CsGy4G019530 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy4G019530
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	exopolygalacturonase-like
Location	Chr4 : 26037222 .. 26039444 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAAGAAATCTTAGCCTCATTCAAATCCTTCTCTTAGTATTTGCTTGGCAATGTTGTGCTGTCATTTTCGATGACGTCACCGGCACTAAAAATCTTCTCAAGGGGATCGTACCAACAGCAAATGAGCAGTTCCTTCGTCCTGCAGAAGCACCCCGACGTCTTGGCTTCAGTACTCTTTCCAACAATGGCCGCACGGTGAATGACATTAAGGCAAGTGTTGATCTAAATGAGAATGGTGGTTCAGTTTTTGATGTTACAAAACATGGAGCTAAAGCTGATGGAAAGACTGATGATGCACAGGTGAGAAATATCAACACACCTAACTTCAAACCTTTTAATTTGAGTTAATTATCTTTAAATTGAGGACTATAGGAAATTGTATATATTTTTTGCTATTAAATTCTACCGTCATATTATTCGAAATCGATATCAATTTTTCTTGTATTCTATTTGGGTGGAAATGGATGGTACAATTATTTCAACATTTTTTTGGCAAAAAGAGTTACAATTTGTTTTTATTTTCCATTTGGCAGGCATTCATGACAACGTGGATTGCAGCTTGTCGGAACACAGTCGGTCCGGCGAAGTTCTTAATCCCACAACGCACATTTCTGGTGGGTCCGGTGACTTTCGCCGGTCCGTGCAAAAGCTTTCCGATCACCCTCGAAAATCAAGGAACTGTAAAGGCCACCATCGATATTAGTGCATATTCATCTCCAGAATGGTTCTCCATTGAAGATATTACTGGTTTCATCCTCACCGGCTCCGGTGTCTTTGACGGCCAAGGCCTCTCTGTTTGGCCCTACAACGATTGCAAGAAAAACAACTTATGCCAAATTCTTCCAATCGTAACTATATATTTTTCCTTTCATTCTAAATTACAAGTGTTTTTACACTCTAAACTTTACGATTTGTGTCTAACACGTAGCTAAAATAACCTGCAATAGACCAAATATGTTTAAAAATGAAAAATTATTTTAAATTACAAAAACTATGAAGATTATTTAGAAAATATATAGCAAAATTTCATGTATCCTATCTATAAGAATTTAAAATTTTACTTTAAATATTTTTTTATTTATTATGCTATATTCGAAAATGTCTTTTCAACCATGGTGAGTAATTCTTGGCTTTTTTTTTATTTTTTTGGCAGTCGATTAAATTCACGAGATTAAATCACACGATTGTTGATGGGCTCACTTCGATAAATAGCATGGGGTTTCACACGTCTGTATTCTACTGCTACAATTTCACTGCTACTAACATGAAAATTATAGCTCCACATAATAGTCCCAACACCGATGGAATGCACCTTAGCACCTCAAAATTGGTCACCATTGCCAACAGTGTCATTGGCACCGGTGATGATTGTGTCTCCATTGGCCATAGTACTGAGAATATCACCGTCACCAACGTCACTTGCGGCCCTGGACATGGCCTTAGGTAAATAGTGCACTTTTTAAAAAAGAAATTAAAGATTAAGTAGACACAAAGGAAAACATCTGAAAGCTAATTTCCATTTTTCATCTTTTTCAGTGTGGGCAGCTTGGGCAAGTACTCGAAAGAAAAGGGTGTCTACGACGTTCTAGTAAAGAACTGCACCATTTTCAATGCCACCAATGGTGCCAGAATCAAGACTTGGGCTAGCCCTATCTCGGGGTTAGCCTCGAGAATTATCTTTGAAGACATTGTAATGAACAACGTAAAAAATCCTATAATTATCGATCAAACCTACGGCACTAAGAAGAAGAAGGTAAATAAGAACAATAAAAGCTAACCATGTTATTGGTTTAATCCAGTCGAGATGTCAAGAGCACAAAATGAGAGCGTTAAGAAAATTTCAATCTAAAATTGAGATGTTCAAATGCACTATCTAATGTTTCTTCTTCTTGTATATCTTATTAAAAGAAACGGATGAACTTAACATTTAGAGTTTAATAGTGATTTAACGATAACGTGTTACTAAACTTACATGTGCATGCAGGAATCAAATTGGAAGGTTAGCAACGTACAGTTCAAGAACATTCGGGAACATCGACAACGAATGTGGCAGTGTTGTTAGAGTGCAGCAAGTTGTTTCCATGCGAGGGGGTGGAGTTGAGGGACATTAACTTGAGTTATGGAGGCATCAACTTGAGAAACACAACCATTGTTTCTTCATGTTCAAATGCAAAGATTGCTACTTTTGGCGTTCAAAACCCACCACCATGTGTTGTATAA

mRNA sequence

ATGACAAGAAATCTTAGCCTCATTCAAATCCTTCTCTTAGTATTTGCTTGGCAATGTTGTGCTGTCATTTTCGATGACGTCACCGGCACTAAAAATCTTCTCAAGGGGATCGTACCAACAGCAAATGAGCAGTTCCTTCGTCCTGCAGAAGCACCCCGACGTCTTGGCTTCAGTACTCTTTCCAACAATGGCCGCACGGTGAATGACATTAAGGCAAGTGTTGATCTAAATGAGAATGGTGGTTCAGTTTTTGATGTTACAAAACATGGAGCTAAAGCTGATGGAAAGACTGATGATGCACAGGCATTCATGACAACGTGGATTGCAGCTTGTCGGAACACAGTCGGTCCGGCGAAGTTCTTAATCCCACAACGCACATTTCTGGTGGGTCCGGTGACTTTCGCCGGTCCGTGCAAAAGCTTTCCGATCACCCTCGAAAATCAAGGAACTGTAAAGGCCACCATCGATATTAGTGCATATTCATCTCCAGAATGGTTCTCCATTGAAGATATTACTGGTTTCATCCTCACCGGCTCCGGTGTCTTTGACGGCCAAGGCCTCTCTGTTTGGCCCTACAACGATTGCAAGAAAAACAACTTATGCCAAATTCTTCCAATCTCGATTAAATTCACGAGATTAAATCACACGATTGTTGATGGGCTCACTTCGATAAATAGCATGGGGTTTCACACGTCTGTATTCTACTGCTACAATTTCACTGCTACTAACATGAAAATTATAGCTCCACATAATAGTCCCAACACCGATGGAATGCACCTTAGCACCTCAAAATTGGTCACCATTGCCAACAGTGTCATTGGCACCGGTGATGATTGTGTCTCCATTGGCCATAGTACTGAGAATATCACCGTCACCAACGTCACTTGCGGCCCTGGACATGGCCTTAGTGTGGGCAGCTTGGGCAAGTACTCGAAAGAAAAGGGTGTCTACGACGTTCTAGTAAAGAACTGCACCATTTTCAATGCCACCAATGGTGCCAGAATCAAGACTTGGGCTAGCCCTATCTCGGGGTTAGCCTCGAGAATTATCTTTGAAGACATTGTAATGAACAACGTAAAAAATCCTATAATTATCGATCAAACCTACGGCACTAAGAAGAAGAAGCAACGTACAGTTCAAGAACATTCGGGAACATCGACAACGAATGTGGCAGTGTTGTTAGAGTGCAGCAAGTTGTTTCCATGCGAGGGGGTGGAGTTGAGGGACATTAACTTGAGTTATGGAGGCATCAACTTGAGAAACACAACCATTGTTTCTTCATGTTCAAATGCAAAGATTGCTACTTTTGGCGTTCAAAACCCACCACCATGTGTTGTATAA

Coding sequence (CDS)

ATGACAAGAAATCTTAGCCTCATTCAAATCCTTCTCTTAGTATTTGCTTGGCAATGTTGTGCTGTCATTTTCGATGACGTCACCGGCACTAAAAATCTTCTCAAGGGGATCGTACCAACAGCAAATGAGCAGTTCCTTCGTCCTGCAGAAGCACCCCGACGTCTTGGCTTCAGTACTCTTTCCAACAATGGCCGCACGGTGAATGACATTAAGGCAAGTGTTGATCTAAATGAGAATGGTGGTTCAGTTTTTGATGTTACAAAACATGGAGCTAAAGCTGATGGAAAGACTGATGATGCACAGGCATTCATGACAACGTGGATTGCAGCTTGTCGGAACACAGTCGGTCCGGCGAAGTTCTTAATCCCACAACGCACATTTCTGGTGGGTCCGGTGACTTTCGCCGGTCCGTGCAAAAGCTTTCCGATCACCCTCGAAAATCAAGGAACTGTAAAGGCCACCATCGATATTAGTGCATATTCATCTCCAGAATGGTTCTCCATTGAAGATATTACTGGTTTCATCCTCACCGGCTCCGGTGTCTTTGACGGCCAAGGCCTCTCTGTTTGGCCCTACAACGATTGCAAGAAAAACAACTTATGCCAAATTCTTCCAATCTCGATTAAATTCACGAGATTAAATCACACGATTGTTGATGGGCTCACTTCGATAAATAGCATGGGGTTTCACACGTCTGTATTCTACTGCTACAATTTCACTGCTACTAACATGAAAATTATAGCTCCACATAATAGTCCCAACACCGATGGAATGCACCTTAGCACCTCAAAATTGGTCACCATTGCCAACAGTGTCATTGGCACCGGTGATGATTGTGTCTCCATTGGCCATAGTACTGAGAATATCACCGTCACCAACGTCACTTGCGGCCCTGGACATGGCCTTAGTGTGGGCAGCTTGGGCAAGTACTCGAAAGAAAAGGGTGTCTACGACGTTCTAGTAAAGAACTGCACCATTTTCAATGCCACCAATGGTGCCAGAATCAAGACTTGGGCTAGCCCTATCTCGGGGTTAGCCTCGAGAATTATCTTTGAAGACATTGTAATGAACAACGTAAAAAATCCTATAATTATCGATCAAACCTACGGCACTAAGAAGAAGAAGCAACGTACAGTTCAAGAACATTCGGGAACATCGACAACGAATGTGGCAGTGTTGTTAGAGTGCAGCAAGTTGTTTCCATGCGAGGGGGTGGAGTTGAGGGACATTAACTTGAGTTATGGAGGCATCAACTTGAGAAACACAACCATTGTTTCTTCATGTTCAAATGCAAAGATTGCTACTTTTGGCGTTCAAAACCCACCACCATGTGTTGTATAA

