CsGy4G016430 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGATCAGCTAACCGATGACCAGATCTCTGAGTTCAAGGAGGCCTTCAGCTTGTTTGACAAGGACGGCGACGGTTCGTTCTTTTTCTATTCTATTTTCTTTTGATTCAGCGTTGCTTTTCCTTCTGCATTGCTCTTCCTCCTCGTCTTCTCGTCACTCTACCAGATCTTTGTTTTCCCTTGGATTTCGGTTTTCTATATCTATTCGTTTCGTTTGGTGTCGGATCCCTGCATCATTTAGCGAATTTTGTTTTGATTTATAAAACGTGGAATCTCTGTTATTCTGTGATGTGATGATTAGTCCTTCTGAATCTGAGTGAAAAATTAGGATATTACGAATTTGGATTCACTCAGTTTCTGTTTTGGTTGTGATCGTTCAGGTTGTATCACAACCAAGGAGCTTGGTACTGTTATGAGGTCGTTAGGTCAGAATCCAACAGAGGCGGAGCTTCAGGACATGATCAATGAGGTGGATGCTGATGGAAATGGAACAATCGACTTTCCAGAGTTCCTAAACCTCATGGCGAGGAAGATGAAGGATACGGACTCAGAGGAAGAGTTGAAAGAGGCGTTCCGTGTGTTCGATAAGGATCAGAATGGATTCATCTCCGCTGCTGAGCTCCGCCATGTGATGACAAATCTTGGCGAGAAACTGACAGAGGAGGAGGTGGATGAGATGATCAGAGAAGCTGATGTGGATGGCGATGGGCAGATTAACTACGATGAATTTGTGAAGGTCATGATGGCCAAGTGA ATGGCGGATCAGCTAACCGATGACCAGATCTCTGAGTTCAAGGAGGCCTTCAGCTTGTTTGACAAGGACGGCGACGGTTGTATCACAACCAAGGAGCTTGGTACTGTTATGAGGTCGTTAGGTCAGAATCCAACAGAGGCGGAGCTTCAGGACATGATCAATGAGGTGGATGCTGATGGAAATGGAACAATCGACTTTCCAGAGTTCCTAAACCTCATGGCGAGGAAGATGAAGGATACGGACTCAGAGGAAGAGTTGAAAGAGGCGTTCCGTGTGTTCGATAAGGATCAGAATGGATTCATCTCCGCTGCTGAGCTCCGCCATGTGATGACAAATCTTGGCGAGAAACTGACAGAGGAGGAGGTGGATGAGATGATCAGAGAAGCTGATGTGGATGGCGATGGGCAGATTAACTACGATGAATTTGTGAAGGTCATGATGGCCAAGTGA ATGGCGGATCAGCTAACCGATGACCAGATCTCTGAGTTCAAGGAGGCCTTCAGCTTGTTTGACAAGGACGGCGACGGTTGTATCACAACCAAGGAGCTTGGTACTGTTATGAGGTCGTTAGGTCAGAATCCAACAGAGGCGGAGCTTCAGGACATGATCAATGAGGTGGATGCTGATGGAAATGGAACAATCGACTTTCCAGAGTTCCTAAACCTCATGGCGAGGAAGATGAAGGATACGGACTCAGAGGAAGAGTTGAAAGAGGCGTTCCGTGTGTTCGATAAGGATCAGAATGGATTCATCTCCGCTGCTGAGCTCCGCCATGTGATGACAAATCTTGGCGAGAAACTGACAGAGGAGGAGGTGGATGAGATGATCAGAGAAGCTGATGTGGATGGCGATGGGCAGATTAACTACGATGAATTTGTGAAGGTCATGATGGCCAAGTGA MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEEEVDEMIREADVDGDGQINYDEFVKVMMAK
BLAST of CsGy4G016430 vs. NCBI nr
Match: XP_008464615.1 (PREDICTED: calmodulin [Cucumis melo] >XP_011653761.1 PREDICTED: calmodulin [Cucumis sativus] >XP_022950459.1 calmodulin [Cucurbita moschata] >XP_022925074.1 calmodulin [Cucurbita moschata] >XP_022966473.1 calmodulin [Cucurbita maxima] >XP_023543497.1 calmodulin [Cucurbita pepo subsp. pepo] >XP_023518884.1 calmodulin [Cucurbita pepo subsp. pepo] >KGN54503.1 hypothetical protein Csa_4G340540 [Cucumis sativus]) HSP 1 Score: 212.6 bits (540), Expect = 9.0e-52 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of CsGy4G016430 vs. NCBI nr
Match: XP_022967918.1 (calmodulin-like [Cucurbita maxima]) HSP 1 Score: 212.6 bits (540), Expect = 9.0e-52 Identity = 148/149 (99.33%), Postives = 148/149 (99.33%), Query Frame = 0
BLAST of CsGy4G016430 vs. NCBI nr
Match: AEG75427.1 (calmodulin [Aquilaria microcarpa]) HSP 1 Score: 211.5 bits (537), Expect = 2.0e-51 Identity = 142/149 (95.30%), Postives = 143/149 (95.97%), Query Frame = 0
BLAST of CsGy4G016430 vs. NCBI nr
Match: XP_012472885.1 (PREDICTED: calmodulin-like [Gossypium raimondii] >KJB21751.1 hypothetical protein B456_004G012100 [Gossypium raimondii]) HSP 1 Score: 211.5 bits (537), Expect = 2.0e-51 Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of CsGy4G016430 vs. NCBI nr
Match: CAA61980.1 (Calmodulin [Bidens pilosa]) HSP 1 Score: 209.9 bits (533), Expect = 5.9e-51 Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of CsGy4G016430 vs. TAIR10
Match: AT3G43810.1 (calmodulin 7) HSP 1 Score: 208.0 bits (528), Expect = 4.0e-54 Identity = 146/149 (97.99%), Postives = 148/149 (99.33%), Query Frame = 0
