CsGy4G020120 (gene) Cucumber (Gy14) v2

NameCsGy4G020120
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptioncytochrome b561 domain-containing protein At4g18260-like
LocationChr4 : 27003429 .. 27006729 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTTGGGCATTATTGATCACTACCTTTAGTGGTCCTCCTCTGACATTGTTCTACTTTTTCCTTTTTCCTTATTGCTACAAAAGCTTTCAAGATCCCTTGTGAAATCCATAGCAACAACCTACAAGGGTGGCTTCACCATTCTGCTTTGTGCTTCTTTCATCAGAACCAAATAAACAATGCTATTTTTGCAGAAGACGGCTTTTACTTTATCCATCCCTCCAAGTTCAATACTTTTTATCTTTCTTCTTCTCACATTTCAACAAGTCAGCTCATCTCAACAGCACAACAAAAACGAAGACATGATTCATTCAAGCAAGAAAGACAACAGCCAAAAGGTTTCCATTTCTTCTTTCAGTTCATATTTTACATGTAATGAGAAAAGTGGTTTGTAATGTAATTAAAGCTGAAATTGATTACTGGTTATATAATGGCAACAGATGAGTTCCAGCCTATTGTTTGATATCACACTCCATGGATTTCTCCTATGGGCTTCAATGGGATTCCTTATGCCTGTTGGGATTCTTGTTATCAGAATGTCTAACAGAGAGCAATGTGGAAGAAAGCTGAAATATTACTTTTACATTCATACTATTCTACAGGCAAGTTCATCTAATCTTTTCTAGCAATATCATAATAGAATGAAAAACTGAGCCGGCCGAACAAAACTAATCGAACTGAGGAGAGGAGAGGTTAGTGTCAGTTTAAACAATTTTAAAAAATATTCAAAGACTTAAATCAACCGATCTTTTTTGTACTCGTTCATTACAGGAATCGGTTTGAACATTTAACTAAGTCGATCACAGTCGATTCAGTGTCGGTTTAGTCGGAAAACCAAACCCAACAAACCGATACTCACCCCTAAACAATACACTCAAATACTAAAATGAACGTTCTTTTTTGTTTTTGTTATTGTTTACATAAAGAAGAATCCTTTATAACTAAACAAACAATAAATGTAGAAGCATCATTAAGGCAATTAACTTTAACTTTTTATTAAACAAGCAAACAATCCACTTTTTCTTGCTCTACTTTATGAAATTAATTATAGTTAAAGAGAAACTATAAGGGTCCTGATTCTGAATATCTTATACATGAATATACTTGTGAAGAAAGAAAAGACAGGCATCATCACATCATAACTAATTAGAAACTCATAGCCAAATATCTGTAATGTTGAAAATCTAGCAGGTGTATGGATTATAATATTAGAGTTAGGTGAGATTTAGCTCTGGAAAGTCAAAATGATACAAAATTTGTATGACAGTTGAAGGATTTTGATTATACTTCAACCACAAAGATGGGGTCCAATTTGATGAATCTCACTTCAAGATCAAACAGTCGTGGTTCAAGTGATTATAATGCTAGTATTTTTCATTCTCACAATGAGTTGTTAAATCAGCCATTAATATCATATTATCTTGATTTGATTATGTTGAACAGATAGTGTCTGTATTACTAGTCACAGCAGGAGCAGTCATGTCTATCAAGAAATTCAACAATGCTTTCAATAATAATCACCAAAGGATAGGGATTGGCTTGTATGGGATGATCTGGTTACAGGGGTTGATTGGAATTGTAAGGCCAAAAAGGTAAACTTTCATATTTCATATGATTATAAAGCCTCGCTAGTTTCTTGGAAAGAGTCATTAAAGTCCCGTTTGATAACAATTTTATTTTTTAAAATTAAGTTTCACACTATCTTGTTCTATATTCAAAACCATTCTAAGACTAAGAGAGCGCTTGAGTTATAATGATATGTGTTTGGACTATAAACTATTTTAGTATGATCAGAAGTAAATAATAAATATTGTAGCAAAGAATAATAAAAGATGAATGCCAAATAGTAATAACAAATAAAACGCTTTGAAATAGTGTTTATTGTGAAATTTTTAAATAGGATTTAATGTATAATAGTCTTAGTCTTACTTAGTTCTGACTCGAAACACCCTTAAATGTTTGTTCGAGCCTAATTTTGGATTGATGAAGAATATTGGTTGTTGTAAAAATTGGTCAATGCATACAAGAAAAGACTTGAACAAAAACAACTTTTGCGAACCCTATTCATCAATCATGTCTCTAATAAATCTTTTGTTAAAAAATACTCTGCATATCAACTTATACCCCTAAACTTTAGATTTTTTTCAATTTAAACTATGATTTTTCATTAATTTACCCTTTCCAATTTTTGTTTAACCAATACTACGTTAAACTTATAATTCGAGTCAATTAAACTCCAAAATTTCAATAAGCCAATCAACTTAGACCCTTCGTTATGATTACCTTTGAAAATCATCAATATATTGATGCACAAATACATCTAAGCTTCTCTTCAAATGTAAAATTTTACAAAATTAGATTATTAGAGTGAATGTATGGACACAATTCTCCAATAAAAAAAATATAATTAGGAGTCTATTGATTCATTAACGTATGTCTAGGAGTTTACACACCAAAATGTAATAGAGAGGATACACTTGCAAAACTTCAAAGTTGGAATTAATTCAACCTCTAAGGTTGAGGGGTACAGATGAACATTTCAAAACCAAACAAACAAACGAGCAAAGTTTTCTTACTCCAAAATCAACTGCAGATTATCTAGATGGAGTAAACAGTCAGGACGATATTGATATCGACTTCTAAACTCTAAATAAACTCTTCATTGACTGTTGCAGGGGGTCTAAAACAAGAAGCGTATGGTTTTTCATACATTGGATGCTTGGGACAGCAGTATCTCTGCTAGGAGTTTTCAATGTATACTCAGGATTATTTGCATACCATGAGAAAACATCTCAAAGTATAAGAATTTGGACTATAATTTTTAGTGTTGAAATTTCTTTGATATCATTCTTTTACCTATTCCAAGACAAAGTAGAGTATATACAAAAGCAAGGAGTTACTTTGGGGAATGATTTGGTAGTACTGTCTCCAAATGACAAGCAAAAGGAACTTCCTACTGATCCATGCTGAAGAATTAAGGAGTAAATAAAATAGAGTTGTCAAAACGTTGCTTCTTTCTTTCTTTTTTTTTTTCTCTCTTTTCACTAACATGAGATTGGTGTTATTCTTCTTACTCATTTCTCTCTTCTTCTTGGGATTTGTATAGGAAAAGAGTGTGGTCTTTGTAAGAAATGGAAAATCTTTTGGGTTTGGAGGAGATGTTTTTTTGATAAGACAATGTGAGTTTTTTTCTGTTTTCTATTACAGATTTTCACATAATGGATACAAAGTTTTCTTTTTTTGAAGAATAAAGATGTGAGCACAGATACTGATATTGCTCTTTTAATAATATCACAAGATTAG