Protein sequence

MTRNLSLIQILLLVFAWQCCAVIFDDVTGTKNLLKGIVPTANEQFLRPAEAPRRLGFSTLSNNGRTVNDIKASVDLNENGGSVFDVTKHGAKADGKTDDAQAFMTTWIAACRNTVGPAKFLIPQRTFLVGPVTFAGPCKSFPITLENQGTVKATIDISAYSSPEWFSIEDITGFILTGSGVFDGQGLSVWPYNDCKKNNLCQILPISIKFTRLNHTIVDGLTSINSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIGHSTENITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPISGLASRIIFEDIVMNNVKNPIIIDQTYGTKKKKQRTVQEHSGTSTTNVAVLLECSKLFPCEGVELRDINLSYGGINLRNTTIVSSCSNAKIATFGVQNPPPCVV

Homology

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BLAST of CsGy4G019530 vs. NCBI nr
Match: XP_011656188.1 (PREDICTED: exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 826.6 bits (2134), Expect = 4.0e-236
Identity = 409/453 (90.29%), Postives = 424/453 (93.60%), Query Frame = 0


Query: 1   MTRNLSLIQILLLVFAWQCCAVIFDDVTGTKNLLKGIVPTANEQFLRPAEAPRRLGFSTL 60
           MTRNLSLIQI+LL FAWQ CAVIF+D+TGT+NLLKGIVPT N+QFLRPAEAPR LGF+TL
Sbjct: 1   MTRNLSLIQIILLEFAWQSCAVIFNDITGTQNLLKGIVPTTNKQFLRPAEAPRHLGFNTL 60

Query: 61  SNNGRTVNDIKASVDLNENGGSVFDVTKHGAKADGKTDDAQAFMTTWIAACRNTVGPAKF 120
            + G TVNDI A+VDLNENGGSVFDVTKHGAKADGKTDDAQAFMTTWIAACRNTVGPAKF
Sbjct: 61  PDIGGTVNDINANVDLNENGGSVFDVTKHGAKADGKTDDAQAFMTTWIAACRNTVGPAKF 120

Query: 121 LIPQRTFLVGPVTFAGPCKSFPITLENQGTVKATIDISAYSSPEWFSIEDITGFILTGSG 180
           LIPQ TFLVGPVTFAGPCKS+PITLENQGTVKAT DISAYSSPEWFS+EDITGFILTGSG
Sbjct: 121 LIPQGTFLVGPVTFAGPCKSYPITLENQGTVKATTDISAYSSPEWFSLEDITGFILTGSG 180

Query: 181 VFDGQGLSVWPYNDCKKNNLCQILPISIKFTRLNHTIVDGLTSINSMGFHTSVFYCYNFT 240
           VFDGQGLSVWPYNDCKKNNLCQ+LPISIKFTRLNHTIVDGLTSINSMGFHTSVFYCYNFT
Sbjct: 181 VFDGQGLSVWPYNDCKKNNLCQLLPISIKFTRLNHTIVDGLTSINSMGFHTSVFYCYNFT 240

Query: 241 ATNMKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIGHSTENITVTNVTCGPGH 300
           ATNMKIIAPHNSPNTDGMHLSTSKLVTIANS+IGTGDDCVSIGHSTENITVTNVTCGPGH
Sbjct: 241 ATNMKIIAPHNSPNTDGMHLSTSKLVTIANSIIGTGDDCVSIGHSTENITVTNVTCGPGH 300

Query: 301 GLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPISGLASRIIFEDIVMNNVK 360
           GL   SLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASP+SGLASRIIFEDIVM NVK
Sbjct: 301 GL---SLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPVSGLASRIIFEDIVMYNVK 360

Query: 361 NPIIIDQTYGTKKKKQRT-------VQEHSGTSTTNVAVLLECSKLFPCEGVELRDINLS 420
           NPIIIDQTYGTKKKK+          +   GTSTTNVAVLLECSKLFPCEGVELRDINLS
Sbjct: 361 NPIIIDQTYGTKKKKESNWKVSNVQFKNIRGTSTTNVAVLLECSKLFPCEGVELRDINLS 420

Query: 421 YGGINLRNTTIVSSCSNAKIATFGVQNPPPCVV 447
           YGG NLRNTTIVSSCSNAKIATFGVQ PPPCVV
Sbjct: 421 YGGTNLRNTTIVSSCSNAKIATFGVQKPPPCVV 450

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BLAST of CsGy4G019530 vs. NCBI nr
Match: KGN50738.1 (hypothetical protein Csa_5G222970 [Cucumis sativus])

HSP 1 Score: 769.6 bits (1986), Expect = 5.7e-219
Identity = 381/420 (90.71%), Postives = 392/420 (93.33%), Query Frame = 0


Query: 34  LKGIVPTANEQFLRPAEAPRRLGFSTLSNNGRTVNDIKASVDLNENGGSVFDVTKHGAKA 93
           L GIVPT N+QFLRPAEAPR LGF+TL + G TVNDI A+VDLNENGGSVFDVTKHGAKA
Sbjct: 6   LYGIVPTTNKQFLRPAEAPRHLGFNTLPDIGGTVNDINANVDLNENGGSVFDVTKHGAKA 65

Query: 94  DGKTDDAQAFMTTWIAACRNTVGPAKFLIPQRTFLVGPVTFAGPCKSFPITLENQGTVKA 153
           DGKTDDAQAFMTTWIAACRNTVGPAKFLIPQ TFLVGPVTFAGPCKS+PITLENQGTVKA
Sbjct: 66  DGKTDDAQAFMTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSYPITLENQGTVKA 125

Query: 154 TIDISAYSSPEWFSIEDITGFILTGSGVFDGQGLSVWPYNDCKKNNLCQILPISIKFTRL 213
           T DISAYSSPEWFS+EDITGFILTGSGVFDGQGLSVWPYNDCKKNNLCQ+LPISIKFTRL
Sbjct: 126 TTDISAYSSPEWFSLEDITGFILTGSGVFDGQGLSVWPYNDCKKNNLCQLLPISIKFTRL 185

Query: 214 NHTIVDGLTSINSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSVI 273
           NHTIVDGLTSINSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANS+I
Sbjct: 186 NHTIVDGLTSINSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSII 245

Query: 274 GTGDDCVSIGHSTENITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGA 333
           GTGDDCVSIGHSTENITVTNVTCGPGHGL   SLGKYSKEKGVYDVLVKNCTIFNATNGA
Sbjct: 246 GTGDDCVSIGHSTENITVTNVTCGPGHGL---SLGKYSKEKGVYDVLVKNCTIFNATNGA 305

Query: 334 RIKTWASPISGLASRIIFEDIVMNNVKNPIIIDQTYGTKKKKQRT-------VQEHSGTS 393
           RIKTWASP+SGLASRIIFEDIVM NVKNPIIIDQTYGTKKKK+          +   GTS
Sbjct: 306 RIKTWASPVSGLASRIIFEDIVMYNVKNPIIIDQTYGTKKKKESNWKVSNVQFKNIRGTS 365

Query: 394 TTNVAVLLECSKLFPCEGVELRDINLSYGGINLRNTTIVSSCSNAKIATFGVQNPPPCVV 447
           TTNVAVLLECSKLFPCEGVELRDINLSYGG NLRNTTIVSSCSNAKIATFGVQ PPPCVV
Sbjct: 366 TTNVAVLLECSKLFPCEGVELRDINLSYGGTNLRNTTIVSSCSNAKIATFGVQKPPPCVV 422

[Close]

BLAST of CsGy4G019530 vs. NCBI nr
Match: XP_008451635.1 (PREDICTED: exopolygalacturonase-like [Cucumis melo])

HSP 1 Score: 680.2 bits (1754), Expect = 4.6e-192
Identity = 344/454 (75.77%), Postives = 374/454 (82.38%), Query Frame = 0


Query: 1   MTRNLSLIQILLLVFAWQCCAVIFDDVTGTKNLLKGIVPTANEQFLRPAEAPRRLGFSTL 60
           +TR++ L QILL VFAWQCC  +        NL   IV T N+Q   P  AP  LG  TL
Sbjct: 3   ITRDIGLFQILLWVFAWQCCDKVSAITNDIANLNYEIVSTINQQLPSPVAAPGPLGIETL 62

Query: 61  SNNGRTVN-DIKASVDLNENGGSVFDVTKHGAKADGKTDDAQAFMTTWIAACRNTVGPAK 120
            +    VN DI  + DLN NGGSVF VTKHGAKADGKTDDAQAF+TTWI ACRNTVGPAK
Sbjct: 63  PDLDNMVNDDINTNNDLNGNGGSVFHVTKHGAKADGKTDDAQAFVTTWIEACRNTVGPAK 122

