CsGy4G018360 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy4G018360
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Putative methionine--trna ligase
Location	Chr4 : 23921432 .. 23930052 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAGAAAAAGAAAAAGAAAAAGCCAAGATAGGAACCTCTTGTAGAATTCTGACAATTTACCATCTTGGCTTCTTCCATTATCTCGATATGGCGTGGGGTTTAGGAGAGTAGTGTCCTCAAACACCCACAACTGGGAACGACGGAACCGGTTCCATTGACAAGCATGGCTTCTCTCCCAACTGCCGCTGTTATTGCCAATGTTGCAAAAACTGCCACCAATGCTCGCTTTTTCTTCTTCTTCTCTTCTTCTCTTTCCCATAACTTCGACCATTATCTCCCCTCCTTCGCTCCACCTCGAACCTTTTCTCGTTTCACTCCACCCCTTCGTACGGATAATGTCGCCGGAAGAATCTCCAGAAATGGTACACAGTTTCCGTTCTCATTTTGCACTACTGCGTCCACTGAGCCGGTCACCAGTGACGCCTCCATTGCATTGTCGTCCACATCATTGGATAAGGACGACGATGATCCGGAAAAGAATATTAAGGATGCGGCTGACATGCTCGATATTAGGGTTGGGCGAATCATTAAGGCTTGGAGACATCTGGAGGCTGACACTCTTTATGTTGAAGAAGTTGATGTTGGTGAACCCGAGCCGAGGCTTATTTGCAGTGGCCTTGTTAAATATATCCCTCTCGATCAACTTCTGGTACTTCATTTTTCCTTCTTATGATCAATACATTTAACTTCTGGTTCATTTATATAAGAAAAATATTTGACTGGACATGCTTAAAACTTGAACTCTACCCATTTTTTATTTTACTGTTTTTCTTTTCATGGCTTATAGATCGATTCCTTTACCAATTGGAGTCTTTTCCTTTTCCTCCTATCTTGTCCCTGGTGTTTTTGCTGTATAAAGTGGAAACCTCAGGAACCAACTCAGATTGCAGTTTTAGAGACTATTAAAGGTAGAGGAACAATGTAGGACTACTTGGTCTTGTGAATCTTTTATTAAAATGATATTGTGTTTCATACAAGAGTGGAAGACTTTCCTATTTATAGAAACAAGTCGGGTGAAAAGAAAATTAACCTAGAATGCTACCCAATTAACCTTCATTCTTCTTATAATCAAGAATTGAGAGAAAGTATATTTCTTATTCATCTAGAGTCAGAGTAAAGTTACACACATATATATATAACAAATAAACCCTAATTGTATGTACAATTATGATAAAGGACATATATTATAAATATATATCATAACACTCTCCATCAAGCTGAAGCAAATATGTCGATCATGCCCAATTTATTTTCGTTGAGACAAATAAATACCTTTCTTGCTTCTATCACTTAAATGCTCAAAAAATATTTCAATTGGTCGAAATCTTTCGTATTAAACTGATTCTGAAGGAAATTTTTGAGAGACGAAATACCCGATGCATCATTTCCAGTAATAACAATATATCAACATATACAACTTGTAAAATTATAACATTTTCAGATTGGCGATAGAAAGCAGAATGATCAGATTTACTCTTCTGCATACCAAAGCATACAAGAGCTTGACTAAACTTACCAAACCACGCACATGGACTCTATTTCAAACCATACAAAGATTTTCGAAGGCGACATACTTTCTCACTCTCCTCCTGAGCAACAAACCCAAATGGTTGTTCCATATAAACTTCCTCTTGAAGACCTCCATGTAGAAAAACATTCTTAATGTCAAGTTGATGCAAAGGTCATTTATGGCTAGCAACCATGAAAAGAAATAGGCAAATGGAAGTTAATTTGGCAATTGGAGAAAATGTATTTGAATAATCAGTTCCATAGATTGAGCATAACCTTTAGCAACAAAGCGAGCTTTCAATTGAGCCACTGTTCCATCATAATTCACCTTGACAACAAACACTCATTTACAACCAATGACCTTCTTTCCTGCAGGATGAGATACCAAATCCCAAGTACCATTATATGGAGTCAATAGACGTAATAAAAGCATATATGATGGGAGACGACCGGTGATAGGAAACAAAGGAAGAAACAGGGTAAGTACAGTTGCGTTTACCTTTTCGAAGAGCAATGGGAAGATCATCACTTGGCCTCGGATCACTTGATGAAGGAGGCATTGATGGAGGACATGAATCTAAAGGTTGTGGTGGAGGTTGTCGGTGTCGAAATAATGGTCAGTTGAAGATGACCTAAACTTAAGCCTAATGGAGAACGAAGCCACCAACTACGATATTCCAAATTCCAAACCCTAACGGCTTTGATACCATGTAATCAAGAATTTAGAGAAAAATATATTTCTTATTCATGTAGAGTCAGAATAAAGTTACATATATATGTATAGAGAGAGAACAAATAAACCCTAGACTGTATGTACAAGTACGATACAGGACATATATTTTAAGTATATATCATAACACTTCTTACATTAGATTTCCAAGATTAGGTCTCATAGATGAAGGAACTATCCTATAGGTGAATTGTTTAGTGTGTGAATGGAAGAAGCCTCAGGGTGGAACTAAAATTAAGATAAAGTTTTTTTTGTTTTTTGCTTTCTAGAATATTTATTCCAAGATCTTGGCTGTGGGGATGGCTGCGTGAGCACAATATCTTGTAGTTCAGCACAATCATTTCACACTAATAACTAATAAGTATGGTCTGGTTTAGGTGATTGGCAGCTTAGAAATATAAAAAATGGAACTTTCAAGTTTTGGGCCTCACATTACCAATGCTTATGTTTGTGTGCTATGCATGTCGTTACCTCTTTGACTGTTATTTTGTATTTGGGACTTAGTACTAGTTGGATCTAGTTAATGTTTAGGTTCTATTAGACCTCCAATCACAAAGGTATGTTCGAAGAAGGGTAAAATAGGAAACTCGGTCCCAAGTGTAGATAACTACCCAGCTTTGCATACTGTTAAATAAAGTTGTATAGTTATTTAAAAGCAGATAAGGATGGGTAATTATTTTAGGGAGTTGTAAATGCATTTCTCTGGATATTTAAGTTTGTACTATGGATAGCTCTTGTATCATGTGGGATGGGGATGTCTGTTTCCTTGTTCAAGTCAAGTGTAAATGTCGGGAGAGAAGGTTGACCTCACCTGTTGAATTGGTCACTAATTGATAGATTGTAATCATTAAACATATTATCTAACAGTAAATAAAGAGATACTTATGATATGACCTATCATATTCATATCAAAGTAACAACTTTGGTATGGGAGAAGAAAAGAACATTATCTTAGAAGGTTTGAAGTGGTAGAAAAAGAGATGAATGCAACAATTGGAGAATTAGAGTGCTTACTCGGGATGGAGTGTGCCATTGGCAAGTTGAAGGATGAAGTCACAAATTTTAGTGGCTTTTTGAGAGACCACTACTCCAAAGAACATTAGTCATTTAGTCGGCGTCTATGCTTCATAGACCTTTTGTAACCTATATTCTTTAACCGTTACTTTGCATAGCTGAAGTCCTTTTTGTAGAGGGGGTTCCTTCTTTATGGGCCTGGTTTTCTGTATGTCATTGTATTTTTTCACTTTTTCCTGATGAAAGATGTTTCCATCCAAGAAAAAAAACTTAGTTTAATATCTCGTGGAAATTTGTGATCAAGATCAAATGGATTATAGACTAAATGGGTCTTTCACCGATGATATTGTAAACTGTTTATCGTGTTTTTATTGTATGAACGGTTTAAACTTTTTACTCTACTGCAACATCCTTTACCTGTCTGATTCGAACATAACCAACATATAGGATAGAAGAGTTATTGTCCTCGCAAATTTGAAGCCAAGAAATATGCGAGGCATCAAATCTTGTGGAATGCTAATGGCTGCTTCTGATTCTTTGCACGAGAACGTTGAACTTCTTTTGCCTCCTGAGGGTTCGATTCCAGGTGAAAGAATATGGTTTGGATCTGAAGATGAAAAAGGCAACCAACCTGATGCTGCTGCCCCAAACCAGGTAAAGAAAATTCTTTTGAAAAATTTGAATCCTGCAAGACATGAATGTCATTTTATAATCTTACATATTTCAGTGCAAATTATAACATAAACTTGCGTTGACATCTACGCATCCATTACCTAAATTATTTTGATATCTGAATATCAAACTGTTACATGTGGATGATTTCCATCTCTATATGACAGTAGAACTTTTTTCCTTTTTTCTAAAAGAAAACAAAAAAGTTCATGTGGTTGATATCAAATGAGTTTTTTTTTGTTGCTGTGCTTTTACATCTTCACAGTATTCATGTCTGTCGTTTTACAGCCTTTTGGGGGGTGTTTGGATATCCGTAATGGGATTGGAATGCATTGTAATGTAATCTAAAATCCATGTTTGGATTGAGCGTTTTGAGTCCAAATTGTAATATTAAACTCATTTTGTTTATGTAGTTTTCAATTAAACTCTATTATCCATTGTTTTCACATTTTATGATTTCATTTTTGTTTCACCCTCAATTCGACACACATTCCAAACACTCTTTTGATTCCCAGTAATTCTTACTACATTCCAGCTCTCTAAACATCTCCTACAATCCTATTGTTCCAGAATTTCTACTTCTATGTACTCCACTAAACAATTTGTTTTGAACTACGAAAGAAGACTGTTATGCTACAGAAACGGACTGAACTTGACAAAAGGGTTGAATGCAGCCCCCACATTATCAACCAACTTACACAAATAATAAAAATGTAACTGGCAAATGAAAAGACAAATAATTACAACTGTATTCATTTTTCTATTTGAAAGTCAAGTTTTTCTATCCAAGAAGTAATAACTAAATACAATTGTCCCCAATTGTTCACATTAACAAAGGGTTTAGGGTTTCTTCGTGTCAATAAAGAAAAAAATGCTCTCTCCTCTCTCCACCAATCCCCGTTGTTTTAGCCTTCTAGCCTCCTCTATGCTACTCTTTGACGACTTAGCCAACTAGCCTCTCACTATTTCAAAGGTGCTTATTGTGGCCTCATGGAAGTCAAATGTTACTTTTTTTGGGAAAAGGAAACTATACCTTTTATTGATAAAATGAAAAGAAGAGAGTAACGTTGAAAGTACATAAATCCTTAGAAAAGAAAAGGAAGAGAACACCAAGAGAACATTTTTTTCTTTGAAAAGGAAACAAATTTCATATGTTAAATAATGAGTCAGAGCTCATAGTACAAGAGGGTTATACAATATGTAATTAAAGAACTAGGGATTAGTAGACGCACCCGGACATCTCAACTAGGTTGACACCCCTTTAACGTCCTCATCATATCCAAAAACAAAAATAAAGATAATGAAATGACATAAAGCTAAAAAAAAGTGGTCGAAAACATAAAACCTTTACATCAACATCCTTTCATGAACAAAAGACTAACTGACAAATCTAAAACGGGAAAAGCAGGGCCCTTTCCTAACTCTCCTTTGCTGGACTCAAAATGACTAAACAATAAAGGCTTGCCAGTTGAGATGAAGTCCTGTGTGGAAGAATCCTGGAATCCTTTGACCATGGAGCACCATGATGAAGCATTTAAACGGGCATACTCAAACCGATGGACCATACTAAAGCCATATTGTGGAAAACGCATTGAATCCTTTCAAACCAAATTTCTACTAATAAAGCCTTGACTGCATTGCACAATAGTATTAACTAGGTCTTCTTTAAATTTGGTCCGGAGATAATTTGTAATACCACTAAGCTGCCATAAAAAACCCATCTGAAATTAAAAATTTGCAGCAGCTTACTCCAACAGTTCGCTGCATAAGGACATTCAAAAAGTGCTGAAGATCTTGATTCATACAGCATAGATGAACCTTGTCTGTCTTTGCCTACAACAAAGCCTTCAAACAATCTCTTCGCATGCATCATTGAAATTAGGCTGCTTAAAACTTCATTTGTTAGGAGGAAGAGAAAAGGGGAAAGTGGGTCTCCTTCTCGAAGGCCTTGATACTTGAATTCTGCCTTGTGGTCTTCCATTTATAAAGATTGAATATTTGGGGTCGCGCACGCAACCCATTATCCATCTGCCATAAAAAATTTTCTGCACCATTACTTTTTCTAAAAAGTCCCAATCGACCCCATCAAAGGTTTTTTCAAGGTCCAACTTAAACAACCACCCCCTTCTTCTTTTTGCTTGGTATTCTTCCACTACTTTGTTGGCAATGAGAATGGGATCGTTGATCTGCCTTCCTTATAAGAAAGCACTTTGAGGAGGCTCAATAATGCTTGACATGATCTTCTTAAGTCTTTCAGCCAATACTTTCGCCACCAGCTTGCAAGTCAAAATAGTAAGACTTATTGGCTTGAAATCTTTCACCTTTGAAGCATCCTCTTTTTCTTGATTAAACAGATGAAGTTTTCCATTACACAAGCATTGAGCTTCCCATTGGCATAGAATTCTTTACAAAGGGAATGGAAATCGCTCTTCAATTCATCCCAAAATTTGATTAAGAATTCTGCTGTGAATCAATCCGGCCCCGGCACTTTACTCCTTCCCAACAATTTCAATGCTGATTTTATTTCTTCTACTAAAAATTATGAGGTCAAGCTTTTATTCTGATAATTGGAAACTACTGCCCAGATTAGGGGTAAAGGAAAGTGGCCAGCTTGTGGAGCTTTTGTGTATTAATCTGTAGAAGTCAAAAATTAACCCTTCAATCTCCACATATGAGGAAGTTGGAACCTGCGACACTCATTGACTAATTTGGAAATCAGATTTCTTCTTTTTTTGACAGCTAGAAACCGATGGAAGAACTTGGTGTTCTCATCCCCTAATTTCATCCAATTTAATTTACTTTTCTGAACAAGGTCTATTTCCTCCCTTCCATATATAGCTCCAGAAGGTCAACATTCAGCATCCATTTTAGGTTCTTCATCTGCTCATCCTTAACTTCTTCATTTGCTAAAGCTTTCAGCAAGCTTTCTTCGTTATATTTTCTGGCTTTTTCACTGTCACTGTTCCAATTTTCAGCTGAATTTTTAGGGGTCGAAGTTTGGATGCTATAACAAAGCCTGACCATCCTTGGTGACTTCCAGAAGCCAAGGAGTTCTCAATGAGCCTGCCACACTGTTTGTCGAATAACCATCTATTACATAAACGAAAAGGGGACGGCCCCCAACTAGAAGCCCCTGCCTCTAATAATATGGGGAAGTGATCCGAGCATGATTGAGCTTGCCGTGTAACTCTAGTATCTGCAAACAGATCTTCCCATTCGGAACTATTTACGAATCTGTCTAGCAAGGATCTGGAAATTATGTTGCCTTCTCGCAGAGTAATTCGTTATTTCCATTGTGGAAGACATGAATCCACATATATTTTCCTTGACTCTTGTCCTTGCTTCAGCCAATGGTTACTAGATTATTTCTTCTCAGATGATACATTAGTCAAGTGCGTTGAGATCTTTTCAGATATTAACCCTCTGGGGAAATGGTCAGTATATGCAATTTACATTCAAAAGTAGAGCATTGGTCTGATACTATTCACTCTCATCAAATGTTATTCTCAGTATGGAGGATGGATTAGTATTAAAAATTTGCCAATAAAGTGCTGGAAACATGCTGTCTTTGAAGCCAGTGGACAGAACCTGGGAGCCATTGGAGGTAGATTAGTATTTGGTCATCTAACACAATTGTTTGGATTGCTCTGCTGCTGTCATTCAAACAGAAAAGAACTTTGGCTTCCTTTCAGCTGAATTGTTATCAAGGATGCAAAGCCTGGGAATTTTTCCTACGTTATGTAGTGCGTTGTAGAGAATGGGCAAAAAATCAATTACACAGCATCTTGTAGTGGGGCGGCTGCATAATTTTTATCGTTTCTAACATCCACGTATTTAGCCACCATTGAGTTGAAAGTTCTTTTTTACTTGAATAAATCCAGGATGGTTAAATAATTTATGTTGGTAGCTGCTGTATAATAATATATATATATGTACATATCTGCGTTTTCTTGTGACAAATTAGAAATAAGATGTCTAATTAATGGTGTTGCATTTGAACAATGAATTGCACAGATTCAGAAGAAGAAAATATGGGAAATGGTCCAGCCTCATCTAAAGACAGATGGTTGTTGCACTGCTGTTTTGGGTTCCCATCCAATGAGGACTTCCGCTGGTGTTGTCACCTCCACTTCCCTTAAACATGCAAACATCTCTTGACTCTATCACCACCTCCCTCACGGCTTACATTGGCACTTGTTTTTTTCTCTAAATTTTTGTTCTATTTTGATATCTGGAACACAAACACGACAAGAATACATTTTCATATAAAAGAAGGAATGAATGTACAGTACCTTGCAATTTGTAATGCATATTTGTAGGGTTGCAGTGCTCATGAAGCTTCCTTAGTTAGGGCTATGTTTCAACAAACACTTTCCATTTAAATTCAGCATTTTTGGTAGTGATTTAAAAAGTGACAATGACCTAGAATCATCTAAAGTTGTTTGTGACAAAGCACTTGCTTTCTGCCCTTTTGCAGTGGAGTTTGATGGTAAAATCATACAATCTCTTCTAGAATCTAGCGACATCAAAATGGTTTTTCCTTGTTTCTTTTTTTCTCCCGAAGAGTAGGTGTTGCAAGCAGGTCTTGTTTGGATGGTATATTTATTATAGTAATGTTGTTGGGTAAAGAATGTATATTAAATCAATCACTTGAATAATGGGAGAAAATTGTCTCGTCTATCTTTTCTTTTGC

