CsGy4G017810 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy4G017810
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Pentatricopeptide repeat-containing family protein
Location	Chr4 : 22998337 .. 23000463 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCTCTGGATTAATGTTCTTCCGGTTGGTGCTAAATCGTTTCTACTGTTCTAATTTTATAATTTCACGTAATTCTCTTATTACCCGGTATTCTCGATTGGGTCAAATCGAAAAGGCTCGGGTTGTGTTCGATGAAATGCGTGACAAAAACATCATTTCATGGAACTCAATTGTTGCTGGGTACTTTCAGAACAAACGGCCTCAGGAAGCCCAGAACATGTTTGATAAAATGTCTGAGAGGAATACTATATCTTGGAATGGTTTAGTTTCTGGGTATATTAACAATGGGATGATCAATGAAGCTAGGGAAGTGTTTGATAGAATGCCTGAGAGGAATGTTGTTTCCTGGACTGCAATGGTCAGAGGGTACGTGAAGGAAGGTATGATTTCTGAGGCAGAGACACTTTTTTGGCAAATGCCTGAAAAGAATGTAGTATCTTGGACGGTGATGTTGGGTGGCCTTCTTCAAGAAGGACGGATTGATGAGGCTTGTAGGCTTTTCGATATGATGCCTGAGAAGGATGTGGTGACACGAACTAATATGATTGGAGGGTATTGCCAAGTAGGCCGTTTAGTGGAAGCTCGTATGCTTTTCGATGAGATGCCTCGTCGGAATGTCGTGTCATGGACTACGATGATAACAGGATATGTGCAGAACCAACAAGTGGATATTGCTAGAAAGCTGTTTGAAGTCATGCCAGAGAAAAATGAGGTTTCATGGACTGCTATGCTGAAAGGCTACACCAATTGTGGGCGGCTTGATGAGGCTTCAGAACTTTTTAATGCAATGCCAATTAAGTCGGTTGTTGCTTGTAATGCAATGATTCTTTGTTTTGGCCAGAATGGGGAGGTCCCAAAAGCAAGACAAGTGTTTGATCAAATGAGAGAAAAGGATGAAGGAACATGGAGTGCTATGATTAAAGTGTATGAACGGAAAGGCCTTGAGTTAGATGCACTTGAGTTGTTTCGTATGATGCAAAGAGAAGGAATAAGGCCAAATTTTCCTTCTTTGATCAGCGTTCTTTCCGTTTGTGCTGGCTTGGCTAATCTTGATCATGGTAGAGAGATACATGCCCAGCTTGTGAGATCCCAATTTGACCTTGATGTCTATGTTGCCTCCGTTCTTCTCTCAATGTACATAAAGTGTGGCAATCTGGCGAAAGCAAAACAAGTATTTGATAGGTTTGCAGTTAAGGATGTTGTCATGTGGAACTCGATTATCACAGGATATGCCCAACATGGTCTAGGGGTGGAAGCATTACGAGTTTTCCACGATATGCATTTTTCAGGTATCATGCCAGATGATGTCACATTTGTTGGAGTTCTTTCGGCATGTAGTTACACTGGCAATGTGAAAAAAGGCTTAGAAATTTTCAATTCCATGGAAACGAAGTATCAAGTGGAACAAAAAATTGAACATTATGCCTGCATGGTTGATTTGCTTGGTCGAGCTGGTAAACTAAATGAGGCAATGGATCTAATAGAAAAAATGCCAATGGAAGCCGATGCTATTATTTGGGGTGCTTTATTAGGTGCTTGCAGAACCCACATGAAATTGGATTTGGCTGAAGTTGCAGCCAAAAAGCTTCTAGTGCTTGAGCCTAAAAATGCAGGGCCTTTCATTTTGTTGTCAAATATCTATGCATCTCAAGGTAGATGGGATGATGTTGCTGAGTTGAGGAGAAATATGAGAGATAGGCGTGTGAGCAAGTACCCAGGCTGTAGCTGGATTGTTGTCGAGAAGAAAGTTCATAAGTTCACGGGAGGTGATAGCTCGGGACACCCTGAGCATTCTGAGATCAATAGAATATTAGAGTGGTTGTCTGGATTGCTAAGAGAGGCAGGATATTACCCAGATCAAAGTTTTGTGCTACATGACGTAGATGAAGAAGAGAAAGTGCAAAGCTTGGAGTACCATAGTGAGAAACTGGCTGTGGCATACGGACTTCTCAAAATACCAATAGGTATGCCGATTCGTGTAATGAAGAATCTCCGTGTCTGTGGGGATTGCCACGCTGCAATTAAACTAATTGCGAAGGTTACAGGAAGAGAGATCATCTTGAGAGATGCTAATCGGTTCCATCATTTTAAGGATGGCTCATGCTCTTGTCGGGATTATTGGTGA

mRNA sequence

ATGTTCTCTGGATTAATGTTCTTCCGGTTGGTGCTAAATCGTTTCTACTGTTCTAATTTTATAATTTCACGTAATTCTCTTATTACCCGGTATTCTCGATTGGGTCAAATCGAAAAGGCTCGGGTTGTGTTCGATGAAATGCGTGACAAAAACATCATTTCATGGAACTCAATTGTTGCTGGGTACTTTCAGAACAAACGGCCTCAGGAAGCCCAGAACATGTTTGATAAAATGTCTGAGAGGAATACTATATCTTGGAATGGTTTAGTTTCTGGGTATATTAACAATGGGATGATCAATGAAGCTAGGGAAGTGTTTGATAGAATGCCTGAGAGGAATGTTGTTTCCTGGACTGCAATGGTCAGAGGGTACGTGAAGGAAGGTATGATTTCTGAGGCAGAGACACTTTTTTGGCAAATGCCTGAAAAGAATGTAGTATCTTGGACGGTGATGTTGGGTGGCCTTCTTCAAGAAGGACGGATTGATGAGGCTTGTAGGCTTTTCGATATGATGCCTGAGAAGGATGTGGTGACACGAACTAATATGATTGGAGGGTATTGCCAAGTAGGCCGTTTAGTGGAAGCTCGTATGCTTTTCGATGAGATGCCTCGTCGGAATGTCGTGTCATGGACTACGATGATAACAGGATATGTGCAGAACCAACAAGTGGATATTGCTAGAAAGCTGTTTGAAGTCATGCCAGAGAAAAATGAGGTTTCATGGACTGCTATGCTGAAAGGCTACACCAATTGTGGGCGGCTTGATGAGGCTTCAGAACTTTTTAATGCAATGCCAATTAAGTCGGTTGTTGCTTGTAATGCAATGATTCTTTGTTTTGGCCAGAATGGGGAGGTCCCAAAAGCAAGACAAGTGTTTGATCAAATGAGAGAAAAGGATGAAGGAACATGGAGTGCTATGATTAAAGTGTATGAACGGAAAGGCCTTGAGTTAGATGCACTTGAGTTGTTTCGTATGATGCAAAGAGAAGGAATAAGGCCAAATTTTCCTTCTTTGATCAGCGTTCTTTCCGTTTGTGCTGGCTTGGCTAATCTTGATCATGGTAGAGAGATACATGCCCAGCTTGTGAGATCCCAATTTGACCTTGATGTCTATGTTGCCTCCGTTCTTCTCTCAATGTACATAAAGTGTGGCAATCTGGCGAAAGCAAAACAAGTATTTGATAGGTTTGCAGTTAAGGATGTTGTCATGTGGAACTCGATTATCACAGGATATGCCCAACATGGTCTAGGGGTGGAAGCATTACGAGTTTTCCACGATATGCATTTTTCAGGTATCATGCCAGATGATGTCACATTTGTTGGAGTTCTTTCGGCATGTAGTTACACTGGCAATGTGAAAAAAGGCTTAGAAATTTTCAATTCCATGGAAACGAAGTATCAAGTGGAACAAAAAATTGAACATTATGCCTGCATGGTTGATTTGCTTGGTCGAGCTGGTAAACTAAATGAGGCAATGGATCTAATAGAAAAAATGCCAATGGAAGCCGATGCTATTATTTGGGGTGCTTTATTAGGTGCTTGCAGAACCCACATGAAATTGGATTTGGCTGAAGTTGCAGCCAAAAAGCTTCTAGTGCTTGAGCCTAAAAATGCAGGGCCTTTCATTTTGTTGTCAAATATCTATGCATCTCAAGGTAGATGGGATGATGTTGCTGAGTTGAGGAGAAATATGAGAGATAGGCGTGTGAGCAAGTACCCAGGCTGTAGCTGGATTGTTGTCGAGAAGAAAGTTCATAAGTTCACGGGAGGTGATAGCTCGGGACACCCTGAGCATTCTGAGATCAATAGAATATTAGAGTGGTTGTCTGGATTGCTAAGAGAGGCAGGATATTACCCAGATCAAAGTTTTGTGCTACATGACGTAGATGAAGAAGAGAAAGTGCAAAGCTTGGAGTACCATAGTGAGAAACTGGCTGTGGCATACGGACTTCTCAAAATACCAATAGGTATGCCGATTCGTGTAATGAAGAATCTCCGTGTCTGTGGGGATTGCCACGCTGCAATTAAACTAATTGCGAAGGTTACAGGAAGAGAGATCATCTTGAGAGATGCTAATCGGTTCCATCATTTTAAGGATGGCTCATGCTCTTGTCGGGATTATTGGTGA