Query: 121 FLIPQRTFLVGPVTFAGPCKSFPITLENQGTVKATIDISAYSSPEWFSIEDITGFILTGS 180
            LIP+ T+LVGPVT AGPCKSFPITLENQGTVKAT DIS YSSPEWFSIEDITGFILTGS
Sbjct: 123 ILIPEGTYLVGPVTLAGPCKSFPITLENQGTVKATTDISQYSSPEWFSIEDITGFILTGS 182

Query: 181 GVFDGQGLSVWPYNDCKKNNLCQILPISIKFTRLNHTIVDGLTSINSMGFHTSVFYCYNF 240
           GVFDGQG++ WPYNDCK NN+CQ+LPISIKF+RLN TIVD LTS+NS GFH S+F CYNF
Sbjct: 183 GVFDGQGVAAWPYNDCKNNNICQLLPISIKFSRLNDTIVDRLTSLNSKGFHMSLFSCYNF 242

Query: 241 TATNMKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIGHSTENITVTNVTCGPG 300
           TATN+ IIAPH+SPNTDG+HLSTSKLV IANS+IGTGDDCVSIGHSTE ITVTNVTCGPG
Sbjct: 243 TATNINIIAPHDSPNTDGIHLSTSKLVNIANSIIGTGDDCVSIGHSTEKITVTNVTCGPG 302

Query: 301 HGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPISGLASRIIFEDIVMNNV 360
           HGLSVGSLGKY +EK VYDVLVKNCTIFNATNGARIKT+ASPISG AS IIFEDIVM NV
Sbjct: 303 HGLSVGSLGKYPEEKDVYDVLVKNCTIFNATNGARIKTFASPISGSASGIIFEDIVMYNV 362

Query: 361 KNPIIIDQTYGT---KKKKQRTVQEH----SGTSTTNVAVLLECSKLFPCEGVELRDINL 420
           K PIIIDQTY T   K+ K +    H     GTS TNVAVLL+CSKL PCEGVELRDI+L
Sbjct: 363 KYPIIIDQTYDTNENKESKWKVSDVHFKNIRGTSATNVAVLLDCSKLLPCEGVELRDIDL 422

Query: 421 SYGGINLRNTTIVSSCSNAKIATFGVQNPPPCVV 447
           +YGG +L+NTTIVSSCSNAKI TFGVQNPPPC V
Sbjct: 423 TYGGTDLKNTTIVSSCSNAKITTFGVQNPPPCDV 456

[Close]

BLAST of CsGy4G019530 vs. NCBI nr
Match: XP_022991773.1 (exopolygalacturonase-like [Cucurbita maxima])

HSP 1 Score: 669.5 bits (1726), Expect = 8.1e-189
Identity = 343/457 (75.05%), Postives = 373/457 (81.62%), Query Frame = 0


Query: 2   TRNLSLIQILLLVFAWQCC---AVIFDDVTGTKNLLKGIVPTANEQFLRPAEAPRRLGFS 61
           TRNLSL Q LLLV A QCC   A +FD VTGT NL+ GIV TAN+Q  RP  AP  LG  
Sbjct: 4   TRNLSLFQTLLLVLACQCCAEVAAVFDHVTGTANLIDGIVSTANQQH-RPPAAPLPLGIR 63

Query: 62  TLSNNGRTV--NDIKASVDLNENGGSVFDVTKHGAKADGKTDDAQAFMTTWIAACRNTVG 121
           T +N   +V  N  KA+V L  NG +VFDV K+GAKA+GK+DDAQAFMTTWIAACRNT G
Sbjct: 64  TPANRRGSVAINGTKAAVYLKGNGNAVFDVKKYGAKANGKSDDAQAFMTTWIAACRNTTG 123

Query: 122 PAKFLIPQRTFLVGPVTFAGPCKSFPITLENQGTVKATIDISAYSSPEWFSIEDITGFIL 181
           PAKFLIP+  FLVGPVTFAGPCKS PIT+E QGTVKAT DIS YSSP+W SIE ITG IL
Sbjct: 124 PAKFLIPKGIFLVGPVTFAGPCKSMPITIEIQGTVKATTDISEYSSPDWISIEGITGLIL 183

Query: 182 TGSGVFDGQGLSVWPYNDCKKNNLCQILPISIKFTRLNHTIVDGLTSINSMGFHTSVFYC 241
           TGSGVFDGQG S WPYNDCK NN CQILP SIKFTRLNH+IVDGLTSINS GFHTSVF C
Sbjct: 184 TGSGVFDGQGASAWPYNDCKINNNCQILPNSIKFTRLNHSIVDGLTSINSKGFHTSVFRC 243

Query: 242 YNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIGHSTENITVTNVTC 301
           YNFTATNM I+AP NSPNTDGMHLSTSKLVTI++S IGTGDDCVSIGHS E ITVTNVTC
Sbjct: 244 YNFTATNMNIMAPGNSPNTDGMHLSTSKLVTISSSTIGTGDDCVSIGHSCEKITVTNVTC 303

Query: 302 GPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPISGLASRIIFEDIVM 361
           GPGHG+S+GSLG+Y  EK V DVLV+NCTIFNATNGARIKTWA+ ISG A  I+F++IVM
Sbjct: 304 GPGHGISIGSLGRYKTEKSVLDVLVQNCTIFNATNGARIKTWANTISGSAVGIVFDNIVM 363

Query: 362 NNVKNPIIIDQTYGTKKKKQRT-------VQEHSGTSTTNVAVLLECSKLFPCEGVELRD 421
             VKNPIIIDQTYGTK+KK           +   GTSTTNVAVLLECS+LFPCEGVELRD
Sbjct: 364 RKVKNPIIIDQTYGTKEKKASKWKISDVHFKNIRGTSTTNVAVLLECSELFPCEGVELRD 423

Query: 422 INLSYGGINLRNTTIVSSCSNAKIATFGVQNPPPCVV 447
           INLSYGG +L+NTT VSSC NAKI TFGVQNPP CVV
Sbjct: 424 INLSYGGASLKNTTTVSSCLNAKIKTFGVQNPPACVV 459

[Close]

BLAST of CsGy4G019530 vs. NCBI nr
Match: XP_023549400.1 (exopolygalacturonase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 666.4 bits (1718), Expect = 6.8e-188
Identity = 345/459 (75.16%), Postives = 373/459 (81.26%), Query Frame = 0


Query: 2   TRNLSLIQILLLVFAWQCC---AVIFDDVTGTKNLLKGIVPTANEQFLRPAEAPRRLGFS 61
           T NLSL Q LLLV A QCC   A +FD VT   N + GIV TAN+Q  RP   P  LG  
Sbjct: 4   TTNLSLFQTLLLVLACQCCAEVAAVFDHVTVAANPIDGIVSTANQQH-RPPAPPLPLGIG 63

Query: 62  TLSNN-GR-TVNDIKASVDL--NENGGSVFDVTKHGAKADGKTDDAQAFMTTWIAACRNT 121
           TL+N+ GR  +N  KA+V L  N NG +VFDV K+GAKA+GKTDDAQAFMTTWIAACRNT
Sbjct: 64  TLANSRGRVAINGTKAAVYLKGNGNGNAVFDVKKYGAKANGKTDDAQAFMTTWIAACRNT 123

Query: 122 VGPAKFLIPQRTFLVGPVTFAGPCKSFPITLENQGTVKATIDISAYSSPEWFSIEDITGF 181
            GPAKFLIP+ TFLVGPV FAGPCKS+PIT+E QGTVKAT DIS YSSP+W SIE ITG 
Sbjct: 124 TGPAKFLIPKGTFLVGPVVFAGPCKSWPITIEIQGTVKATTDISEYSSPDWISIEGITGL 183

Query: 182 ILTGSGVFDGQGLSVWPYNDCKKNNLCQILPISIKFTRLNHTIVDGLTSINSMGFHTSVF 241
           ILTGSGVFDGQG S WPYNDCK NN CQILP SIKFTRLNH+IVDGLTSINS GFHTSVF
Sbjct: 184 ILTGSGVFDGQGASAWPYNDCKTNNNCQILPNSIKFTRLNHSIVDGLTSINSKGFHTSVF 243

Query: 242 YCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIGHSTENITVTNV 301
            CYNFTATNM IIAP NSPNTDGMHLSTSKLVTI++S IGTGDDCVSIGHS E ITVTN+
Sbjct: 244 RCYNFTATNMNIIAPGNSPNTDGMHLSTSKLVTISSSTIGTGDDCVSIGHSCEKITVTNI 303

Query: 302 TCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPISGLASRIIFEDI 361
           TCGPGHG+S+GSLG+Y  EK V DVLV+NCTIFNATNGARIKTWA  ISG A  IIF++I
Sbjct: 304 TCGPGHGISIGSLGRYKTEKSVSDVLVQNCTIFNATNGARIKTWADTISGSAVGIIFDNI 363

Query: 362 VMNNVKNPIIIDQTYGTKKKKQRT-------VQEHSGTSTTNVAVLLECSKLFPCEGVEL 421
           VM  VKNPIIIDQTYGTKKKK           +   GTSTTNVAVLLECS+LFPCEGVEL
Sbjct: 364 VMRKVKNPIIIDQTYGTKKKKASKWKISNVHFKNIRGTSTTNVAVLLECSELFPCEGVEL 423

Query: 422 RDINLSYGGINLRNTTIVSSCSNAKIATFGVQNPPPCVV 447
           RDINLSYGG + +NTTIVSSC NAKI TFGVQNPPPCVV
Sbjct: 424 RDINLSYGGASSKNTTIVSSCLNAKIKTFGVQNPPPCVV 461

[Close]

BLAST of CsGy4G019530 vs. TAIR10
Match: AT1G02790.1 (polygalacturonase 4)

