CsGy4G015010 (gene) Cucumber (Gy14) v2

Overview
NameCsGy4G015010
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionPentatricopeptide repeat-containing protein At3g09060
LocationChr4 : 19715925 .. 19718030 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGAGCTTCCAAAAGTCATATCCCCTACACTGGTTCTAAAGCTTCTGAAAGCAGAGAAAAACCCCAATGCGGCACTCGCTATATTCGACTCCGCCTGTCAGCATCCTGGTTATGCTCACCCACCTTTCGTATTCCATCATATTCTCCGGCGACTTATGGACCCGAAGCTCGTTGTTCACGTTGGTCGGATCGTGGACCTGATGCGAGCTCAAAGATGCACCTGCTCCGAAGATGTTGCACTGTCGGCTATCAAGGCGTACGCGAAATGTTCAATGCCCGATCAAGCGCTCAATTTGTTTCAGAACATGGTTGACATTTTTGGGTGTAACCCGGGAATTAGGTCATTTAATTCTATGCTTAACGCGTTCATTGAATCTAATCAGTGGCGCGAAGCTGAACTATTTTTCACGTACTTTCAGACGGCGGGCATGTCGCCCAATCTTCAGACTTATAATATTTTGATCAAGATATCGTGCAAGAAGAGGCAATTTGAGAAGGGTAAGGGATTGTTGACATGGATGTTCGAGAATGGTTTGAACCCTGATATTTTAAGCTATGGTACATTAATTAATGCACTTGCGAAGAGTGGTAACTTATTGGATGCCGTGGAGCTGTTCGATGAAATGTCTGTGAGAGGTGTGAACCCTGATGTTATGTGTTATAATATTCTGATTGATGGGTTTCTCAGAAAAGGAGATTTTGTGAAGGCTAATGAGATTTGGAAGAGATTACTTACAGAGTCTTCAGTTTATCCGAGTGTGGAAACATATAACATTATGATAAATGGTTTATGTAAGCTCGGAAAGCTCGATGAAAGTATGGAGATGTGGAATAGAATGAAGAAGAATGAAAAGTCACCCGATTTATTTACTTTTAGTTCCATGATTCACGGCTTGAGCAAAGCAGGAAACTTCAATGCTGCTGAGAAAGTTTTTCAGGAGATGATTGAAAGTGGGTTATCCCCTGATGTGAGAACATATAATGCAATGCTCAGTGGTCTATTTCGAACTGGGAAACTAAATAAATGCTTTGAGTTGTGGAACGTAATGAGTAAAAATAACTGTTGCAACATTGTTAGTTATAACATGCTGATTCAAGGGTTGCTTGACAACAAGAAAGTGGAACAAGCGATTTGTTATTGGCAGCTCTTACACGAGAGGGGCTTAAAGGCAGATTCAACAACATACGGACTGTTGATCAACGGGCTGTGTAAAAATGGATACTTGAATAAGGCTTTAAGGATATTAGAAGAAGCAGAAAATGAGGGAGCTGATTTGGATACTTTTGCGTATTCATCAATGGTTCACGGGTTATGCAAAAAAGGGATGTTGGAACAAGCCGTAGAACTGATTCATCAGATGAAAAAAAATAGACGTAAACTGAATTCTCATGTTTTCAATTCACTGATTAATGGATACGTCCGAGCTTTTAAACTTGAAGAGGCTATTTCTGTTCTTAGGGAAATGAAAAGCAAAGACTGTGCCCCTACTGTAGTTTCCTACAACACTATTATTAACGGTTTGTGTAAGGCAGAAAGATTTAGCGATGCATATCTTTCACTGAAGGAGATGCTGGAAGAGGGTTTGAAGCCTGATATGATTACTTATAGCTTGTTGATTGATGGTCTATGTCGAGGAGAAAAGGTTGACATGGCACTCAATTTGTGGCATCAATGTATTAACAAGCGTCTTAAGCCCGATTTGCAAATGCACAATATAATAATTCACGGTCTTTGTACTGCCCAAAAAGTTGATGTGGCCCTGGAGATCTTTACTCAAATGAGGCAGGTCAACTGTGTTCCAGATCTTGTAACACACAACACCATCATGGAAGGTCTTTACAAAGCTGGAGACTGCGTAGAGGCTTTGAAAATTTGGGACCGCATTTTGGAAGCGGGTCTTCAGCCTGATATTATTTCTTATAACATTACTTTTAAGGGACTCTGCTCTTGCGCTAGAGTTTCAGATGCCATTGAATTCCTATATGATGCTCTTGATCGTGGAATTCTTCCAAATGCCCCAACATGGAACGTTCTTGTAAGAGCAGTTGTCGATGACAAACCTTTAATGGAATATGCTCTTAATACAGAGTCCCGGACGTGA

