CsGy4G018840 (gene) Cucumber (Gy14) v2

Overview
NameCsGy4G018840
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionE3 ubiquitin-protein ligase ORTHRUS 2-like
LocationChr4 : 24732107 .. 24732743 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAAACATGGTTTCTCAGCTGCCTTGCGACGGCGATGGCATTTGCATGCTTTGTCACTCTAAACCTTCCGACTTAGAAACCATCACTTGCAAAACCTGCGTCACTCCTTGGCATGTCCCTTGCCTCTCAAACCCCCCTGAAACCCTAGAATCTACTCTTCAGTGGGACTGTCCCGATTGTTCACTCCCTTCTCAGGATGCACTCCTTCCTCCCCCTTCCAATTCTCCACTCCCCATTCACCCTTCTAATGATCTCATTGCTGCGATTCGTGCCATTGAAGCTGATTCTTCCCTTGCTGACTCCGACAAGGCAAAGAAACGCCAGCAGCTGCTTACTGGAAACTCACTCTCCCATGAGATCAATGATGTTAACACTAAACAAGGGGACGATGTTTTGGATTTGTTTGATGAGAGGTTGAACTGTTCTTTCTGCATTCAGTTACCGGATAGGCCAGTCACTGTAAGTTCCTTCTCACATTTTTTCTTTTGCTTCCAATCATTTTATACTTTATTTAATGCAGTTTCCCTTTCATATGTATTCAATGTCAAATGCTGGCCCCATTGTATCTTGATCTTATTGGATTAAGGTTAGTAATGAGGGTTTTCTATTCTTCAATTGCCATTACAGTGAATGA

mRNA sequence

ATGCCAAACATGGTTTCTCAGCTGCCTTGCGACGGCGATGGCATTTGCATGCTTTGTCACTCTAAACCTTCCGACTTAGAAACCATCACTTGCAAAACCTGCGTCACTCCTTGGCATGTCCCTTGCCTCTCAAACCCCCCTGAAACCCTAGAATCTACTCTTCAGTGGGACTGTCCCGATTGTTCACTCCCTTCTCAGGATGCACTCCTTCCTCCCCCTTCCAATTCTCCACTCCCCATTCACCCTTCTAATGATCTCATTGCTGCGATTCGTGCCATTGAAGCTGATTCTTCCCTTGCTGACTCCGACAAGGCAAAGAAACGCCAGCAGCTGCTTACTGGAAACTCACTCTCCCATGAGATCAATGATGTTAACACTAAACAAGGGGACGATGTTTTGGATTTGTTTGATGAGAGGTTGAACTGTTCTTTCTGCATTCAGTTACCGGATAGGCCAGTCACTGTTAGTAATGAGGGTTTTCTATTCTTCAATTGCCATTACAGTGAATGA

Coding sequence (CDS)

ATGCCAAACATGGTTTCTCAGCTGCCTTGCGACGGCGATGGCATTTGCATGCTTTGTCACTCTAAACCTTCCGACTTAGAAACCATCACTTGCAAAACCTGCGTCACTCCTTGGCATGTCCCTTGCCTCTCAAACCCCCCTGAAACCCTAGAATCTACTCTTCAGTGGGACTGTCCCGATTGTTCACTCCCTTCTCAGGATGCACTCCTTCCTCCCCCTTCCAATTCTCCACTCCCCATTCACCCTTCTAATGATCTCATTGCTGCGATTCGTGCCATTGAAGCTGATTCTTCCCTTGCTGACTCCGACAAGGCAAAGAAACGCCAGCAGCTGCTTACTGGAAACTCACTCTCCCATGAGATCAATGATGTTAACACTAAACAAGGGGACGATGTTTTGGATTTGTTTGATGAGAGGTTGAACTGTTCTTTCTGCATTCAGTTACCGGATAGGCCAGTCACTGTTAGTAATGAGGGTTTTCTATTCTTCAATTGCCATTACAGTGAATGA

Protein sequence

MPNMVSQLPCDGDGICMLCHSKPSDLETITCKTCVTPWHVPCLSNPPETLESTLQWDCPDCSLPSQDALLPPPSNSPLPIHPSNDLIAAIRAIEADSSLADSDKAKKRQQLLTGNSLSHEINDVNTKQGDDVLDLFDERLNCSFCIQLPDRPVTVSNEGFLFFNCHYSE
Homology
[Close]
BLAST of CsGy4G018840 vs. NCBI nr
Match: XP_011653902.1 (PREDICTED: E3 ubiquitin-protein ligase ORTHRUS 2-like [Cucumis sativus] >KGN54816.1 hypothetical protein Csa_4G507950 [Cucumis sativus])

HSP 1 Score: 324.7 bits (831), Expect = 1.9e-85
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0 