HSP 1 Score: 313.9 bits (803), Expect = 1.6e-85
Identity = 165/380 (43.42%), Postives = 226/380 (59.47%), Query Frame = 0


Query: 77  NENGGSVFDVTKHGAKADGKTDDAQAFMTTWIAACRNTVGPAKFLIPQRTFLVGPVTFAG 136
           N    +V+D+TK GA  DG T+  +AF+ TWI  C + V PA  L+P+ TFL GPV FAG
Sbjct: 45  NSGNPTVYDITKFGAVGDGSTNTFKAFLNTWIQVCDSPV-PATLLVPKGTFLAGPVIFAG 104

Query: 137 PCKSFPITLENQGTVKATIDISAYSSPEWFSIEDITGFILTGSGVFDGQGLSVWPYNDCK 196
           PCKS  +T+   GT+ AT   S Y++PEWF  E +   +LTG+G F G+G +VW  + C 
Sbjct: 105 PCKS-KVTVNVIGTIIAT--TSGYATPEWFLFERVDNLVLTGTGTFHGKGEAVWKADGCG 164

Query: 197 KNNLCQILPISIKFTRLNHTIVDGLTSINSMGFHTSVFYCYNFTATNMKIIAPHNSPNTD 256
           K   C + P S+KF  + +  ++G++S+N+  FH  +    N    N+K+ AP  SPNTD
Sbjct: 165 KKVQCNLPPTSLKFRNMKNVEINGISSVNAKAFHMFLVKTENVNIQNIKLTAPAESPNTD 224

Query: 257 GMHLSTSKLVTIANSVIGTGDDCVSIGHSTENITVTNVTCGPGHGLSVGSLGKYSKEKGV 316
           G+HLS +  V+I +S I TGDDCVS+G  + N+TV  V CGPGHGLSVGSLGKY  E+ V
Sbjct: 225 GIHLSNADNVSILDSTIATGDDCVSVGRGSNNVTVERVICGPGHGLSVGSLGKYKNEEDV 284

Query: 317 YDVLVKNCTIFNATNGARIKTWASPISGLASRIIFEDIVMNNVKNPIIIDQTYGTKKKKQ 376
             + V NCT+    NG RIKTW       A  I FE+I+M +VKNPIIIDQ YG++    
Sbjct: 285 SGIHVNNCTMIETDNGLRIKTWGGSDPSKAVDIKFENIIMQSVKNPIIIDQNYGSRGGDS 344

Query: 377 RTV------QEHSGTSTTNVAVLLECSKLFPCEGVELRDINLSY----GGINLRNT--TI 436
           +        +   GT+ T   V + CSK  PC+GV + D+NL Y    GG    ++   +
Sbjct: 345 QVAISDILFKNIRGTTITKDVVQIMCSKSVPCQGVNVVDVNLDYVGKTGGEKKSSSGGLV 404

Query: 437 VSSCSNAKIATFGVQNPPPC 445
            + C NA +   G  + P C
Sbjct: 405 GALCDNANVIFGGKLSFPMC 420

[Close]

BLAST of CsGy4G019530 vs. TAIR10
Match: AT4G18180.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 301.2 bits (770), Expect = 1.0e-81
Identity = 166/387 (42.89%), Postives = 227/387 (58.66%), Query Frame = 0


Query: 82  SVF--DVTKHGAKADGKTDDAQAFMTTWIAACRNTVGPAKFLIPQRTFLVGPVTFAGPCK 141
           SVF  DV   GA+A+   D  +AF+  W  AC+++      +IP+  F VG + F+GPC 
Sbjct: 31  SVFLVDVRSFGARANDHRDHTKAFVAAWDKACKSSSSSVNLIIPRGEFSVGSLRFSGPCT 90

Query: 142 SFP-ITLENQGTVKATIDISAY-SSPEWFSIEDITGFILTGSGVFDGQGLSVWPYNDCKK 201
           +   +T+     VKA+ D+S Y S   W     I G  LTG G FDGQG   WP+N+C  
Sbjct: 91  NVSNLTVR----VKASTDLSKYRSGGGWIQFGWINGLTLTGGGTFDGQGALAWPFNNCTS 150

Query: 202 NNLCQILPISIKFTRLNHTIVDGLTSINSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDG 261
           ++ C++LP S+KF  +N T+V  ++S+NS  FH ++  C +F  T + I AP +SPNTDG
Sbjct: 151 DSNCKLLPTSLKFVGMNRTVVRRISSVNSKFFHIALVECRDFKGTRLNITAPSDSPNTDG 210

Query: 262 MHLSTSKLVTIANSVIGTGDDCVSIGHSTENITVTNVTCGPGHGLSVGSLGKYSKEKGVY 321
           +H+  S  V  + S I TGDDCVSIG     IT+T++ CGPGHG+SVGSLG+Y  EK V 
Sbjct: 211 IHIERSSNVYFSRSHIATGDDCVSIGQGNSQITITSIKCGPGHGISVGSLGRYPNEKDVN 270

Query: 322 DVLVKNCTIFNATNGARIKTWA-SPISGLASRIIFEDIVMNNVKNPIIIDQTY------- 381
            ++VK+C I   TNG RIKTWA SP    A+ + FE+I+MNNV NPIIIDQ+Y       
Sbjct: 271 GLVVKDCKISGTTNGIRIKTWANSPGLSAATNMTFENIIMNNVTNPIIIDQSYCPFSSCI 330

Query: 382 ----GTKKKKQRTVQEHSGTSTTNVAVLLECSKLFPCEGVELRDINL----SYGG----I 441
                  +  +   +   GTS++ VAV L CS+  PC+ V L +++L    S GG     
Sbjct: 331 SNVPSKVELSEIYFKNIRGTSSSLVAVQLHCSRGMPCKKVYLENVHLDLSSSDGGRKQSS 390

Query: 442 NLRNTTIVSSCSNAKIATFGVQNPPPC 445
           N  N  + SSC N +    G Q PPPC
Sbjct: 391 NRGNEAVSSSCRNVRANYIGTQIPPPC 413

[Close]

BLAST of CsGy4G019530 vs. TAIR10
Match: AT3G07850.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 285.8 bits (730), Expect = 4.6e-77
Identity = 159/368 (43.21%), Postives = 205/368 (55.71%), Query Frame = 0


Query: 91  AKADGKTDDAQAFMTTWIAACRNTVGPAKFLIPQRTFLVGPVTFAGPCKSFPITLENQGT 150
           AK D KTDD+ AF   W  AC      +   +P+  ++V  + F GPCK  P+TLE  G 
Sbjct: 77  AKGDSKTDDSAAFAAAWKEAC---AAGSTITVPKGEYMVESLEFKGPCKG-PVTLELNGN 136

Query: 151 VKATIDISAYSSPE--WFSIEDITGFILTGS-GVFDGQGLSVWPYNDCKKNNLCQILPIS 210
            KA   +   + P   W   E+I  F L G+  +FDGQG   W  NDC K   C  LPI+
Sbjct: 137 FKAPATVKT-TKPHAGWIDFENIADFTLNGNKAIFDGQGSLAWKANDCAKTGKCNSLPIN 196

Query: 211 IKFTRLNHTIVDGLTSINSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVT 270
           I+FT L ++ ++ +TS NS  FH ++  C N T +++ I AP  S NTDG+H+  S  V 
Sbjct: 197 IRFTGLTNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNGVN 256

Query: 271 IANSVIGTGDDCVSIGHSTENITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIF 330
           +  + I TGDDCVSIG  TEN+ V NV CGPGHG+S+GSLG+Y  E+ V  V V+ C I 
Sbjct: 257 LIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIK 316

Query: 331 NATNGARIKTWASPISGLASRIIFEDIVMNNVKNPIIIDQTY-----------GTKKKKQ 390
           N  NG RIKTW     G+AS I+FEDI M+NV  P++IDQ Y              K   
Sbjct: 317 NTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSQVKLSD 376

Query: 391 RTVQEHSGTSTTNVAVLLECSKLFPCEGVELRDINLSYGGINLRNTTIVSSCSNAKIATF 445
            T++   GTS T VAV L CSK  PC  + L DINL + G   +    VS+CSN K    
Sbjct: 377 VTIKGIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNG---KEGPAVSACSNIKPILS 436

[Close]

BLAST of CsGy4G019530 vs. TAIR10
Match: AT3G14040.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 282.7 bits (722), Expect = 3.9e-76
Identity = 157/363 (43.25%), Postives = 202/363 (55.65%), Query Frame = 0


Query: 96  KTDDAQAFMTTWIAACRNTVGPAKFLIPQRTFLVGPVTFAGPCKSFPITLENQGTVKATI 155
           KTDD+ AF   W  AC      +   +P+  +LV  + F GPCK  P+TLE  G  KA  
Sbjct: 83  KTDDSAAFAAAWKEAC---AAGSTITVPKGEYLVESLEFKGPCKG-PVTLELNGNFKAPA 142

Query: 156 DISAYSSPE--WFSIEDITGFILTGS-GVFDGQGLSVWPYNDCKKNNLCQILPISIKFTR 215
            +   + P   W   E++  F L G+  +FDGQG   W  NDC K   C  LPI+I+FT 
Sbjct: 143 TVKT-TKPHAGWIDFENLADFTLNGNKAIFDGQGSLAWKANDCAKTGKCNSLPINIRFTG 202

Query: 216 LNHTIVDGLTSINSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSV 275
           L ++ ++ +TS NS  FH ++  C N T T++ I AP  S NTDG+H+  S  V +  + 
Sbjct: 203 LTNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNTDGIHIGRSNGVNLIGAK 262