mRNA sequence

ATGGTTGAGCTTCCAAAAGTCATATCCCCTACACTGGTTCTAAAGCTTCTGAAAGCAGAGAAAAACCCCAATGCGGCACTCGCTATATTCGACTCCGCCTGTCAGCATCCTGGTTATGCTCACCCACCTTTCGTATTCCATCATATTCTCCGGCGACTTATGGACCCGAAGCTCGTTGTTCACGTTGGTCGGATCGTGGACCTGATGCGAGCTCAAAGATGCACCTGCTCCGAAGATGTTGCACTGTCGGCTATCAAGGCGTACGCGAAATGTTCAATGCCCGATCAAGCGCTCAATTTGTTTCAGAACATGGTTGACATTTTTGGGTGTAACCCGGGAATTAGGTCATTTAATTCTATGCTTAACGCGTTCATTGAATCTAATCAGTGGCGCGAAGCTGAACTATTTTTCACGTACTTTCAGACGGCGGGCATGTCGCCCAATCTTCAGACTTATAATATTTTGATCAAGATATCGTGCAAGAAGAGGCAATTTGAGAAGGGTAAGGGATTGTTGACATGGATGTTCGAGAATGGTTTGAACCCTGATATTTTAAGCTATGGTACATTAATTAATGCACTTGCGAAGAGTGGTAACTTATTGGATGCCGTGGAGCTGTTCGATGAAATGTCTGTGAGAGGTGTGAACCCTGATGTTATGTGTTATAATATTCTGATTGATGGGTTTCTCAGAAAAGGAGATTTTGTGAAGGCTAATGAGATTTGGAAGAGATTACTTACAGAGTCTTCAGTTTATCCGAGTGTGGAAACATATAACATTATGATAAATGGTTTATGTAAGCTCGGAAAGCTCGATGAAAGTATGGAGATGTGGAATAGAATGAAGAAGAATGAAAAGTCACCCGATTTATTTACTTTTAGTTCCATGATTCACGGCTTGAGCAAAGCAGGAAACTTCAATGCTGCTGAGAAAGTTTTTCAGGAGATGATTGAAAGTGGGTTATCCCCTGATGTGAGAACATATAATGCAATGCTCAGTGGTCTATTTCGAACTGGGAAACTAAATAAATGCTTTGAGTTGTGGAACGTAATGAGTAAAAATAACTGTTGCAACATTGTTAGTTATAACATGCTGATTCAAGGGTTGCTTGACAACAAGAAAGTGGAACAAGCGATTTGTTATTGGCAGCTCTTACACGAGAGGGGCTTAAAGGCAGATTCAACAACATACGGACTGTTGATCAACGGGCTGTGTAAAAATGGATACTTGAATAAGGCTTTAAGGATATTAGAAGAAGCAGAAAATGAGGGAGCTGATTTGGATACTTTTGCGTATTCATCAATGGTTCACGGGTTATGCAAAAAAGGGATGTTGGAACAAGCCGTAGAACTGATTCATCAGATGAAAAAAAATAGACGTAAACTGAATTCTCATGTTTTCAATTCACTGATTAATGGATACGTCCGAGCTTTTAAACTTGAAGAGGCTATTTCTGTTCTTAGGGAAATGAAAAGCAAAGACTGTGCCCCTACTGTAGTTTCCTACAACACTATTATTAACGGTTTGTGTAAGGCAGAAAGATTTAGCGATGCATATCTTTCACTGAAGGAGATGCTGGAAGAGGGTTTGAAGCCTGATATGATTACTTATAGCTTGTTGATTGATGGTCTATGTCGAGGAGAAAAGGTTGACATGGCACTCAATTTGTGGCATCAATGTATTAACAAGCGTCTTAAGCCCGATTTGCAAATGCACAATATAATAATTCACGGTCTTTGTACTGCCCAAAAAGTTGATGTGGCCCTGGAGATCTTTACTCAAATGAGGCAGGTCAACTGTGTTCCAGATCTTGTAACACACAACACCATCATGGAAGGTCTTTACAAAGCTGGAGACTGCGTAGAGGCTTTGAAAATTTGGGACCGCATTTTGGAAGCGGGTCTTCAGCCTGATATTATTTCTTATAACATTACTTTTAAGGGACTCTGCTCTTGCGCTAGAGTTTCAGATGCCATTGAATTCCTATATGATGCTCTTGATCGTGGAATTCTTCCAAATGCCCCAACATGGAACGTTCTTGTAAGAGCAGTTGTCGATGACAAACCTTTAATGGAATATGCTCTTAATACAGAGTCCCGGACGTGA

Coding sequence (CDS)