Query: 1   MPNMVSQLPCDGDGICMLCHSKPSDLETITCKTCVTPWHVPCLSNPPETLESTLQWDCPD 60
           MPNMVSQLPCDGDGICMLCHSKPSDLETITCKTCVTPWHVPCLSNPPETLESTLQWDCPD
Sbjct: 1   MPNMVSQLPCDGDGICMLCHSKPSDLETITCKTCVTPWHVPCLSNPPETLESTLQWDCPD 60

Query: 61  CSLPSQDALLPPPSNSPLPIHPSNDLIAAIRAIEADSSLADSDKAKKRQQLLTGNSLSHE 120
           CSLPSQDALLPPPSNSPLPIHPSNDLIAAIRAIEADSSLADSDKAKKRQQLLTGNSLSHE
Sbjct: 61  CSLPSQDALLPPPSNSPLPIHPSNDLIAAIRAIEADSSLADSDKAKKRQQLLTGNSLSHE 120

Query: 121 INDVNTKQGDDVLDLFDERLNCSFCIQLPDRPVT 155
           INDVNTKQGDDVLDLFDERLNCSFCIQLPDRPVT
Sbjct: 121 INDVNTKQGDDVLDLFDERLNCSFCIQLPDRPVT 154

[Close]
BLAST of CsGy4G018840 vs. NCBI nr
Match: XP_008442097.1 (PREDICTED: E3 ubiquitin-protein ligase ORTHRUS 2-like [Cucumis melo])

HSP 1 Score: 306.6 bits (784), Expect = 5.2e-80
Identity = 145/154 (94.16%), Postives = 148/154 (96.10%), Query Frame = 0 

Query: 1   MPNMVSQLPCDGDGICMLCHSKPSDLETITCKTCVTPWHVPCLSNPPETLESTLQWDCPD 60
           MPNMVSQLPCDGDGICMLC +KPSDLETITCKTCVTPWHVPCLSNPPETLESTLQWDCPD
Sbjct: 1   MPNMVSQLPCDGDGICMLCQAKPSDLETITCKTCVTPWHVPCLSNPPETLESTLQWDCPD 60

Query: 61  CSLPSQDALLPPPSNSPLPIHPSNDLIAAIRAIEADSSLADSDKAKKRQQLLTGNSLSHE 120
           CSLPSQDA LPPPS+SPLPIHPSNDLIAAIRAIEADSSL DS KAKKRQ LLTGNSLSHE
Sbjct: 61  CSLPSQDAFLPPPSSSPLPIHPSNDLIAAIRAIEADSSLPDSQKAKKRQDLLTGNSLSHE 120

Query: 121 INDVNTKQGDDVLDLFDERLNCSFCIQLPDRPVT 155
           INDV+ KQGDDVLDLFDERLNCSFCIQLPDRPVT
Sbjct: 121 INDVDKKQGDDVLDLFDERLNCSFCIQLPDRPVT 154

[Close]
BLAST of CsGy4G018840 vs. NCBI nr
Match: XP_022933744.1 (E3 ubiquitin-protein ligase ORTHRUS 2-like [Cucurbita moschata])

HSP 1 Score: 243.0 bits (619), Expect = 7.1e-61
Identity = 114/151 (75.50%), Postives = 130/151 (86.09%), Query Frame = 0 

Query: 5   VSQLPCDGDGICMLCHSKPSDLETITCKTCVTPWHVPCLSNPPETLESTLQWDCPDCSLP 64
           VSQLPCDGDGICM C +KPSDLETITCKTCV PWHV CLSNPP+ L STLQWDCPDCS P
Sbjct: 4   VSQLPCDGDGICMRCQAKPSDLETITCKTCVAPWHVGCLSNPPQILASTLQWDCPDCSPP 63

Query: 65  SQDALLPPPSNSPLPIHPSNDLIAAIRAIEADSSLADSDKAKKRQQLLTGNSLSH-EIND 124
            +DA LPPP++ PLP+ PSNDL+AAIRAIEAD+SL D +KAKKRQ+LL+G S S  + +D
Sbjct: 64  PEDASLPPPASCPLPVTPSNDLVAAIRAIEADASLTDREKAKKRQELLSGKSQSEKDDHD 123

Query: 125 VNTKQGDDVLDLFDERLNCSFCIQLPDRPVT 155
            N K+GDDVLDLFDERL CSFC+QLP+RPVT
Sbjct: 124 ANEKRGDDVLDLFDERLKCSFCMQLPERPVT 154

[Close]
BLAST of CsGy4G018840 vs. NCBI nr
Match: XP_023531327.1 (E3 ubiquitin-protein ligase ORTHRUS 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 243.0 bits (619), Expect = 7.1e-61
Identity = 114/151 (75.50%), Postives = 130/151 (86.09%), Query Frame = 0 

Query: 5   VSQLPCDGDGICMLCHSKPSDLETITCKTCVTPWHVPCLSNPPETLESTLQWDCPDCSLP 64
           VSQLPCDGDGICM C +KPSDLETITCKTCV PWHV CLSNPP+ L STLQWDCPDCS P
Sbjct: 4   VSQLPCDGDGICMRCQAKPSDLETITCKTCVAPWHVGCLSNPPQILASTLQWDCPDCSPP 63