mRNA sequence

AAAAAAGAAAAAGAAAAAGAAAAAGCCAAGATAGGAACCTCTTGTAGAATTCTGACAATTTACCATCTTGGCTTCTTCCATTATCTCGATATGGCGTGGGGTTTAGGAGAGTAGTGTCCTCAAACACCCACAACTGGGAACGACGGAACCGGTTCCATTGACAAGCATGGCTTCTCTCCCAACTGCCGCTGTTATTGCCAATGTTGCAAAAACTGCCACCAATGCTCGCTTTTTCTTCTTCTTCTCTTCTTCTCTTTCCCATAACTTCGACCATTATCTCCCCTCCTTCGCTCCACCTCGAACCTTTTCTCGTTTCACTCCACCCCTTCGTACGGATAATGTCGCCGGAAGAATCTCCAGAAATGGTACACAGTTTCCGTTCTCATTTTGCACTACTGCGTCCACTGAGCCGGTCACCAGTGACGCCTCCATTGCATTGTCGTCCACATCATTGGATAAGGACGACGATGATCCGGAAAAGAATATTAAGGATGCGGCTGACATGCTCGATATTAGGGTTGGGCGAATCATTAAGGCTTGGAGACATCTGGAGGCTGACACTCTTTATGTTGAAGAAGTTGATGTTGGTGAACCCGAGCCGAGGCTTATTTGCAGTGGCCTTGTTAAATATATCCCTCTCGATCAACTTCTGGATAGAAGAGTTATTGTCCTCGCAAATTTGAAGCCAAGAAATATGCGAGGCATCAAATCTTGTGGAATGCTAATGGCTGCTTCTGATTCTTTGCACGAGAACGTTGAACTTCTTTTGCCTCCTGAGGGTTCGATTCCAGGTGAAAGAATATGGTTTGGATCTGAAGATGAAAAAGGCAACCAACCTGATGCTGCTGCCCCAAACCAGATTCAGAAGAAGAAAATATGGGAAATGGTCCAGCCTCATCTAAAGACAGATGGTTGTTGCACTGCTGTTTTGGGTTCCCATCCAATGAGGACTTCCGCTGGTGTTGTCACCTCCACTTCCCTTAAACATGCAAACATCTCTTGACTCTATCACCACCTCCCTCACGGCTTACATTGGCACTTGTTTTTTTCTCTAAATTTTTGTTCTATTTTGATATCTGGAACACAAACACGACAAGAATACATTTTCATATAAAAGAAGGAATGAATGTACAGTACCTTGCAATTTGTAATGCATATTTGTAGGGTTGCAGTGCTCATGAAGCTTCCTTAGTTAGGGCTATGTTTCAACAAACACTTTCCATTTAAATTCAGCATTTTTGGTAGTGATTTAAAAAGTGACAATGACCTAGAATCATCTAAAGTTGTTTGTGACAAAGCACTTGCTTTCTGCCCTTTTGCAGTGGAGTTTGATGGTAAAATCATACAATCTCTTCTAGAATCTAGCGACATCAAAATGGTTTTTCCTTGTTTCTTTTTTTCTCCCGAAGAGTAGGTGTTGCAAGCAGGTCTTGTTTGGATGGTATATTTATTATAGTAATGTTGTTGGGTAAAGAATGTATATTAAATCAATCACTTGAATAATGGGAGAAAATTGTCTCGTCTATCTTTTCTTTTGC

Coding sequence (CDS)

ATGGCTTCTCTCCCAACTGCCGCTGTTATTGCCAATGTTGCAAAAACTGCCACCAATGCTCGCTTTTTCTTCTTCTTCTCTTCTTCTCTTTCCCATAACTTCGACCATTATCTCCCCTCCTTCGCTCCACCTCGAACCTTTTCTCGTTTCACTCCACCCCTTCGTACGGATAATGTCGCCGGAAGAATCTCCAGAAATGGTACACAGTTTCCGTTCTCATTTTGCACTACTGCGTCCACTGAGCCGGTCACCAGTGACGCCTCCATTGCATTGTCGTCCACATCATTGGATAAGGACGACGATGATCCGGAAAAGAATATTAAGGATGCGGCTGACATGCTCGATATTAGGGTTGGGCGAATCATTAAGGCTTGGAGACATCTGGAGGCTGACACTCTTTATGTTGAAGAAGTTGATGTTGGTGAACCCGAGCCGAGGCTTATTTGCAGTGGCCTTGTTAAATATATCCCTCTCGATCAACTTCTGGATAGAAGAGTTATTGTCCTCGCAAATTTGAAGCCAAGAAATATGCGAGGCATCAAATCTTGTGGAATGCTAATGGCTGCTTCTGATTCTTTGCACGAGAACGTTGAACTTCTTTTGCCTCCTGAGGGTTCGATTCCAGGTGAAAGAATATGGTTTGGATCTGAAGATGAAAAAGGCAACCAACCTGATGCTGCTGCCCCAAACCAGATTCAGAAGAAGAAAATATGGGAAATGGTCCAGCCTCATCTAAAGACAGATGGTTGTTGCACTGCTGTTTTGGGTTCCCATCCAATGAGGACTTCCGCTGGTGTTGTCACCTCCACTTCCCTTAAACATGCAAACATCTCTTGA