Query: 276 IGTGDDCVSIGHSTENITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNG 335
           I TGDDCVSIG  TEN+ V NV CGPGHG+S+GSLG+Y  E+ V  V V+ C I N  NG
Sbjct: 263 IKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNG 322

Query: 336 ARIKTWASPISGLASRIIFEDIVMNNVKNPIIIDQTY-----------GTKKKKQRTVQE 395
            RIKTW     G+AS I+FEDI M+NV  P++IDQ Y              K    T++ 
Sbjct: 323 VRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSKVKLSDVTIKN 382

Query: 396 HSGTSTTNVAVLLECSKLFPCEGVELRDINLSYGGINLRNTTIVSSCSNAKIATFGVQNP 445
             GTS T VAV L CSK  PC  + L DINL + G   +    VS+CSN K    G   P
Sbjct: 383 IKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNG---KEGPAVSACSNIKPILSGKLVP 437

[Close]

BLAST of CsGy4G019530 vs. TAIR10
Match: AT2G15450.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 281.2 bits (718), Expect = 1.1e-75
Identity = 157/378 (41.53%), Postives = 221/378 (58.47%), Query Frame = 0


Query: 83  VFDVTKHGAKADGKTDDAQAFMTTWIAACRNTVGPAKFLIPQRTFLVGPVTFAGPCKSFP 142
           VF+V +HGAK DGKTD+A AF + W  AC+   G +K  +P+ TF +G V F GPCK+ P
Sbjct: 30  VFNVQRHGAKPDGKTDNANAFTSIWSRACKRISGSSKIYVPKGTFYLGGVEFVGPCKN-P 89

Query: 143 ITLENQGTVKATIDISAYSSPEWFSIEDITGFILTGSGVFDGQGLSVWPYNDCKKNNLCQ 202
           I     GT+ A  + S      W +   I    ++GSG  DGQG   WP+NDC  N  C 
Sbjct: 90  IEFIIDGTLLAPANPSDIKQDTWINFRYINNLSISGSGTLDGQGKQSWPHNDCHTNPNCP 149

Query: 203 ILPISIKFTRLNHTIVDGLTSINSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLST 262
            L +++ F  +N++ +  +TS+NS   H + F  ++F  T + I AP +SPNTDG+ + +
Sbjct: 150 KLAMTMGFAFVNNSNIKDITSLNSKMGHFNFFSVHHFNITGVTITAPGDSPNTDGIKMGS 209

Query: 263 SKLVTIANSVIGTGDDCVSIGHSTENITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVK 322
              + I+++ IGTGDDC++I   T N+ ++NV CGPGHG+SVGSLGK   EK V D++V+
Sbjct: 210 CSNIQISDTNIGTGDDCIAILSGTTNLNISNVNCGPGHGISVGSLGKNKDEKDVKDLIVR 269

Query: 323 NCTIFNAT-NGARIKTWASPISG-LASRIIFEDIVMNNVKNPIIIDQTY------GTKKK 382
           +  IFN T +G RIK W S  S  L S  ++E+I M +V  PI IDQ Y        ++K
Sbjct: 270 D-VIFNGTSDGIRIKNWESSASKILVSNFVYENIQMIDVGKPINIDQKYCPHPPCEHERK 329

Query: 383 KQRTVQEHS-------GTSTTNVAVLLECSKLFPCEGVELRDINLSYGGINLRNTTIVSS 442
            +  VQ  +       GTS   VAV L+CSK+FPC+ VEL DIN+   G+   ++T  S 
Sbjct: 330 GESHVQIQNLKLKNIYGTSKNKVAVNLQCSKIFPCKNVELIDINIKQNGVKDGSST--SV 389

Query: 443 CSNAKIATFGVQNPPPCV 446
           C N      G   PP C+
Sbjct: 390 CENVDGFARGKMFPPHCL 403

[Close]

BLAST of CsGy4G019530 vs. Swiss-Prot
Match: sp|P49062|PGLR1_ARATH (Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana OX=3702 GN=PGA3 PE=2 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 2.8e-84
Identity = 165/380 (43.42%), Postives = 226/380 (59.47%), Query Frame = 0


Query: 77  NENGGSVFDVTKHGAKADGKTDDAQAFMTTWIAACRNTVGPAKFLIPQRTFLVGPVTFAG 136
           N    +V+D+TK GA  DG T+  +AF+ TWI  C + V PA  L+P+ TFL GPV FAG
Sbjct: 45  NSGNPTVYDITKFGAVGDGSTNTFKAFLNTWIQVCDSPV-PATLLVPKGTFLAGPVIFAG 104

Query: 137 PCKSFPITLENQGTVKATIDISAYSSPEWFSIEDITGFILTGSGVFDGQGLSVWPYNDCK 196
           PCKS  +T+   GT+ AT   S Y++PEWF  E +   +LTG+G F G+G +VW  + C 
Sbjct: 105 PCKS-KVTVNVIGTIIAT--TSGYATPEWFLFERVDNLVLTGTGTFHGKGEAVWKADGCG 164

Query: 197 KNNLCQILPISIKFTRLNHTIVDGLTSINSMGFHTSVFYCYNFTATNMKIIAPHNSPNTD 256
           K   C + P S+KF  + +  ++G++S+N+  FH  +    N    N+K+ AP  SPNTD
Sbjct: 165 KKVQCNLPPTSLKFRNMKNVEINGISSVNAKAFHMFLVKTENVNIQNIKLTAPAESPNTD 224

Query: 257 GMHLSTSKLVTIANSVIGTGDDCVSIGHSTENITVTNVTCGPGHGLSVGSLGKYSKEKGV 316
           G+HLS +  V+I +S I TGDDCVS+G  + N+TV  V CGPGHGLSVGSLGKY  E+ V
Sbjct: 225 GIHLSNADNVSILDSTIATGDDCVSVGRGSNNVTVERVICGPGHGLSVGSLGKYKNEEDV 284

Query: 317 YDVLVKNCTIFNATNGARIKTWASPISGLASRIIFEDIVMNNVKNPIIIDQTYGTKKKKQ 376
             + V NCT+    NG RIKTW       A  I FE+I+M +VKNPIIIDQ YG++    
Sbjct: 285 SGIHVNNCTMIETDNGLRIKTWGGSDPSKAVDIKFENIIMQSVKNPIIIDQNYGSRGGDS 344

Query: 377 RTV------QEHSGTSTTNVAVLLECSKLFPCEGVELRDINLSY----GGINLRNT--TI 436
           +        +   GT+ T   V + CSK  PC+GV + D+NL Y    GG    ++   +
Sbjct: 345 QVAISDILFKNIRGTTITKDVVQIMCSKSVPCQGVNVVDVNLDYVGKTGGEKKSSSGGLV 404

Query: 437 VSSCSNAKIATFGVQNPPPC 445
            + C NA +   G  + P C
Sbjct: 405 GALCDNANVIFGGKLSFPMC 420

[Close]

BLAST of CsGy4G019530 vs. Swiss-Prot
Match: sp|Q39786|PGLR_GOSHI (Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 8.5e-81
Identity = 160/370 (43.24%), Postives = 215/370 (58.11%), Query Frame = 0


Query: 86  VTKHGAKADGKTDDAQAFMTTWIAACRNTVGPAKFLIPQRTFLVGPVTFAGPCKSFPITL 145
           V K GAKADGKTD ++ F+  W  AC  +V P+  +IP+ T+L+  V   GPCK+ PI +
Sbjct: 32  VAKFGAKADGKTDLSKPFLDAWKEACA-SVTPSTVVIPKGTYLLSKVNLEGPCKA-PIEI 91

Query: 146 ENQGTVKATIDISAYSSPEWFSIEDITGFILTGSGVFDGQGLSVWPYNDCKKNNLCQILP 205
             QGT++A  D SA+  P W     +  F + G G+FDGQG   +  N C+       LP
Sbjct: 92  NVQGTIQAPADPSAFKDPNWVRFYSVENFKMFGGGIFDGQGSIAYEKNTCENREFRSKLP 151

Query: 206 ISIKFTRLNHTIVDGLTSINSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKL 265
           ++I+F  L + ++  +TS +S  FH +VF C N T   +KI AP  SPNTDG+H+  S+ 
Sbjct: 152 VNIRFDFLTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEG 211

Query: 266 VTIANSVIGTGDDCVSIGHSTENITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCT 325
           V I  S I TGDDC+SIG  T+N+ +  +TCGPGHG+S+GSLGK+  E+ V  + + NCT
Sbjct: 212 VNIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCT 271

Query: 326 IFNATNGARIKTWASPISGLASRIIFEDIVMNNVKNPIIIDQTY----GTKKKKQRTVQE 385
           I N +NGARIKTW     G  S I FEDI MNNV +PI+IDQ Y      KK ++  V+ 
Sbjct: 272 ITNTSNGARIKTWPGEHGGAVSEIHFEDITMNNVSSPILIDQQYCPWNKCKKNEESKVKL 331

Query: 386 HS-------GTSTTNVAVLLECSKLFPCEGVELRDINLSYGGINLRNTTIVSSCSNAKIA 445
            +       GTS    A+   CS   PC+ VEL DI++ + G         S C N K  
Sbjct: 332 SNISFKNIRGTSALPEAIKFICSGSSPCQNVELADIDIKHNGAE----PATSQCLNVKPI 391

[Close]

BLAST of CsGy4G019530 vs. Swiss-Prot
Match: sp|Q39766|PGLR_GOSBA (Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 1.1e-80
Identity = 159/370 (42.97%), Postives = 215/370 (58.11%), Query Frame = 0