ATGGTTGAGCTTCCAAAAGTCATATCCCCTACACTGGTTCTAAAGCTTCTGAAAGCAGAGAAAAACCCCAATGCGGCACTCGCTATATTCGACTCCGCCTGTCAGCATCCTGGTTATGCTCACCCACCTTTCGTATTCCATCATATTCTCCGGCGACTTATGGACCCGAAGCTCGTTGTTCACGTTGGTCGGATCGTGGACCTGATGCGAGCTCAAAGATGCACCTGCTCCGAAGATGTTGCACTGTCGGCTATCAAGGCGTACGCGAAATGTTCAATGCCCGATCAAGCGCTCAATTTGTTTCAGAACATGGTTGACATTTTTGGGTGTAACCCGGGAATTAGGTCATTTAATTCTATGCTTAACGCGTTCATTGAATCTAATCAGTGGCGCGAAGCTGAACTATTTTTCACGTACTTTCAGACGGCGGGCATGTCGCCCAATCTTCAGACTTATAATATTTTGATCAAGATATCGTGCAAGAAGAGGCAATTTGAGAAGGGTAAGGGATTGTTGACATGGATGTTCGAGAATGGTTTGAACCCTGATATTTTAAGCTATGGTACATTAATTAATGCACTTGCGAAGAGTGGTAACTTATTGGATGCCGTGGAGCTGTTCGATGAAATGTCTGTGAGAGGTGTGAACCCTGATGTTATGTGTTATAATATTCTGATTGATGGGTTTCTCAGAAAAGGAGATTTTGTGAAGGCTAATGAGATTTGGAAGAGATTACTTACAGAGTCTTCAGTTTATCCGAGTGTGGAAACATATAACATTATGATAAATGGTTTATGTAAGCTCGGAAAGCTCGATGAAAGTATGGAGATGTGGAATAGAATGAAGAAGAATGAAAAGTCACCCGATTTATTTACTTTTAGTTCCATGATTCACGGCTTGAGCAAAGCAGGAAACTTCAATGCTGCTGAGAAAGTTTTTCAGGAGATGATTGAAAGTGGGTTATCCCCTGATGTGAGAACATATAATGCAATGCTCAGTGGTCTATTTCGAACTGGGAAACTAAATAAATGCTTTGAGTTGTGGAACGTAATGAGTAAAAATAACTGTTGCAACATTGTTAGTTATAACATGCTGATTCAAGGGTTGCTTGACAACAAGAAAGTGGAACAAGCGATTTGTTATTGGCAGCTCTTACACGAGAGGGGCTTAAAGGCAGATTCAACAACATACGGACTGTTGATCAACGGGCTGTGTAAAAATGGATACTTGAATAAGGCTTTAAGGATATTAGAAGAAGCAGAAAATGAGGGAGCTGATTTGGATACTTTTGCGTATTCATCAATGGTTCACGGGTTATGCAAAAAAGGGATGTTGGAACAAGCCGTAGAACTGATTCATCAGATGAAAAAAAATAGACGTAAACTGAATTCTCATGTTTTCAATTCACTGATTAATGGATACGTCCGAGCTTTTAAACTTGAAGAGGCTATTTCTGTTCTTAGGGAAATGAAAAGCAAAGACTGTGCCCCTACTGTAGTTTCCTACAACACTATTATTAACGGTTTGTGTAAGGCAGAAAGATTTAGCGATGCATATCTTTCACTGAAGGAGATGCTGGAAGAGGGTTTGAAGCCTGATATGATTACTTATAGCTTGTTGATTGATGGTCTATGTCGAGGAGAAAAGGTTGACATGGCACTCAATTTGTGGCATCAATGTATTAACAAGCGTCTTAAGCCCGATTTGCAAATGCACAATATAATAATTCACGGTCTTTGTACTGCCCAAAAAGTTGATGTGGCCCTGGAGATCTTTACTCAAATGAGGCAGGTCAACTGTGTTCCAGATCTTGTAACACACAACACCATCATGGAAGGTCTTTACAAAGCTGGAGACTGCGTAGAGGCTTTGAAAATTTGGGACCGCATTTTGGAAGCGGGTCTTCAGCCTGATATTATTTCTTATAACATTACTTTTAAGGGACTCTGCTCTTGCGCTAGAGTTTCAGATGCCATTGAATTCCTATATGATGCTCTTGATCGTGGAATTCTTCCAAATGCCCCAACATGGAACGTTCTTGTAAGAGCAGTTGTCGATGACAAACCTTTAATGGAATATGCTCTTAATACAGAGTCCCGGACGTGA

Protein sequence

MVELPKVISPTLVLKLLKAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVVHVGRIVDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVVDDKPLMEYALNTESRT
Homology
[Close]
BLAST of CsGy4G015010 vs. NCBI nr
Match: XP_004147925.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g09060 [Cucumis sativus] >KGN54355.1 hypothetical protein Csa_4G308460 [Cucumis sativus])

HSP 1 Score: 307.8 bits (787), Expect = 9.7e-80
Identity = 394/394 (100.00%), Postives = 394/394 (100.00%), Query Frame = 0 

Query: 1   MVELPKVISPTLVLKLLKAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVV 60
           MVELPKVISPTLVLKLLKAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVV
Sbjct: 1   MVELPKVISPTLVLKLLKAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVV 60

Query: 61  HVGRIVDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSM 120
           HVGRIVDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSM
Sbjct: 61  HVGRIVDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSM 120

Query: 121 LNAFIESNQWREAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           LNAFIESNQWREAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 LNAFIESNQWREAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXRLLTESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKNEKSXXXXXXXXXXXXX 300
           XXXRLLTESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKNEKSXXXXXXXXXXXXX
Sbjct: 241 XXXRLLTESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKNEKSXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKNNCCNIV 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKNNCCNIV
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKNNCCNIV 360

Query: 361 SYNMLIQGLLDNKKVEQAICYWQLLHERGLKADS 395
           SYNMLIQGLLDNKKVEQAICYWQLLHERGLKADS
Sbjct: 361 SYNMLIQGLLDNKKVEQAICYWQLLHERGLKADS 394

[Close]
BLAST of CsGy4G015010 vs. NCBI nr
Match: XP_008449171.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g09060 isoform X1 [Cucumis melo] >XP_016900802.1 PREDICTED: pentatricopeptide repeat-containing protein At3g09060 isoform X1 [Cucumis melo])

HSP 1 Score: 275.4 bits (703), Expect = 5.3e-70
Identity = 366/394 (92.89%), Postives = 374/394 (94.92%), Query Frame = 0 

Query: 1   MVELPKVISPTLVLKLLKAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVV 60
           MVELPKV+SP LVLKLLKAEKNPNAALAIFDSAC+HPGYAH PFVFH+ILRRL+DPKLVV
Sbjct: 1   MVELPKVLSPALVLKLLKAEKNPNAALAIFDSACRHPGYAHSPFVFHYILRRLIDPKLVV 60

Query: 61  HVGRIVDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSM 120
           HVGRIVDLMRAQRCTCSEDVAL+AIKAYAKCSMPDQALNLFQNMVDIFGC PGIRSFNSM
Sbjct: 61  HVGRIVDLMRAQRCTCSEDVALTAIKAYAKCSMPDQALNLFQNMVDIFGCEPGIRSFNSM 120