Protein sequence

MASLPTAAVIANVAKTATNARFFFFFSSSLSHNFDHYLPSFAPPRTFSRFTPPLRTDNVAGRISRNGTQFPFSFCTTASTEPVTSDASIALSSTSLDKDDDDPEKNIKDAADMLDIRVGRIIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVIVLANLKPRNMRGIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAAAPNQIQKKKIWEMVQPHLKTDGCCTAVLGSHPMRTSAGVVTSTSLKHANIS

Homology

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BLAST of CsGy4G018360 vs. NCBI nr
Match: XP_004144343.1 (PREDICTED: aminoacyl tRNA synthase complex-interacting multifunctional protein 1 [Cucumis sativus] >KGN54737.1 hypothetical protein Csa_4G438550 [Cucumis sativus])

HSP 1 Score: 553.1 bits (1424), Expect = 5.3e-154
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0


Query: 1   MASLPTAAVIANVAKTATNARFFFFFSSSLSHNFDHYLPSFAPPRTFSRFTPPLRTDNVA 60
           MASLPTAAVIANVAKTATNARFFFFFSSSLSHNFDHYLPSFAPPRTFSRFTPPLRTDNVA
Sbjct: 1   MASLPTAAVIANVAKTATNARFFFFFSSSLSHNFDHYLPSFAPPRTFSRFTPPLRTDNVA 60

Query: 61  GRISRNGTQFPFSFCTTASTEPVTSDASIALSSTSLDKDDDDPEKNIKDAADMLDIRVGR 120
           GRISRNGTQFPFSFCTTASTEPVTSDASIALSSTSLDKDDDDPEKNIKDAADMLDIRVGR
Sbjct: 61  GRISRNGTQFPFSFCTTASTEPVTSDASIALSSTSLDKDDDDPEKNIKDAADMLDIRVGR 120

Query: 121 IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVIVLANLKPRNMRGI 180
           IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVIVLANLKPRNMRGI
Sbjct: 121 IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVIVLANLKPRNMRGI 180

Query: 181 KSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAAAPNQIQKKKIWEM 240
           KSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAAAPNQIQKKKIWEM
Sbjct: 181 KSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAAAPNQIQKKKIWEM 240

Query: 241 VQPHLKTDGCCTAVLGSHPMRTSAGVVTSTSLKHANIS 279
           VQPHLKTDGCCTAVLGSHPMRTSAGVVTSTSLKHANIS
Sbjct: 241 VQPHLKTDGCCTAVLGSHPMRTSAGVVTSTSLKHANIS 278

[Close]

BLAST of CsGy4G018360 vs. NCBI nr
Match: XP_008449535.1 (PREDICTED: aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X1 [Cucumis melo])

HSP 1 Score: 522.3 bits (1344), Expect = 1.0e-144
Identity = 262/278 (94.24%), Postives = 269/278 (96.76%), Query Frame = 0


Query: 1   MASLPTAAVIANVAKTATNARFFFFFSSSLSHNFDHYLPSFAPPRTFSRFTPPLRTDNVA 60
           MASLPTAA IANVAKTATNARFFFFFSSSLSHNFDH +P FA PRTFSRFTP LR DNVA
Sbjct: 1   MASLPTAAAIANVAKTATNARFFFFFSSSLSHNFDHCIPFFALPRTFSRFTPSLRKDNVA 60

Query: 61  GRISRNGTQFPFSFCTTASTEPVTSDASIALSSTSLDKDDDDPEKNIKDAADMLDIRVGR 120
           GRISRNGT+FPFSFCTTASTEPVTSDASIA SSTS+DK DDDPEKNIK+AADMLDIRVGR
Sbjct: 61  GRISRNGTRFPFSFCTTASTEPVTSDASIASSSTSMDKGDDDPEKNIKNAADMLDIRVGR 120

Query: 121 IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVIVLANLKPRNMRGI 180
           IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRV+VLANLKPRNMRGI
Sbjct: 121 IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVVVLANLKPRNMRGI 180

Query: 181 KSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAAAPNQIQKKKIWEM 240
           KSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAA+PNQIQKKKIWEM
Sbjct: 181 KSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAASPNQIQKKKIWEM 240

Query: 241 VQPHLKTDGCCTAVLGSHPMRTSAGVVTSTSLKHANIS 279
           VQPHLKTDGCCTAVLGSHP+RTS GVVTSTSLKHANIS
Sbjct: 241 VQPHLKTDGCCTAVLGSHPLRTSTGVVTSTSLKHANIS 278

[Close]

BLAST of CsGy4G018360 vs. NCBI nr
Match: XP_016900725.1 (PREDICTED: aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X2 [Cucumis melo])

HSP 1 Score: 431.4 bits (1108), Expect = 2.3e-117
Identity = 217/232 (93.53%), Postives = 224/232 (96.55%), Query Frame = 0


Query: 1   MASLPTAAVIANVAKTATNARFFFFFSSSLSHNFDHYLPSFAPPRTFSRFTPPLRTDNVA 60
           MASLPTAA IANVAKTATNARFFFFFSSSLSHNFDH +P FA PRTFSRFTP LR DNVA
Sbjct: 1   MASLPTAAAIANVAKTATNARFFFFFSSSLSHNFDHCIPFFALPRTFSRFTPSLRKDNVA 60

Query: 61  GRISRNGTQFPFSFCTTASTEPVTSDASIALSSTSLDKDDDDPEKNIKDAADMLDIRVGR 120
           GRISRNGT+FPFSFCTTASTEPVTSDASIA SSTS+DK DDDPEKNIK+AADMLDIRVGR
Sbjct: 61  GRISRNGTRFPFSFCTTASTEPVTSDASIASSSTSMDKGDDDPEKNIKNAADMLDIRVGR 120

Query: 121 IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVIVLANLKPRNMRGI 180
           IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRV+VLANLKPRNMRGI
Sbjct: 121 IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVVVLANLKPRNMRGI 180

Query: 181 KSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAAAPNQI 233
           KSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAA+PNQ+
Sbjct: 181 KSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAASPNQV 232

[Close]

BLAST of CsGy4G018360 vs. NCBI nr
Match: XP_022966410.1 (aminoacyl tRNA synthase complex-interacting multifunctional protein 1 [Cucurbita maxima] >XP_022966411.1 aminoacyl tRNA synthase complex-interacting multifunctional protein 1 [Cucurbita maxima])

HSP 1 Score: 407.1 bits (1045), Expect = 4.7e-110
Identity = 220/291 (75.60%), Postives = 228/291 (78.35%), Query Frame = 0


Query: 1   MASLPTAAVIANVAKTATNARFFFF---FSSSLSHNFDHYLPSFAPPRTFSRFTPPLRTD 60
           MASLPTAA IANV KTATN R  FF   FSSSL H FDH  P FA  RTF  FTPPL  D
Sbjct: 3   MASLPTAAAIANVTKTATNGRLLFFSSSFSSSLPHKFDHSRPFFALRRTFPCFTPPLHKD 62

