CsGy4G020120 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTTTTGGGCATTATTGATCACTACCTTTAGTGGTCCTCCTCTGACATTGTTCTACTTTTTCCTTTTTCCTTATTGCTACAAAAGCTTTCAAGATCCCTTGTGAAATCCATAGCAACAACCTACAAGGGTGGCTTCACCATTCTGCTTTGTGCTTCTTTCATCAGAACCAAATAAACAATGCTATTTTTGCAGAAGACGGCTTTTACTTTATCCATCCCTCCAAGTTCAATACTTTTTATCTTTCTTCTTCTCACATTTCAACAAGTCAGCTCATCTCAACAGCACAACAAAAACGAAGACATGATTCATTCAAGCAAGAAAGACAACAGCCAAAAGGTTTCCATTTCTTCTTTCAGTTCATATTTTACATGTAATGAGAAAAGTGGTTTGTAATGTAATTAAAGCTGAAATTGATTACTGGTTATATAATGGCAACAGATGAGTTCCAGCCTATTGTTTGATATCACACTCCATGGATTTCTCCTATGGGCTTCAATGGGATTCCTTATGCCTGTTGGGATTCTTGTTATCAGAATGTCTAACAGAGAGCAATGTGGAAGAAAGCTGAAATATTACTTTTACATTCATACTATTCTACAGGCAAGTTCATCTAATCTTTTCTAGCAATATCATAATAGAATGAAAAACTGAGCCGGCCGAACAAAACTAATCGAACTGAGGAGAGGAGAGGTTAGTGTCAGTTTAAACAATTTTAAAAAATATTCAAAGACTTAAATCAACCGATCTTTTTTGTACTCGTTCATTACAGGAATCGGTTTGAACATTTAACTAAGTCGATCACAGTCGATTCAGTGTCGGTTTAGTCGGAAAACCAAACCCAACAAACCGATACTCACCCCTAAACAATACACTCAAATACTAAAATGAACGTTCTTTTTTGTTTTTGTTATTGTTTACATAAAGAAGAATCCTTTATAACTAAACAAACAATAAATGTAGAAGCATCATTAAGGCAATTAACTTTAACTTTTTATTAAACAAGCAAACAATCCACTTTTTCTTGCTCTACTTTATGAAATTAATTATAGTTAAAGAGAAACTATAAGGGTCCTGATTCTGAATATCTTATACATGAATATACTTGTGAAGAAAGAAAAGACAGGCATCATCACATCATAACTAATTAGAAACTCATAGCCAAATATCTGTAATGTTGAAAATCTAGCAGGTGTATGGATTATAATATTAGAGTTAGGTGAGATTTAGCTCTGGAAAGTCAAAATGATACAAAATTTGTATGACAGTTGAAGGATTTTGATTATACTTCAACCACAAAGATGGGGTCCAATTTGATGAATCTCACTTCAAGATCAAACAGTCGTGGTTCAAGTGATTATAATGCTAGTATTTTTCATTCTCACAATGAGTTGTTAAATCAGCCATTAATATCATATTATCTTGATTTGATTATGTTGAACAGATAGTGTCTGTATTACTAGTCACAGCAGGAGCAGTCATGTCTATCAAGAAATTCAACAATGCTTTCAATAATAATCACCAAAGGATAGGGATTGGCTTGTATGGGATGATCTGGTTACAGGGGTTGATTGGAATTGTAAGGCCAAAAAGGTAAACTTTCATATTTCATATGATTATAAAGCCTCGCTAGTTTCTTGGAAAGAGTCATTAAAGTCCCGTTTGATAACAATTTTATTTTTTAAAATTAAGTTTCACACTATCTTGTTCTATATTCAAAACCATTCTAAGACTAAGAGAGCGCTTGAGTTATAATGATATGTGTTTGGACTATAAACTATTTTAGTATGATCAGAAGTAAATAATAAATATTGTAGCAAAGAATAATAAAAGATGAATGCCAAATAGTAATAACAAATAAAACGCTTTGAAATAGTGTTTATTGTGAAATTTTTAAATAGGATTTAATGTATAATAGTCTTAGTCTTACTTAGTTCTGACTCGAAACACCCTTAAATGTTTGTTCGAGCCTAATTTTGGATTGATGAAGAATATTGGTTGTTGTAAAAATTGGTCAATGCATACAAGAAAAGACTTGAACAAAAACAACTTTTGCGAACCCTATTCATCAATCATGTCTCTAATAAATCTTTTGTTAAAAAATACTCTGCATATCAACTTATACCCCTAAACTTTAGATTTTTTTCAATTTAAACTATGATTTTTCATTAATTTACCCTTTCCAATTTTTGTTTAACCAATACTACGTTAAACTTATAATTCGAGTCAATTAAACTCCAAAATTTCAATAAGCCAATCAACTTAGACCCTTCGTTATGATTACCTTTGAAAATCATCAATATATTGATGCACAAATACATCTAAGCTTCTCTTCAAATGTAAAATTTTACAAAATTAGATTATTAGAGTGAATGTATGGACACAATTCTCCAATAAAAAAAATATAATTAGGAGTCTATTGATTCATTAACGTATGTCTAGGAGTTTACACACCAAAATGTAATAGAGAGGATACACTTGCAAAACTTCAAAGTTGGAATTAATTCAACCTCTAAGGTTGAGGGGTACAGATGAACATTTCAAAACCAAACAAACAAACGAGCAAAGTTTTCTTACTCCAAAATCAACTGCAGATTATCTAGATGGAGTAAACAGTCAGGACGATATTGATATCGACTTCTAAACTCTAAATAAACTCTTCATTGACTGTTGCAGGGGGTCTAAAACAAGAAGCGTATGGTTTTTCATACATTGGATGCTTGGGACAGCAGTATCTCTGCTAGGAGTTTTCAATGTATACTCAGGATTATTTGCATACCATGAGAAAACATCTCAAAGTATAAGAATTTGGACTATAATTTTTAGTGTTGAAATTTCTTTGATATCATTCTTTTACCTATTCCAAGACAAAGTAGAGTATATACAAAAGCAAGGAGTTACTTTGGGGAATGATTTGGTAGTACTGTCTCCAAATGACAAGCAAAAGGAACTTCCTACTGATCCATGCTGAAGAATTAAGGAGTAAATAAAATAGAGTTGTCAAAACGTTGCTTCTTTCTTTCTTTTTTTTTTTCTCTCTTTTCACTAACATGAGATTGGTGTTATTCTTCTTACTCATTTCTCTCTTCTTCTTGGGATTTGTATAGGAAAAGAGTGTGGTCTTTGTAAGAAATGGAAAATCTTTTGGGTTTGGAGGAGATGTTTTTTTGATAAGACAATGTGAGTTTTTTTCTGTTTTCTATTACAGATTTTCACATAATGGATACAAAGTTTTCTTTTTTTGAAGAATAAAGATGTGAGCACAGATACTGATATTGCTCTTTTAATAATATCACAAGATTAG CTTTTGGGCATTATTGATCACTACCTTTAGTGGTCCTCCTCTGACATTGTTCTACTTTTTCCTTTTTCCTTATTGCTACAAAAGCTTTCAAGATCCCTTGTGAAATCCATAGCAACAACCTACAAGGGTGGCTTCACCATTCTGCTTTGTGCTTCTTTCATCAGAACCAAATAAACAATGCTATTTTTGCAGAAGACGGCTTTTACTTTATCCATCCCTCCAAGTTCAATACTTTTTATCTTTCTTCTTCTCACATTTCAACAAGTCAGCTCATCTCAACAGCACAACAAAAACGAAGACATGATTCATTCAAGCAAGAAAGACAACAGCCAAAAGATAGTGTCTGTATTACTAGTCACAGCAGGAGCAGTCATGTCTATCAAGAAATTCAACAATGCTTTCAATAATAATCACCAAAGGATAGGGATTGGCTTGTATGGGATGATCTGGTTACAGGGGTTGATTGGAATTGTAAGGCCAAAAAGATTTTCACATAATGGATACAAAAATAAAGATGTGAGCACAGATACTGATATTGCTCTTTTAATAATATCACAAGATTAG ATGCTATTTTTGCAGAAGACGGCTTTTACTTTATCCATCCCTCCAAGTTCAATACTTTTTATCTTTCTTCTTCTCACATTTCAACAAGTCAGCTCATCTCAACAGCACAACAAAAACGAAGACATGATTCATTCAAGCAAGAAAGACAACAGCCAAAAGATAGTGTCTGTATTACTAGTCACAGCAGGAGCAGTCATGTCTATCAAGAAATTCAACAATGCTTTCAATAATAATCACCAAAGGATAGGGATTGGCTTGTATGGGATGATCTGGTTACAGGGGTTGATTGGAATTGTAAGGCCAAAAAGATTTTCACATAATGGATACAAAAATAAAGATGTGAGCACAGATACTGATATTGCTCTTTTAATAATATCACAAGATTAG MLFLQKTAFTLSIPPSSILFIFLLLTFQQVSSSQQHNKNEDMIHSSKKDNSQKIVSVLLVTAGAVMSIKKFNNAFNNNHQRIGIGLYGMIWLQGLIGIVRPKRFSHNGYKNKDVSTDTDIALLIISQD
BLAST of CsGy4G020120 vs. NCBI nr
Match: XP_004144633.1 (PREDICTED: cytochrome b561 domain-containing protein At4g18260 [Cucumis sativus] >KGN54933.1 hypothetical protein Csa_4G608090 [Cucumis sativus]) HSP 1 Score: 92.0 bits (227), Expect = 1.5e-15 Identity = 43/44 (97.73%), Postives = 43/44 (97.73%), Query Frame = 0
BLAST of CsGy4G020120 vs. NCBI nr
Match: XP_008465444.1 (PREDICTED: cytochrome b561 domain-containing protein At4g18260-like [Cucumis melo]) HSP 1 Score: 90.1 bits (222), Expect = 5.8e-15 Identity = 42/44 (95.45%), Postives = 43/44 (97.73%), Query Frame = 0
BLAST of CsGy4G020120 vs. NCBI nr
Match: XP_022940300.1 (cytochrome b561 domain-containing protein At4g18260-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 89.7 bits (221), Expect = 7.6e-15 Identity = 42/44 (95.45%), Postives = 42/44 (95.45%), Query Frame = 0
BLAST of CsGy4G020120 vs. NCBI nr
Match: XP_022940301.1 (cytochrome b561 domain-containing protein At4g18260-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 89.7 bits (221), Expect = 7.6e-15 Identity = 42/44 (95.45%), Postives = 42/44 (95.45%), Query Frame = 0
BLAST of CsGy4G020120 vs. NCBI nr