Query: 121 LNAFIESNQWREAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           LNAF+ESNQWR AE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 LNAFVESNQWRRAELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXRLLTESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKNEKSXXXXXXXXXXXXX 300
           XX RLL   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  NE+S   XXXXXXXXXX
Sbjct: 241 XXKRLLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNERSLDLXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKNNCCNIV 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     SKNNCCNIV
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWDVMSKNNCCNIV 360

Query: 361 SYNMLIQGLLDNKKVEQAICYWQLLHERGLKADS 395
           SYN+LIQGLLDNKKVEQAICYWQ LHERGLKADS
Sbjct: 361 SYNILIQGLLDNKKVEQAICYWQFLHERGLKADS 394

[Close]
BLAST of CsGy4G015010 vs. NCBI nr
Match: XP_016900803.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g09060 isoform X2 [Cucumis melo])

HSP 1 Score: 275.4 bits (703), Expect = 5.3e-70
Identity = 366/394 (92.89%), Postives = 374/394 (94.92%), Query Frame = 0 

Query: 1   MVELPKVISPTLVLKLLKAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVV 60
           MVELPKV+SP LVLKLLKAEKNPNAALAIFDSAC+HPGYAH PFVFH+ILRRL+DPKLVV
Sbjct: 1   MVELPKVLSPALVLKLLKAEKNPNAALAIFDSACRHPGYAHSPFVFHYILRRLIDPKLVV 60

Query: 61  HVGRIVDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSM 120
           HVGRIVDLMRAQRCTCSEDVAL+AIKAYAKCSMPDQALNLFQNMVDIFGC PGIRSFNSM
Sbjct: 61  HVGRIVDLMRAQRCTCSEDVALTAIKAYAKCSMPDQALNLFQNMVDIFGCEPGIRSFNSM 120

Query: 121 LNAFIESNQWREAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           LNAF+ESNQWR AE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 LNAFVESNQWRRAELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXRLLTESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKNEKSXXXXXXXXXXXXX 300
           XX RLL   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  NE+S   XXXXXXXXXX
Sbjct: 241 XXKRLLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNERSLDLXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKNNCCNIV 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     SKNNCCNIV
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWDVMSKNNCCNIV 360

Query: 361 SYNMLIQGLLDNKKVEQAICYWQLLHERGLKADS 395
           SYN+LIQGLLDNKKVEQAICYWQ LHERGLKADS
Sbjct: 361 SYNILIQGLLDNKKVEQAICYWQFLHERGLKADS 394

[Close]
BLAST of CsGy4G015010 vs. NCBI nr
Match: XP_022151549.1 (pentatricopeptide repeat-containing protein At3g09060 [Momordica charantia] >XP_022151550.1 pentatricopeptide repeat-containing protein At3g09060 [Momordica charantia] >XP_022151551.1 pentatricopeptide repeat-containing protein At3g09060 [Momordica charantia] >XP_022151552.1 pentatricopeptide repeat-containing protein At3g09060 [Momordica charantia])

HSP 1 Score: 248.1 bits (632), Expect = 9.1e-62
Identity = 119/134 (88.81%), Postives = 127/134 (94.78%), Query Frame = 0 

Query: 1   MVELPKVISPTLVLKLLKAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVV 60
           MVELPK++SPTLVLKLLKAEKNPN+ALA+FDSACQHPGYAH PFVFHHILRRL+DPKLVV
Sbjct: 1   MVELPKILSPTLVLKLLKAEKNPNSALALFDSACQHPGYAHSPFVFHHILRRLVDPKLVV 60

Query: 61  HVGRIVDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSM 120
           HVGRIVDL+RAQRC CSEDVAL+AIKAYAKCSMPDQAL LFQ MVDIFGC PGIRS+NSM
Sbjct: 61  HVGRIVDLIRAQRCICSEDVALTAIKAYAKCSMPDQALYLFQGMVDIFGCRPGIRSYNSM 120

Query: 121 LNAFIESNQWREAE 135
           LNAFIESNQW  AE
Sbjct: 121 LNAFIESNQWSRAE 134

[Close]
BLAST of CsGy4G015010 vs. NCBI nr
Match: XP_022966568.1 (pentatricopeptide repeat-containing protein At3g09060 isoform X1 [Cucurbita maxima])

HSP 1 Score: 242.3 bits (617), Expect = 5.0e-60
Identity = 343/393 (87.28%), Postives = 358/393 (91.09%), Query Frame = 0 

Query: 1   MVELPKVISPTLVLKLLKAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVV 60
           MVELPKV+SPTLVLKLLKAEKNPN+ALA+FDSA QHPGYAH PFVFH+ILRRL+DPKLVV
Sbjct: 1   MVELPKVLSPTLVLKLLKAEKNPNSALALFDSASQHPGYAHSPFVFHNILRRLIDPKLVV 60

Query: 61  HVGRIVDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSM 120
           HVGRIV+L+R+QRC CSEDVAL+AIKAY KCSMPD AL+LFQ MVDIFGC PGIRS+NSM
Sbjct: 61  HVGRIVELIRSQRCICSEDVALTAIKAYTKCSMPDDALHLFQRMVDIFGCKPGIRSYNSM 120

Query: 121 LNAFIESNQWREAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           LNAFIESNQW  AE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 LNAFIESNQWSRAELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXRLLTESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKNEKSXXXXXXXXXXXXX 300
              RLL   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  N++S   XXXXXXXXXX
Sbjct: 241 VWERLLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQRSLDLXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKNNCCNIV 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         SKNNCCNIV
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKCFELWELMSKNNCCNIV 360

Query: 361 SYNMLIQGLLDNKKVEQAICYWQLLHERGLKAD 394
           SYN+ IQGL DNKKVE+AIC WQLLHERG  AD
Sbjct: 361 SYNIFIQGLFDNKKVEEAICNWQLLHERGFTAD 393

