CsGy4G018250 (gene) Cucumber (Gy14) v2

Overview
NameCsGy4G018250
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptiontranscription factor bHLH101-like
LocationChr4 : 23714546 .. 23717157 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGACGGATCACGACGGGAGTGGTCACGGCGTAATGGAGCCGTTCTTTCAGTTCTCATCATTGCAGCCATCTCAACAGGTCAAGCTAGAGAGCTGTCCTACCCCATTATCGGCTGGTGTCGTTGCTGACGATATCACTGACATGGCTAAGAAACTTAAACACAATGCTAACGAGCGCGACCGTCGAAGAAAGATCAACTCGCTCTATTGTTCTCTCCGTTGCTTGCTCCCTCCTACAGATTCAATGGTAGGTTTTGCTTCGTATGATATATCTTATCTTCTATCACCTTTTGGGTGTGCCAAATAACCATTTTCTCCTTTATCTAATTTGAGCTTAAAACACATTTTTTTGTCACCTTATATTTTTATGGAATCAATCTATGAGCTTTTACTTTCTAATCAACTGTTTGTATTTTCAAATTTGTTACAGTTAGTCTCTCTTTGTAAACAATTTATATACTCTAAGCTTTAATGAGTATCCATTGTCGAGATCAACCACTGTCCTGTCCTGAAAGCAATTACGACAAATCGAGGTGTCAATCCTGATGTCGGTTGTTCCTCAAGGTTAACATAGCAATCCTATTCAGAAATATACTCGTCGGAACAGGGAATAGAAACAAAATCAAGTTCCTCATAACGAAAAAGCAAGACAGAGTCAAGAGTTTTAGAGATCAGACAATACATATATAATTTTTTATGATACCAAAACTGATGAGGATGATCACATATAAAGAGGAAGGAGAGAAGCTCAATGAGGGCCGAAGAAACTAAAAATTTAATTACAAAACATAAGGTAATTAGGACTCGTTTGGTAACATTCTCGTTCTTTGTTTCCTGATTTTGCTTTTATTTTTTAAGAAACAGACGTGTTTGATAATCGTTCCTTGTTTCTCATTCTAAAAAAGAGTAAAAACGTTTTAAATTTTATAAGGAGTTATTGAAAACATAAAAAGTAGTTTATCCGAATTCGTTTCACAATTATTTTTATTAGTTTTCTTTTCTTTTTTTTCAATTATTTTTATCGATTTCCTTTTACTTTTTTCAATTATTTTTATTGGTTTCAATTATGCTTATTTTATTGGAGTTATTGAAAACATAAACATTTATAATTTTTGGTTTAGGATAAGAAAATGGACATGGTCCATCAAGAAAAAACTTTTTTACACGAAGTACAAAATTCGAACCCTCGTTAACATGCTCAGAAAACATGATATTCAACAATAATATTCTTAAATCTTTACTAATTTTTTCCAATTATTACTTTCTATTCAATAATAATACAATAGTACTTTTTTAAAAGTTAACTATTGTAATTATAATTAGATTGAAATAAGTGATTTTATCAAAATTAAATTAGTTATTGTGTTCAACGTTAATGAGTTGAACTGAAAGTTTGTAATTTATGGTTTTTAAAATTTGTAGAAGGTGTAGAAGGTGGACATGCACTTAGTTCGTGTGGACACTTGTATGTACCTGTGGACAAGAGGTCCCGAGTTTAAATCCTCACTCCTACATTAAAAATTTGTAGAAGTTGTTTATAAATTTGGATTTCAATGTTACAATTGTTAGTACAAGAATCATTGAGGCACGGAGCTAAGGTGGGTATGGAAAAGAAAAGGAGTAGGAAAAAAAAAGGGTTTTTATGGCATGTTTTGACTAGTTTTCTTGATGGTCGGGCTTTTTTGATATCTACCTACTTGATATGAAAAGACTATCAAAGAAGACATTTTTTTTACATGCTTTGCACATCAAAGAAGGCCAAATTTGTAGTAGTAGTTCTAAAGATTTTGGAATTTTACAAAATTGCTCCAAGCTAAGCACACCGAAAAAGAAAGTGCACCTTGTTGGTATAGATGTGACATTCAATTCTTTTAAATCTTTATTAACCTTATTTTCATATCCTCAATATCCCTTTTATTCGAATGTAATATTGGTTCATTCATGTCTCCCTTCTAAAATTGGAGTGTTTCATGAGCTTAAGAAAAAAAATTCATATGGATTAACTTAAGAAATCTTTTTTTATCGAAAACTAATTTTTTTAAAACTATTTTGATAAAGGTTGTGCAAAATACACTCCAAAAGTTATTTTGTGAGTTGTCGTCAAACGCTCTAATTTTTTTCAAAATAACTTATTTTTTTAAATTAAACACTTGAAAAGACATTCTAAATAAATTCTTATTTTACAAACTCCAACATTTTATCAAATTTTAGTTTAAGAGGTTGGTAAATACTTTTGAGTATTTTCCAAAAATGATTTTTTAAAAAAAAAAAATTTAACATTTGAAAATATATGCACACATACTTACATATTCTTAAGATAACGTTTTTTTTTTTTTTTTGCCCTCAAGAATAGAATAGTAATTTAGAAAGCTGATCCAAATAATCTACCTTAATTCTTTTTTATCACCTAATGGTTATGACACAGAAAAGAATGAGTAATCCAAGCACAATATCAAAGGCATTGAAGTACATTCCAGAGCTTCAACAGCAAGTGGAGGGATTAAGGAGAAGGAAGGAAGGCCTTGTCACAAAGCTTAATGAAGAAAATTTAAAGCAAATAAGAAAGAACAATAAGGAACCATGGATGAGTTCGTTTTGTGCTGTGAATTGGCTT