Match: XP_022981109.1 (cytochrome b561 domain-containing protein At4g18260-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 89.7 bits (221), Expect = 7.6e-15 Identity = 42/44 (95.45%), Postives = 42/44 (95.45%), Query Frame = 0
BLAST of CsGy4G020120 vs. TAIR10
Match: AT2G30890.1 (Cytochrome b561/ferric reductase transmembrane protein family) HSP 1 Score: 62.0 bits (149), Expect = 3.1e-10 Identity = 24/41 (58.54%), Postives = 34/41 (82.93%), Query Frame = 0
BLAST of CsGy4G020120 vs. TAIR10
Match: AT4G18260.1 (Cytochrome b561/ferric reductase transmembrane protein family) HSP 1 Score: 56.2 bits (134), Expect = 1.7e-08 Identity = 21/43 (48.84%), Postives = 32/43 (74.42%), Query Frame = 0
BLAST of CsGy4G020120 vs. Swiss-Prot
Match: sp|O80854|B561L_ARATH (Cytochrome b561 domain-containing protein At2g30890 OS=Arabidopsis thaliana OX=3702 GN=At2g30890 PE=2 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 5.5e-09 Identity = 24/41 (58.54%), Postives = 34/41 (82.93%), Query Frame = 0
BLAST of CsGy4G020120 vs. Swiss-Prot
Match: sp|Q0WPS2|B561M_ARATH (Cytochrome b561 domain-containing protein At4g18260 OS=Arabidopsis thaliana OX=3702 GN=At4g18260 PE=2 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 3.0e-07 Identity = 21/43 (48.84%), Postives = 32/43 (74.42%), Query Frame = 0
BLAST of CsGy4G020120 vs. TrEMBL
Match: tr|A0A0A0KZN5|A0A0A0KZN5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G608090 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 1.0e-15 Identity = 43/44 (97.73%), Postives = 43/44 (97.73%), Query Frame = 0
BLAST of CsGy4G020120 vs. TrEMBL
Match: tr|A0A1S3CNW7|A0A1S3CNW7_CUCME (cytochrome b561 domain-containing protein At4g18260-like OS=Cucumis melo OX=3656 GN=LOC103503052 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 3.8e-15 Identity = 42/44 (95.45%), Postives = 43/44 (97.73%), Query Frame = 0
BLAST of CsGy4G020120 vs. TrEMBL
Match: tr|A0A2P6S0D4|A0A2P6S0D4_ROSCH (Putative cytochrome b561/ferric reductase transmembrane OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0151991 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.2e-11 Identity = 34/44 (77.27%), Postives = 39/44 (88.64%), Query Frame = 0
BLAST of CsGy4G020120 vs. TrEMBL
Match: tr|A0A251Q2V7|A0A251Q2V7_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G176500 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.5e-11 Identity = 33/51 (64.71%), Postives = 40/51 (78.43%), Query Frame = 0
BLAST of CsGy4G020120 vs. TrEMBL
Match: tr|A0A2K2BE34|A0A2K2BE34_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G057900v3 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.5e-11 Identity = 33/44 (75.00%), Postives = 40/44 (90.91%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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