Coding sequence (CDS)

ATGTTCTCTGGATTAATGTTCTTCCGGTTGGTGCTAAATCGTTTCTACTGTTCTAATTTTATAATTTCACGTAATTCTCTTATTACCCGGTATTCTCGATTGGGTCAAATCGAAAAGGCTCGGGTTGTGTTCGATGAAATGCGTGACAAAAACATCATTTCATGGAACTCAATTGTTGCTGGGTACTTTCAGAACAAACGGCCTCAGGAAGCCCAGAACATGTTTGATAAAATGTCTGAGAGGAATACTATATCTTGGAATGGTTTAGTTTCTGGGTATATTAACAATGGGATGATCAATGAAGCTAGGGAAGTGTTTGATAGAATGCCTGAGAGGAATGTTGTTTCCTGGACTGCAATGGTCAGAGGGTACGTGAAGGAAGGTATGATTTCTGAGGCAGAGACACTTTTTTGGCAAATGCCTGAAAAGAATGTAGTATCTTGGACGGTGATGTTGGGTGGCCTTCTTCAAGAAGGACGGATTGATGAGGCTTGTAGGCTTTTCGATATGATGCCTGAGAAGGATGTGGTGACACGAACTAATATGATTGGAGGGTATTGCCAAGTAGGCCGTTTAGTGGAAGCTCGTATGCTTTTCGATGAGATGCCTCGTCGGAATGTCGTGTCATGGACTACGATGATAACAGGATATGTGCAGAACCAACAAGTGGATATTGCTAGAAAGCTGTTTGAAGTCATGCCAGAGAAAAATGAGGTTTCATGGACTGCTATGCTGAAAGGCTACACCAATTGTGGGCGGCTTGATGAGGCTTCAGAACTTTTTAATGCAATGCCAATTAAGTCGGTTGTTGCTTGTAATGCAATGATTCTTTGTTTTGGCCAGAATGGGGAGGTCCCAAAAGCAAGACAAGTGTTTGATCAAATGAGAGAAAAGGATGAAGGAACATGGAGTGCTATGATTAAAGTGTATGAACGGAAAGGCCTTGAGTTAGATGCACTTGAGTTGTTTCGTATGATGCAAAGAGAAGGAATAAGGCCAAATTTTCCTTCTTTGATCAGCGTTCTTTCCGTTTGTGCTGGCTTGGCTAATCTTGATCATGGTAGAGAGATACATGCCCAGCTTGTGAGATCCCAATTTGACCTTGATGTCTATGTTGCCTCCGTTCTTCTCTCAATGTACATAAAGTGTGGCAATCTGGCGAAAGCAAAACAAGTATTTGATAGGTTTGCAGTTAAGGATGTTGTCATGTGGAACTCGATTATCACAGGATATGCCCAACATGGTCTAGGGGTGGAAGCATTACGAGTTTTCCACGATATGCATTTTTCAGGTATCATGCCAGATGATGTCACATTTGTTGGAGTTCTTTCGGCATGTAGTTACACTGGCAATGTGAAAAAAGGCTTAGAAATTTTCAATTCCATGGAAACGAAGTATCAAGTGGAACAAAAAATTGAACATTATGCCTGCATGGTTGATTTGCTTGGTCGAGCTGGTAAACTAAATGAGGCAATGGATCTAATAGAAAAAATGCCAATGGAAGCCGATGCTATTATTTGGGGTGCTTTATTAGGTGCTTGCAGAACCCACATGAAATTGGATTTGGCTGAAGTTGCAGCCAAAAAGCTTCTAGTGCTTGAGCCTAAAAATGCAGGGCCTTTCATTTTGTTGTCAAATATCTATGCATCTCAAGGTAGATGGGATGATGTTGCTGAGTTGAGGAGAAATATGAGAGATAGGCGTGTGAGCAAGTACCCAGGCTGTAGCTGGATTGTTGTCGAGAAGAAAGTTCATAAGTTCACGGGAGGTGATAGCTCGGGACACCCTGAGCATTCTGAGATCAATAGAATATTAGAGTGGTTGTCTGGATTGCTAAGAGAGGCAGGATATTACCCAGATCAAAGTTTTGTGCTACATGACGTAGATGAAGAAGAGAAAGTGCAAAGCTTGGAGTACCATAGTGAGAAACTGGCTGTGGCATACGGACTTCTCAAAATACCAATAGGTATGCCGATTCGTGTAATGAAGAATCTCCGTGTCTGTGGGGATTGCCACGCTGCAATTAAACTAATTGCGAAGGTTACAGGAAGAGAGATCATCTTGAGAGATGCTAATCGGTTCCATCATTTTAAGGATGGCTCATGCTCTTGTCGGGATTATTGGTGA

Protein sequence

MFSGLMFFRLVLNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSCRDYW

Homology

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BLAST of CsGy4G017810 vs. NCBI nr
Match: KGN54664.1 (hypothetical protein Csa_4G418570 [Cucumis sativus])

HSP 1 Score: 785.8 bits (2028), Expect = 1.2e-223
Identity = 381/381 (100.00%), Postives = 381/381 (100.00%), Query Frame = 0


Query: 328 REGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLA 387
           REGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLA
Sbjct: 394 REGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLA 453

Query: 388 KAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACS 447
           KAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACS
Sbjct: 454 KAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACS 513

Query: 448 YTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIW 507
           YTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIW
Sbjct: 514 YTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIW 573

Query: 508 GALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDR 567
           GALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDR
Sbjct: 574 GALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDR 633

Query: 568 RVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHD 627
           RVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHD
Sbjct: 634 RVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHD 693