mRNA sequence

GGACGGATCACGACGGGAGTGGTCACGGCGTAATGGAGCCGTTCTTTCAGTTCTCATCATTGCAGCCATCTCAACAGGTCAAGCTAGAGAGCTGTCCTACCCCATTATCGGCTGGTGTCGTTGCTGACGATATCACTGACATGGCTAAGAAACTTAAACACAATGCTAACGAGCGCGACCGTCGAAGAAAGATCAACTCGCTCTATTGTTCTCTCCGTTGCTTGCTCCCTCCTACAGATTCAATGAAAAGAATGAGTAATCCAAGCACAATATCAAAGGCATTGAAGTACATTCCAGAGCTTCAACAGCAAGTGGAGGGATTAAGGAGAAGGAAGGAAGGCCTTGTCACAAAGCTTAATGAAGAAAATTTAAAGCAAATAAGAAAGAACAATAAGGAACCATGGATGAGTTCGTTTTGTGCTGTGAATTGGCTT

Coding sequence (CDS)

ATGGAGCCGTTCTTTCAGTTCTCATCATTGCAGCCATCTCAACAGGTCAAGCTAGAGAGCTGTCCTACCCCATTATCGGCTGGTGTCGTTGCTGACGATATCACTGACATGGCTAAGAAACTTAAACACAATGCTAACGAGCGCGACCGTCGAAGAAAGATCAACTCGCTCTATTGTTCTCTCCGTTGCTTGCTCCCTCCTACAGATTCAATGAAAAGAATGAGTAATCCAAGCACAATATCAAAGGCATTGAAGTACATTCCAGAGCTTCAACAGCAAGTGGAGGGATTAAGGAGAAGGAAGGAAGGCCTTGTCACAAAGCTTAATGAAGAAAATTTAAAGCAAATAAGAAAGAACAATAAGGAACCATGGATGAGTTCGTTTTGTGCTGTGAATTGGCTT

Protein sequence

MEPFFQFSSLQPSQQVKLESCPTPLSAGVVADDITDMAKKLKHNANERDRRRKINSLYCSLRCLLPPTDSMKRMSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNNKEPWMSSFCAVNWL
Homology
[Close]
BLAST of CsGy4G018250 vs. NCBI nr
Match: XP_004144366.2 (PREDICTED: transcription factor bHLH101-like [Cucumis sativus])

HSP 1 Score: 269.6 bits (688), Expect = 5.6e-69
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0 

Query: 1   MEPFFQFSSLQPSQQVKLESCPTPLSAGVVADDITDMAKKLKHNANERDRRRKINSLYCS 60
           MEPFFQFSSLQPSQQVKLESCPTPLSAGVVADDITDMAKKLKHNANERDRRRKINSLYCS
Sbjct: 1   MEPFFQFSSLQPSQQVKLESCPTPLSAGVVADDITDMAKKLKHNANERDRRRKINSLYCS 60

Query: 61  LRCLLPPTDSMKRMSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNN 120
           LRCLLPPTDSMKRMSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNN
Sbjct: 61  LRCLLPPTDSMKRMSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNN 120

Query: 121 KEPWMSSFCAVNWL 135
           KEPWMSSFCAVNWL
Sbjct: 121 KEPWMSSFCAVNWL 134

[Close]
BLAST of CsGy4G018250 vs. NCBI nr
Match: XP_008455701.1 (PREDICTED: transcription factor bHLH101-like [Cucumis melo])

HSP 1 Score: 251.1 bits (640), Expect = 2.1e-63
Identity = 127/134 (94.78%), Postives = 128/134 (95.52%), Query Frame = 0 

Query: 1   MEPFFQFSSLQPSQQVKLESCPTPLSAGVVADDITDMAKKLKHNANERDRRRKINSLYCS 60
           MEPF+QFSSLQPSQQVKLESCPT LSAGVV DDIT M KKLKHNANERDRRRKINSLY S
Sbjct: 1   MEPFYQFSSLQPSQQVKLESCPTLLSAGVVGDDITAMDKKLKHNANERDRRRKINSLYYS 60

Query: 61  LRCLLPPTDSMKRMSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNN 120
           LRCLLPPTDSMKRMSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNN
Sbjct: 61  LRCLLPPTDSMKRMSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNN 120

Query: 121 KEPWMSSFCAVNWL 135
           KEPWMSS CAVNWL
Sbjct: 121 KEPWMSSLCAVNWL 134

[Close]
BLAST of CsGy4G018250 vs. NCBI nr
Match: XP_022966445.1 (transcription factor bHLH101-like [Cucurbita maxima])

HSP 1 Score: 161.0 bits (406), Expect = 2.8e-36
Identity = 89/145 (61.38%), Postives = 104/145 (71.72%), Query Frame = 0 

Query: 2   EPFFQFSSLQPSQQVKLESCPTPLS--------AGVVADDITDMAKKLKHNANERDRRRK 61
           E F QFSS QPS  VK+ESC  P +         G  +DD   +AKKLKHNA+ERDRR+K
Sbjct: 29  ELFIQFSSPQPSHHVKVESCSPPSAGDGRHRGGGGFGSDDPVAVAKKLKHNASERDRRKK 88

Query: 62  INSLYCSLRCLLPPTDSMKRMSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLN---E 121
           +NSLY SLRCLLP T+  K MSNP+TIS+ALKYIPEL+QQVE LRRRK+GL TK+N    
Sbjct: 89  MNSLYTSLRCLLPSTNRTKTMSNPATISRALKYIPELRQQVEELRRRKQGLETKINAITH 148

Query: 122 ENLKQIRKNNKEPWMS-SFCAVNWL 135
           +  KQ+RKN   PWM  S CAVNWL
Sbjct: 149 DQQKQVRKNKDAPWMGCSSCAVNWL 173

[Close]
BLAST of CsGy4G018250 vs. NCBI nr
Match: XP_022925194.1 (transcription factor bHLH101-like [Cucurbita moschata])

HSP 1 Score: 157.9 bits (398), Expect = 2.4e-35
Identity = 87/145 (60.00%), Postives = 103/145 (71.03%), Query Frame = 0 

Query: 2   EPFFQFSSLQPSQQVKLESCPTPLS--------AGVVADDITDMAKKLKHNANERDRRRK 61
           E F QFSS +PS  VK+ESC  P +         G   DD   +AKKLKHNA+ERDRR+K
Sbjct: 29  ELFIQFSSPRPSHHVKVESCSPPSAGDGRHRGGGGCGGDDPVAVAKKLKHNASERDRRKK 88

Query: 62  INSLYCSLRCLLPPTDSMKRMSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLN---E 121
           +NSLY SLRCLLP T+  K MSNP+TIS+ALKYIPEL+Q VE LRRRK+GL TK+N    
Sbjct: 89  MNSLYTSLRCLLPSTNRTKTMSNPATISRALKYIPELRQHVEELRRRKQGLETKINAITH 148