[Close]
BLAST of CsGy4G015010 vs. TAIR10
Match: AT3G09060.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 177.9 bits (450), Expect = 2.1e-44
Identity = 84/134 (62.69%), Postives = 105/134 (78.36%), Query Frame = 0 

Query: 1   MVELPKVISPTLVLKLLKAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVV 60
           MV  PK +SP  VLKLLK+EKNP AA A+FDSA +HPGYAH   V+HHILRRL + ++V 
Sbjct: 1   MVVFPKSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVN 60

Query: 61  HVGRIVDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSM 120
           HV RIV+L+R+Q C C EDVALS IK Y K SMPDQAL++F+ M +IFGC P IRS+N++
Sbjct: 61  HVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTL 120

Query: 121 LNAFIESNQWREAE 135
           LNAF+E+ QW + E
Sbjct: 121 LNAFVEAKQWVKVE 134

[Close]
BLAST of CsGy4G015010 vs. TAIR10
Match: AT5G46100.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 72.4 bits (176), Expect = 1.2e-12
Identity = 41/131 (31.30%), Postives = 71/131 (54.20%), Query Frame = 0 

Query: 1   MVELPKVISPTLVLKLLKAEKNPNAALAIFDSACQH--PGYAHPPFVFHHILRRLMDPKL 60
           M +  K I+P+ V+KL++AEK+   ++A+FDSA      GY H    F +++ RL+    
Sbjct: 7   MFKWSKNITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANK 66

Query: 61  VVHVGRIVDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFN 120
                 ++  M+ + C  SED+ LS  + Y +   P  +L +F  M D F C+P  +++ 
Sbjct: 67  FKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKD-FDCDPSQKAYV 126

Query: 121 SMLNAFIESNQ 130
           ++L   +E NQ
Sbjct: 127 TVLAILVEENQ 136

[Close]
BLAST of CsGy4G015010 vs. TAIR10
Match: AT1G05600.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 65.9 bits (159), Expect = 1.2e-10
Identity = 35/134 (26.12%), Postives = 75/134 (55.97%), Query Frame = 0 

Query: 1   MVELPKVISPTLVLKLLKAEKNPNAALAIFDSACQH-PGYAHPPFVFHHILRRLMDPKLV 60
           +V  P+V++P+L+ ++LK +KNP  AL +F+ A +  P Y H   V+  ++  L     V
Sbjct: 3   VVRWPRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRV 62

Query: 61  VHVGRIVDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNS 120
           + +  +++ M+   C C + V  S I+ +++    + A++LF+++ + F C     SF++
Sbjct: 63  LEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHE-FNCVNWSLSFDT 122

Query: 121 MLNAFIESNQWREA 134
           +L   ++ ++   A
Sbjct: 123 LLQEMVKESELEAA 135

[Close]
BLAST of CsGy4G015010 vs. TAIR10
Match: AT3G48810.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 59.3 bits (142), Expect = 1.1e-08
Identity = 33/117 (28.21%), Postives = 60/117 (51.28%), Query Frame = 0 

Query: 13  VLKLLKAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVVHVGRIVDLMRAQ 72
           V+K L+ E     AL  F S      + H P  F  ++R+L     V  V  ++  M+ Q
Sbjct: 46  VVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQ 105

Query: 73  RCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQ 130
              CSED+ +S I  Y +  + ++A+ +F  + + FGC+P ++ +N +L+  +  N+
Sbjct: 106 GFHCSEDLFISVISVYRQVGLAERAVEMFYRIKE-FGCDPSVKIYNHVLDTLLGENR 161

[Close]
BLAST of CsGy4G015010 vs. TAIR10
Match: AT5G18475.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 56.2 bits (134), Expect = 9.2e-08
Identity = 31/124 (25.00%), Postives = 62/124 (50.00%), Query Frame = 0 

Query: 6   KVISPTLVLKLLKAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVVHVGRI 65
           K IS    + L+K E++P   L IF+ A Q  G+ H    +  +L  L+  K  + V  I
Sbjct: 52  KFISHESAVSLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAI 111

Query: 66  VDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFI 125
           +  M+ + C   E + L+ ++ +++  + D+ + +F  +  I    P + + ++ LN  I
Sbjct: 112 LHQMKYETCRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLI 171

Query: 126 ESNQ 130
           +S +
Sbjct: 172 DSGE 175

[Close]
BLAST of CsGy4G015010 vs. Swiss-Prot
Match: sp|Q9SS81|PP221_ARATH (Pentatricopeptide repeat-containing protein At3g09060 OS=Arabidopsis thaliana OX=3702 GN=At3g09060 PE=2 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 3.8e-43
Identity = 84/134 (62.69%), Postives = 105/134 (78.36%), Query Frame = 0 

Query: 1   MVELPKVISPTLVLKLLKAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVV 60
           MV  PK +SP  VLKLLK+EKNP AA A+FDSA +HPGYAH   V+HHILRRL + ++V 
Sbjct: 1   MVVFPKSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVN 60

Query: 61  HVGRIVDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSM 120
           HV RIV+L+R+Q C C EDVALS IK Y K SMPDQAL++F+ M +IFGC P IRS+N++
Sbjct: 61  HVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTL 120

Query: 121 LNAFIESNQWREAE 135
           LNAF+E+ QW + E
Sbjct: 121 LNAFVEAKQWVKVE 134

[Close]
BLAST of CsGy4G015010 vs. Swiss-Prot
Match: sp|Q9FNL2|PP418_ARATH (Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana OX=3702 GN=At5g46100 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 2.2e-11
Identity = 41/131 (31.30%), Postives = 71/131 (54.20%), Query Frame = 0 