Query: 628 VDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREII 687
           VDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREII
Sbjct: 694 VDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREII 753

Query: 688 LRDANRFHHFKDGSCSCRDYW 709
           LRDANRFHHFKDGSCSCRDYW
Sbjct: 754 LRDANRFHHFKDGSCSCRDYW 774

[Close]

BLAST of CsGy4G017810 vs. NCBI nr
Match: XP_011653842.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g56690, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 785.8 bits (2028), Expect = 1.2e-223
Identity = 381/381 (100.00%), Postives = 381/381 (100.00%), Query Frame = 0


Query: 328 REGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLA 387
           REGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLA
Sbjct: 328 REGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLA 387

Query: 388 KAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACS 447
           KAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACS
Sbjct: 388 KAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACS 447

Query: 448 YTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIW 507
           YTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIW
Sbjct: 448 YTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIW 507

Query: 508 GALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDR 567
           GALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDR
Sbjct: 508 GALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDR 567

Query: 568 RVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHD 627
           RVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHD
Sbjct: 568 RVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHD 627

Query: 628 VDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREII 687
           VDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREII
Sbjct: 628 VDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREII 687

Query: 688 LRDANRFHHFKDGSCSCRDYW 709
           LRDANRFHHFKDGSCSCRDYW
Sbjct: 688 LRDANRFHHFKDGSCSCRDYW 708

[Close]

BLAST of CsGy4G017810 vs. NCBI nr
Match: XP_008455763.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g56690, mitochondrial-like [Cucumis melo])

HSP 1 Score: 767.7 bits (1981), Expect = 3.5e-218
Identity = 372/381 (97.64%), Postives = 374/381 (98.16%), Query Frame = 0


Query: 328 REGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLA 387
           REGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLA
Sbjct: 328 REGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLA 387

Query: 388 KAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACS 447
           KAKQVFDRFAVKDVVMWNSIITGYAQHGLG EALRVFHDMHFSGIMPDD+TFVGVLSACS
Sbjct: 388 KAKQVFDRFAVKDVVMWNSIITGYAQHGLGEEALRVFHDMHFSGIMPDDITFVGVLSACS 447

Query: 448 YTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIW 507
           YTGNVKKGLEIF SMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIW
Sbjct: 448 YTGNVKKGLEIFYSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIW 507

Query: 508 GALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDR 567
           GALLGACRTHMKLDLAEVAAKKLL LEPKNAGPFILLSNIYASQGRW DVAELRRNMRDR
Sbjct: 508 GALLGACRTHMKLDLAEVAAKKLLYLEPKNAGPFILLSNIYASQGRWGDVAELRRNMRDR 567

Query: 568 RVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHD 627
            VSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHD
Sbjct: 568 HVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHD 627

Query: 628 VDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREII 687
           VDEEEKVQSLEYHSEKLAVAYGL KIP GMPIRVMKNLRVCGDCHAAIKLIAKVTGREII
Sbjct: 628 VDEEEKVQSLEYHSEKLAVAYGLFKIPKGMPIRVMKNLRVCGDCHAAIKLIAKVTGREII 687

Query: 688 LRDANRFHHFKDGSCSCRDYW 709
           LRDANRFHHFKDGSCSC+DYW
Sbjct: 688 LRDANRFHHFKDGSCSCQDYW 708

[Close]

BLAST of CsGy4G017810 vs. NCBI nr
Match: XP_022158877.1 (pentatricopeptide repeat-containing protein At1g56690, mitochondrial-like isoform X1 [Momordica charantia] >XP_022158878.1 pentatricopeptide repeat-containing protein At1g56690, mitochondrial-like isoform X1 [Momordica charantia] >XP_022158879.1 pentatricopeptide repeat-containing protein At1g56690, mitochondrial-like isoform X1 [Momordica charantia] >XP_022158880.1 pentatricopeptide repeat-containing protein At1g56690, mitochondrial-like isoform X1 [Momordica charantia] >XP_022158881.1 pentatricopeptide repeat-containing protein At1g56690, mitochondrial-like isoform X1 [Momordica charantia])

HSP 1 Score: 723.8 bits (1867), Expect = 5.7e-205
Identity = 345/381 (90.55%), Postives = 360/381 (94.49%), Query Frame = 0


Query: 328 REGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLA 387
           REGIRPNFPSLISVLSVCA LANLDHGRE+HAQLVRSQFDLDVYVASVL++MY+KCGNL 
Sbjct: 328 REGIRPNFPSLISVLSVCASLANLDHGREVHAQLVRSQFDLDVYVASVLITMYVKCGNLV 387

Query: 388 KAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACS 447
           KAKQVFDRF +KDVVMWNSIITGYAQHGLG EAL+VFHDMHFSG+MPDD+TFVGVLSACS
Sbjct: 388 KAKQVFDRFPIKDVVMWNSIITGYAQHGLGEEALQVFHDMHFSGVMPDDITFVGVLSACS 447

Query: 448 YTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIW 507
           YTGNVKKGLEIFNSME KY VE+K EHYACMVDLLGRAGKLNEAM LIEKMPMEADAIIW
Sbjct: 448 YTGNVKKGLEIFNSMEPKYHVERKTEHYACMVDLLGRAGKLNEAMGLIEKMPMEADAIIW 507

Query: 508 GALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDR 567
           GALLGACR HMKLDLAE+AAKKLL LEPKNAGP+ILLSNIYASQGRW DV ELRRNMRDR
Sbjct: 508 GALLGACRIHMKLDLAEIAAKKLLELEPKNAGPYILLSNIYASQGRWSDVVELRRNMRDR 567

Query: 568 RVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHD 627
            VSK PGCSWI VEKKVH FTGGDS GHPEHSEI RIL+WLSGLLREAGYYPD+SFVLHD
Sbjct: 568 SVSKSPGCSWIDVEKKVHMFTGGDSMGHPEHSEIMRILDWLSGLLREAGYYPDRSFVLHD 627

Query: 628 VDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREII 687
           VDEEEKVQSL YHSEKLAVAYGLLKIP GMPIRVMKNLRVCGDCH AIKLIAKV+GREII
Sbjct: 628 VDEEEKVQSLGYHSEKLAVAYGLLKIPKGMPIRVMKNLRVCGDCHTAIKLIAKVSGREII 687

Query: 688 LRDANRFHHFKDGSCSCRDYW 709
           LRDANRFHHFKDGSCSC+DYW
Sbjct: 688 LRDANRFHHFKDGSCSCKDYW 708

[Close]

BLAST of CsGy4G017810 vs. NCBI nr
Match: XP_023517429.1 (pentatricopeptide repeat-containing protein At1g56690, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 719.5 bits (1856), Expect = 1.1e-203
Identity = 343/380 (90.26%), Postives = 360/380 (94.74%), Query Frame = 0


Query: 329 EGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAK 388
           EGIRPNFPSLISVLSVCA LA LDHGREIHAQLVRSQFDLDVYVASVLL+MY+KCGNL K
Sbjct: 329 EGIRPNFPSLISVLSVCASLATLDHGREIHAQLVRSQFDLDVYVASVLLTMYVKCGNLVK 388

Query: 389 AKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSY 448
           AKQ+FD+FA KDVVMWNSIITGYAQHGLG EAL+VFHDMHFS ++PDD+TF+GVLSACSY
Sbjct: 389 AKQIFDKFATKDVVMWNSIITGYAQHGLGEEALQVFHDMHFSRVVPDDITFIGVLSACSY 448