Query: 65  SQDALLPPPSNSPLPIHPSNDLIAAIRAIEADSSLADSDKAKKRQQLLTGNSLSH-EIND 124
            +DA LPPP++ PLP+ PSNDL+AAIRAIEAD+SL D +KAKKRQ+LL+G S S  + +D
Sbjct: 64  PEDASLPPPASCPLPVTPSNDLVAAIRAIEADASLTDREKAKKRQELLSGKSQSEKDDHD 123

Query: 125 VNTKQGDDVLDLFDERLNCSFCIQLPDRPVT 155
            N K+GDDVLDLFDERL CSFC+QLP+RPVT
Sbjct: 124 ANEKRGDDVLDLFDERLKCSFCMQLPERPVT 154

[Close]
BLAST of CsGy4G018840 vs. NCBI nr
Match: XP_022965844.1 (E3 ubiquitin-protein ligase ORTHRUS 2-like [Cucurbita maxima])

HSP 1 Score: 239.6 bits (610), Expect = 7.8e-60
Identity = 112/151 (74.17%), Postives = 128/151 (84.77%), Query Frame = 0 

Query: 5   VSQLPCDGDGICMLCHSKPSDLETITCKTCVTPWHVPCLSNPPETLESTLQWDCPDCSLP 64
           VSQLPCDGDGICM C +KPSDLETITCKTCV PWHV CLSNPP+ L STLQWDCPDCS P
Sbjct: 4   VSQLPCDGDGICMRCQAKPSDLETITCKTCVAPWHVGCLSNPPQILASTLQWDCPDCSPP 63

Query: 65  SQDALLPPPSNSPLPIHPSNDLIAAIRAIEADSSLADSDKAKKRQQLLTGNSLSH-EIND 124
            +DA LPPP++ PLP+ PSNDL+ AIRAIEAD+SL D +KA KRQ+LL+G S S  + +D
Sbjct: 64  PEDASLPPPASCPLPVTPSNDLVTAIRAIEADASLTDREKANKRQELLSGKSQSEKDDHD 123

Query: 125 VNTKQGDDVLDLFDERLNCSFCIQLPDRPVT 155
            N K+GDDVLDLFDERL CSFC+QLP+RPVT
Sbjct: 124 ANEKRGDDVLDLFDERLKCSFCMQLPERPVT 154

[Close]
BLAST of CsGy4G018840 vs. TAIR10
Match: AT1G57820.1 (Zinc finger (C3HC4-type RING finger) family protein)

HSP 1 Score: 137.5 bits (345), Expect = 7.6e-33
Identity = 75/155 (48.39%), Postives = 89/155 (57.42%), Query Frame = 0 

Query: 7   QLPCDGDGICMLCHSKPSDLETITCKTCVTPWHVPCLSNPPETLESTLQWDCPDCSLPSQ 66
           QLPCDGDG+CM C S P   E++TC TCVTPWHV CLS+PP+TL STLQW CPDCS   +
Sbjct: 6   QLPCDGDGVCMRCKSNPPPEESLTCGTCVTPWHVSCLSSPPKTLASTLQWHCPDCS--GE 65

Query: 67  DALLPPPSNSPLPIHPSNDLIAAIRAIEADSSLADSDKAKKRQQLLTGNSLSHEINDVNT 126
              LP    +       +DL+AAIRAIEAD SL+  +KAK R                  
Sbjct: 66  IDPLPVSGGATGFESAGSDLVAAIRAIEADESLSTEEKAKMRXXXXXXXXXXXXXXXXXX 125

Query: 127 KQGD-------DVLDLFDERLNCSFCIQLPDRPVT 155
                      DVL    + L CSFC+QLP+RPVT
Sbjct: 126 XXXXXXXXXXLDVLSALGDNLMCSFCMQLPERPVT 158

[Close]
BLAST of CsGy4G018840 vs. TAIR10
Match: AT5G39550.1 (Zinc finger (C3HC4-type RING finger) family protein)

HSP 1 Score: 111.7 bits (278), Expect = 4.5e-25
Identity = 64/152 (42.11%), Postives = 83/152 (54.61%), Query Frame = 0 

Query: 6   SQLPCDGDGICMLCHSKPSDLETITCKTCVTPWHVPCLSNPPETLESTLQWDCPDCS--- 65
           +QLPCDGDG+CM C   P   ET+TC TCVTPWHVPCL  P     ST +W+CPDCS   
Sbjct: 5   TQLPCDGDGVCMRCQVNPPSEETLTCGTCVTPWHVPCLL-PESLASSTGEWECPDCSGVV 64