Query: 86  VTKHGAKADGKTDDAQAFMTTWIAACRNTVGPAKFLIPQRTFLVGPVTFAGPCKSFPITL 145
           V K GAKADGKTD ++ F+  W  AC  +V P+  +IP+ T+L+  V   GPCK+ PI +
Sbjct: 32  VAKFGAKADGKTDLSKPFLDAWKEACA-SVTPSTVVIPKGTYLLSKVNLEGPCKA-PIEI 91

Query: 146 ENQGTVKATIDISAYSSPEWFSIEDITGFILTGSGVFDGQGLSVWPYNDCKKNNLCQILP 205
             QGT++A  D SA+  P W     +  F + G G+FDGQG   +  N C+       LP
Sbjct: 92  NVQGTIQAPADPSAFKDPNWVRFYSVENFKMFGGGIFDGQGSIAYEKNTCENREFRSKLP 151

Query: 206 ISIKFTRLNHTIVDGLTSINSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKL 265
           ++I+F  + + ++  +TS +S  FH +VF C N T   +KI AP  SPNTDG+H+  S+ 
Sbjct: 152 VNIRFDFVTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEG 211

Query: 266 VTIANSVIGTGDDCVSIGHSTENITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCT 325
           V I  S I TGDDC+SIG  T+N+ +  +TCGPGHG+S+GSLGK+  E+ V  + + NCT
Sbjct: 212 VNIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCT 271

Query: 326 IFNATNGARIKTWASPISGLASRIIFEDIVMNNVKNPIIIDQTY----GTKKKKQRTVQE 385
           I N +NGARIKTW     G  S I FEDI MNNV +PI+IDQ Y      KK ++  V+ 
Sbjct: 272 ITNTSNGARIKTWPGEHGGAVSEIHFEDITMNNVSSPILIDQQYCPWNKCKKNEESKVKL 331

Query: 386 HS-------GTSTTNVAVLLECSKLFPCEGVELRDINLSYGGINLRNTTIVSSCSNAKIA 445
            +       GTS    A+   CS   PC+ VEL DI++ + G         S C N K  
Sbjct: 332 SNISFKNIRGTSALPEAIKFICSGSSPCQNVELADIDIQHNGAE----PATSQCLNVKPI 391

[Close]

BLAST of CsGy4G019530 vs. Swiss-Prot
Match: sp|Q6H9K0|PGLR2_PLAAC (Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 9.4e-80
Identity = 158/375 (42.13%), Postives = 218/375 (58.13%), Query Frame = 0


Query: 78  ENGGSVFDVTKHGAKADGKTDDAQAFMTTWIAACRNTVGPAKFLIPQRTFLVGPVTFAGP 137
           ++ GSVF+V  +GAK  G  D +QA M  W AAC +  GP+  LIP+  + +G V   GP
Sbjct: 4   QSSGSVFNVNDYGAKGAG--DISQAVMKAWKAACASQ-GPSTVLIPKGNYNMGEVAMQGP 63

Query: 138 CKSFPITLENQGTVKATIDISAYSSPEWFSIEDITGFILTGSGVFDGQGLSVWPYNDCKK 197
           CK   I  +  G VKA  D S + S  W S   I G  ++G+G  DGQG + W  N+C K
Sbjct: 64  CKGSKIGFQIDGVVKAPADPSKFKSDGWVSFYRIDGLTVSGTGTLDGQGQTAWAKNNCDK 123

Query: 198 NNLCQILPISIKFTRLNHTIVDGLTSINSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDG 257
           N  C+   ++++F  L H +V  +TS+NS  FH +V  C + T  ++ + AP  S NTDG
Sbjct: 124 NPNCKHAAMNLRFDFLKHAMVRDITSLNSKMFHINVLECEDITFQHVTVTAPGTSINTDG 183

Query: 258 MHLSTSKLVTIANSVIGTGDDCVSIGHSTENITVTNVTCGPGHGLSVGSLGKYSKEKGVY 317
           +H+  SK VTI N+ I TGDDC+SIG  ++N+T+T V CGPGHG+S+GSLG+Y+ EK V 
Sbjct: 184 IHVGISKGVTITNTKIATGDDCISIGPGSQNVTITQVNCGPGHGISIGSLGRYNNEKEVR 243

Query: 318 DVLVKNCTIFNATNGARIKTWASPISGLASRIIFEDIVMNNVKNPIIIDQTYGTKKKKQR 377
            + VK CT     NG R+KTW +   G A+ + F+D+ MNNV+NP+I+DQ Y    +  R
Sbjct: 244 GITVKGCTFSGTMNGVRVKTWPNSPPGAATDLTFQDLTMNNVQNPVILDQEYCPYGQCSR 303

Query: 378 TVQEH-----------SGTSTTNVAVLLECSKLFPCEGVELRDINLSYGGINLRNTTIVS 437
                            GTST  VAV++ CS   PC  +++ +INLSY G     T   S
Sbjct: 304 QAPSRIKLSNINFNNIRGTSTGKVAVVIACSHGMPCSNMKIGEINLSYRGAGGPAT---S 363

Query: 438 SCSNAKIATFGVQNP 442
           +CSN K    G Q P
Sbjct: 364 TCSNVKPTFSGKQVP 372

[Close]

BLAST of CsGy4G019530 vs. Swiss-Prot
Match: sp|P35339|PGLR3_MAIZE (Exopolygalacturonase OS=Zea mays OX=4577 GN=PG2C PE=2 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 3.0e-78
Identity = 163/390 (41.79%), Postives = 219/390 (56.15%), Query Frame = 0


Query: 68  NDIKASVDLNENGGSVFDVTKHGAKADGKTDDAQAFMTTWIAACRNTVGPAKFLIPQRTF 127
           ND KAS       G  FD+TK GA  +GKTD  +A    W +AC  T G    LIP+  F
Sbjct: 30  NDAKAS-----GPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGT-GKQTILIPKGDF 89

Query: 128 LVGPVTFAGPCKSFPITLENQGTVKATIDISAYSS-PEWFSIEDITGFILTGSGVFDGQG 187
           LVGP+ F GPCK   +T++  G + AT D+S Y     W  I  +   ++TG G  DGQG
Sbjct: 90  LVGPLNFTGPCKG-DVTIQVNGNLLATTDLSQYKDHGNWIEILRVDNLVITGKGKLDGQG 149

Query: 188 LSVWPYNDCKKNNLCQILPISIKFTRLNHTIVDGLTSINSMGFHTSVFYCYNFTATNMKI 247
            +VW  N C K   C+ILP S+    +N+  V G+T +NS  FH +++ C +    ++ +
Sbjct: 150 PAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNV 209

Query: 248 IAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIGHSTENITVTNVTCGPGHGLSVGS 307
            AP +SPNTDG+H+  S  VTI N+VIG GDDC+SIG  T  + +T VTCGPGHG+S+GS
Sbjct: 210 TAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGS 269

Query: 308 LGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPISGL-ASRIIFEDIVMNNVKNPIII 367
           LG+Y  EK V D+ VK+CT+    NG RIK +    S L AS+I +E+I M +   PIII
Sbjct: 270 LGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASVLTASKIHYENIKMEDSGYPIII 329

Query: 368 DQTYGTKK-----------KKQRTVQEHSGTSTTNVAVLLECSKLFPCEGVELRDINLSY 427
           D  Y   K            K  T +  +GTS+T  AV L C+   PC GV + D+N+ Y
Sbjct: 330 DMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVNLLCTAKIPCTGVTMDDVNIKY 389

Query: 428 GGINLRNTTIVSSCSNAKIATFGVQNPPPC 445
            G N +   +   C NAK +  G      C
Sbjct: 390 SGTNNKTMAV---CKNAKGSAKGCLKELAC 409

[Close]

BLAST of CsGy4G019530 vs. TrEMBL
Match: tr|A0A0A0KMA6|A0A0A0KMA6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222970 PE=3 SV=1)

HSP 1 Score: 769.6 bits (1986), Expect = 3.8e-219
Identity = 381/420 (90.71%), Postives = 392/420 (93.33%), Query Frame = 0


Query: 34  LKGIVPTANEQFLRPAEAPRRLGFSTLSNNGRTVNDIKASVDLNENGGSVFDVTKHGAKA 93
           L GIVPT N+QFLRPAEAPR LGF+TL + G TVNDI A+VDLNENGGSVFDVTKHGAKA
Sbjct: 6   LYGIVPTTNKQFLRPAEAPRHLGFNTLPDIGGTVNDINANVDLNENGGSVFDVTKHGAKA 65

Query: 94  DGKTDDAQAFMTTWIAACRNTVGPAKFLIPQRTFLVGPVTFAGPCKSFPITLENQGTVKA 153
           DGKTDDAQAFMTTWIAACRNTVGPAKFLIPQ TFLVGPVTFAGPCKS+PITLENQGTVKA
Sbjct: 66  DGKTDDAQAFMTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSYPITLENQGTVKA 125

Query: 154 TIDISAYSSPEWFSIEDITGFILTGSGVFDGQGLSVWPYNDCKKNNLCQILPISIKFTRL 213
           T DISAYSSPEWFS+EDITGFILTGSGVFDGQGLSVWPYNDCKKNNLCQ+LPISIKFTRL
Sbjct: 126 TTDISAYSSPEWFSLEDITGFILTGSGVFDGQGLSVWPYNDCKKNNLCQLLPISIKFTRL 185

Query: 214 NHTIVDGLTSINSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSVI 273
           NHTIVDGLTSINSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANS+I
Sbjct: 186 NHTIVDGLTSINSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSII 245

Query: 274 GTGDDCVSIGHSTENITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGA 333
           GTGDDCVSIGHSTENITVTNVTCGPGHGL   SLGKYSKEKGVYDVLVKNCTIFNATNGA
Sbjct: 246 GTGDDCVSIGHSTENITVTNVTCGPGHGL---SLGKYSKEKGVYDVLVKNCTIFNATNGA 305