Query: 449 TGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWG 508
           TGNVKKGLEIFNSME KYQVEQKIEHYACMVDLLGRAGKLNEAMDLIE MPMEADAIIWG
Sbjct: 449 TGNVKKGLEIFNSMEMKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIENMPMEADAIIWG 508

Query: 509 ALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRR 568
           +LLGACRTHM+LDLAEVAAKKLL LEPKNAGP+ILLSNIYASQGRW+DVAELRR MRDR 
Sbjct: 509 SLLGACRTHMRLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRWNDVAELRRTMRDRS 568

Query: 569 VSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHDV 628
           VSK PGCSWI V+KKVH FTGG+SSGHPEHSEI R LEWLSGLLRE GYYPD+SFVLHDV
Sbjct: 569 VSKSPGCSWIDVDKKVHMFTGGESSGHPEHSEIMRTLEWLSGLLREEGYYPDRSFVLHDV 628

Query: 629 DEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREIIL 688
           DEEEKVQSL YHSEKLAVAYGLLK+P GMPIRVMKNLRVCGDCH AIKLIAKVTGREIIL
Sbjct: 629 DEEEKVQSLGYHSEKLAVAYGLLKLPKGMPIRVMKNLRVCGDCHTAIKLIAKVTGREIIL 688

Query: 689 RDANRFHHFKDGSCSCRDYW 709
           RDANRFHHFKDGSCSCRDYW
Sbjct: 689 RDANRFHHFKDGSCSCRDYW 708

[Close]

BLAST of CsGy4G017810 vs. TAIR10
Match: AT1G56690.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 553.5 bits (1425), Expect = 1.9e-157
Identity = 258/381 (67.72%), Postives = 314/381 (82.41%), Query Frame = 0


Query: 328 REGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLA 387
           ++G+RP+FPSLIS+LSVCA LA+L +GR++HA LVR QFD DVYVASVL++MY+KCG L 
Sbjct: 324 KQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELV 383

Query: 388 KAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACS 447
           KAK VFDRF+ KD++MWNSII+GYA HGLG EAL++FH+M  SG MP+ VT + +L+ACS
Sbjct: 384 KAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACS 443

Query: 448 YTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIW 507
           Y G +++GLEIF SME+K+ V   +EHY+C VD+LGRAG++++AM+LIE M ++ DA +W
Sbjct: 444 YAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVW 503

Query: 508 GALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDR 567
           GALLGAC+TH +LDLAEVAAKKL   EP NAG ++LLS+I AS+ +W DVA +R+NMR  
Sbjct: 504 GALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTN 563

Query: 568 RVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHD 627
            VSK+PGCSWI V KKVH FT G    HPE + I  +LE   GLLREAGY PD S VLHD
Sbjct: 564 NVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHD 623

Query: 628 VDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREII 687
           VDEEEKV SL  HSE+LAVAYGLLK+P G+PIRVMKNLRVCGDCHAAIKLI+KVT REII
Sbjct: 624 VDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREII 683

Query: 688 LRDANRFHHFKDGSCSCRDYW 709
           LRDANRFHHF +G CSCRDYW
Sbjct: 684 LRDANRFHHFNNGECSCRDYW 704

[Close]

BLAST of CsGy4G017810 vs. TAIR10
Match: AT1G09410.1 (pentatricopeptide (PPR) repeat-containing protein)

HSP 1 Score: 453.4 bits (1165), Expect = 2.6e-127
Identity = 220/382 (57.59%), Postives = 267/382 (69.90%), Query Frame = 0


Query: 328 REGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLA 387
           ++G+RP FP+LIS+LSVCA LA+L HG+++HAQLVR QFD+DVYVASVL++MYIKCG L 
Sbjct: 324 KQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELV 383

Query: 388 KAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSG-IMPDDVTFVGVLSAC 447
           K+K +FDRF  KD++MWNSII+GYA HGLG EAL+VF +M  SG   P++VTFV      
Sbjct: 384 KSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATXXXX 443

Query: 448 SYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAII 507
                                                                +E DA +
Sbjct: 444 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVEPDAAV 503

Query: 508 WGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRD 567
           WG+LLGACRTH +LD+AE  AKKL+ +EP+N+G +ILLSN+YASQGRW DVAELR+ M+ 
Sbjct: 504 WGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKT 563

Query: 568 RRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLH 627
           R V K PGCSW  VE KVH FT G  + HPE   I +IL+ L GLLREAGY PD S+ LH
Sbjct: 564 RLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALH 623

Query: 628 DVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREI 687
           DVDEEEKV SL+YHSE+LAVAY LLK+  G+PIRVMKNLRVC DCH AIK+I+KV  REI
Sbjct: 624 DVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREI 683

Query: 688 ILRDANRFHHFKDGSCSCRDYW 709
           ILRDANRFHHF++G CSC+DYW
Sbjct: 684 ILRDANRFHHFRNGECSCKDYW 705

[Close]

BLAST of CsGy4G017810 vs. TAIR10
Match: AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 429.1 bits (1102), Expect = 5.3e-120
Identity = 205/380 (53.95%), Postives = 262/380 (68.95%), Query Frame = 0


Query: 329 EGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAK 388
           EG R N  S  S LS CA +  L+ G+++H +LV+  ++   +V + LL MY KCG++ +
Sbjct: 403 EGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEE 462

Query: 389 AKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSY 448
           A  +F   A KD+V WN++I GY++HG G  ALR F  M   G+ PDD T V VLSACS+
Sbjct: 463 ANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSH 522

Query: 449 TGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWG 508
           TG V KG + F +M   Y V    +HYACMVDLLGRAG L +A +L++ MP E DA IWG
Sbjct: 523 TGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWG 582

Query: 509 ALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRR 568
            LLGA R H   +LAE AA K+  +EP+N+G ++LLSN+YAS GRW DV +LR  MRD+ 
Sbjct: 583 TLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKG 642

Query: 569 VSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHDV 628
           V K PG SWI ++ K H F+ GD   HPE  EI   LE L   +++AGY    S VLHDV
Sbjct: 643 VKKVPGYSWIEIQNKTHTFSVGDEF-HPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDV 702

Query: 629 DEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREIIL 688
           +EEEK + + YHSE+LAVAYG++++  G PIRV+KNLRVC DCH AIK +A++TGR IIL
Sbjct: 703 EEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIIL 762

Query: 689 RDANRFHHFKDGSCSCRDYW 709
           RD NRFHHFKDGSCSC DYW
Sbjct: 763 RDNNRFHHFKDGSCSCGDYW 781

[Close]

BLAST of CsGy4G017810 vs. TAIR10
Match: AT2G22070.1 (pentatricopeptide (PPR) repeat-containing protein)

HSP 1 Score: 400.2 bits (1027), Expect = 2.6e-111
Identity = 187/380 (49.21%), Postives = 261/380 (68.68%), Query Frame = 0


Query: 330 GIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKA 389
           G RPN  +L ++LSV + LA+L HG++IH   V+S     V V++ L++MY K GN+  A
Sbjct: 408 GQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSA 467

Query: 390 KQVFDRF-AVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSY 449
            + FD     +D V W S+I   AQHG   EAL +F  M   G+ PD +T+VGV SAC++
Sbjct: 468 SRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTH 527

Query: 450 TGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWG 509
            G V +G + F+ M+   ++   + HYACMVDL GRAG L EA + IEKMP+E D + WG
Sbjct: 528 AGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWG 587

Query: 510 ALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRR 569
           +LL ACR H  +DL +VAA++LL+LEP+N+G +  L+N+Y++ G+W++ A++R++M+D R
Sbjct: 588 SLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGR 647