Query: 66  LPSQDALLPPPSNSPLPIHPSNDLIAAIRAIEADSSLADSDKAKKRQQLLTGNSLSHEIN 125
           +PS      P + +  P    + L+AAIRAI+AD +L +++KA                 
Sbjct: 65  VPS----AAPGTGNARPESSGSVLVAAIRAIQADETLTEAEKA-----XXXXXXXXXXXX 124

Query: 126 DVNTKQGDDVLDLFDERLNCSFCIQLPDRPVT 155
                     L++F     CS CIQLP+RP+T
Sbjct: 125 XXXXXXXXXXLEIF-----CSICIQLPERPIT 141

[Close]
BLAST of CsGy4G018840 vs. TAIR10
Match: AT1G66040.1 (Zinc finger (C3HC4-type RING finger) family protein)

HSP 1 Score: 105.1 bits (261), Expect = 4.2e-23
Identity = 64/152 (42.11%), Postives = 80/152 (52.63%), Query Frame = 0 

Query: 6   SQLPCDGDGICMLCHSKPSDLETITCKTCVTPWHVPCLSNPPETLESTLQWDCPDCS--- 65
           +QLPCDGDG+CM C   P   ET+TC TCVTPWHV CL  P     ST  W+CPDCS   
Sbjct: 5   TQLPCDGDGVCMRCQVTPPSEETLTCGTCVTPWHVSCLL-PESLASSTGDWECPDCSGVV 64

Query: 66  LPSQDALLPPPSNSPLPIHPSNDLIAAIRAIEADSSLADSDKAKKRQQLLTGNSLSHEIN 125
           +PS      P +    P    + L+AAIRAI+AD +L +++KA                 
Sbjct: 65  VPS----AAPGTGISGPESSGSVLVAAIRAIQADVTLTEAEKA-----XXXXXXXXXXXX 124

Query: 126 DVNTKQGDDVLDLFDERLNCSFCIQLPDRPVT 155
                     L++F     CS CIQLP+RPVT
Sbjct: 125 XXXXXXXXXXLEIF-----CSICIQLPERPVT 141

[Close]
BLAST of CsGy4G018840 vs. TAIR10
Match: AT1G57800.1 (zinc finger (C3HC4-type RING finger) family protein)

HSP 1 Score: 104.4 bits (259), Expect = 7.1e-23
Identity = 63/164 (38.41%), Postives = 82/164 (50.00%), Query Frame = 0 

Query: 6   SQLPCDGDGICMLCHSKPSDLETITCKTCVTPWHVPCLSNPPETLESTLQWDCPDCSLPS 65
           +Q PCD +G+CM C S P   E++TC TCVTPWHV CL +PPETL +TLQW CPDCS   
Sbjct: 5   TQYPCDPEGVCMRCKSMPPPEESLTCGTCVTPWHVSCLLSPPETLSATLQWLCPDCS--- 64

Query: 66  QDALLPPPSNSPLPI--------HPSNDLIAAIRAIEADSSLA------DSDKAKKRQQL 125
                     +PLP+           +DL+AAI +IEAD +L+                 
Sbjct: 65  -------GETNPLPVSGVAAGYGSVGSDLVAAIHSIEADETLSAXXXXXXXXXXXXXXXX 124

Query: 126 LTGNSLSHEINDVNTKQGDDVLDLFDERLNCSFCIQLPDRPVTV 156
                          K+  DVL  F+    CSFC+Q   +PV+V
Sbjct: 125 XXXXXXXXXXXXXXGKKPIDVLSHFE----CSFCMQSLQKPVSV 154

[Close]
BLAST of CsGy4G018840 vs. TAIR10
Match: AT1G66050.1 (Zinc finger (C3HC4-type RING finger) family protein)

HSP 1 Score: 104.0 bits (258), Expect = 9.3e-23
Identity = 63/152 (41.45%), Postives = 79/152 (51.97%), Query Frame = 0 

Query: 6   SQLPCDGDGICMLCHSKPSDLETITCKTCVTPWHVPCLSNPPETLESTLQWDCPDCS--- 65
           +QLPCDGDG+CM C   P   ET+TC TCVTPWHV CL  P     ST  W+CPDCS   
Sbjct: 5   TQLPCDGDGVCMRCQVNPPSEETLTCGTCVTPWHVSCLL-PESLASSTGDWECPDCSGVV 64

Query: 66  LPSQDALLPPPSNSPLPIHPSNDLIAAIRAIEADSSLADSDKAKKRQQLLTGNSLSHEIN 125
           +PS      P +    P    + L+ AIRAI+AD +L +++KA                 
Sbjct: 65  VPS----AAPGTGISGPESSGSVLVTAIRAIQADVTLTEAEKA-----XXXXXXXXXXXX 124

Query: 126 DVNTKQGDDVLDLFDERLNCSFCIQLPDRPVT 155
                     L++F     CS CIQLP+RPVT
Sbjct: 125 XXXXXXXXXXLEIF-----CSICIQLPERPVT 141