Query: 122 ENLKQIRKNNKEPWMS-SFCAVNWL 135
           +  KQ+RKN + PWM  S CAVNWL
Sbjct: 149 DQQKQVRKNKEAPWMGCSSCAVNWL 173

[Close]
BLAST of CsGy4G018250 vs. NCBI nr
Match: XP_023518049.1 (transcription factor bHLH101-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 148.7 bits (374), Expect = 1.4e-32
Identity = 84/145 (57.93%), Postives = 98/145 (67.59%), Query Frame = 0 

Query: 2   EPFFQFSSLQPSQQVKLESCPTPLSAGVVADDITD--------MAKKLKHNANERDRRRK 61
           E F QFSS QPS  VK+ESC                       +AKKLKHNA+ERDRR+K
Sbjct: 26  ELFIQFSSPQPSHHVKVESCSPXXXXXXXXXXXXXXXXXXXXAVAKKLKHNASERDRRKK 85

Query: 62  INSLYCSLRCLLPPTDSMKRMSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLN---E 121
           +NSLY SLRCLLP T+  K MSNP+TIS+ALKYIPEL+Q VE LRRRK+GL TK+N    
Sbjct: 86  MNSLYTSLRCLLPSTNRTKTMSNPATISRALKYIPELRQHVEELRRRKQGLETKINAMTH 145

Query: 122 ENLKQIRKNNKEPWMS-SFCAVNWL 135
           +  KQ+RKN + PWM  S CAVNWL
Sbjct: 146 DQQKQVRKNKEAPWMGCSSCAVNWL 170

[Close]
BLAST of CsGy4G018250 vs. TAIR10
Match: AT3G56970.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 87.4 bits (215), Expect = 7.2e-18
Identity = 44/84 (52.38%), Postives = 63/84 (75.00%), Query Frame = 0 

Query: 26  SAGVVADDITDMAKKLKHNANERDRRRKINSLYCSLRCLLPPTDSMKRMSNPSTISKALK 85
           S G   D+   + KKL HNA+ERDRR+KIN+L+ SLR  LP +D  K++S P T+SK+LK
Sbjct: 59  SEGNEIDNNPVVVKKLNHNASERDRRKKINTLFSSLRSCLPASDQSKKLSIPETVSKSLK 118

Query: 86  YIPELQQQVEGLRRRKEGLVTKLN 110
           YIPELQQQV+ L ++KE ++ +++
Sbjct: 119 YIPELQQQVKRLIQKKEEILVRVS 142

[Close]
BLAST of CsGy4G018250 vs. TAIR10
Match: AT3G56980.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 86.3 bits (212), Expect = 1.6e-17
Identity = 44/84 (52.38%), Postives = 63/84 (75.00%), Query Frame = 0 

Query: 26  SAGVVADDITDMAKKLKHNANERDRRRKINSLYCSLRCLLPPTDSMKRMSNPSTISKALK 85
           S G   D+   + KKL HNA+ERDRRRKINSL+ SLR  LP +   K++S P+T+S++LK
Sbjct: 64  SEGNEIDNNPVVVKKLNHNASERDRRRKINSLFSSLRSCLPASGQSKKLSIPATVSRSLK 123

Query: 86  YIPELQQQVEGLRRRKEGLVTKLN 110
           YIPELQ+QV+ L ++KE L+ +++
Sbjct: 124 YIPELQEQVKKLIKKKEELLVQIS 147

[Close]
BLAST of CsGy4G018250 vs. TAIR10
Match: AT5G04150.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 85.5 bits (210), Expect = 2.7e-17
Identity = 44/103 (42.72%), Postives = 69/103 (66.99%), Query Frame = 0 

Query: 37  MAKKLKHNANERDRRRKINSLYCSLRCLLPPTDSMKRMSNPSTISKALKYIPELQQQVEG 96
           + KKL HNA+ERDRRRK+N+LY SLR LLP +D  +++S P T+++ +KYIPE +Q+++ 
Sbjct: 64  LEKKLNHNASERDRRRKLNALYSSLRALLPLSDQKRKLSIPMTVARVVKYIPEQKQELQR 123

