRIWQEISVLVLVSMLAYFCFLEQL 347

[Close]

BLAST of CsGy4G020350 vs. TrEMBL
Match: tr|A0A0A0L1P6|A0A0A0L1P6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G617320 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 7.7e-26
Identity = 111/113 (98.23%), Postives = 111/113 (98.23%), Query Frame = 0


Query: 83  LNVNAVLSVFLSALTGLGLVISINSLLMEYLKWRRRRQLRPANQQTGTRSWPQLQQXXXX 142
           LNVNAVLSVFLSALTGLGLVISINSLLMEYLKWRRRRQLRPANQQTGTRSWPQLQQXXXX
Sbjct: 71  LNVNAVLSVFLSALTGLGLVISINSLLMEYLKWRRRRQLRPANQQTGTRSWPQLQQXXXX 130

Query: 143 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSADQEGTTILRQQLTEVPK 196
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  DQEGTTILRQQLTEVPK
Sbjct: 131 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQEGTTILRQQLTEVPK 183

[Close]

BLAST of CsGy4G020350 vs. TrEMBL
Match: tr|A0A0A0KZS5|A0A0A0KZS5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G617310 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.6e-18
Identity = 57/72 (79.17%), Postives = 61/72 (84.72%), Query Frame = 0


Query: 21  HPE--KIKAKPQIARSLSAPLNVKPIALRRLDSVGLIRIVSADPRWIFA-------LESE 80
           HP+  KIKAKPQIARSLSAPLNVKPIALRRLDSVGLIRIVSADPR+  A       +ESE
Sbjct: 167 HPDFSKIKAKPQIARSLSAPLNVKPIALRRLDSVGLIRIVSADPRYAGASLSQRKEIESE 226

Query: 81  PAGDDIPEDEAL 84
           PAGDDIPEDEA+
Sbjct: 227 PAGDDIPEDEAV 238

[Close]

BLAST of CsGy4G020350 vs. TrEMBL
Match: tr|A0A2P5ER78|A0A2P5ER78_9ROSA (Uncharacterized protein (Fragment) OS=Trema orientalis OX=63057 GN=TorRG33x02_162240 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 5.2e-14
Identity = 53/108 (49.07%), Postives = 71/108 (65.74%), Query Frame = 0


Query: 25  IKAKPQIARSLSAPLNVKPIALRRLDSVGLIRIVSADPRWIFALESEPAG-DDIPEDEA- 84
           I+ K  + RSLS P+NVK  +L R+DS G+IR++SA PR        PA  + I +++A 
Sbjct: 165 IEIKHHMTRSLSVPVNVKARSLNRIDSGGMIRVISASPR--------PATVNGISQNDAH 224

Query: 85  ---LNVNAVLSVFLSALTGLGLVISINSLLMEYLKWRRRRQLRPANQQ 128
              LNVN +LSV LS+ TG G+ IS N+LL+EYL+WR  RQLR   QQ
Sbjct: 225 ATELNVNPILSVLLSSFTGFGIAISTNTLLVEYLRWRTSRQLRSTRQQ 264

[Close]

BLAST of CsGy4G020350 vs. TrEMBL
Match: tr|A0A2P5AI90|A0A2P5AI90_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_330040 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 4.4e-13
Identity = 50/103 (48.54%), Postives = 68/103 (66.02%), Query Frame = 0


Query: 25  IKAKPQIARSLSAPLNVKPIALRRLDSVGLIRIVSADPRWIFALESEPAGDDIPEDEALN 84
           I+ K  + RSLS P+NVK  +L R+DS G+IR++SA PR   A  +  + +D    E LN
Sbjct: 177 IEIKHHMTRSLSVPVNVKARSLNRIDSGGMIRVISATPR--PATVNGTSQNDAHATE-LN 236

Query: 85  VNAVLSVFLSALTGLGLVISINSLLMEYLKWRRRRQLRPANQQ 128
           VN +LSV LS+ TG G+ IS N+LL+EYL+WR  R L+   QQ
Sbjct: 237 VNPILSVLLSSFTGFGIAISTNTLLVEYLRWRTSRHLQSTRQQ 276

The following BLAST results are available for this feature:

BLAST of CsGy4G020350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653991.1	4.0e-34	47.86	PREDICTED: uncharacterized protein LOC101209559 [Cucumis sativus]	[more]
XP_008464658.1	4.6e-30	42.17	PREDICTED: uncharacterized protein LOC103502492 [Cucumis melo]	[more]
KGN54964.1	1.2e-25	98.23	hypothetical protein Csa_4G617320 [Cucumis sativus]	[more]
KGN54963.1	2.4e-18	79.17	hypothetical protein Csa_4G617310 [Cucumis sativus]	[more]
PON88022.1	7.8e-14	49.07	hypothetical protein TorRG33x02_162240, partial [Trema orientalis]	[more]

BLAST of CsGy4G020350 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G60580.2	9.0e-04	38.27	RING/U-box superfamily protein	[more]

BLAST of CsGy4G020350 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy4G020350 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CM30\|A0A1S3CM30_CUCME	3.0e-30	42.17	uncharacterized protein LOC103502492 OS=Cucumis melo OX=3656 GN=LOC103502492 PE=...	[more]
tr\|A0A0A0L1P6\|A0A0A0L1P6_CUCSA	7.7e-26	98.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G617320 PE=4 SV=1	[more]
tr\|A0A0A0KZS5\|A0A0A0KZS5_CUCSA	1.6e-18	79.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G617310 PE=4 SV=1	[more]
tr\|A0A2P5ER78\|A0A2P5ER78_9ROSA	5.2e-14	49.07	Uncharacterized protein (Fragment) OS=Trema orientalis OX=63057 GN=TorRG33x02_16...	[more]
tr\|A0A2P5AI90\|A0A2P5AI90_PARAD	4.4e-13	48.54	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_330040 PE...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR033275	MARCH-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G020350.1	CsGy4G020350.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 145..183
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 147..161
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..183
None	No IPR available	PANTHER	PTHR23012:SF118	SUBFAMILY NOT NAMED	coord: 82..165
IPR033275	E3 ubiquitin-protein ligase MARCH-like	PANTHER	PTHR23012	MEMBRANE ASSOCIATED RING FINGER	coord: 82..165

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy4G020350	Cla023254	Watermelon (97103) v1	cgybwmB326
CsGy4G020350	Csa4G617310	Cucumber (Chinese Long) v2	cgybcuB166
CsGy4G020350	MELO3C026392	Melon (DHL92) v3.5.1	cgybmeB258
CsGy4G020350	ClCG11G016690	Watermelon (Charleston Gray)	cgybwcgB259
CsGy4G020350	CSPI04G21830	Wild cucumber (PI 183967)	cgybcpiB169
CsGy4G020350	CmaCh01G013290	Cucurbita maxima (Rimu)	cgybcmaB505
CsGy4G020350	CmoCh01G013840	Cucurbita moschata (Rifu)	cgybcmoB477
CsGy4G020350	Lsi04G019090	Bottle gourd (USVL1VR-Ls)	cgyblsiB263
CsGy4G020350	Cp4.1LG02g02750	Cucurbita pepo (Zucchini)	cgybcpeB547
CsGy4G020350	MELO3C026392.2	Melon (DHL92) v3.6.1	cgybmedB255
CsGy4G020350	CsaV3_4G032200	Cucumber (Chinese Long) v3	cgybcucB171
CsGy4G020350	Cla97C11G222620	Watermelon (97103) v2	cgybwmbB265
CsGy4G020350	Bhi09G002978	Wax gourd	cgybwgoB398
CsGy4G020350	Carg24709	Silver-seed gourd	carcgybB0636

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy4G020350	Cucumber (Gy14) v2	cgybcgybB121
CsGy4G020350	Cucurbita maxima (Rimu)	cgybcmaB470
CsGy4G020350	Cucurbita moschata (Rifu)	cgybcmoB437
CsGy4G020350	Cucurbita pepo (Zucchini)	cgybcpeB540
CsGy4G020350	Cucurbita pepo (Zucchini)	cgybcpeB566
CsGy4G020350	Cucumber (Chinese Long) v2	cgybcuB175
CsGy4G020350	Wild cucumber (PI 183967)	cgybcpiB177
CsGy4G020350	Silver-seed gourd	carcgybB1029
CsGy4G020350	Cucumber (Chinese Long) v3	cgybcucB176