mRNA sequence

CTTTTGGGCATTATTGATCACTACCTTTAGTGGTCCTCCTCTGACATTGTTCTACTTTTTCCTTTTTCCTTATTGCTACAAAAGCTTTCAAGATCCCTTGTGAAATCCATAGCAACAACCTACAAGGGTGGCTTCACCATTCTGCTTTGTGCTTCTTTCATCAGAACCAAATAAACAATGCTATTTTTGCAGAAGACGGCTTTTACTTTATCCATCCCTCCAAGTTCAATACTTTTTATCTTTCTTCTTCTCACATTTCAACAAGTCAGCTCATCTCAACAGCACAACAAAAACGAAGACATGATTCATTCAAGCAAGAAAGACAACAGCCAAAAGATAGTGTCTGTATTACTAGTCACAGCAGGAGCAGTCATGTCTATCAAGAAATTCAACAATGCTTTCAATAATAATCACCAAAGGATAGGGATTGGCTTGTATGGGATGATCTGGTTACAGGGGTTGATTGGAATTGTAAGGCCAAAAAGATTTTCACATAATGGATACAAAAATAAAGATGTGAGCACAGATACTGATATTGCTCTTTTAATAATATCACAAGATTAG

Coding sequence (CDS)

ATGCTATTTTTGCAGAAGACGGCTTTTACTTTATCCATCCCTCCAAGTTCAATACTTTTTATCTTTCTTCTTCTCACATTTCAACAAGTCAGCTCATCTCAACAGCACAACAAAAACGAAGACATGATTCATTCAAGCAAGAAAGACAACAGCCAAAAGATAGTGTCTGTATTACTAGTCACAGCAGGAGCAGTCATGTCTATCAAGAAATTCAACAATGCTTTCAATAATAATCACCAAAGGATAGGGATTGGCTTGTATGGGATGATCTGGTTACAGGGGTTGATTGGAATTGTAAGGCCAAAAAGATTTTCACATAATGGATACAAAAATAAAGATGTGAGCACAGATACTGATATTGCTCTTTTAATAATATCACAAGATTAG

Protein sequence

MLFLQKTAFTLSIPPSSILFIFLLLTFQQVSSSQQHNKNEDMIHSSKKDNSQKIVSVLLVTAGAVMSIKKFNNAFNNNHQRIGIGLYGMIWLQGLIGIVRPKRFSHNGYKNKDVSTDTDIALLIISQD
BLAST of CsGy4G020120 vs. NCBI nr
Match: XP_004144633.1 (PREDICTED: cytochrome b561 domain-containing protein At4g18260 [Cucumis sativus] >KGN54933.1 hypothetical protein Csa_4G608090 [Cucumis sativus])

HSP 1 Score: 92.0 bits (227), Expect = 1.5e-15
Identity = 43/44 (97.73%), Postives = 43/44 (97.73%), Query Frame = 0

Query: 62  AGAVMSIKKFNNAFNNNHQRIGIGLYGMIWLQGLIGIVRPKRFS 106
           AGAVMSIKKFNNAFNNNHQRIGIGLYGMIWLQGLIGIVRPKR S
Sbjct: 116 AGAVMSIKKFNNAFNNNHQRIGIGLYGMIWLQGLIGIVRPKRGS 159

BLAST of CsGy4G020120 vs. NCBI nr
Match: XP_008465444.1 (PREDICTED: cytochrome b561 domain-containing protein At4g18260-like [Cucumis melo])

HSP 1 Score: 90.1 bits (222), Expect = 5.8e-15
Identity = 42/44 (95.45%), Postives = 43/44 (97.73%), Query Frame = 0

Query: 62  AGAVMSIKKFNNAFNNNHQRIGIGLYGMIWLQGLIGIVRPKRFS 106
           AGAVMSIKKFNNAFNN+HQRIGIGLYGMIWLQGLIGIVRPKR S
Sbjct: 116 AGAVMSIKKFNNAFNNSHQRIGIGLYGMIWLQGLIGIVRPKRGS 159

BLAST of CsGy4G020120 vs. NCBI nr
Match: XP_022940300.1 (cytochrome b561 domain-containing protein At4g18260-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 89.7 bits (221), Expect = 7.6e-15
Identity = 42/44 (95.45%), Postives = 42/44 (95.45%), Query Frame = 0

Query: 62  AGAVMSIKKFNNAFNNNHQRIGIGLYGMIWLQGLIGIVRPKRFS 106
           AGAVMSIKKFNNAFNNNHQRIGIGLYGMIWLQ LIGIVRPKR S
Sbjct: 111 AGAVMSIKKFNNAFNNNHQRIGIGLYGMIWLQALIGIVRPKRGS 154

BLAST of CsGy4G020120 vs. NCBI nr
Match: XP_022940301.1 (cytochrome b561 domain-containing protein At4g18260-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 89.7 bits (221), Expect = 7.6e-15
Identity = 42/44 (95.45%), Postives = 42/44 (95.45%), Query Frame = 0

Query: 62  AGAVMSIKKFNNAFNNNHQRIGIGLYGMIWLQGLIGIVRPKRFS 106
           AGAVMSIKKFNNAFNNNHQRIGIGLYGMIWLQ LIGIVRPKR S
Sbjct: 110 AGAVMSIKKFNNAFNNNHQRIGIGLYGMIWLQALIGIVRPKRGS 153

BLAST of CsGy4G020120 vs. NCBI nr
Match: XP_022981109.1 (cytochrome b561 domain-containing protein At4g18260-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 89.7 bits (221), Expect = 7.6e-15
Identity = 42/44 (95.45%), Postives = 42/44 (95.45%), Query Frame = 0

Query: 62  AGAVMSIKKFNNAFNNNHQRIGIGLYGMIWLQGLIGIVRPKRFS 106
           AGAVMSIKKFNNAFNNNHQRIGIGLYGMIWLQ LIGIVRPKR S
Sbjct: 111 AGAVMSIKKFNNAFNNNHQRIGIGLYGMIWLQALIGIVRPKRGS 154