Query: 97  LRRRKEGLVTKLNEENLKQIRKNNK-----EPWMSSFCAVNWL 135
           L RRKE L+ +++ +  ++  +N       +   S   A NWL
Sbjct: 124 LSRRKEELLKRISRKTHQEQLRNKAMMDSIDSSSSQRIAANWL 166

[Close]
BLAST of CsGy4G018250 vs. TAIR10
Match: AT2G41240.1 (basic helix-loop-helix protein 100)

HSP 1 Score: 80.9 bits (198), Expect = 6.7e-16
Identity = 42/84 (50.00%), Postives = 65/84 (77.38%), Query Frame = 0 

Query: 39  KKLKHNANERDRRRKINSLYCSLRCLLPPTDSMKRMSNPSTISKALKYIPELQQQVEGLR 98
           KKL HNA+ER+RR+KIN+++ SLR  LPPT+  K++S  +T+S+ALKYIPELQ+QV+ L 
Sbjct: 62  KKLNHNASERERRKKINTMFSSLRSCLPPTNQTKKLSVSATVSQALKYIPELQEQVKKLM 121

Query: 99  RRKEGLVTKLN-EENLKQIRKNNK 122
           ++KE L  +++ + +L    +N+K
Sbjct: 122 KKKEELSFQISGQRDLVYTDQNSK 145

[Close]
BLAST of CsGy4G018250 vs. TAIR10
Match: AT1G71200.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 52.8 bits (125), Expect = 2.0e-07
Identity = 32/71 (45.07%), Postives = 43/71 (60.56%), Query Frame = 0 

Query: 38  AKKLKHNANERDRRRKINSLYCSLRCLLP---PTDSMKRMSNPSTISKALKYIPELQQQV 97
           AKK  HNA ER RR ++++ Y +L  LLP    + S K+ S PS I   + YIP+LQ +V
Sbjct: 60  AKKQDHNAKERLRRMRLHASYLTLGTLLPDHSSSSSKKKWSAPSIIDNVITYIPKLQNEV 119

Query: 98  EGLRRRKEGLV 106
             L  RK+ LV
Sbjct: 120 GELTLRKQKLV 130

[Close]
BLAST of CsGy4G018250 vs. Swiss-Prot
Match: sp|Q9M1K1|ORG2_ARATH (Transcription factor ORG2 OS=Arabidopsis thaliana OX=3702 GN=ORG2 PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.3e-16
Identity = 44/84 (52.38%), Postives = 63/84 (75.00%), Query Frame = 0 

Query: 26  SAGVVADDITDMAKKLKHNANERDRRRKINSLYCSLRCLLPPTDSMKRMSNPSTISKALK 85
           S G   D+   + KKL HNA+ERDRR+KIN+L+ SLR  LP +D  K++S P T+SK+LK
Sbjct: 59  SEGNEIDNNPVVVKKLNHNASERDRRKKINTLFSSLRSCLPASDQSKKLSIPETVSKSLK 118

Query: 86  YIPELQQQVEGLRRRKEGLVTKLN 110
           YIPELQQQV+ L ++KE ++ +++
Sbjct: 119 YIPELQQQVKRLIQKKEEILVRVS 142

[Close]
BLAST of CsGy4G018250 vs. Swiss-Prot
Match: sp|Q9M1K0|ORG3_ARATH (Transcription factor ORG3 OS=Arabidopsis thaliana OX=3702 GN=ORG3 PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.9e-16
Identity = 44/84 (52.38%), Postives = 63/84 (75.00%), Query Frame = 0 

Query: 26  SAGVVADDITDMAKKLKHNANERDRRRKINSLYCSLRCLLPPTDSMKRMSNPSTISKALK 85
           S G   D+   + KKL HNA+ERDRRRKINSL+ SLR  LP +   K++S P+T+S++LK
Sbjct: 64  SEGNEIDNNPVVVKKLNHNASERDRRRKINSLFSSLRSCLPASGQSKKLSIPATVSRSLK 123

Query: 86  YIPELQQQVEGLRRRKEGLVTKLN 110
           YIPELQ+QV+ L ++KE L+ +++
Sbjct: 124 YIPELQEQVKKLIKKKEELLVQIS 147

[Close]
BLAST of CsGy4G018250 vs. Swiss-Prot
Match: sp|Q9FYE6|BH101_ARATH (Transcription factor bHLH101 OS=Arabidopsis thaliana OX=3702 GN=BHLH101 PE=1 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 4.9e-16
Identity = 44/103 (42.72%), Postives = 69/103 (66.99%), Query Frame = 0 