Query: 334 RIKTWASPISGLASRIIFEDIVMNNVKNPIIIDQTYGTKKKKQRT-------VQEHSGTS 393
           RIKTWASP+SGLASRIIFEDIVM NVKNPIIIDQTYGTKKKK+          +   GTS
Sbjct: 306 RIKTWASPVSGLASRIIFEDIVMYNVKNPIIIDQTYGTKKKKESNWKVSNVQFKNIRGTS 365

Query: 394 TTNVAVLLECSKLFPCEGVELRDINLSYGGINLRNTTIVSSCSNAKIATFGVQNPPPCVV 447
           TTNVAVLLECSKLFPCEGVELRDINLSYGG NLRNTTIVSSCSNAKIATFGVQ PPPCVV
Sbjct: 366 TTNVAVLLECSKLFPCEGVELRDINLSYGGTNLRNTTIVSSCSNAKIATFGVQKPPPCVV 422

[Close]

BLAST of CsGy4G019530 vs. TrEMBL
Match: tr|A0A1S3BRD3|A0A1S3BRD3_CUCME (exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103492867 PE=3 SV=1)

HSP 1 Score: 680.2 bits (1754), Expect = 3.0e-192
Identity = 344/454 (75.77%), Postives = 374/454 (82.38%), Query Frame = 0


Query: 1   MTRNLSLIQILLLVFAWQCCAVIFDDVTGTKNLLKGIVPTANEQFLRPAEAPRRLGFSTL 60
           +TR++ L QILL VFAWQCC  +        NL   IV T N+Q   P  AP  LG  TL
Sbjct: 3   ITRDIGLFQILLWVFAWQCCDKVSAITNDIANLNYEIVSTINQQLPSPVAAPGPLGIETL 62

Query: 61  SNNGRTVN-DIKASVDLNENGGSVFDVTKHGAKADGKTDDAQAFMTTWIAACRNTVGPAK 120
            +    VN DI  + DLN NGGSVF VTKHGAKADGKTDDAQAF+TTWI ACRNTVGPAK
Sbjct: 63  PDLDNMVNDDINTNNDLNGNGGSVFHVTKHGAKADGKTDDAQAFVTTWIEACRNTVGPAK 122

Query: 121 FLIPQRTFLVGPVTFAGPCKSFPITLENQGTVKATIDISAYSSPEWFSIEDITGFILTGS 180
            LIP+ T+LVGPVT AGPCKSFPITLENQGTVKAT DIS YSSPEWFSIEDITGFILTGS
Sbjct: 123 ILIPEGTYLVGPVTLAGPCKSFPITLENQGTVKATTDISQYSSPEWFSIEDITGFILTGS 182

Query: 181 GVFDGQGLSVWPYNDCKKNNLCQILPISIKFTRLNHTIVDGLTSINSMGFHTSVFYCYNF 240
           GVFDGQG++ WPYNDCK NN+CQ+LPISIKF+RLN TIVD LTS+NS GFH S+F CYNF
Sbjct: 183 GVFDGQGVAAWPYNDCKNNNICQLLPISIKFSRLNDTIVDRLTSLNSKGFHMSLFSCYNF 242

Query: 241 TATNMKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIGHSTENITVTNVTCGPG 300
           TATN+ IIAPH+SPNTDG+HLSTSKLV IANS+IGTGDDCVSIGHSTE ITVTNVTCGPG
Sbjct: 243 TATNINIIAPHDSPNTDGIHLSTSKLVNIANSIIGTGDDCVSIGHSTEKITVTNVTCGPG 302

Query: 301 HGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPISGLASRIIFEDIVMNNV 360
           HGLSVGSLGKY +EK VYDVLVKNCTIFNATNGARIKT+ASPISG AS IIFEDIVM NV
Sbjct: 303 HGLSVGSLGKYPEEKDVYDVLVKNCTIFNATNGARIKTFASPISGSASGIIFEDIVMYNV 362

Query: 361 KNPIIIDQTYGT---KKKKQRTVQEH----SGTSTTNVAVLLECSKLFPCEGVELRDINL 420
           K PIIIDQTY T   K+ K +    H     GTS TNVAVLL+CSKL PCEGVELRDI+L
Sbjct: 363 KYPIIIDQTYDTNENKESKWKVSDVHFKNIRGTSATNVAVLLDCSKLLPCEGVELRDIDL 422

Query: 421 SYGGINLRNTTIVSSCSNAKIATFGVQNPPPCVV 447
           +YGG +L+NTTIVSSCSNAKI TFGVQNPPPC V
Sbjct: 423 TYGGTDLKNTTIVSSCSNAKITTFGVQNPPPCDV 456

[Close]

BLAST of CsGy4G019530 vs. TrEMBL
Match: tr|A0A0A0K5G0|A0A0A0K5G0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G375750 PE=3 SV=1)

HSP 1 Score: 636.0 bits (1639), Expect = 6.6e-179
Identity = 328/457 (71.77%), Postives = 360/457 (78.77%), Query Frame = 0


Query: 1   MTRNLSLIQILLLVFAWQC----CAVIFDDVTGTKNLLKGIVPTANEQFL-RPAEAPRRL 60
           ++R LSL QILLLVFAWQC     A+I DD+    NL   I+ T N+Q +  P   P  L
Sbjct: 3   ISRILSLFQILLLVFAWQCYDKVAAIITDDIA---NLNNEIISTINQQLIPSPTATPGPL 62

Query: 61  GFSTLSNNGRT-VNDIKASVDLNENGGSVFDVTKHGAKADGKTDDAQAFMTTWIAACRNT 120
           G  TL +   T             NG SVFDVTKHGAKADGKTDDAQAF TTWIAACRNT
Sbjct: 63  GMETLPDLDDTXXXXXXXXXXXXXNGESVFDVTKHGAKADGKTDDAQAFETTWIAACRNT 122

Query: 121 VGPAKFLIPQRTFLVGPVTFAGPCKSFPITLENQGTVKATIDISAYSSPEWFSIEDITGF 180
           VGP K LIP+ T+LVGP+T AGPCKSFPIT+ENQG VKAT D+S YSSPEWFSIEDITGF
Sbjct: 123 VGPVKILIPKGTYLVGPMTLAGPCKSFPITIENQGIVKATTDLSEYSSPEWFSIEDITGF 182

Query: 181 ILTGSGVFDGQGLSVWPYNDCKKNNLCQILPISIKFTRLNHTIVDGLTSINSMGFHTSVF 240
           ILTGSGVFDGQG +VW YNDCK N  CQ+LPISIKF+ LNHTIVDG+TS+NS GFH S+F
Sbjct: 183 ILTGSGVFDGQGTAVWAYNDCKSNKDCQLLPISIKFSGLNHTIVDGITSLNSKGFHMSLF 242

Query: 241 YCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIGHSTENITVTNV 300
            CYNFT TN+ IIAP  SPNTDG+HLSTS+LV I NS+IGTGDDCVSIGHST  ITVTNV
Sbjct: 243 NCYNFTITNVNIIAPDESPNTDGIHLSTSELVNIMNSIIGTGDDCVSIGHSTVKITVTNV 302

Query: 301 TCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPISGLASRIIFEDI 360
           TCGPGHGLSVGSLGKYS+EK VYDVLVKNCTIFNATNGARIKT+ASPISGLAS IIFEDI
Sbjct: 303 TCGPGHGLSVGSLGKYSREKDVYDVLVKNCTIFNATNGARIKTFASPISGLASGIIFEDI 362

Query: 361 VMNNVKNPIIIDQTYGT---KKKKQRTVQEH----SGTSTTNVAVLLECSKLFPCEGVEL 420
           +M NVK PIIIDQTY T   K+ K +    H     GTS TNV VLLECSKL PCEGV L
Sbjct: 363 IMYNVKYPIIIDQTYSTDENKESKWKVSDVHFKNIRGTSATNVGVLLECSKLLPCEGVVL 422

Query: 421 RDINLSYGGINLRNTTIVSSCSNAKIATFGVQNPPPC 445
           +DINL+YGG + +NTTIVSSC NAKI TFGVQNPPPC
Sbjct: 423 KDINLTYGGTDSKNTTIVSSCLNAKITTFGVQNPPPC 456

[Close]

BLAST of CsGy4G019530 vs. TrEMBL
Match: tr|A0A0A0K5I2|A0A0A0K5I2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398220 PE=3 SV=1)

HSP 1 Score: 597.8 bits (1540), Expect = 2.0e-167
Identity = 304/364 (83.52%), Postives = 317/364 (87.09%), Query Frame = 0


Query: 1   MTRNLSLIQILLLVFAWQCC---AVIFDDVTGTKNLLKGIVPTANEQFLRPAEAPRRLGF 60
           MTRN SLIQILLLVFAW+CC   A IF D   T+ LL GIVP  NEQFLRPAEAP  LGF
Sbjct: 1   MTRNFSLIQILLLVFAWECCARAAAIFIDTINTQILLNGIVPKVNEQFLRPAEAPWHLGF 60

Query: 61  STLSN-NGRTVNDIKASVDLNENGGSVFDVTKHGAKADGKTDDAQAFMTTWIAACRNTVG 120
           STL N  G TVNDIK +VDLNENGG VFDVTKHGAKADG+TDDAQAFMTTWIAACRNTVG
Sbjct: 61  STLPNIGGGTVNDIKVNVDLNENGGLVFDVTKHGAKADGETDDAQAFMTTWIAACRNTVG 120