Query: 61  NVA------GRISRNGTQFPFSFCTTASTEPVTSDASI----ALSSTSLDKDDDDPEKNI 120
            VA      GRISRNG +FPFSFCT +STEP TS A I                      
Sbjct: 63  KVASIQETRGRISRNGARFPFSFCTASSTEPATSGAPIXXXXXXXXXXXXXXXXXXXXXX 122

Query: 121 KDAADMLDIRVGRIIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVI 180
           KDAADMLDIRVGRIIKAWRH EAD+LYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRV+
Sbjct: 123 KDAADMLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVV 182

Query: 181 VLANLKPRNMRGIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAA 240
           VLANLKPRNMRGIKS GMLMAASDS+HENVELLLPPE SIPGERIWFGSED+K  QPDAA
Sbjct: 183 VLANLKPRNMRGIKSSGMLMAASDSMHENVELLLPPEDSIPGERIWFGSEDDKEKQPDAA 242

Query: 241 APNQIQKKKIWEMVQPHLKTDGCCTAVLGSHPMRTSAGVVTSTSLKHANIS 279
             NQIQKKKIWEMVQPHLKTD  CTAVLG HPMRTSAG+VT+TSLKHANIS
Sbjct: 243 TANQIQKKKIWEMVQPHLKTDASCTAVLGPHPMRTSAGLVTTTSLKHANIS 293

[Close]

BLAST of CsGy4G018360 vs. NCBI nr
Match: XP_022149397.1 (aminoacyl tRNA synthase complex-interacting multifunctional protein 1 [Momordica charantia])

HSP 1 Score: 403.7 bits (1036), Expect = 5.2e-109
Identity = 214/280 (76.43%), Postives = 227/280 (81.07%), Query Frame = 0


Query: 1   MASLPTAAVIANVAKTA--TNARFFFFFSSSLSHNFDHYLPSFAPPRTFSRFTPPLRTDN 60
           MAS PTAA IANV K A    ARF FF SSS+   FDH  P     R F  F+P L   N
Sbjct: 1   MASFPTAAAIANVTKNAGCGTARFLFFSSSSIVSKFDHCRPQ---RRAFPLFSPLLHNHN 60

Query: 61  VAGRISRNGTQFPFSFCTTASTEPVTSDASIALSSTSLDKDDDDPEKNIKDAADMLDIRV 120
            AGRISR+  +FP SFCT +S EP TSDA IA SS SL  DDDDP+K IKDAA+MLD RV
Sbjct: 61  AAGRISRDCARFPLSFCTVSSAEPATSDA-IASSSASLGTDDDDPDKKIKDAANMLDFRV 120

Query: 121 GRIIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVIVLANLKPRNMR 180
           G+IIKAWRH EAD+LYVEEVDVGEPEPRLICSGLVKYIPL+QLLDRRVIVLANLKPRNMR
Sbjct: 121 GKIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLEQLLDRRVIVLANLKPRNMR 180

Query: 181 GIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAAAPNQIQKKKIW 240
           GIKSCGMLMAASD+ HENVELLLPPEGSIPGERIWFGSEDEK  QP AA PNQIQKKK W
Sbjct: 181 GIKSCGMLMAASDASHENVELLLPPEGSIPGERIWFGSEDEKEGQPVAATPNQIQKKKTW 240

Query: 241 EMVQPHLKTDGCCTAVLGSHPMRTSAGVVTSTSLKHANIS 279
           E VQPHLKTD CC  VLG HPMRTSAG+VTSTSLK+ANIS
Sbjct: 241 ETVQPHLKTDSCCIVVLGPHPMRTSAGLVTSTSLKNANIS 276

[Close]

BLAST of CsGy4G018360 vs. TAIR10
Match: AT3G59980.1 (Nucleic acid-binding, OB-fold-like protein)

HSP 1 Score: 246.9 bits (629), Expect = 1.5e-65
Identity = 136/275 (49.45%), Postives = 174/275 (63.27%), Query Frame = 0


Query: 6   TAAVIANVAKTATNARFFFFFSSSLSHNFDHYLPSFAPPRTFSRFTPPLRTDNVAGRISR 65
           T AV     K           S  L   F  YL S +  RT +  +  LR   V     R
Sbjct: 4   TIAVFTGGLKVKAGVLAVQISSLPLRREFPRYLSS-SSRRTVAAISSSLRVSAVYNHQQR 63

Query: 66  NGTQFP--FSFCTTASTEPVTSDASIALSSTSLDKDDDDPEKNIKDAADMLDIRVGRIIK 125
           N + +P   +FCT A     T    ++   +                   LDI+VGRI+K
Sbjct: 64  NRSSWPRVATFCTAAPDAGTT----VSADESXXXXXXXXXXXXXXXXXXXLDIKVGRIVK 123

Query: 126 AWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVIVLANLKPRNMRGIKSC 185
           AW+H EAD+LYVEEVD+GE EPR+ICSGLVKY+PLD L    V+VLANLKPRNMRG+KSC
Sbjct: 124 AWQHEEADSLYVEEVDIGEAEPRIICSGLVKYVPLDLLQGASVVVLANLKPRNMRGVKSC 183

Query: 186 GMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAAAPNQIQKKKIWEMVQP 245
           GML+AASD+ HENVELL+PPEGS+PG+R+WFG+E++    P+ A PN++QKKK+WE+VQP
Sbjct: 184 GMLLAASDAAHENVELLVPPEGSVPGDRVWFGNEEDLEQLPEPAPPNKVQKKKMWELVQP 243

Query: 246 HLKTDGCCTAVLGSHPMRTSAGVVTSTSLKHANIS 279
            LKTD    ++L  H MRTS+G+VTS SL++ANIS
Sbjct: 244 LLKTDASGVSMLKEHLMRTSSGLVTSKSLRNANIS 273

[Close]

BLAST of CsGy4G018360 vs. TAIR10
Match: AT4G13780.1 (methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative)

HSP 1 Score: 124.8 bits (312), Expect = 8.4e-29
Identity = 80/186 (43.01%), Postives = 104/186 (55.91%), Query Frame = 0


Query: 92  SSTSLDKDDDDPEKNIKDAADMLDIRVGRIIKAWRHLEADTLYVEEVDVGEPEPRLICSG 151
           SS    K    P  + +     LDIRVG+I+KA +H +AD LYVEE+DVG  E R + SG
Sbjct: 617 SSKGGGKPKPQPAADREITMARLDIRVGKIVKAEKHPKADALYVEEIDVGGGEIRTVVSG 676

Query: 152 LVKYIPLDQLLDRRVIVLANLKPRNMRGIKSCGMLMAASDSLHENVELLLPPEGSIPGER 211
           LVKYIPL+++ +R V VL NLKP  MR I S  M++AAS S    VEL+ PP+ +  GER
Sbjct: 677 LVKYIPLEEMQNRMVCVLCNLKPAKMRDIVSQAMVLAASSSDGSKVELVEPPKTANIGER 736

Query: 212 IWFGSEDEKGNQPDAAAPNQIQKKKIWEMVQPHLKTDGCCTAVLGSHPMRTSAGVVTSTS 271
           + F   +  G   D   P    KKK+WE +   L T     A     P  TSAGV   +S
Sbjct: 737 VTFPGFE--GEPDDVLNP----KKKVWETLLVDLNTKENLVACYKDVPFTTSAGVCKVSS 796

Query: 272 LKHANI 278
           + +  I
Sbjct: 797 ISNGTI 796

[Close]

BLAST of CsGy4G018360 vs. TAIR10
Match: AT2G40660.1 (Nucleic acid-binding, OB-fold-like protein)