Query: 37  MAKKLKHNANERDRRRKINSLYCSLRCLLPPTDSMKRMSNPSTISKALKYIPELQQQVEG 96
           + KKL HNA+ERDRRRK+N+LY SLR LLP +D  +++S P T+++ +KYIPE +Q+++ 
Sbjct: 64  LEKKLNHNASERDRRRKLNALYSSLRALLPLSDQKRKLSIPMTVARVVKYIPEQKQELQR 123

Query: 97  LRRRKEGLVTKLNEENLKQIRKNNK-----EPWMSSFCAVNWL 135
           L RRKE L+ +++ +  ++  +N       +   S   A NWL
Sbjct: 124 LSRRKEELLKRISRKTHQEQLRNKAMMDSIDSSSSQRIAANWL 166

[Close]
BLAST of CsGy4G018250 vs. Swiss-Prot
Match: sp|A2WZ60|IRO2_ORYSI (Protein IRON-RELATED TRANSCRIPTION FACTOR 2 OS=Oryza sativa subsp. indica OX=39946 GN=IRO2 PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 4.9e-16
Identity = 41/68 (60.29%), Postives = 53/68 (77.94%), Query Frame = 0 

Query: 39  KKLKHNANERDRRRKINSLYCSLRCLLPPTDSMKRMSNPSTISKALKYIPELQQQVEGLR 98
           +KL HNA ERDRR+++N LY SLR LLP  D  K++S P+T+S+ LKYIPELQ+QVE L 
Sbjct: 69  RKLSHNAYERDRRKQLNELYSSLRALLPDADHTKKLSIPTTVSRVLKYIPELQKQVENLE 128

Query: 99  RRKEGLVT 107
           R+K+ L T
Sbjct: 129 RKKKELTT 136

[Close]
BLAST of CsGy4G018250 vs. Swiss-Prot
Match: sp|Q9ZVB5|BH100_ARATH (Transcription factor bHLH100 OS=Arabidopsis thaliana OX=3702 GN=BHLH100 PE=1 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.2e-14
Identity = 42/84 (50.00%), Postives = 65/84 (77.38%), Query Frame = 0 

Query: 39  KKLKHNANERDRRRKINSLYCSLRCLLPPTDSMKRMSNPSTISKALKYIPELQQQVEGLR 98
           KKL HNA+ER+RR+KIN+++ SLR  LPPT+  K++S  +T+S+ALKYIPELQ+QV+ L 
Sbjct: 62  KKLNHNASERERRKKINTMFSSLRSCLPPTNQTKKLSVSATVSQALKYIPELQEQVKKLM 121

Query: 99  RRKEGLVTKLN-EENLKQIRKNNK 122
           ++KE L  +++ + +L    +N+K
Sbjct: 122 KKKEELSFQISGQRDLVYTDQNSK 145

[Close]
BLAST of CsGy4G018250 vs. TrEMBL
Match: tr|A0A1S3C1M0|A0A1S3C1M0_CUCME (transcription factor bHLH101-like OS=Cucumis melo OX=3656 GN=LOC103495812 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.4e-63
Identity = 127/134 (94.78%), Postives = 128/134 (95.52%), Query Frame = 0 

Query: 1   MEPFFQFSSLQPSQQVKLESCPTPLSAGVVADDITDMAKKLKHNANERDRRRKINSLYCS 60
           MEPF+QFSSLQPSQQVKLESCPT LSAGVV DDIT M KKLKHNANERDRRRKINSLY S
Sbjct: 1   MEPFYQFSSLQPSQQVKLESCPTLLSAGVVGDDITAMDKKLKHNANERDRRRKINSLYYS 60

Query: 61  LRCLLPPTDSMKRMSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNN 120
           LRCLLPPTDSMKRMSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNN
Sbjct: 61  LRCLLPPTDSMKRMSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNN 120

Query: 121 KEPWMSSFCAVNWL 135
           KEPWMSS CAVNWL
Sbjct: 121 KEPWMSSLCAVNWL 134

[Close]
BLAST of CsGy4G018250 vs. TrEMBL
Match: tr|A0A0A0KYH3|A0A0A0KYH3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G434980 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 7.8e-27
Identity = 63/65 (96.92%), Postives = 64/65 (98.46%), Query Frame = 0 