Query: 570 VSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHDV 629
           V K  G SWI V+ KVH F G +   HPE +EI   ++ +   +++ GY PD + VLHD+
Sbjct: 648 VKKEQGFSWIEVKHKVHVF-GVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDL 707

Query: 630 DEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREIIL 689
           +EE K Q L +HSEKLA+A+GL+  P    +R+MKNLRVC DCH AIK I+K+ GREII+
Sbjct: 708 EEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIV 767

Query: 690 RDANRFHHFKDGSCSCRDYW 709
           RD  RFHHFKDG CSCRDYW
Sbjct: 768 RDTTRFHHFKDGFCSCRDYW 786

[Close]

BLAST of CsGy4G017810 vs. TAIR10
Match: AT4G16835.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 388.3 bits (996), Expect = 1.0e-107
Identity = 192/380 (50.53%), Postives = 248/380 (65.26%), Query Frame = 0


Query: 329 EGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAK 388
           EGIRPN   L S L  C+ L+ L  GR+IH  + +S    DV   + L+SMY KCG L  
Sbjct: 278 EGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGD 337

Query: 389 AKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSY 448
           A ++F+    KDVV WN++I+GYAQHG   +AL +F +M  + I PD +TFV VL AC++
Sbjct: 338 AWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNH 397

Query: 449 TGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWG 508
            G V  G+  F SM   Y+VE + +HY CMVDLLGRAGKL EA+ LI  MP    A ++G
Sbjct: 398 AGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFG 457

Query: 509 ALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRR 568
            LLGACR H  ++LAE AA+KLL L  +NA  ++ L+NIYAS+ RW+DVA +R+ M++  
Sbjct: 458 TLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESN 517

Query: 569 VSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHDV 628
           V K PG SWI +  KVH F   D   HPE                  GY P+  F LH+V
Sbjct: 518 VVKVPGYSWIEIRNKVHHFRSSDRI-HPELXXXXXXXXXXXXXXXXXGYKPELEFALHNV 577

Query: 629 DEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREIIL 688
           +EE+K + L +HSEKLAVA+G +K+P G  I+V KNLR+CGDCH AIK I+++  REII+
Sbjct: 578 EEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIV 637

Query: 689 RDANRFHHFKDGSCSCRDYW 709
           RD  RFHHFKDGSCSC DYW
Sbjct: 638 RDTTRFHHFKDGSCSCGDYW 656

[Close]

BLAST of CsGy4G017810 vs. Swiss-Prot
Match: sp|Q9FXB9|PPR84_ARATH (Pentatricopeptide repeat-containing protein At1g56690, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H69 PE=2 SV=1)

HSP 1 Score: 553.5 bits (1425), Expect = 3.4e-156
Identity = 258/381 (67.72%), Postives = 314/381 (82.41%), Query Frame = 0


Query: 328 REGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLA 387
           ++G+RP+FPSLIS+LSVCA LA+L +GR++HA LVR QFD DVYVASVL++MY+KCG L 
Sbjct: 324 KQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELV 383

Query: 388 KAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACS 447
           KAK VFDRF+ KD++MWNSII+GYA HGLG EAL++FH+M  SG MP+ VT + +L+ACS
Sbjct: 384 KAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACS 443

Query: 448 YTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIW 507
           Y G +++GLEIF SME+K+ V   +EHY+C VD+LGRAG++++AM+LIE M ++ DA +W
Sbjct: 444 YAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVW 503

Query: 508 GALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDR 567
           GALLGAC+TH +LDLAEVAAKKL   EP NAG ++LLS+I AS+ +W DVA +R+NMR  
Sbjct: 504 GALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTN 563

Query: 568 RVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHD 627
            VSK+PGCSWI V KKVH FT G    HPE + I  +LE   GLLREAGY PD S VLHD
Sbjct: 564 NVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHD 623

Query: 628 VDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREII 687
           VDEEEKV SL  HSE+LAVAYGLLK+P G+PIRVMKNLRVCGDCHAAIKLI+KVT REII
Sbjct: 624 VDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREII 683

Query: 688 LRDANRFHHFKDGSCSCRDYW 709
           LRDANRFHHF +G CSCRDYW
Sbjct: 684 LRDANRFHHFNNGECSCRDYW 704

[Close]

BLAST of CsGy4G017810 vs. Swiss-Prot
Match: sp|Q56XI1|PPR25_ARATH (Pentatricopeptide repeat-containing protein At1g09410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H18 PE=1 SV=2)

HSP 1 Score: 453.4 bits (1165), Expect = 4.7e-126
Identity = 220/382 (57.59%), Postives = 267/382 (69.90%), Query Frame = 0


Query: 328 REGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLA 387
           ++G+RP FP+LIS+LSVCA LA+L HG+++HAQLVR QFD+DVYVASVL++MYIKCG L 
Sbjct: 324 KQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELV 383

Query: 388 KAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSG-IMPDDVTFVGVLSAC 447
           K+K +FDRF  KD++MWNSII+GYA HGLG EAL+VF +M  SG   P++VTFV      
Sbjct: 384 KSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATXXXX 443

Query: 448 SYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAII 507
                                                                +E DA +
Sbjct: 444 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVEPDAAV 503

Query: 508 WGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRD 567
           WG+LLGACRTH +LD+AE  AKKL+ +EP+N+G +ILLSN+YASQGRW DVAELR+ M+ 
Sbjct: 504 WGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKT 563

Query: 568 RRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLH 627
           R V K PGCSW  VE KVH FT G  + HPE   I +IL+ L GLLREAGY PD S+ LH
Sbjct: 564 RLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALH 623

Query: 628 DVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREI 687
           DVDEEEKV SL+YHSE+LAVAY LLK+  G+PIRVMKNLRVC DCH AIK+I+KV  REI
Sbjct: 624 DVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREI 683

Query: 688 ILRDANRFHHFKDGSCSCRDYW 709
           ILRDANRFHHF++G CSC+DYW
Sbjct: 684 ILRDANRFHHFRNGECSCKDYW 705

[Close]

BLAST of CsGy4G017810 vs. Swiss-Prot
Match: sp|Q9SY02|PP301_ARATH (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 9.6e-119
Identity = 205/380 (53.95%), Postives = 262/380 (68.95%), Query Frame = 0


Query: 329 EGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAK 388
           EG R N  S  S LS CA +  L+ G+++H +LV+  ++   +V + LL MY KCG++ +
Sbjct: 403 EGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEE 462

Query: 389 AKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSY 448
           A  +F   A KD+V WN++I GY++HG G  ALR F  M   G+ PDD T V VLSACS+
Sbjct: 463 ANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSH 522

Query: 449 TGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWG 508
           TG V KG + F +M   Y V    +HYACMVDLLGRAG L +A +L++ MP E DA IWG
Sbjct: 523 TGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWG 582

Query: 509 ALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRR 568
            LLGA R H   +LAE AA K+  +EP+N+G ++LLSN+YAS GRW DV +LR  MRD+ 
Sbjct: 583 TLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKG 642

Query: 569 VSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHDV 628
           V K PG SWI ++ K H F+ GD   HPE  EI   LE L   +++AGY    S VLHDV
Sbjct: 643 VKKVPGYSWIEIQNKTHTFSVGDEF-HPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDV 702

Query: 629 DEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREIIL 688
           +EEEK + + YHSE+LAVAYG++++  G PIRV+KNLRVC DCH AIK +A++TGR IIL
Sbjct: 703 EEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIIL 762