HSP 1 Score: 111.7 bits (278), Expect = 7.4e-25
Identity = 66/161 (40.99%), Postives = 91/161 (56.52%), Query Frame = 0


Query: 110 AADMLDIRVGRIIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVIVL 169
           +  +L+I+VG I KAW+H  AD+L VEE+DVGE + R + SGL K+   + L +R V ++
Sbjct: 228 SVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGEDKVRQVVSGLAKFCSPEDLTNRLVALI 287

Query: 170 ANLKPRNMRGIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAAAP 229
            N+KP  +R + S G+++ AS   H  VE LLPP G+ PGER+ F   +  G   D   P
Sbjct: 288 TNVKPGKLRDVMSQGLVLCASSEDHSVVEPLLPPAGAKPGERVSFSGIE--GKPEDVLNP 347

Query: 230 NQIQKKKIWEMVQPHLKTDGCCTAVLGSHPMRTSAGVVTST 271
               KKK  E + P L TD    A        TSAG  TS+
Sbjct: 348 ----KKKQLEKITPGLYTDENGVATYKGIQFMTSAGPCTSS 382

[Close]

BLAST of CsGy4G018360 vs. Swiss-Prot
Match: sp|O54873|AIMP1_CRIGR (Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Cricetulus griseus OX=10029 GN=AIMP1 PE=2 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 2.0e-32
Identity = 77/165 (46.67%), Postives = 102/165 (61.82%), Query Frame = 0


Query: 114 LDIRVGRIIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVIVLANLK 173
           LD+R+GRI+   +H +AD+LYVEEVDVGE  PR + SGLV ++PLDQ+ +R V++L NLK
Sbjct: 202 LDLRIGRIVTVKKHPDADSLYVEEVDVGEAAPRTVISGLVNHVPLDQMQNRMVVLLCNLK 261

Query: 174 PRNMRGIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAAAPNQIQ 233
           P  MRGI S  M+M AS    E VE+L PP GS+PG+RI F   D    +PD        
Sbjct: 262 PAKMRGILSQAMVMCASSP--EKVEILAPPNGSVPGDRITF---DAFPGEPDKELN---P 321

Query: 234 KKKIWEMVQPHLKTDGCCTAVLGSHPMRTSA-GVVTSTSLKHANI 278
           KKKIWE +QP L T+  C A     P      GV  + ++ ++ I
Sbjct: 322 KKKIWEQIQPDLHTNAECVATYKGSPFEVKGKGVCRAQTMANSGI 358

[Close]

BLAST of CsGy4G018360 vs. Swiss-Prot
Match: sp|P31230|AIMP1_MOUSE (Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Mus musculus OX=10090 GN=Aimp1 PE=1 SV=2)

HSP 1 Score: 137.9 bits (346), Expect = 1.7e-31
Identity = 76/168 (45.24%), Postives = 103/168 (61.31%), Query Frame = 0


Query: 111 ADMLDIRVGRIIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVIVLA 170
           A  LD+R+G I+ A +H +AD+LYVEEVDVGE  PR + SGLV ++PL+Q+ +R V++L 
Sbjct: 150 ASRLDLRIGCIVTAKKHPDADSLYVEEVDVGEAAPRTVVSGLVNHVPLEQMQNRMVVLLC 209

Query: 171 NLKPRNMRGIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAAAPN 230
           NLKP  MRG+ S  M+M AS    E VE+L PP GS+PG+RI F   D    +PD     
Sbjct: 210 NLKPAKMRGVLSQAMVMCASSP--EKVEILAPPNGSVPGDRITF---DAFPGEPDKELN- 269

Query: 231 QIQKKKIWEMVQPHLKTDGCCTAVLGSHPMRTSA-GVVTSTSLKHANI 278
              KKKIWE +QP L T+  C A     P      GV  + ++ ++ I
Sbjct: 270 --PKKKIWEQIQPDLHTNAECVATYKGAPFEVKGKGVCRAQTMANSGI 309

[Close]

BLAST of CsGy4G018360 vs. Swiss-Prot
Match: sp|Q4KM49|SYYC_RAT (Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3)

HSP 1 Score: 137.9 bits (346), Expect = 1.7e-31
Identity = 78/166 (46.99%), Postives = 103/166 (62.05%), Query Frame = 0


Query: 114 LDIRVGRIIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVIVLANLK 173
           LDIRVG+I+   +H +AD+LYVE++DVGE EPR + SGLV+++P ++L DR V+VL NLK
Sbjct: 368 LDIRVGKILSVEKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPKEELQDRLVVVLCNLK 427

Query: 174 PRNMRGIKSCGMLMAAS-DSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAAAPNQI 233
           P+ MRG+ S GML+ AS + +   VE L PP GS PGER+ F    EKG   +   P   
Sbjct: 428 PQKMRGVDSQGMLLCASVEGVSRQVEPLDPPAGSAPGERV-FVQGYEKGQPDEELKP--- 487

Query: 234 QKKKIWEMVQPHLKTDGCCTAVLGSHPMRTSAGVVTSTSLKHANIS 279
            KKK++E +Q   K    C A        T  G V+  SLK  NIS
Sbjct: 488 -KKKVFEKLQADFKISDDCVAQWKQTNFMTKLGFVSCKSLKGGNIS 528

[Close]

BLAST of CsGy4G018360 vs. Swiss-Prot
Match: sp|Q5R8T5|SYYC_PONAB (Tyrosine--tRNA ligase, cytoplasmic OS=Pongo abelii OX=9601 GN=YARS PE=2 SV=3)

HSP 1 Score: 137.5 bits (345), Expect = 2.3e-31
Identity = 81/180 (45.00%), Postives = 111/180 (61.67%), Query Frame = 0


Query: 100 DDDPEKNIKDAADMLDIRVGRIIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLD 159
           + +PE+ I      LDIRVG+II   +H +AD+LYVE++DVGE EPR + SGLV+++P +
Sbjct: 357 NSEPEEVI---PSRLDIRVGKIITVEKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPKE 416

Query: 160 QLLDRRVIVLANLKPRNMRGIKSCGMLMAAS-DSLHENVELLLPPEGSIPGERIWFGSED 219
           +L DR V+VL NLKP+ MRG++S GML+ AS + ++  VE L PP GS PGER+ F    
Sbjct: 417 ELQDRLVVVLCNLKPQKMRGVESQGMLLCASIEGINRQVEPLDPPAGSAPGERV-FVKGY 476

Query: 220 EKGNQPDAAAPNQIQKKKIWEMVQPHLKTDGCCTAVLGSHPMRTSAGVVTSTSLKHANIS 279
           EKG   +   P    KKK++E +Q   K    C A        T  G ++  SLK  NIS
Sbjct: 477 EKGQPDEELKP----KKKVFEKLQADFKISEECIAQWKQTNFMTKLGSISCKSLKGGNIS 528

[Close]

BLAST of CsGy4G018360 vs. Swiss-Prot
Match: sp|Q12904|AIMP1_HUMAN (Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Homo sapiens OX=9606 GN=AIMP1 PE=1 SV=2)

HSP 1 Score: 136.3 bits (342), Expect = 5.0e-31
Identity = 76/165 (46.06%), Postives = 102/165 (61.82%), Query Frame = 0


Query: 114 LDIRVGRIIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVIVLANLK 173
           LD+R+G II A +H +AD+LYVEEVDVGE  PR + SGLV ++PL+Q+ +R VI+L NLK
Sbjct: 155 LDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRMVILLCNLK 214

Query: 174 PRNMRGIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAAAPNQIQ 233
           P  MRG+ S  M+M AS    E +E+L PP GS+PG+RI F   D    +PD        
Sbjct: 215 PAKMRGVLSQAMVMCASSP--EKIEILAPPNGSVPGDRITF---DAFPGEPDKELN---P 274