Query: 1   MVELPKVISPTLVLKLLKAEKNPNAALAIFDSACQH--PGYAHPPFVFHHILRRLMDPKL 60
           M +  K I+P+ V+KL++AEK+   ++A+FDSA      GY H    F +++ RL+    
Sbjct: 7   MFKWSKNITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANK 66

Query: 61  VVHVGRIVDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFN 120
                 ++  M+ + C  SED+ LS  + Y +   P  +L +F  M D F C+P  +++ 
Sbjct: 67  FKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKD-FDCDPSQKAYV 126

Query: 121 SMLNAFIESNQ 130
           ++L   +E NQ
Sbjct: 127 TVLAILVEENQ 136

[Close]
BLAST of CsGy4G015010 vs. Swiss-Prot
Match: sp|Q9SYK1|PPR11_ARATH (Pentatricopeptide repeat-containing protein At1g05600 OS=Arabidopsis thaliana OX=3702 GN=At1g05600 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 2.1e-09
Identity = 35/134 (26.12%), Postives = 75/134 (55.97%), Query Frame = 0 

Query: 1   MVELPKVISPTLVLKLLKAEKNPNAALAIFDSACQH-PGYAHPPFVFHHILRRLMDPKLV 60
           +V  P+V++P+L+ ++LK +KNP  AL +F+ A +  P Y H   V+  ++  L     V
Sbjct: 3   VVRWPRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRV 62

Query: 61  VHVGRIVDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNS 120
           + +  +++ M+   C C + V  S I+ +++    + A++LF+++ + F C     SF++
Sbjct: 63  LEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHE-FNCVNWSLSFDT 122

Query: 121 MLNAFIESNQWREA 134
           +L   ++ ++   A
Sbjct: 123 LLQEMVKESELEAA 135

[Close]
BLAST of CsGy4G015010 vs. Swiss-Prot
Match: sp|Q9M302|PP270_ARATH (Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana OX=3702 GN=At3g48810 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.0e-07
Identity = 33/117 (28.21%), Postives = 60/117 (51.28%), Query Frame = 0 

Query: 13  VLKLLKAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVVHVGRIVDLMRAQ 72
           V+K L+ E     AL  F S      + H P  F  ++R+L     V  V  ++  M+ Q
Sbjct: 46  VVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQ 105

Query: 73  RCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQ 130
              CSED+ +S I  Y +  + ++A+ +F  + + FGC+P ++ +N +L+  +  N+
Sbjct: 106 GFHCSEDLFISVISVYRQVGLAERAVEMFYRIKE-FGCDPSVKIYNHVLDTLLGENR 161

[Close]
BLAST of CsGy4G015010 vs. Swiss-Prot
Match: sp|Q3E9F0|PP392_ARATH (Pentatricopeptide repeat-containing protein At5g18475 OS=Arabidopsis thaliana OX=3702 GN=At5g18475 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.7e-06
Identity = 31/124 (25.00%), Postives = 62/124 (50.00%), Query Frame = 0 

Query: 6   KVISPTLVLKLLKAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVVHVGRI 65
           K IS    + L+K E++P   L IF+ A Q  G+ H    +  +L  L+  K  + V  I
Sbjct: 52  KFISHESAVSLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAI 111

Query: 66  VDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFI 125
           +  M+ + C   E + L+ ++ +++  + D+ + +F  +  I    P + + ++ LN  I
Sbjct: 112 LHQMKYETCRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLI 171

Query: 126 ESNQ 130
           +S +
Sbjct: 172 DSGE 175

[Close]
BLAST of CsGy4G015010 vs. TrEMBL
Match: tr|A0A0A0KXH4|A0A0A0KXH4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G308460 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 6.4e-80
Identity = 394/394 (100.00%), Postives = 394/394 (100.00%), Query Frame = 0 

Query: 1   MVELPKVISPTLVLKLLKAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVV 60
           MVELPKVISPTLVLKLLKAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVV
Sbjct: 1   MVELPKVISPTLVLKLLKAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVV 60

Query: 61  HVGRIVDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSM 120
           HVGRIVDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSM
Sbjct: 61  HVGRIVDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSM 120

Query: 121 LNAFIESNQWREAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           LNAFIESNQWREAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 LNAFIESNQWREAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXRLLTESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKNEKSXXXXXXXXXXXXX 300
           XXXRLLTESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKNEKSXXXXXXXXXXXXX
Sbjct: 241 XXXRLLTESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKNEKSXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKNNCCNIV 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKNNCCNIV
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKNNCCNIV 360

Query: 361 SYNMLIQGLLDNKKVEQAICYWQLLHERGLKADS 395
           SYNMLIQGLLDNKKVEQAICYWQLLHERGLKADS
Sbjct: 361 SYNMLIQGLLDNKKVEQAICYWQLLHERGLKADS 394

[Close]
BLAST of CsGy4G015010 vs. TrEMBL
Match: tr|A0A1S4DXU6|A0A1S4DXU6_CUCME (pentatricopeptide repeat-containing protein At3g09060 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491116 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 3.5e-70
Identity = 366/394 (92.89%), Postives = 374/394 (94.92%), Query Frame = 0 

Query: 1   MVELPKVISPTLVLKLLKAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVV 60
           MVELPKV+SP LVLKLLKAEKNPNAALAIFDSAC+HPGYAH PFVFH+ILRRL+DPKLVV
Sbjct: 1   MVELPKVLSPALVLKLLKAEKNPNAALAIFDSACRHPGYAHSPFVFHYILRRLIDPKLVV 60