[Close]
BLAST of CsGy4G018840 vs. Swiss-Prot
Match: sp|Q8VYZ0|ORTH2_ARATH (E3 ubiquitin-protein ligase ORTHRUS 2 OS=Arabidopsis thaliana OX=3702 GN=ORTH2 PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.4e-31
Identity = 75/155 (48.39%), Postives = 89/155 (57.42%), Query Frame = 0 

Query: 7   QLPCDGDGICMLCHSKPSDLETITCKTCVTPWHVPCLSNPPETLESTLQWDCPDCSLPSQ 66
           QLPCDGDG+CM C S P   E++TC TCVTPWHV CLS+PP+TL STLQW CPDCS   +
Sbjct: 6   QLPCDGDGVCMRCKSNPPPEESLTCGTCVTPWHVSCLSSPPKTLASTLQWHCPDCS--GE 65

Query: 67  DALLPPPSNSPLPIHPSNDLIAAIRAIEADSSLADSDKAKKRQQLLTGNSLSHEINDVNT 126
              LP    +       +DL+AAIRAIEAD SL+  +KAK R                  
Sbjct: 66  IDPLPVSGGATGFESAGSDLVAAIRAIEADESLSTEEKAKMRXXXXXXXXXXXXXXXXXX 125

Query: 127 KQGD-------DVLDLFDERLNCSFCIQLPDRPVT 155
                      DVL    + L CSFC+QLP+RPVT
Sbjct: 126 XXXXXXXXXXLDVLSALGDNLMCSFCMQLPERPVT 158

[Close]
BLAST of CsGy4G018840 vs. Swiss-Prot
Match: sp|Q9FKA7|ORTH1_ARATH (E3 ubiquitin-protein ligase ORTHRUS 1 OS=Arabidopsis thaliana OX=3702 GN=ORTH1 PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 8.1e-24
Identity = 64/152 (42.11%), Postives = 83/152 (54.61%), Query Frame = 0 

Query: 6   SQLPCDGDGICMLCHSKPSDLETITCKTCVTPWHVPCLSNPPETLESTLQWDCPDCS--- 65
           +QLPCDGDG+CM C   P   ET+TC TCVTPWHVPCL  P     ST +W+CPDCS   
Sbjct: 5   TQLPCDGDGVCMRCQVNPPSEETLTCGTCVTPWHVPCLL-PESLASSTGEWECPDCSGVV 64

Query: 66  LPSQDALLPPPSNSPLPIHPSNDLIAAIRAIEADSSLADSDKAKKRQQLLTGNSLSHEIN 125
           +PS      P + +  P    + L+AAIRAI+AD +L +++KA                 
Sbjct: 65  VPS----AAPGTGNARPESSGSVLVAAIRAIQADETLTEAEKA-----XXXXXXXXXXXX 124

Query: 126 DVNTKQGDDVLDLFDERLNCSFCIQLPDRPVT 155
                     L++F     CS CIQLP+RP+T
Sbjct: 125 XXXXXXXXXXLEIF-----CSICIQLPERPIT 141

[Close]
BLAST of CsGy4G018840 vs. Swiss-Prot
Match: sp|Q9C8E1|ORTH4_ARATH (Putative E3 ubiquitin-protein ligase ORTHRUS 4 OS=Arabidopsis thaliana OX=3702 GN=ORTH4 PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 7.5e-22
Identity = 64/152 (42.11%), Postives = 80/152 (52.63%), Query Frame = 0 

Query: 6   SQLPCDGDGICMLCHSKPSDLETITCKTCVTPWHVPCLSNPPETLESTLQWDCPDCS--- 65
           +QLPCDGDG+CM C   P   ET+TC TCVTPWHV CL  P     ST  W+CPDCS   
Sbjct: 5   TQLPCDGDGVCMRCQVTPPSEETLTCGTCVTPWHVSCLL-PESLASSTGDWECPDCSGVV 64

Query: 66  LPSQDALLPPPSNSPLPIHPSNDLIAAIRAIEADSSLADSDKAKKRQQLLTGNSLSHEIN 125
           +PS      P +    P    + L+AAIRAI+AD +L +++KA                 
Sbjct: 65  VPS----AAPGTGISGPESSGSVLVAAIRAIQADVTLTEAEKA-----XXXXXXXXXXXX 124

Query: 126 DVNTKQGDDVLDLFDERLNCSFCIQLPDRPVT 155
                     L++F     CS CIQLP+RPVT
Sbjct: 125 XXXXXXXXXXLEIF-----CSICIQLPERPVT 141

[Close]
BLAST of CsGy4G018840 vs. Swiss-Prot
Match: sp|Q9FVS2|ORTH3_ARATH (E3 ubiquitin-protein ligase ORTHRUS 3 OS=Arabidopsis thaliana OX=3702 GN=ORTH3 PE=3 SV=2)

HSP 1 Score: 104.4 bits (259), Expect = 1.3e-21
Identity = 63/164 (38.41%), Postives = 82/164 (50.00%), Query Frame = 0 