Query: 234 KKKIWEMVQPHLKTDGCCTAVLGSHPMRTSA-GVVTSTSLKHANI 278
           KKKIWE +QP L T+  C A     P      GV  + ++ ++ I
Sbjct: 275 KKKIWEQIQPDLHTNDECVATYKGVPFEVKGKGVCRAQTMSNSGI 311

[Close]

BLAST of CsGy4G018360 vs. TrEMBL
Match: tr|A0A0A0L299|A0A0A0L299_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G438550 PE=4 SV=1)

HSP 1 Score: 553.1 bits (1424), Expect = 3.5e-154
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0


Query: 1   MASLPTAAVIANVAKTATNARFFFFFSSSLSHNFDHYLPSFAPPRTFSRFTPPLRTDNVA 60
           MASLPTAAVIANVAKTATNARFFFFFSSSLSHNFDHYLPSFAPPRTFSRFTPPLRTDNVA
Sbjct: 1   MASLPTAAVIANVAKTATNARFFFFFSSSLSHNFDHYLPSFAPPRTFSRFTPPLRTDNVA 60

Query: 61  GRISRNGTQFPFSFCTTASTEPVTSDASIALSSTSLDKDDDDPEKNIKDAADMLDIRVGR 120
           GRISRNGTQFPFSFCTTASTEPVTSDASIALSSTSLDKDDDDPEKNIKDAADMLDIRVGR
Sbjct: 61  GRISRNGTQFPFSFCTTASTEPVTSDASIALSSTSLDKDDDDPEKNIKDAADMLDIRVGR 120

Query: 121 IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVIVLANLKPRNMRGI 180
           IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVIVLANLKPRNMRGI
Sbjct: 121 IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVIVLANLKPRNMRGI 180

Query: 181 KSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAAAPNQIQKKKIWEM 240
           KSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAAAPNQIQKKKIWEM
Sbjct: 181 KSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAAAPNQIQKKKIWEM 240

Query: 241 VQPHLKTDGCCTAVLGSHPMRTSAGVVTSTSLKHANIS 279
           VQPHLKTDGCCTAVLGSHPMRTSAGVVTSTSLKHANIS
Sbjct: 241 VQPHLKTDGCCTAVLGSHPMRTSAGVVTSTSLKHANIS 278

[Close]

BLAST of CsGy4G018360 vs. TrEMBL
Match: tr|A0A1S3BN57|A0A1S3BN57_CUCME (aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491385 PE=4 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 6.6e-145
Identity = 262/278 (94.24%), Postives = 269/278 (96.76%), Query Frame = 0


Query: 1   MASLPTAAVIANVAKTATNARFFFFFSSSLSHNFDHYLPSFAPPRTFSRFTPPLRTDNVA 60
           MASLPTAA IANVAKTATNARFFFFFSSSLSHNFDH +P FA PRTFSRFTP LR DNVA
Sbjct: 1   MASLPTAAAIANVAKTATNARFFFFFSSSLSHNFDHCIPFFALPRTFSRFTPSLRKDNVA 60

Query: 61  GRISRNGTQFPFSFCTTASTEPVTSDASIALSSTSLDKDDDDPEKNIKDAADMLDIRVGR 120
           GRISRNGT+FPFSFCTTASTEPVTSDASIA SSTS+DK DDDPEKNIK+AADMLDIRVGR
Sbjct: 61  GRISRNGTRFPFSFCTTASTEPVTSDASIASSSTSMDKGDDDPEKNIKNAADMLDIRVGR 120

Query: 121 IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVIVLANLKPRNMRGI 180
           IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRV+VLANLKPRNMRGI
Sbjct: 121 IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVVVLANLKPRNMRGI 180

Query: 181 KSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAAAPNQIQKKKIWEM 240
           KSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAA+PNQIQKKKIWEM
Sbjct: 181 KSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAASPNQIQKKKIWEM 240

Query: 241 VQPHLKTDGCCTAVLGSHPMRTSAGVVTSTSLKHANIS 279
           VQPHLKTDGCCTAVLGSHP+RTS GVVTSTSLKHANIS
Sbjct: 241 VQPHLKTDGCCTAVLGSHPLRTSTGVVTSTSLKHANIS 278

[Close]

BLAST of CsGy4G018360 vs. TrEMBL
Match: tr|A0A1S4DYD2|A0A1S4DYD2_CUCME (aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491385 PE=4 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 1.5e-117
Identity = 217/232 (93.53%), Postives = 224/232 (96.55%), Query Frame = 0


Query: 1   MASLPTAAVIANVAKTATNARFFFFFSSSLSHNFDHYLPSFAPPRTFSRFTPPLRTDNVA 60
           MASLPTAA IANVAKTATNARFFFFFSSSLSHNFDH +P FA PRTFSRFTP LR DNVA
Sbjct: 1   MASLPTAAAIANVAKTATNARFFFFFSSSLSHNFDHCIPFFALPRTFSRFTPSLRKDNVA 60

Query: 61  GRISRNGTQFPFSFCTTASTEPVTSDASIALSSTSLDKDDDDPEKNIKDAADMLDIRVGR 120
           GRISRNGT+FPFSFCTTASTEPVTSDASIA SSTS+DK DDDPEKNIK+AADMLDIRVGR
Sbjct: 61  GRISRNGTRFPFSFCTTASTEPVTSDASIASSSTSMDKGDDDPEKNIKNAADMLDIRVGR 120

Query: 121 IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVIVLANLKPRNMRGI 180
           IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRV+VLANLKPRNMRGI
Sbjct: 121 IIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVVVLANLKPRNMRGI 180

Query: 181 KSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAAAPNQI 233
           KSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAA+PNQ+
Sbjct: 181 KSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAASPNQV 232

[Close]

BLAST of CsGy4G018360 vs. TrEMBL
Match: tr|A0A2I4G624|A0A2I4G624_9ROSI (aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Juglans regia OX=51240 GN=LOC109005022 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 5.3e-78
Identity = 169/288 (58.68%), Postives = 198/288 (68.75%), Query Frame = 0


Query: 4   LPTAAVIANVAKTATNARFFFFFSSSLSHNFDHY------LPSFAPPRTFSRFTPPLRTD 63
           LPT A  ++           F   S  SH    Y       P  +   +   F+     +
Sbjct: 7   LPTNAFASSANVLRGGGALLFSSFSKCSHPLQIYRHRRPLQPIRSSTASLPLFSIGKANE 66

Query: 64  NVAGRISRNGTQFPFSFCTTASTEPVTSDASIALSST-------SLDKDDDDPEKNIKDA 123
             AG    +   +  SFCT +     TSDAS A + T       + D DD+  E+ IK+A
Sbjct: 67  TSAGSRRSSSRHWIPSFCTAS-----TSDASAAEAVTVATGDDGNADVDDEKKERMIKEA 126

Query: 124 ADMLDIRVGRIIKAWRHLEADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVIVLA 183
           A+MLDIRVGRI++AWRH EAD+LYVEEVDVGEP+PR+ICSGLV YIPL  L D+RVIVLA
Sbjct: 127 AEMLDIRVGRILRAWRHEEADSLYVEEVDVGEPQPRIICSGLVNYIPLQHLQDKRVIVLA 186

Query: 184 NLKPRNMRGIKSCGMLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAAAPN 243
           NLKPRNMRG+KS GMLMAASD+ HENVELL+PPEGS+PGERIWFGSE+EK NQP AA PN
Sbjct: 187 NLKPRNMRGVKSSGMLMAASDASHENVELLVPPEGSLPGERIWFGSEEEKENQPAAATPN 246