Query: 61  HVGRIVDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSM 120
           HVGRIVDLMRAQRCTCSEDVAL+AIKAYAKCSMPDQALNLFQNMVDIFGC PGIRSFNSM
Sbjct: 61  HVGRIVDLMRAQRCTCSEDVALTAIKAYAKCSMPDQALNLFQNMVDIFGCEPGIRSFNSM 120

Query: 121 LNAFIESNQWREAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           LNAF+ESNQWR AE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 LNAFVESNQWRRAELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXRLLTESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKNEKSXXXXXXXXXXXXX 300
           XX RLL   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  NE+S   XXXXXXXXXX
Sbjct: 241 XXKRLLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNERSLDLXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKNNCCNIV 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     SKNNCCNIV
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWDVMSKNNCCNIV 360

Query: 361 SYNMLIQGLLDNKKVEQAICYWQLLHERGLKADS 395
           SYN+LIQGLLDNKKVEQAICYWQ LHERGLKADS
Sbjct: 361 SYNILIQGLLDNKKVEQAICYWQFLHERGLKADS 394

[Close]
BLAST of CsGy4G015010 vs. TrEMBL
Match: tr|A0A1S4DXV0|A0A1S4DXV0_CUCME (pentatricopeptide repeat-containing protein At3g09060 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491116 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 3.5e-70
Identity = 366/394 (92.89%), Postives = 374/394 (94.92%), Query Frame = 0 

Query: 1   MVELPKVISPTLVLKLLKAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVV 60
           MVELPKV+SP LVLKLLKAEKNPNAALAIFDSAC+HPGYAH PFVFH+ILRRL+DPKLVV
Sbjct: 1   MVELPKVLSPALVLKLLKAEKNPNAALAIFDSACRHPGYAHSPFVFHYILRRLIDPKLVV 60

Query: 61  HVGRIVDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSM 120
           HVGRIVDLMRAQRCTCSEDVAL+AIKAYAKCSMPDQALNLFQNMVDIFGC PGIRSFNSM
Sbjct: 61  HVGRIVDLMRAQRCTCSEDVALTAIKAYAKCSMPDQALNLFQNMVDIFGCEPGIRSFNSM 120

Query: 121 LNAFIESNQWREAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           LNAF+ESNQWR AE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 LNAFVESNQWRRAELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXRLLTESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKNEKSXXXXXXXXXXXXX 300
           XX RLL   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  NE+S   XXXXXXXXXX
Sbjct: 241 XXKRLLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNERSLDLXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKNNCCNIV 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     SKNNCCNIV
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWDVMSKNNCCNIV 360

Query: 361 SYNMLIQGLLDNKKVEQAICYWQLLHERGLKADS 395
           SYN+LIQGLLDNKKVEQAICYWQ LHERGLKADS
Sbjct: 361 SYNILIQGLLDNKKVEQAICYWQFLHERGLKADS 394

[Close]
BLAST of CsGy4G015010 vs. TrEMBL
Match: tr|M5WHA8|M5WHA8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G271000 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 6.1e-46
Identity = 93/134 (69.40%), Postives = 111/134 (82.84%), Query Frame = 0 

Query: 1   MVELPKVISPTLVLKLLKAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVV 60
           MV+ PK +SP  VLKLL+AEKNP++ALA+ DSA +HP Y H P VFHHILRRL+DPKLV 
Sbjct: 1   MVDFPKSLSPKRVLKLLQAEKNPHSALALLDSASRHPNYNHSPDVFHHILRRLLDPKLVA 60

Query: 61  HVGRIVDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSM 120
           HV R+V+L+R Q+C C EDVAL+ IKAYAK SMPD+AL +FQ M +IFGC PGIRS+NS+
Sbjct: 61  HVDRVVELIRTQKCKCPEDVALTVIKAYAKNSMPDKALAVFQQMEEIFGCAPGIRSYNSL 120

Query: 121 LNAFIESNQWREAE 135
           LNAFIESNQW  AE
Sbjct: 121 LNAFIESNQWERAE 134

[Close]
BLAST of CsGy4G015010 vs. TrEMBL
Match: tr|D7SJS0|D7SJS0_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0004g07180 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.0e-45
Identity = 91/134 (67.91%), Postives = 111/134 (82.84%), Query Frame = 0 

Query: 1   MVELPKVISPTLVLKLLKAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVV 60
           M   PK +SP  V+KLLK+EKNP++AL+IFDS  + PGY+H P+VFHHIL+RL DPKLV 
Sbjct: 1   MASAPKSLSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVA 60

Query: 61  HVGRIVDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSM 120
           HV RIV+L+R Q+C C EDVAL+ IKAYAK SMPDQAL++FQ M +IFGC PGIRS+NS+
Sbjct: 61  HVSRIVELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSL 120