Query: 6   SQLPCDGDGICMLCHSKPSDLETITCKTCVTPWHVPCLSNPPETLESTLQWDCPDCSLPS 65
           +Q PCD +G+CM C S P   E++TC TCVTPWHV CL +PPETL +TLQW CPDCS   
Sbjct: 5   TQYPCDPEGVCMRCKSMPPPEESLTCGTCVTPWHVSCLLSPPETLSATLQWLCPDCS--- 64

Query: 66  QDALLPPPSNSPLPI--------HPSNDLIAAIRAIEADSSLA------DSDKAKKRQQL 125
                     +PLP+           +DL+AAI +IEAD +L+                 
Sbjct: 65  -------GETNPLPVSGVAAGYGSVGSDLVAAIHSIEADETLSAXXXXXXXXXXXXXXXX 124

Query: 126 LTGNSLSHEINDVNTKQGDDVLDLFDERLNCSFCIQLPDRPVTV 156
                          K+  DVL  F+    CSFC+Q   +PV+V
Sbjct: 125 XXXXXXXXXXXXXXGKKPIDVLSHFE----CSFCMQSLQKPVSV 154

[Close]
BLAST of CsGy4G018840 vs. Swiss-Prot
Match: sp|Q680I0|ORTH5_ARATH (E3 ubiquitin-protein ligase ORTHRUS 5 OS=Arabidopsis thaliana OX=3702 GN=ORTH5 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.7e-21
Identity = 63/152 (41.45%), Postives = 79/152 (51.97%), Query Frame = 0 

Query: 6   SQLPCDGDGICMLCHSKPSDLETITCKTCVTPWHVPCLSNPPETLESTLQWDCPDCS--- 65
           +QLPCDGDG+CM C   P   ET+TC TCVTPWHV CL  P     ST  W+CPDCS   
Sbjct: 5   TQLPCDGDGVCMRCQVNPPSEETLTCGTCVTPWHVSCLL-PESLASSTGDWECPDCSGVV 64

Query: 66  LPSQDALLPPPSNSPLPIHPSNDLIAAIRAIEADSSLADSDKAKKRQQLLTGNSLSHEIN 125
           +PS      P +    P    + L+ AIRAI+AD +L +++KA                 
Sbjct: 65  VPS----AAPGTGISGPESSGSVLVTAIRAIQADVTLTEAEKA-----XXXXXXXXXXXX 124

Query: 126 DVNTKQGDDVLDLFDERLNCSFCIQLPDRPVT 155
                     L++F     CS CIQLP+RPVT
Sbjct: 125 XXXXXXXXXXLEIF-----CSICIQLPERPVT 141

[Close]
BLAST of CsGy4G018840 vs. TrEMBL
Match: tr|A0A0A0L3V5|A0A0A0L3V5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G507950 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 1.2e-85
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0 

Query: 1   MPNMVSQLPCDGDGICMLCHSKPSDLETITCKTCVTPWHVPCLSNPPETLESTLQWDCPD 60
           MPNMVSQLPCDGDGICMLCHSKPSDLETITCKTCVTPWHVPCLSNPPETLESTLQWDCPD
Sbjct: 1   MPNMVSQLPCDGDGICMLCHSKPSDLETITCKTCVTPWHVPCLSNPPETLESTLQWDCPD 60

Query: 61  CSLPSQDALLPPPSNSPLPIHPSNDLIAAIRAIEADSSLADSDKAKKRQQLLTGNSLSHE 120
           CSLPSQDALLPPPSNSPLPIHPSNDLIAAIRAIEADSSLADSDKAKKRQQLLTGNSLSHE
Sbjct: 61  CSLPSQDALLPPPSNSPLPIHPSNDLIAAIRAIEADSSLADSDKAKKRQQLLTGNSLSHE 120

Query: 121 INDVNTKQGDDVLDLFDERLNCSFCIQLPDRPVT 155
           INDVNTKQGDDVLDLFDERLNCSFCIQLPDRPVT
Sbjct: 121 INDVNTKQGDDVLDLFDERLNCSFCIQLPDRPVT 154

[Close]
BLAST of CsGy4G018840 vs. TrEMBL
Match: tr|A0A1S3B4H1|A0A1S3B4H1_CUCME (E3 ubiquitin-protein ligase ORTHRUS 2-like OS=Cucumis melo OX=3656 GN=LOC103486058 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 3.5e-80
Identity = 145/154 (94.16%), Postives = 148/154 (96.10%), Query Frame = 0 

Query: 1   MPNMVSQLPCDGDGICMLCHSKPSDLETITCKTCVTPWHVPCLSNPPETLESTLQWDCPD 60
           MPNMVSQLPCDGDGICMLC +KPSDLETITCKTCVTPWHVPCLSNPPETLESTLQWDCPD
Sbjct: 1   MPNMVSQLPCDGDGICMLCQAKPSDLETITCKTCVTPWHVPCLSNPPETLESTLQWDCPD 60