Query: 689 RDANRFHHFKDGSCSCRDYW 709
           RD NRFHHFKDGSCSC DYW
Sbjct: 763 RDNNRFHHFKDGSCSCGDYW 781

[Close]

BLAST of CsGy4G017810 vs. Swiss-Prot
Match: sp|Q9SHZ8|PP168_ARATH (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H41 PE=3 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 4.8e-110
Identity = 187/380 (49.21%), Postives = 261/380 (68.68%), Query Frame = 0


Query: 330 GIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKA 389
           G RPN  +L ++LSV + LA+L HG++IH   V+S     V V++ L++MY K GN+  A
Sbjct: 408 GQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSA 467

Query: 390 KQVFDRF-AVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSY 449
            + FD     +D V W S+I   AQHG   EAL +F  M   G+ PD +T+VGV SAC++
Sbjct: 468 SRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTH 527

Query: 450 TGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWG 509
            G V +G + F+ M+   ++   + HYACMVDL GRAG L EA + IEKMP+E D + WG
Sbjct: 528 AGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWG 587

Query: 510 ALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRR 569
           +LL ACR H  +DL +VAA++LL+LEP+N+G +  L+N+Y++ G+W++ A++R++M+D R
Sbjct: 588 SLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGR 647

Query: 570 VSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHDV 629
           V K  G SWI V+ KVH F G +   HPE +EI   ++ +   +++ GY PD + VLHD+
Sbjct: 648 VKKEQGFSWIEVKHKVHVF-GVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDL 707

Query: 630 DEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREIIL 689
           +EE K Q L +HSEKLA+A+GL+  P    +R+MKNLRVC DCH AIK I+K+ GREII+
Sbjct: 708 EEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIV 767

Query: 690 RDANRFHHFKDGSCSCRDYW 709
           RD  RFHHFKDG CSCRDYW
Sbjct: 768 RDTTRFHHFKDGFCSCRDYW 786

[Close]

BLAST of CsGy4G017810 vs. Swiss-Prot
Match: sp|Q9M4P3|PP316_ARATH (Pentatricopeptide repeat-containing protein At4g16835, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=DYW10 PE=2 SV=3)

HSP 1 Score: 388.3 bits (996), Expect = 1.9e-106
Identity = 192/380 (50.53%), Postives = 248/380 (65.26%), Query Frame = 0


Query: 329 EGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAK 388
           EGIRPN   L S L  C+ L+ L  GR+IH  + +S    DV   + L+SMY KCG L  
Sbjct: 278 EGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGD 337

Query: 389 AKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSY 448
           A ++F+    KDVV WN++I+GYAQHG   +AL +F +M  + I PD +TFV VL AC++
Sbjct: 338 AWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNH 397

Query: 449 TGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWG 508
            G V  G+  F SM   Y+VE + +HY CMVDLLGRAGKL EA+ LI  MP    A ++G
Sbjct: 398 AGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFG 457

Query: 509 ALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRR 568
            LLGACR H  ++LAE AA+KLL L  +NA  ++ L+NIYAS+ RW+DVA +R+ M++  
Sbjct: 458 TLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESN 517

Query: 569 VSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHDV 628
           V K PG SWI +  KVH F   D   HPE                  GY P+  F LH+V
Sbjct: 518 VVKVPGYSWIEIRNKVHHFRSSDRI-HPELXXXXXXXXXXXXXXXXXGYKPELEFALHNV 577

Query: 629 DEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREIIL 688
           +EE+K + L +HSEKLAVA+G +K+P G  I+V KNLR+CGDCH AIK I+++  REII+
Sbjct: 578 EEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIV 637

Query: 689 RDANRFHHFKDGSCSCRDYW 709
           RD  RFHHFKDGSCSC DYW
Sbjct: 638 RDTTRFHHFKDGSCSCGDYW 656

[Close]

BLAST of CsGy4G017810 vs. TrEMBL
Match: tr|A0A0A0L0T3|A0A0A0L0T3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G418570 PE=4 SV=1)

HSP 1 Score: 785.8 bits (2028), Expect = 8.1e-224
Identity = 381/381 (100.00%), Postives = 381/381 (100.00%), Query Frame = 0


Query: 328 REGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLA 387
           REGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLA
Sbjct: 394 REGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLA 453

Query: 388 KAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACS 447
           KAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACS
Sbjct: 454 KAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACS 513

Query: 448 YTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIW 507
           YTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIW
Sbjct: 514 YTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIW 573

Query: 508 GALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDR 567
           GALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDR
Sbjct: 574 GALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDR 633

Query: 568 RVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHD 627
           RVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHD
Sbjct: 634 RVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHD 693

Query: 628 VDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREII 687
           VDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREII
Sbjct: 694 VDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREII 753

Query: 688 LRDANRFHHFKDGSCSCRDYW 709
           LRDANRFHHFKDGSCSCRDYW
Sbjct: 754 LRDANRFHHFKDGSCSCRDYW 774

[Close]

BLAST of CsGy4G017810 vs. TrEMBL
Match: tr|A0A1S3C183|A0A1S3C183_CUCME (pentatricopeptide repeat-containing protein At1g56690, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103495864 PE=4 SV=1)

HSP 1 Score: 767.7 bits (1981), Expect = 2.3e-218
Identity = 372/381 (97.64%), Postives = 374/381 (98.16%), Query Frame = 0


Query: 328 REGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLA 387
           REGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLA
Sbjct: 328 REGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLA 387

Query: 388 KAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACS 447
           KAKQVFDRFAVKDVVMWNSIITGYAQHGLG EALRVFHDMHFSGIMPDD+TFVGVLSACS
Sbjct: 388 KAKQVFDRFAVKDVVMWNSIITGYAQHGLGEEALRVFHDMHFSGIMPDDITFVGVLSACS 447

Query: 448 YTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIW 507
           YTGNVKKGLEIF SMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIW
Sbjct: 448 YTGNVKKGLEIFYSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIW 507

Query: 508 GALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDR 567
           GALLGACRTHMKLDLAEVAAKKLL LEPKNAGPFILLSNIYASQGRW DVAELRRNMRDR
Sbjct: 508 GALLGACRTHMKLDLAEVAAKKLLYLEPKNAGPFILLSNIYASQGRWGDVAELRRNMRDR 567

Query: 568 RVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHD 627
            VSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHD
Sbjct: 568 HVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHD 627

Query: 628 VDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREII 687
           VDEEEKVQSLEYHSEKLAVAYGL KIP GMPIRVMKNLRVCGDCHAAIKLIAKVTGREII
Sbjct: 628 VDEEEKVQSLEYHSEKLAVAYGLFKIPKGMPIRVMKNLRVCGDCHAAIKLIAKVTGREII 687

Query: 688 LRDANRFHHFKDGSCSCRDYW 709
           LRDANRFHHFKDGSCSC+DYW
Sbjct: 688 LRDANRFHHFKDGSCSCQDYW 708

[Close]

BLAST of CsGy4G017810 vs. TrEMBL
Match: tr|A0A2I4EAU2|A0A2I4EAU2_9ROSI (pentatricopeptide repeat-containing protein At1g56690, mitochondrial OS=Juglans regia OX=51240 GN=LOC108987906 PE=4 SV=1)

HSP 1 Score: 639.8 bits (1649), Expect = 7.2e-180
Identity = 303/381 (79.53%), Postives = 340/381 (89.24%), Query Frame = 0