BLAST of CsGy4G016430 vs. TAIR10
Match: AT2G27030.3 (calmodulin 5) HSP 1 Score: 204.5 bits (519), Expect = 4.5e-53 Identity = 144/149 (96.64%), Postives = 147/149 (98.66%), Query Frame = 0
BLAST of CsGy4G016430 vs. TAIR10
Match: AT3G56800.1 (calmodulin 3) HSP 1 Score: 204.5 bits (519), Expect = 4.5e-53 Identity = 144/149 (96.64%), Postives = 147/149 (98.66%), Query Frame = 0
BLAST of CsGy4G016430 vs. TAIR10
Match: AT5G21274.1 (calmodulin 6) HSP 1 Score: 204.1 bits (518), Expect = 5.8e-53 Identity = 144/149 (96.64%), Postives = 147/149 (98.66%), Query Frame = 0
BLAST of CsGy4G016430 vs. TAIR10
Match: AT1G66410.2 (calmodulin 4) HSP 1 Score: 198.4 bits (503), Expect = 3.2e-51 Identity = 139/159 (87.42%), Postives = 144/159 (90.57%), Query Frame = 0
BLAST of CsGy4G016430 vs. Swiss-Prot
Match: sp|A2WNH1|CALM3_ORYSI (Calmodulin-3 OS=Oryza sativa subsp. indica OX=39946 GN=CAM3 PE=3 SV=2) HSP 1 Score: 208.4 bits (529), Expect = 5.6e-53 Identity = 146/149 (97.99%), Postives = 148/149 (99.33%), Query Frame = 0
BLAST of CsGy4G016430 vs. Swiss-Prot
Match: sp|P62200|CALM1_DAUCA (Calmodulin-1/11/16 OS=Daucus carota OX=4039 GN=CAM-1 PE=2 SV=2) HSP 1 Score: 208.0 bits (528), Expect = 7.3e-53 Identity = 146/149 (97.99%), Postives = 148/149 (99.33%), Query Frame = 0
BLAST of CsGy4G016430 vs. Swiss-Prot
Match: sp|P62199|CALM1_PETHY (Calmodulin-1 OS=Petunia hybrida OX=4102 GN=CAM81 PE=1 SV=2) HSP 1 Score: 208.0 bits (528), Expect = 7.3e-53 Identity = 146/149 (97.99%), Postives = 148/149 (99.33%), Query Frame = 0
BLAST of CsGy4G016430 vs. Swiss-Prot
Match: sp|P59220|CALM7_ARATH (Calmodulin-7 OS=Arabidopsis thaliana OX=3702 GN=CAM7 PE=1 SV=2) HSP 1 Score: 208.0 bits (528), Expect = 7.3e-53 Identity = 146/149 (97.99%), Postives = 148/149 (99.33%), Query Frame = 0
BLAST of CsGy4G016430 vs. Swiss-Prot
Match: sp|P62202|CALM_BRYDI (Calmodulin OS=Bryonia dioica OX=3652 PE=2 SV=2) HSP 1 Score: 208.0 bits (528), Expect = 7.3e-53 Identity = 146/149 (97.99%), Postives = 148/149 (99.33%), Query Frame = 0
BLAST of CsGy4G016430 vs. TrEMBL
Match: tr|A0A1S3CLW9|A0A1S3CLW9_CUCME (calmodulin OS=Cucumis melo OX=3656 GN=LOC103502454 PE=4 SV=1) HSP 1 Score: 212.6 bits (540), Expect = 6.0e-52 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of CsGy4G016430 vs. TrEMBL
Match: tr|A0A0A0KYG1|A0A0A0KYG1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G340540 PE=4 SV=1) HSP 1 Score: 212.6 bits (540), Expect = 6.0e-52 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of CsGy4G016430 vs. TrEMBL
Match: tr|A0A0D2QXA0|A0A0D2QXA0_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_004G012100 PE=4 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 1.3e-51 Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of CsGy4G016430 vs. TrEMBL
Match: tr|A0A0V0H2X4|A0A0V0H2X4_SOLCH (Putative ovule protein (Fragment) OS=Solanum chacoense OX=4108 PE=4 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 1.3e-51 Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of CsGy4G016430 vs. TrEMBL
Match: tr|F6M9V8|F6M9V8_9ROSI (Calmodulin OS=Aquilaria microcarpa OX=690718 GN=cam-3 PE=2 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 1.3e-51 Identity = 142/149 (95.30%), Postives = 143/149 (95.97%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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