Query: 70  SMKRMSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNNKEPWMSSFC 129
           + KRMSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNNKEPWMSSFC
Sbjct: 4   TQKRMSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNNKEPWMSSFC 63

Query: 130 AVNWL 135
           AVNWL
Sbjct: 64  AVNWL 68

[Close]
BLAST of CsGy4G018250 vs. TrEMBL
Match: tr|A0A2P5ETM5|A0A2P5ETM5_9ROSA (Basic helix-loop-helix transcription factor OS=Trema orientalis OX=63057 GN=TorBHLH53 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 3.5e-19
Identity = 53/87 (60.92%), Postives = 69/87 (79.31%), Query Frame = 0 

Query: 23  TPLSAGVVADDITDMAKKLKHNANERDRRRKINSLYCSLRCLLPPTDSMKRMSNPSTISK 82
           TP +   +  D++ M KKL HNA+ERDRR+KIN LY SLR LLP +D MK++S P+T+S+
Sbjct: 65  TPSNYTTINSDLS-MVKKLNHNASERDRRKKINHLYSSLRTLLPASDHMKKLSIPATVSR 124

Query: 83  ALKYIPELQQQVEGLRRRKEGLVTKLN 110
            LKYIPELQQQVEGL R++E L++KLN
Sbjct: 125 VLKYIPELQQQVEGLVRKREELLSKLN 150

[Close]
BLAST of CsGy4G018250 vs. TrEMBL
Match: tr|D7TF07|D7TF07_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_13s0047g00450 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.0e-18
Identity = 61/110 (55.45%), Postives = 79/110 (71.82%), Query Frame = 0 

Query: 2   EPFFQFSSLQPSQQVKLESCPTPLSAGVVADDITDMAKKLKHNANERDRRRKINSLYCSL 61
           E F   SS QP  QV+L +C TP SA V  +    M KKL HNA+ERDRR+KINSLY S+
Sbjct: 35  ESFLHLSSSQP--QVEL-NCSTP-SAAVRGN--PTMVKKLNHNASERDRRKKINSLYSSM 94

Query: 62  RCLLPPTDSMKRMSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEE 112
           R LLP  D +K++S PST+S+ LKYIPELQ+QVE L ++KE  ++K++ E
Sbjct: 95  RSLLPSADQVKKLSIPSTVSRVLKYIPELQRQVERLIQKKEEFLSKISRE 138

[Close]
BLAST of CsGy4G018250 vs. TrEMBL
Match: tr|A0A2R6RU15|A0A2R6RU15_ACTCH (Transcription factor like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc03911 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.3e-18
Identity = 53/98 (54.08%), Postives = 72/98 (73.47%), Query Frame = 0 

Query: 37  MAKKLKHNANERDRRRKINSLYCSLRCLLPPTDSMKRMSNPSTISKALKYIPELQQQVEG 96
           MAKKL HNA+ERDRR++INSLY SLR LLP  D MK++S P+T+S+ LKYIPELQ++VEG
Sbjct: 73  MAKKLNHNASERDRRKRINSLYSSLRSLLPAADQMKKLSIPATVSRVLKYIPELQREVEG 132

Query: 97  LRRRKEGLVTKLN--EENLKQIRKNNKEPWMSSFCAVN 133
           L  +KE L +++N  +E+L  +    K    SS  A++
Sbjct: 133 LIHKKEELTSRINSRQEDLVTLESRRKCMTRSSISAIS 170