Query: 244 QIQKKKIWEMVQPHLKTDGCCTAVLGSHPMRTSAGVVTSTSLKHANIS 279
           QIQKKKIWE+VQPHLKTD  CTA+LG H MRTSAGVV STSLK+ANIS
Sbjct: 247 QIQKKKIWELVQPHLKTDASCTAMLGVHVMRTSAGVVVSTSLKNANIS 289

[Close]

BLAST of CsGy4G018360 vs. TrEMBL
Match: tr|A0A2P6RHR7|A0A2P6RHR7_ROSCH (Putative nucleic acid-binding protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0084251 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 6.5e-76
Identity = 143/206 (69.42%), Postives = 168/206 (81.55%), Query Frame = 0


Query: 73  SFCTTASTEPVTSDASIALSSTSLDKDDDDPEKNIKDAADMLDIRVGRIIKAWRHLEADT 132
           SFC     E    +A  A+S      D D+ +K IKDAAD+LDIRVG +++AWRH EAD+
Sbjct: 73  SFCAATDVEKAQVEAE-AIS------DGDEEQKKIKDAADLLDIRVGLVLRAWRHEEADS 132

Query: 133 LYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVIVLANLKPRNMRGIKSCGMLMAASDS 192
           LYVEEVD+GEPEPR+ICSGLV YIP+D + +R+V+VLANLKPRNMRG+KSCGMLMAASD+
Sbjct: 133 LYVEEVDIGEPEPRIICSGLVNYIPIDHIQERKVVVLANLKPRNMRGVKSCGMLMAASDA 192

Query: 193 LHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAAAPNQIQKKKIWEMVQPHLKTDGCCT 252
            HENVELL+PPEGS+PG+RIWFGSED+  NQP  A PNQIQKKKIWE+VQPHLKTD  C 
Sbjct: 193 SHENVELLVPPEGSLPGQRIWFGSEDDHQNQPPPATPNQIQKKKIWELVQPHLKTDDTCM 252

Query: 253 AVLGSHPMRTSAGVVTSTSLKHANIS 279
           A+LG H MRTSAGV+ S SLKHANIS
Sbjct: 253 AMLGMHIMRTSAGVIISRSLKHANIS 271

The following BLAST results are available for this feature:

BLAST of CsGy4G018360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144343.1	5.3e-154	100.00	PREDICTED: aminoacyl tRNA synthase complex-interacting multifunctional protein 1...	[more]
XP_008449535.1	1.0e-144	94.24	PREDICTED: aminoacyl tRNA synthase complex-interacting multifunctional protein 1...	[more]
XP_016900725.1	2.3e-117	93.53	PREDICTED: aminoacyl tRNA synthase complex-interacting multifunctional protein 1...	[more]
XP_022966410.1	4.7e-110	75.60	aminoacyl tRNA synthase complex-interacting multifunctional protein 1 [Cucurbita...	[more]
XP_022149397.1	5.2e-109	76.43	aminoacyl tRNA synthase complex-interacting multifunctional protein 1 [Momordica...	[more]

BLAST of CsGy4G018360 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G59980.1	1.5e-65	49.45	Nucleic acid-binding, OB-fold-like protein	[more]
AT4G13780.1	8.4e-29	43.01	methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS,...	[more]
AT2G40660.1	7.4e-25	40.99	Nucleic acid-binding, OB-fold-like protein	[more]

BLAST of CsGy4G018360 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O54873\|AIMP1_CRIGR	2.0e-32	46.67	Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Cricetu...	[more]
sp\|P31230\|AIMP1_MOUSE	1.7e-31	45.24	Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Mus mus...	[more]
sp\|Q4KM49\|SYYC_RAT	1.7e-31	46.99	Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV...	[more]
sp\|Q5R8T5\|SYYC_PONAB	2.3e-31	45.00	Tyrosine--tRNA ligase, cytoplasmic OS=Pongo abelii OX=9601 GN=YARS PE=2 SV=3	[more]
sp\|Q12904\|AIMP1_HUMAN	5.0e-31	46.06	Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Homo sa...	[more]

BLAST of CsGy4G018360 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L299\|A0A0A0L299_CUCSA	3.5e-154	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G438550 PE=4 SV=1	[more]
tr\|A0A1S3BN57\|A0A1S3BN57_CUCME	6.6e-145	94.24	aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X1...	[more]
tr\|A0A1S4DYD2\|A0A1S4DYD2_CUCME	1.5e-117	93.53	aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X2...	[more]
tr\|A0A2I4G624\|A0A2I4G624_9ROSI	5.3e-78	58.68	aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Juglans...	[more]
tr\|A0A2P6RHR7\|A0A2P6RHR7_ROSCH	6.5e-76	69.42	Putative nucleic acid-binding protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0000049	tRNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR012340	NA-bd_OB-fold
IPR002547	tRNA-bd_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0000049	tRNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G018360.1	CsGy4G018360.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002547	tRNA-binding domain	PFAM	PF01588	tRNA_bind	coord: 116..210 e-value: 2.2E-26 score: 91.7
IPR002547	tRNA-binding domain	PROSITE	PS50886	TRBD	coord: 110..213 score: 30.023
None	No IPR available	GENE3D	G3DSA:2.40.50.140		coord: 109..278 e-value: 1.3E-57 score: 196.3
None	No IPR available	PANTHER	PTHR11586	FAMILY NOT NAMED	coord: 101..278
None	No IPR available	PANTHER	PTHR11586:SF33	AMINOACYL TRNA SYNTHASE COMPLEX-INTERACTING MULTIFUNCTIONAL PROTEIN 1	coord: 101..278
None	No IPR available	CDD	cd02799	tRNA_bind_EMAP-II_like	coord: 109..213 e-value: 8.63322E-60 score: 186.665
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	SSF50249	Nucleic acid-binding proteins	coord: 110..277

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy4G018360	Csa4G438550	Cucumber (Chinese Long) v2	cgybcuB167
CsGy4G018360	MELO3C003269	Melon (DHL92) v3.5.1	cgybmeB281
CsGy4G018360	ClCG04G002910	Watermelon (Charleston Gray)	cgybwcgB283
CsGy4G018360	CSPI04G19480	Wild cucumber (PI 183967)	cgybcpiB170
CsGy4G018360	CmaCh07G013730	Cucurbita maxima (Rimu)	cgybcmaB570
CsGy4G018360	CmoCh07G014130	Cucurbita moschata (Rifu)	cgybcmoB544
CsGy4G018360	Cp4.1LG19g00040	Cucurbita pepo (Zucchini)	cgybcpeB525
CsGy4G018360	MELO3C003269.2	Melon (DHL92) v3.6.1	cgybmedB282
CsGy4G018360	CsaV3_4G029850	Cucumber (Chinese Long) v3	cgybcucB171
CsGy4G018360	Cla97C04G070280	Watermelon (97103) v2	cgybwmbB283
CsGy4G018360	Bhi03G002301	Wax gourd	cgybwgoB375
CsGy4G018360	Carg21093	Silver-seed gourd	carcgybB0482

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy4G018360	Watermelon (97103) v2	cgybwmbB288
CsGy4G018360	Cucurbita maxima (Rimu)	cgybcmaB534
CsGy4G018360	Cucurbita maxima (Rimu)	cgybcmaB530
CsGy4G018360	Cucurbita moschata (Rifu)	cgybcmoB511
CsGy4G018360	Cucurbita pepo (Zucchini)	cgybcpeB465
CsGy4G018360	Cucurbita pepo (Zucchini)	cgybcpeB466
CsGy4G018360	Bottle gourd (USVL1VR-Ls)	cgyblsiB238
CsGy4G018360	Silver-seed gourd	carcgybB0521