Query: 61  CSLPSQDALLPPPSNSPLPIHPSNDLIAAIRAIEADSSLADSDKAKKRQQLLTGNSLSHE 120
           CSLPSQDA LPPPS+SPLPIHPSNDLIAAIRAIEADSSL DS KAKKRQ LLTGNSLSHE
Sbjct: 61  CSLPSQDAFLPPPSSSPLPIHPSNDLIAAIRAIEADSSLPDSQKAKKRQDLLTGNSLSHE 120

Query: 121 INDVNTKQGDDVLDLFDERLNCSFCIQLPDRPVT 155
           INDV+ KQGDDVLDLFDERLNCSFCIQLPDRPVT
Sbjct: 121 INDVDKKQGDDVLDLFDERLNCSFCIQLPDRPVT 154

[Close]
BLAST of CsGy4G018840 vs. TrEMBL
Match: tr|A0A0A0KMK1|A0A0A0KMK1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G273940 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.6e-56
Identity = 106/154 (68.83%), Postives = 123/154 (79.87%), Query Frame = 0 

Query: 5   VSQLPCDGDGICMLCHSKPSDLETITCKTCVTPWHVPCLSNPPETLESTLQWDCPDCSLP 64
           V+QLPCDGDGICMLC +KPSD+ETITCKTCVTPWHV CLS+PPETL STLQWDCPDCS P
Sbjct: 22  VTQLPCDGDGICMLCKAKPSDVETITCKTCVTPWHVSCLSSPPETLASTLQWDCPDCSTP 81

Query: 65  SQDALLPPPSNSPLPIHPSNDLIAAIRAIEADSSLADSDKAKKRQQLLTGNSLS----HE 124
            +D +LPPP N   P  PS+DL+ +IRAIEAD SL D +KA KRQ+LL+G   S    H+
Sbjct: 82  PEDVILPPPGNHSFPTAPSSDLVTSIRAIEADVSLTDREKANKRQELLSGKLQSDKDDHD 141

Query: 125 INDVNTKQGDDVLDLFDERLNCSFCIQLPDRPVT 155
            N    K+GD+V DL DERLNCSFC+QLP+RPVT
Sbjct: 142 TNKEKIKKGDNVFDLIDERLNCSFCMQLPERPVT 175

[Close]
BLAST of CsGy4G018840 vs. TrEMBL
Match: tr|A0A1S3CCG2|A0A1S3CCG2_CUCME (E3 ubiquitin-protein ligase ORTHRUS 2-like OS=Cucumis melo OX=3656 GN=LOC103499094 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 2.7e-56
Identity = 107/154 (69.48%), Postives = 123/154 (79.87%), Query Frame = 0 

Query: 5   VSQLPCDGDGICMLCHSKPSDLETITCKTCVTPWHVPCLSNPPETLESTLQWDCPDCSLP 64
           V+QLPCDGDGICMLC +KPSD+ETITCKTCVTPWHV CLSNPPETL STLQWDCPDCS P
Sbjct: 22  VTQLPCDGDGICMLCKAKPSDVETITCKTCVTPWHVSCLSNPPETLASTLQWDCPDCSTP 81

Query: 65  SQDALLPPPSNSPLPIHPSNDLIAAIRAIEADSSLADSDKAKKRQQLLTGNSLS----HE 124
            +D  LPP  N   P  PS+DL+ +IRAIEAD+SL D +KAKKRQ+LL+G   S    H+
Sbjct: 82  PEDVPLPPLGNHSFPTAPSSDLVTSIRAIEADASLTDREKAKKRQELLSGKLQSDKDGHD 141

Query: 125 INDVNTKQGDDVLDLFDERLNCSFCIQLPDRPVT 155
            N    K+GD+V DL DERLNCSFC+QLP+RPVT
Sbjct: 142 TNKEKKKKGDNVFDLLDERLNCSFCMQLPERPVT 175

[Close]
BLAST of CsGy4G018840 vs. TrEMBL
Match: tr|A0A200R3U3|A0A200R3U3_9MAGN (Zinc finger protein OS=Macleaya cordata OX=56857 GN=BVC80_1837g175 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 4.4e-43
Identity = 95/169 (56.21%), Postives = 110/169 (65.09%), Query Frame = 0 

Query: 6   SQLPCDGDGICMLCHSKPSDLETITCKTCVTPWHVPCLSNPPETLESTLQWDCPDCSLPS 65
           SQLPCDGDG+CMLC  KPS+ ET+TCKTC+TPWHV CLS+PPETL STLQW+CPDCS   
Sbjct: 5   SQLPCDGDGMCMLCKKKPSEEETLTCKTCITPWHVNCLSSPPETLSSTLQWECPDCS--- 64