BLAST of CsGy4G020120 vs. TAIR10
Match: AT2G30890.1 (Cytochrome b561/ferric reductase transmembrane protein family)

HSP 1 Score: 62.0 bits (149), Expect = 3.1e-10
Identity = 24/41 (58.54%), Postives = 34/41 (82.93%), Query Frame = 0

Query: 63  GAVMSIKKFNNAFNNNHQRIGIGLYGMIWLQGLIGIVRPKR 104
           GAVMS+  FNN+F+N+HQ++GIGLY ++W Q L+G +RP R
Sbjct: 109 GAVMSVINFNNSFSNHHQQLGIGLYVIVWFQALLGFLRPPR 149

BLAST of CsGy4G020120 vs. TAIR10
Match: AT4G18260.1 (Cytochrome b561/ferric reductase transmembrane protein family)

HSP 1 Score: 56.2 bits (134), Expect = 1.7e-08
Identity = 21/43 (48.84%), Postives = 32/43 (74.42%), Query Frame = 0

Query: 63  GAVMSIKKFNNAFNNNHQRIGIGLYGMIWLQGLIGIVRPKRFS 106
           GA++S++   N+F+NNHQR+G+ LY  +WLQ L G+ +P R S
Sbjct: 117 GAILSLRTLENSFDNNHQRLGLALYAAMWLQFLTGVFKPSRGS 159

BLAST of CsGy4G020120 vs. Swiss-Prot
Match: sp|O80854|B561L_ARATH (Cytochrome b561 domain-containing protein At2g30890 OS=Arabidopsis thaliana OX=3702 GN=At2g30890 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 5.5e-09
Identity = 24/41 (58.54%), Postives = 34/41 (82.93%), Query Frame = 0

Query: 63  GAVMSIKKFNNAFNNNHQRIGIGLYGMIWLQGLIGIVRPKR 104
           GAVMS+  FNN+F+N+HQ++GIGLY ++W Q L+G +RP R
Sbjct: 109 GAVMSVINFNNSFSNHHQQLGIGLYVIVWFQALLGFLRPPR 149

BLAST of CsGy4G020120 vs. Swiss-Prot
Match: sp|Q0WPS2|B561M_ARATH (Cytochrome b561 domain-containing protein At4g18260 OS=Arabidopsis thaliana OX=3702 GN=At4g18260 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.0e-07
Identity = 21/43 (48.84%), Postives = 32/43 (74.42%), Query Frame = 0

Query: 63  GAVMSIKKFNNAFNNNHQRIGIGLYGMIWLQGLIGIVRPKRFS 106
           GA++S++   N+F+NNHQR+G+ LY  +WLQ L G+ +P R S
Sbjct: 117 GAILSLRTLENSFDNNHQRLGLALYAAMWLQFLTGVFKPSRGS 159

BLAST of CsGy4G020120 vs. TrEMBL
Match: tr|A0A0A0KZN5|A0A0A0KZN5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G608090 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.0e-15
Identity = 43/44 (97.73%), Postives = 43/44 (97.73%), Query Frame = 0

Query: 62  AGAVMSIKKFNNAFNNNHQRIGIGLYGMIWLQGLIGIVRPKRFS 106
           AGAVMSIKKFNNAFNNNHQRIGIGLYGMIWLQGLIGIVRPKR S
Sbjct: 116 AGAVMSIKKFNNAFNNNHQRIGIGLYGMIWLQGLIGIVRPKRGS 159

BLAST of CsGy4G020120 vs. TrEMBL
Match: tr|A0A1S3CNW7|A0A1S3CNW7_CUCME (cytochrome b561 domain-containing protein At4g18260-like OS=Cucumis melo OX=3656 GN=LOC103503052 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.8e-15
Identity = 42/44 (95.45%), Postives = 43/44 (97.73%), Query Frame = 0

Query: 62  AGAVMSIKKFNNAFNNNHQRIGIGLYGMIWLQGLIGIVRPKRFS 106
           AGAVMSIKKFNNAFNN+HQRIGIGLYGMIWLQGLIGIVRPKR S
Sbjct: 116 AGAVMSIKKFNNAFNNSHQRIGIGLYGMIWLQGLIGIVRPKRGS 159