The following BLAST results are available for this feature:
BLAST of CsGy4G018250 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004144366.25.6e-69100.00PREDICTED: transcription factor bHLH101-like [Cucumis sativus][more]
XP_008455701.12.1e-6394.78PREDICTED: transcription factor bHLH101-like [Cucumis melo][more]
XP_022966445.12.8e-3661.38transcription factor bHLH101-like [Cucurbita maxima][more]
XP_022925194.12.4e-3560.00transcription factor bHLH101-like [Cucurbita moschata][more]
XP_023518049.11.4e-3257.93transcription factor bHLH101-like [Cucurbita pepo subsp. pepo][more]
BLAST of CsGy4G018250 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G56970.17.2e-1852.38basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT3G56980.11.6e-1752.38basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT5G04150.12.7e-1742.72basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT2G41240.16.7e-1650.00basic helix-loop-helix protein 100[more]
AT1G71200.12.0e-0745.07basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
BLAST of CsGy4G018250 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9M1K1|ORG2_ARATH1.3e-1652.38Transcription factor ORG2 OS=Arabidopsis thaliana OX=3702 GN=ORG2 PE=1 SV=1[more]
sp|Q9M1K0|ORG3_ARATH2.9e-1652.38Transcription factor ORG3 OS=Arabidopsis thaliana OX=3702 GN=ORG3 PE=1 SV=1[more]
sp|Q9FYE6|BH101_ARATH4.9e-1642.72Transcription factor bHLH101 OS=Arabidopsis thaliana OX=3702 GN=BHLH101 PE=1 SV=... [more]
sp|A2WZ60|IRO2_ORYSI4.9e-1660.29Protein IRON-RELATED TRANSCRIPTION FACTOR 2 OS=Oryza sativa subsp. indica OX=399... [more]
sp|Q9ZVB5|BH100_ARATH1.2e-1450.00Transcription factor bHLH100 OS=Arabidopsis thaliana OX=3702 GN=BHLH100 PE=1 SV=... [more]
BLAST of CsGy4G018250 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C1M0|A0A1S3C1M0_CUCME1.4e-6394.78transcription factor bHLH101-like OS=Cucumis melo OX=3656 GN=LOC103495812 PE=4 S... [more]
tr|A0A0A0KYH3|A0A0A0KYH3_CUCSA7.8e-2796.92Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G434980 PE=4 SV=1[more]
tr|A0A2P5ETM5|A0A2P5ETM5_9ROSA3.5e-1960.92Basic helix-loop-helix transcription factor OS=Trema orientalis OX=63057 GN=TorB... [more]
tr|D7TF07|D7TF07_VITVI1.0e-1855.45Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_13s0047g00450 PE=4 SV=... [more]
tr|A0A2R6RU15|A0A2R6RU15_ACTCH2.3e-1854.08Transcription factor like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CE... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0046983protein dimerization activity
Vocabulary: Biological Process
TermDefinition
GO:0006357regulation of transcription from RNA polymerase II promoter
Vocabulary: INTERPRO
TermDefinition
IPR015660MASH1/Ascl1a-like
IPR036638HLH_DNA-bd_sf
IPR011598bHLH_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006357 regulation of transcription from RNA polymerase II promoter
cellular_component GO:0090575 RNA polymerase II transcription factor complex
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy4G018250.1CsGy4G018250.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 87..114
NoneNo IPR availablePANTHERPTHR13935:SF41HELIX LOOP HELIXcoord: 9..120
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 44..96
e-value: 8.8E-8
score: 41.9
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 39..91
e-value: 1.7E-12
score: 47.0
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 38..90
score: 14.195
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainCDDcd00083HLHcoord: 39..95
e-value: 4.5248E-11
score: 53.7571
IPR036638Helix-loop-helix DNA-binding domain superfamilyGENE3DG3DSA:4.10.280.10coord: 31..122
e-value: 1.1E-14
score: 56.1
IPR036638Helix-loop-helix DNA-binding domain superfamilySUPERFAMILYSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 38..107
IPR015660Achaete-scute transcription factor-relatedPANTHERPTHR13935ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATEDcoord: 9..120

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy4G018250MELO3C019063Melon (DHL92) v3.5.1cgybmeB286
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy4G018250Cucurbita maxima (Rimu)cgybcmaB534
CsGy4G018250Cucurbita moschata (Rifu)cgybcmoB502
CsGy4G018250Cucurbita pepo (Zucchini)cgybcpeB466
CsGy4G018250Cucumber (Chinese Long) v2cgybcuB167
CsGy4G018250Bottle gourd (USVL1VR-Ls)cgyblsiB237
CsGy4G018250Melon (DHL92) v3.6.1cgybmedB286
CsGy4G018250Watermelon (97103) v1cgybwmB312
CsGy4G018250Wild cucumber (PI 183967)cgybcpiB170
CsGy4G018250Cucumber (Chinese Long) v3cgybcucB171
CsGy4G018250Wax gourdcgybwgoB389