Query: 121 PAKFLIPQRTFLVGPVTFAGPCKSFPITLENQGTVKATIDISAYSSPEWFSIEDITGFIL 180
           PAKFLIPQ  FLVGPVTFAGPCKSFPITLENQGTVKAT DISAYSS EWFSIED+TGFIL
Sbjct: 121 PAKFLIPQDIFLVGPVTFAGPCKSFPITLENQGTVKATTDISAYSSSEWFSIEDVTGFIL 180

Query: 181 TGSGVFDGQGLSVWPYNDCKKNNLCQILPISIKFTRLNHTIVDGLTSINSMGFHTSVFYC 240
           TGSGVFDGQG+S                  SIKF+RLNHTI+DGLTSINSMGFHTSVFYC
Sbjct: 181 TGSGVFDGQGVS------------------SIKFSRLNHTIIDGLTSINSMGFHTSVFYC 240

Query: 241 YNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIGHSTENITVTNVTC 300
           YNFTATNMKI APHNSPNTDGMHLSTSKLVTI+NS+IGTGDDCVSIGHSTENI +TNVTC
Sbjct: 241 YNFTATNMKITAPHNSPNTDGMHLSTSKLVTISNSIIGTGDDCVSIGHSTENIIITNVTC 300

Query: 301 GPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPISGLASRIIFEDIVM 360
           GPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKT+ASPI GLASRI+FEDIVM
Sbjct: 301 GPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTFASPIPGLASRIVFEDIVM 346

[Close]

BLAST of CsGy4G019530 vs. TrEMBL
Match: tr|A0A2I4EF09|A0A2I4EF09_9ROSI (exopolygalacturonase-like OS=Juglans regia OX=51240 GN=LOC108989004 PE=3 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 5.5e-117
Identity = 213/376 (56.65%), Postives = 267/376 (71.01%), Query Frame = 0


Query: 76  LNENGGSVFDVTKHGAKADGKTDDAQAFMTTWIAACRNTVGPAKFLIPQRTFLVGPVTFA 135
           L+  G +VFDVT +GAKADG  D+ QAFM  W+AAC++  GPAK LIP+ TF+ GPV FA
Sbjct: 37  LSGAGSNVFDVTSYGAKADGHKDNVQAFMKAWVAACKSG-GPAKLLIPKGTFVTGPVVFA 96

Query: 136 GPCKSFPITLENQGTVKATIDISAYSSPEWFSIEDITGFILTGSGVFDGQGLSVWPYNDC 195
           GPCK   +T+E QGT++AT D+S YSSPEWFS E++ G +L G G FDGQG +VW YNDC
Sbjct: 97  GPCKG-SMTVEVQGTIQATSDVSEYSSPEWFSFENLNGLLLNGGGTFDGQGATVWKYNDC 156

Query: 196 KKNNLCQILPISIKFTRLNHTIVDGLTSINSMGFHTSVFYCYNFTATNMKIIAPHNSPNT 255
           K+N+ CQILP SIKF  +N+  + G+TS+NS  FHT V  C NFTA ++ IIAP NSPNT
Sbjct: 157 KQNSNCQILPASIKFYIVNNAEIRGITSLNSKAFHTHVVNCQNFTAHDLNIIAPFNSPNT 216

Query: 256 DGMHLSTSKLVTIANSVIGTGDDCVSIGHSTENITVTNVTCGPGHGLSVGSLGKYSKEKG 315
           DGMH+S S LVT++N+ IGTGDDC+SIG    ++T++NVTCGPGHG+SVGSLGKY+ EK 
Sbjct: 217 DGMHISRSSLVTVSNTKIGTGDDCISIGQGATHVTISNVTCGPGHGISVGSLGKYNNEKD 276

Query: 316 VYDVLVKNCTIFNATNGARIKTWASPISGLASRIIFEDIVMNNVKNPIIIDQTYGTKKKK 375
           V  + V +CT+ + TNG RIKTW       AS I FEDI M++VKNPI+IDQ YG+    
Sbjct: 277 VSGIRVTHCTLKSTTNGVRIKTWPGSPPSQASDISFEDITMDSVKNPIVIDQKYGSHTSA 336

Query: 376 QRTVQEHS-------GTSTTNVAVLLECSKLFPCEGVELRDINLSYGGINLRNTTIVSSC 435
              V+  +       GTST+ VAV L CS L PC GV+L DI+L Y  I+ +  +I SSC
Sbjct: 337 PSKVKISNVRFKNIRGTSTSPVAVSLGCSSLVPCTGVQLTDIDLQYKDIDGKGKSISSSC 396

Query: 436 SNAKIATFGVQNPPPC 445
            NAKI   G QNP  C
Sbjct: 397 LNAKITCGGKQNPAAC 410

The following BLAST results are available for this feature:

BLAST of CsGy4G019530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011656188.1	4.0e-236	90.29	PREDICTED: exopolygalacturonase-like [Cucumis sativus]	[more]
KGN50738.1	5.7e-219	90.71	hypothetical protein Csa_5G222970 [Cucumis sativus]	[more]
XP_008451635.1	4.6e-192	75.77	PREDICTED: exopolygalacturonase-like [Cucumis melo]	[more]
XP_022991773.1	8.1e-189	75.05	exopolygalacturonase-like [Cucurbita maxima]	[more]
XP_023549400.1	6.8e-188	75.16	exopolygalacturonase-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy4G019530 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G02790.1	1.6e-85	43.42	polygalacturonase 4	[more]
AT4G18180.1	1.0e-81	42.89	Pectin lyase-like superfamily protein	[more]
AT3G07850.1	4.6e-77	43.21	Pectin lyase-like superfamily protein	[more]
AT3G14040.1	3.9e-76	43.25	Pectin lyase-like superfamily protein	[more]
AT2G15450.1	1.1e-75	41.53	Pectin lyase-like superfamily protein	[more]

BLAST of CsGy4G019530 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P49062\|PGLR1_ARATH	2.8e-84	43.42	Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana OX=3702 GN=PGA3 PE=2 ...	[more]
sp\|Q39786\|PGLR_GOSHI	8.5e-81	43.24	Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1	[more]
sp\|Q39766\|PGLR_GOSBA	1.1e-80	42.97	Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1	[more]
sp\|Q6H9K0\|PGLR2_PLAAC	9.4e-80	42.13	Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 S...	[more]
sp\|P35339\|PGLR3_MAIZE	3.0e-78	41.79	Exopolygalacturonase OS=Zea mays OX=4577 GN=PG2C PE=2 SV=1	[more]

BLAST of CsGy4G019530 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KMA6\|A0A0A0KMA6_CUCSA	3.8e-219	90.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222970 PE=3 SV=1	[more]
tr\|A0A1S3BRD3\|A0A1S3BRD3_CUCME	3.0e-192	75.77	exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103492867 PE=3 SV=1	[more]
tr\|A0A0A0K5G0\|A0A0A0K5G0_CUCSA	6.6e-179	71.77	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G375750 PE=3 SV=1	[more]
tr\|A0A0A0K5I2\|A0A0A0K5I2_CUCSA	2.0e-167	83.52	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398220 PE=3 SV=1	[more]
tr\|A0A2I4EF09\|A0A2I4EF09_9ROSI	5.5e-117	56.65	exopolygalacturonase-like OS=Juglans regia OX=51240 GN=LOC108989004 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0004650	polygalacturonase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0005975	carbohydrate metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR011050	Pectin_lyase_fold/virulence
IPR000743	Glyco_hydro_28
IPR012334	Pectin_lyas_fold
IPR006626	PbH1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0071555	cell wall organization
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0004650	polygalacturonase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G019530.1	CsGy4G019530.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 263..284 e-value: 1100.0 score: 6.8 coord: 346..367 e-value: 4500.0 score: 2.6 coord: 236..262 e-value: 8500.0 score: 0.6 coord: 316..337 e-value: 10.0 score: 15.1 coord: 286..306 e-value: 4000.0 score: 2.9
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 72..442 e-value: 1.7E-101 score: 342.2
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 115..430 e-value: 1.4E-82 score: 277.3
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 293..306
None	No IPR available	PANTHER	PTHR31375:SF17	EXOPOLYGALACTURONASE CLONE GBGE184	coord: 65..444
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 65..444
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	SSF51126	Pectin lyase-like	coord: 82..445

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy4G019530	Cucurbita maxima (Rimu)	cgybcmaB535
CsGy4G019530	Cucurbita maxima (Rimu)	cgybcmaB564
CsGy4G019530	Cucurbita moschata (Rifu)	cgybcmoB508
CsGy4G019530	Cucurbita moschata (Rifu)	cgybcmoB539
CsGy4G019530	Cucurbita pepo (Zucchini)	cgybcpeB464
CsGy4G019530	Cucurbita pepo (Zucchini)	cgybcpeB534
CsGy4G019530	Cucumber (Chinese Long) v2	cgybcuB166
CsGy4G019530	Bottle gourd (USVL1VR-Ls)	cgyblsiB243
CsGy4G019530	Melon (DHL92) v3.5.1	cgybmeB285
CsGy4G019530	Melon (DHL92) v3.6.1	cgybmedB285
CsGy4G019530	Watermelon (Charleston Gray)	cgybwcgB283
CsGy4G019530	Watermelon (97103) v1	cgybwmB308
CsGy4G019530	Wild cucumber (PI 183967)	cgybcpiB169
CsGy4G019530	Silver-seed gourd	carcgybB0297
CsGy4G019530	Silver-seed gourd	carcgybB0848
CsGy4G019530	Cucumber (Chinese Long) v3	cgybcucB171
CsGy4G019530	Watermelon (97103) v2	cgybwmbB283
CsGy4G019530	Wax gourd	cgybwgoB382
CsGy4G019530	Wax gourd	cgybwgoB390