BLAST of CsGy4G020120 vs. TrEMBL
Match: tr|A0A2P6S0D4|A0A2P6S0D4_ROSCH (Putative cytochrome b561/ferric reductase transmembrane OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0151991 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.2e-11
Identity = 34/44 (77.27%), Postives = 39/44 (88.64%), Query Frame = 0

Query: 62  AGAVMSIKKFNNAFNNNHQRIGIGLYGMIWLQGLIGIVRPKRFS 106
           AGAVMS + FNN+FNN HQRIG+GLYG+IWLQ LIGIVRP+R S
Sbjct: 103 AGAVMSFRNFNNSFNNRHQRIGVGLYGLIWLQALIGIVRPQRGS 146

BLAST of CsGy4G020120 vs. TrEMBL
Match: tr|A0A251Q2V7|A0A251Q2V7_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G176500 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.5e-11
Identity = 33/51 (64.71%), Postives = 40/51 (78.43%), Query Frame = 0

Query: 62  AGAVMSIKKFNNAFNNNHQRIGIGLYGMIWLQGLIGIVRPKRFSHNGYKNK 113
           AGAVMS + FNN+FNN HQR+G+GLYG+IWLQ LIG VRP+R    G + K
Sbjct: 109 AGAVMSFRNFNNSFNNKHQRVGVGLYGLIWLQALIGFVRPQRVEGLGGRRK 159

BLAST of CsGy4G020120 vs. TrEMBL
Match: tr|A0A2K2BE34|A0A2K2BE34_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G057900v3 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.5e-11
Identity = 33/44 (75.00%), Postives = 40/44 (90.91%), Query Frame = 0

Query: 62  AGAVMSIKKFNNAFNNNHQRIGIGLYGMIWLQGLIGIVRPKRFS 106
           AGAVMSIK FNN+F+N+HQRIG+GLYGM+WLQ LIG +RP+R S
Sbjct: 110 AGAVMSIKNFNNSFDNHHQRIGVGLYGMVWLQALIGFLRPRRGS 153

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004144633.11.5e-1597.73PREDICTED: cytochrome b561 domain-containing protein At4g18260 [Cucumis sativus]... [more]
XP_008465444.15.8e-1595.45PREDICTED: cytochrome b561 domain-containing protein At4g18260-like [Cucumis mel... [more]
XP_022940300.17.6e-1595.45cytochrome b561 domain-containing protein At4g18260-like isoform X1 [Cucurbita m... [more]
XP_022940301.17.6e-1595.45cytochrome b561 domain-containing protein At4g18260-like isoform X2 [Cucurbita m... [more]
XP_022981109.17.6e-1595.45cytochrome b561 domain-containing protein At4g18260-like isoform X1 [Cucurbita m... [more]
Match NameE-valueIdentityDescription
AT2G30890.13.1e-1058.54Cytochrome b561/ferric reductase transmembrane protein family[more]
AT4G18260.11.7e-0848.84Cytochrome b561/ferric reductase transmembrane protein family[more]
Match NameE-valueIdentityDescription
sp|O80854|B561L_ARATH5.5e-0958.54Cytochrome b561 domain-containing protein At2g30890 OS=Arabidopsis thaliana OX=3... [more]
sp|Q0WPS2|B561M_ARATH3.0e-0748.84Cytochrome b561 domain-containing protein At4g18260 OS=Arabidopsis thaliana OX=3... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0KZN5|A0A0A0KZN5_CUCSA1.0e-1597.73Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G608090 PE=4 SV=1[more]
tr|A0A1S3CNW7|A0A1S3CNW7_CUCME3.8e-1595.45cytochrome b561 domain-containing protein At4g18260-like OS=Cucumis melo OX=3656... [more]
tr|A0A2P6S0D4|A0A2P6S0D4_ROSCH1.2e-1177.27Putative cytochrome b561/ferric reductase transmembrane OS=Rosa chinensis OX=746... [more]
tr|A0A251Q2V7|A0A251Q2V7_PRUPE1.5e-1164.71Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G176500 PE=4 SV=1[more]
tr|A0A2K2BE34|A0A2K2BE34_POPTR1.5e-1175.00Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G057900v3 PE=... [more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy4G020120.1CsGy4G020120.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR44744FAMILY NOT NAMEDcoord: 52..106
NoneNo IPR availablePANTHERPTHR44744:SF1SUBFAMILY NOT NAMEDcoord: 52..106