Query: 66  QDALLPPPSNSPLPIHPSN----------DLIAAIRAIEADSSLADSDKAKKRQQLLTGN 125
                P   + PLP+ P N          +LIA IR IEAD SL D +KAKKRQ+LL+  
Sbjct: 65  -----PVTGDLPLPVIPQNIAAGDNGTSGNLIAVIRGIEADESLTDQEKAKKRQELLSRG 124

Query: 126 SLSHEINDVNTKQG----------DDVLDLFDERLNCSFCIQLPDRPVT 155
             S ++                  DDVLDLFD  LNCSFC+QLPDRPVT
Sbjct: 125 GKSADLEXXXXXXXXXXXXXXXXEDDVLDLFDGNLNCSFCMQLPDRPVT 165

The following BLAST results are available for this feature:
BLAST of CsGy4G018840 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011653902.11.9e-85100.00PREDICTED: E3 ubiquitin-protein ligase ORTHRUS 2-like [Cucumis sativus] >KGN5481... [more]
XP_008442097.15.2e-8094.16PREDICTED: E3 ubiquitin-protein ligase ORTHRUS 2-like [Cucumis melo][more]
XP_022933744.17.1e-6175.50E3 ubiquitin-protein ligase ORTHRUS 2-like [Cucurbita moschata][more]
XP_023531327.17.1e-6175.50E3 ubiquitin-protein ligase ORTHRUS 2-like [Cucurbita pepo subsp. pepo][more]
XP_022965844.17.8e-6074.17E3 ubiquitin-protein ligase ORTHRUS 2-like [Cucurbita maxima][more]
BLAST of CsGy4G018840 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G57820.17.6e-3348.39Zinc finger (C3HC4-type RING finger) family protein[more]
AT5G39550.14.5e-2542.11Zinc finger (C3HC4-type RING finger) family protein[more]
AT1G66040.14.2e-2342.11Zinc finger (C3HC4-type RING finger) family protein[more]
AT1G57800.17.1e-2338.41zinc finger (C3HC4-type RING finger) family protein[more]
AT1G66050.19.3e-2341.45Zinc finger (C3HC4-type RING finger) family protein[more]
BLAST of CsGy4G018840 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8VYZ0|ORTH2_ARATH1.4e-3148.39E3 ubiquitin-protein ligase ORTHRUS 2 OS=Arabidopsis thaliana OX=3702 GN=ORTH2 P... [more]
sp|Q9FKA7|ORTH1_ARATH8.1e-2442.11E3 ubiquitin-protein ligase ORTHRUS 1 OS=Arabidopsis thaliana OX=3702 GN=ORTH1 P... [more]
sp|Q9C8E1|ORTH4_ARATH7.5e-2242.11Putative E3 ubiquitin-protein ligase ORTHRUS 4 OS=Arabidopsis thaliana OX=3702 G... [more]
sp|Q9FVS2|ORTH3_ARATH1.3e-2138.41E3 ubiquitin-protein ligase ORTHRUS 3 OS=Arabidopsis thaliana OX=3702 GN=ORTH3 P... [more]
sp|Q680I0|ORTH5_ARATH1.7e-2141.45E3 ubiquitin-protein ligase ORTHRUS 5 OS=Arabidopsis thaliana OX=3702 GN=ORTH5 P... [more]
BLAST of CsGy4G018840 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L3V5|A0A0A0L3V5_CUCSA1.2e-85100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G507950 PE=4 SV=1[more]
tr|A0A1S3B4H1|A0A1S3B4H1_CUCME3.5e-8094.16E3 ubiquitin-protein ligase ORTHRUS 2-like OS=Cucumis melo OX=3656 GN=LOC1034860... [more]
tr|A0A0A0KMK1|A0A0A0KMK1_CUCSA1.6e-5668.83Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G273940 PE=4 SV=1[more]
tr|A0A1S3CCG2|A0A1S3CCG2_CUCME2.7e-5669.48E3 ubiquitin-protein ligase ORTHRUS 2-like OS=Cucumis melo OX=3656 GN=LOC1034990... [more]
tr|A0A200R3U3|A0A200R3U3_9MAGN4.4e-4356.21Zinc finger protein OS=Macleaya cordata OX=56857 GN=BVC80_1837g175 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011011Znf_FYVE_PHD
IPR019787Znf_PHD-finger
IPR019786Zinc_finger_PHD-type_CS
IPR013083Znf_RING/FYVE/PHD
IPR001965Znf_PHD
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
molecular_function GO:0016874 ligase activity
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy4G018840.1CsGy4G018840.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 15..62
e-value: 7.9E-5
score: 32.0
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 14..62
e-value: 3.9E-7
score: 31.9
NoneNo IPR availablePANTHERPTHR14140:SF27E3 UBIQUITIN-PROTEIN LIGASE ORTHRUS 1-RELATEDcoord: 27..151
NoneNo IPR availablePANTHERPTHR14140E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATEDcoord: 27..151
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 16..61
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 13..64
score: 8.52
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILYSSF57903FYVE/PHD zinc fingercoord: 7..65