Query: 328 REGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLA 387
           REGI PNFPSLISVL VC+ LA+LDHG+++HA+LVRS +D DVYV+SVL++MY+KCG+L 
Sbjct: 323 REGISPNFPSLISVLCVCSSLASLDHGKQVHARLVRSHYDRDVYVSSVLITMYVKCGDLV 382

Query: 388 KAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACS 447
           KAK VFDRFA KD+VMWNSIITGYAQHGLG EAL+VFH+M    I+PDDVTF+GVLSACS
Sbjct: 383 KAKLVFDRFAPKDIVMWNSIITGYAQHGLGEEALQVFHEMCSLNILPDDVTFIGVLSACS 442

Query: 448 YTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIW 507
           YTG V +G EIF SM +KYQVE   EHYACMVDLLGRAG++NEAM+LIE MP+EADAI+W
Sbjct: 443 YTGKVHEGHEIFESMNSKYQVEPTTEHYACMVDLLGRAGQVNEAMNLIENMPVEADAIVW 502

Query: 508 GALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDR 567
           GALLGACRTHMKLDLAEVAAKKL+ LEPKN+GP+ILLSNIYAS+G+W DVA+LR+ MR R
Sbjct: 503 GALLGACRTHMKLDLAEVAAKKLVQLEPKNSGPYILLSNIYASKGKWHDVADLRKKMRAR 562

Query: 568 RVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHD 627
           RVSK PGCSWI VEKKVH FTGGDS GHPE   I R+LE LSG+LREAGY PD +FVLHD
Sbjct: 563 RVSKSPGCSWIEVEKKVHMFTGGDSMGHPEQEIIMRMLERLSGMLREAGYCPDGTFVLHD 622

Query: 628 VDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREII 687
           VDEEEKVQSL YHSEKLAV YGLLK+P GMPIRVMKNLRVCGDCH+AIKLIAK+TGREII
Sbjct: 623 VDEEEKVQSLGYHSEKLAVVYGLLKLPEGMPIRVMKNLRVCGDCHSAIKLIAKITGREII 682

Query: 688 LRDANRFHHFKDGSCSCRDYW 709
           LRDANRFHHFKDG CSCRDYW
Sbjct: 683 LRDANRFHHFKDGLCSCRDYW 703

[Close]

BLAST of CsGy4G017810 vs. TrEMBL
Match: tr|A0A2P5D016|A0A2P5D016_9ROSA (DYW domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_267430 PE=4 SV=1)

HSP 1 Score: 639.8 bits (1649), Expect = 7.2e-180
Identity = 307/381 (80.58%), Postives = 335/381 (87.93%), Query Frame = 0


Query: 328 REGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLA 387
           R  +RPNFPSLISVLSVCA LA+LDHGRE+H QLVRSQFD DVYV+SVL++MY+KCGNL 
Sbjct: 323 RHRVRPNFPSLISVLSVCASLASLDHGREVHGQLVRSQFDHDVYVSSVLITMYVKCGNLV 382

Query: 388 KAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACS 447
           KAK VFD FA KDVVMWNSIITGYAQHGLG EAL++FH+M   G+ PDD+TF+G+LSACS
Sbjct: 383 KAKLVFDSFAAKDVVMWNSIITGYAQHGLGEEALQIFHEMCSLGLAPDDITFIGLLSACS 442

Query: 448 YTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIW 507
           YTG V +GLEIF SM+ KY VE + EHYACMVDLLGRAGK+NEAM+LIEKMPMEADAI+W
Sbjct: 443 YTGKVVEGLEIFESMKCKYLVEPRTEHYACMVDLLGRAGKVNEAMNLIEKMPMEADAIVW 502

Query: 508 GALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDR 567
           G+LLGACRTHMKLDLAEVAAKKLL L+P+NAGP ILLSNIYAS+ RW DV ELR NMR R
Sbjct: 503 GSLLGACRTHMKLDLAEVAAKKLLQLDPRNAGPCILLSNIYASKSRWRDVEELRENMRAR 562

Query: 568 RVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHD 627
            VSK PGCSWI VEKKVH FTGGDS GHPEH  I R+LE L GLLREAGY PD +FVLHD
Sbjct: 563 SVSKSPGCSWIEVEKKVHMFTGGDSMGHPEHPMILRMLERLGGLLREAGYCPDGTFVLHD 622

Query: 628 VDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREII 687
           VDEEEKV SL YHSEKLAVAYGLLK+P  MPIRVMKNLRVCGDCH+AIKLIAKVT REII
Sbjct: 623 VDEEEKVHSLRYHSEKLAVAYGLLKLPEPMPIRVMKNLRVCGDCHSAIKLIAKVTRREII 682

Query: 688 LRDANRFHHFKDGSCSCRDYW 709
           LRDANRFHHFKDG CSCRDYW
Sbjct: 683 LRDANRFHHFKDGLCSCRDYW 703

[Close]

BLAST of CsGy4G017810 vs. TrEMBL
Match: tr|A0A1Q3BZV9|A0A1Q3BZV9_CEPFO (PPR domain-containing protein/PPR_2 domain-containing protein/DYW_deaminase domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_16864 PE=4 SV=1)

HSP 1 Score: 639.4 bits (1648), Expect = 9.4e-180
Identity = 301/381 (79.00%), Postives = 341/381 (89.50%), Query Frame = 0


Query: 328 REGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLA 387
           R+ +RPNFP +ISVLSVC+ LA+LDHGR++HAQLVR QFD+DVYV+SVL++MYIKCG+LA
Sbjct: 323 RQRVRPNFPCMISVLSVCSSLASLDHGRQVHAQLVRFQFDVDVYVSSVLITMYIKCGDLA 382

Query: 388 KAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACS 447
           KAKQVF+R  +KDVV+WNSIITGYAQHGL  E L+VFH+M FSGIMPD VTFVGVL+ACS
Sbjct: 383 KAKQVFNRVPLKDVVIWNSIITGYAQHGLAEEVLQVFHEMSFSGIMPDKVTFVGVLTACS 442

Query: 448 YTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIW 507
           YTG +K+G +IF SM++KY VE   EHYACMVDLLGRAG++NEAM LIE M +EADAI+W
Sbjct: 443 YTGKIKEGRQIFESMKSKYLVEPGAEHYACMVDLLGRAGQVNEAMSLIETMLVEADAIVW 502

Query: 508 GALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDR 567
           GALLGACR HMK+DLAEVAAKKLL +EPKNAGP+ILLSN+YASQGRWDDVAELR+ M +R
Sbjct: 503 GALLGACRIHMKMDLAEVAAKKLLQIEPKNAGPYILLSNLYASQGRWDDVAELRKTMSER 562

Query: 568 RVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHD 627
            VSK PGCSW+ V KKVH FTGGDS+GHPEH  I R+LE + GLLREAGY+PD SFVLHD
Sbjct: 563 AVSKSPGCSWLEVGKKVHMFTGGDSAGHPEHERIIRMLEKIVGLLREAGYFPDGSFVLHD 622

Query: 628 VDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREII 687
           VDEEEKVQSL YHSEKLAVAYGLLK+P G PIRVMKNLRVCGDCH+AIKLIAKVTGREII
Sbjct: 623 VDEEEKVQSLRYHSEKLAVAYGLLKVPDGTPIRVMKNLRVCGDCHSAIKLIAKVTGREII 682

Query: 688 LRDANRFHHFKDGSCSCRDYW 709
           LRDANRFHHFKDG CSCRDYW
Sbjct: 683 LRDANRFHHFKDGLCSCRDYW 703

The following BLAST results are available for this feature:

BLAST of CsGy4G017810 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN54664.1	1.2e-223	100.00	hypothetical protein Csa_4G418570 [Cucumis sativus]	[more]
XP_011653842.1	1.2e-223	100.00	PREDICTED: pentatricopeptide repeat-containing protein At1g56690, mitochondrial-...	[more]
XP_008455763.1	3.5e-218	97.64	PREDICTED: pentatricopeptide repeat-containing protein At1g56690, mitochondrial-...	[more]
XP_022158877.1	5.7e-205	90.55	pentatricopeptide repeat-containing protein At1g56690, mitochondrial-like isofor...	[more]
XP_023517429.1	1.1e-203	90.26	pentatricopeptide repeat-containing protein At1g56690, mitochondrial-like [Cucur...	[more]

BLAST of CsGy4G017810 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G56690.1	1.9e-157	67.72	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G09410.1	2.6e-127	57.59	pentatricopeptide (PPR) repeat-containing protein	[more]
AT4G02750.1	5.3e-120	53.95	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G22070.1	2.6e-111	49.21	pentatricopeptide (PPR) repeat-containing protein	[more]
AT4G16835.1	1.0e-107	50.53	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of CsGy4G017810 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FXB9\|PPR84_ARATH	3.4e-156	67.72	Pentatricopeptide repeat-containing protein At1g56690, mitochondrial OS=Arabidop...	[more]
sp\|Q56XI1\|PPR25_ARATH	4.7e-126	57.59	Pentatricopeptide repeat-containing protein At1g09410, mitochondrial OS=Arabidop...	[more]
sp\|Q9SY02\|PP301_ARATH	9.6e-119	53.95	Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9SHZ8\|PP168_ARATH	4.8e-110	49.21	Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9M4P3\|PP316_ARATH	1.9e-106	50.53	Pentatricopeptide repeat-containing protein At4g16835, mitochondrial OS=Arabidop...	[more]

BLAST of CsGy4G017810 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L0T3\|A0A0A0L0T3_CUCSA	8.1e-224	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G418570 PE=4 SV=1	[more]
tr\|A0A1S3C183\|A0A1S3C183_CUCME	2.3e-218	97.64	pentatricopeptide repeat-containing protein At1g56690, mitochondrial-like OS=Cuc...	[more]
tr\|A0A2I4EAU2\|A0A2I4EAU2_9ROSI	7.2e-180	79.53	pentatricopeptide repeat-containing protein At1g56690, mitochondrial OS=Juglans ...	[more]
tr\|A0A2P5D016\|A0A2P5D016_9ROSA	7.2e-180	80.58	DYW domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_267430 ...	[more]
tr\|A0A1Q3BZV9\|A0A1Q3BZV9_CEPFO	9.4e-180	79.00	PPR domain-containing protein/PPR_2 domain-containing protein/DYW_deaminase doma...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR032867	DYW_dom
IPR002885	Pentatricopeptide_repeat
IPR011990	TPR-like_helical_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G017810.1	CsGy4G017810.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 335..444 e-value: 1.6E-23 score: 84.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 113..174 e-value: 2.3E-16 score: 62.0 coord: 175..266 e-value: 2.6E-24 score: 88.1 coord: 17..112 e-value: 1.4E-21 score: 79.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 267..329 e-value: 2.6E-7 score: 32.3
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	SSF48452	TPR-like	coord: 521..558 coord: 31..116 coord: 269..305
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 399..446 e-value: 2.2E-12 score: 46.8
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 208..237 e-value: 2.2E-4 score: 19.2 coord: 402..435 e-value: 1.1E-7 score: 29.5 coord: 53..82 e-value: 4.9E-4 score: 18.1 coord: 302..334 e-value: 4.7E-6 score: 24.4 coord: 84..115 e-value: 6.3E-7 score: 27.2 coord: 270..299 e-value: 3.7E-6 score: 24.8 coord: 180..208 e-value: 9.3E-6 score: 23.5 coord: 25..52 e-value: 1.7E-5 score: 22.7 coord: 239..265 e-value: 9.4E-5 score: 20.3 coord: 115..146 e-value: 1.7E-5 score: 22.7 coord: 146..177 e-value: 1.6E-6 score: 25.9 coord: 475..500 e-value: 0.0022 score: 16.0
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 374..395 e-value: 0.58 score: 10.4 coord: 208..237 e-value: 1.4E-5 score: 24.9 coord: 146..175 e-value: 2.7E-6 score: 27.2 coord: 115..145 e-value: 1.6E-7 score: 31.0 coord: 270..298 e-value: 2.3E-5 score: 24.2 coord: 53..82 e-value: 1.5E-5 score: 24.8 coord: 475..499 e-value: 0.0065 score: 16.5 coord: 25..52 e-value: 1.7E-5 score: 24.6 coord: 239..265 e-value: 4.2E-6 score: 26.5 coord: 177..207 e-value: 6.6E-7 score: 29.1 coord: 302..331 e-value: 3.3E-6 score: 26.9 coord: 84..114 e-value: 6.3E-7 score: 29.1
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 117..143 score: 6.993
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 471..501 score: 7.826
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 82..116 score: 11.762
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 435..465 score: 7.739
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 20..50 score: 8.287
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 400..434 score: 11.893
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 272..298 score: 6.665
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 237..271 score: 10.983
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 537..571 score: 7.388
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 369..399 score: 7.322
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 299..333 score: 11.904
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 144..178 score: 11.192
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 51..81 score: 9.964
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 206..236 score: 9.635
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 334..368 score: 5.36
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 180..205 score: 6.566
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 573..698 e-value: 3.5E-40 score: 136.7
None	No IPR available	PANTHER	PTHR24015:SF553	SUBFAMILY NOT NAMED	coord: 269..620 coord: 225..271 coord: 22..64 coord: 62..232
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 269..620 coord: 225..271 coord: 22..64 coord: 62..232

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy4G017810	Cla012069	Watermelon (97103) v1	cgybwmB317
CsGy4G017810	Csa4G418570	Cucumber (Chinese Long) v2	cgybcuB167
CsGy4G017810	MELO3C019152	Melon (DHL92) v3.5.1	cgybmeB286
CsGy4G017810	ClCG04G006010	Watermelon (Charleston Gray)	cgybwcgB285
CsGy4G017810	CSPI04G18760	Wild cucumber (PI 183967)	cgybcpiB170
CsGy4G017810	CmaCh07G011150	Cucurbita maxima (Rimu)	cgybcmaB568
CsGy4G017810	CmoCh07G011630	Cucurbita moschata (Rifu)	cgybcmoB542
CsGy4G017810	Lsi01G017430	Bottle gourd (USVL1VR-Ls)	cgyblsiB237
CsGy4G017810	Cp4.1LG19g02470	Cucurbita pepo (Zucchini)	cgybcpeB521
CsGy4G017810	MELO3C019152.2	Melon (DHL92) v3.6.1	cgybmedB286
CsGy4G017810	CsaV3_4G029130	Cucumber (Chinese Long) v3	cgybcucB171
CsGy4G017810	Cla97C04G072580	Watermelon (97103) v2	cgybwmbB285
CsGy4G017810	Bhi03G002087	Wax gourd	cgybwgoB389
CsGy4G017810	Carg13327	Silver-seed gourd	carcgybB0583

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy4G017810	Cucurbita maxima (Rimu)	cgybcmaB534
CsGy4G017810	Cucurbita moschata (Rifu)	cgybcmoB509
CsGy4G017810	Cucurbita pepo (Zucchini)	cgybcpeB466
CsGy4G017810	Silver-seed gourd	carcgybB0953