Query: 121 LNAFIESNQWREAE 135
           LNA IESN+W EAE
Sbjct: 121 LNALIESNKWDEAE 134

The following BLAST results are available for this feature:
BLAST of CsGy4G015010 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004147925.19.7e-80100.00PREDICTED: pentatricopeptide repeat-containing protein At3g09060 [Cucumis sativu... [more]
XP_008449171.15.3e-7092.89PREDICTED: pentatricopeptide repeat-containing protein At3g09060 isoform X1 [Cuc... [more]
XP_016900803.15.3e-7092.89PREDICTED: pentatricopeptide repeat-containing protein At3g09060 isoform X2 [Cuc... [more]
XP_022151549.19.1e-6288.81pentatricopeptide repeat-containing protein At3g09060 [Momordica charantia] >XP_... [more]
XP_022966568.15.0e-6087.28pentatricopeptide repeat-containing protein At3g09060 isoform X1 [Cucurbita maxi... [more]
BLAST of CsGy4G015010 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G09060.12.1e-4462.69Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G46100.11.2e-1231.30Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G05600.11.2e-1026.12Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G48810.11.1e-0828.21Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G18475.19.2e-0825.00Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of CsGy4G015010 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SS81|PP221_ARATH3.8e-4362.69Pentatricopeptide repeat-containing protein At3g09060 OS=Arabidopsis thaliana OX... [more]
sp|Q9FNL2|PP418_ARATH2.2e-1131.30Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana OX... [more]
sp|Q9SYK1|PPR11_ARATH2.1e-0926.12Pentatricopeptide repeat-containing protein At1g05600 OS=Arabidopsis thaliana OX... [more]
sp|Q9M302|PP270_ARATH2.0e-0728.21Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana OX... [more]
sp|Q3E9F0|PP392_ARATH1.7e-0625.00Pentatricopeptide repeat-containing protein At5g18475 OS=Arabidopsis thaliana OX... [more]
BLAST of CsGy4G015010 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KXH4|A0A0A0KXH4_CUCSA6.4e-80100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G308460 PE=4 SV=1[more]
tr|A0A1S4DXU6|A0A1S4DXU6_CUCME3.5e-7092.89pentatricopeptide repeat-containing protein At3g09060 isoform X1 OS=Cucumis melo... [more]
tr|A0A1S4DXV0|A0A1S4DXV0_CUCME3.5e-7092.89pentatricopeptide repeat-containing protein At3g09060 isoform X2 OS=Cucumis melo... [more]
tr|M5WHA8|M5WHA8_PRUPE6.1e-4669.40Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G271000 PE=4 SV=1[more]
tr|D7SJS0|D7SJS0_VITVI1.0e-4567.91Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0004g07180 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0009451 RNA modification
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy4G015010.1CsGy4G015010.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 445..465
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 2..616
coord: 622..688
NoneNo IPR availablePANTHERPTHR24015:SF626SUBFAMILY NOT NAMEDcoord: 622..688
NoneNo IPR availablePANTHERPTHR24015:SF626SUBFAMILY NOT NAMEDcoord: 2..616
NoneNo IPR availableSUPERFAMILYSSF81901HCP-likecoord: 219..426
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 466..495
e-value: 1.3E-7
score: 31.2
coord: 85..105
e-value: 0.062
score: 13.5
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 602..651
e-value: 1.0E-11
score: 44.7
coord: 358..406
e-value: 6.6E-12
score: 45.3
coord: 112..161
e-value: 9.4E-9
score: 35.2
coord: 182..230
e-value: 6.3E-13
score: 48.6
coord: 253..302
e-value: 1.0E-15
score: 57.5
coord: 497..546
e-value: 6.1E-17
score: 61.4
coord: 323..356
e-value: 3.2E-8
score: 33.5
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 424..456
e-value: 1.7E-8
score: 33.9
coord: 564..596
e-value: 3.3E-7
score: 29.8
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 605..639
e-value: 1.1E-6
score: 26.4
coord: 116..148
e-value: 0.0014
score: 16.7
coord: 571..603
e-value: 4.3E-7
score: 27.7
coord: 257..289
e-value: 3.8E-10
score: 37.3
coord: 327..357
e-value: 5.7E-7
score: 27.3
coord: 396..424
e-value: 4.6E-5
score: 21.3
coord: 151..183
e-value: 0.0027
score: 15.8
coord: 500..533
e-value: 2.7E-8
score: 31.5
coord: 291..325
e-value: 3.8E-11
score: 40.5
coord: 186..219
e-value: 9.8E-9
score: 32.9
coord: 221..254
e-value: 1.6E-5
score: 22.8
coord: 360..393
e-value: 5.6E-6
score: 24.2
coord: 535..568
e-value: 9.8E-5
score: 20.3
coord: 466..498
e-value: 5.2E-9
score: 33.7
coord: 431..462
e-value: 4.1E-7
score: 27.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 393..427
score: 10.95
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 603..637
score: 11.345
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 428..462
score: 11.783
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 533..567
score: 10.852
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 183..217
score: 12.529
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 148..182
score: 10.501
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 77..112
score: 6.829
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 289..323
score: 13.789
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 218..253
score: 9.767
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 638..672
score: 9.876
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 463..497
score: 12.397
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 568..602
score: 10.753
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 113..147
score: 9.219
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 498..532
score: 12.441
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 359..392
score: 6.873
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 254..288
score: 13.187
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 324..358
score: 10.556
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 355..421
e-value: 2.1E-15
score: 58.7
coord: 422..492
e-value: 5.9E-18
score: 67.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 158..246
e-value: 3.0E-21
score: 78.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 247..354
e-value: 3.2E-33
score: 117.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 584..696
e-value: 1.5E-25
score: 91.6
coord: 493..583
e-value: 1.9E-25
score: 91.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy4G015010Cla018124Watermelon (97103) v1cgybwmB314
CsGy4G015010Csa4G308460Cucumber (Chinese Long) v2cgybcuB167
CsGy4G015010MELO3C003226Melon (DHL92) v3.5.1cgybmeB279
CsGy4G015010ClCG04G007230Watermelon (Charleston Gray)cgybwcgB282
CsGy4G015010CSPI04G15660Wild cucumber (PI 183967)cgybcpiB170
CsGy4G015010CmaCh03G003690Cucurbita maxima (Rimu)cgybcmaB533
CsGy4G015010CmaCh07G010700Cucurbita maxima (Rimu)cgybcmaB566
CsGy4G015010CmoCh03G003800Cucurbita moschata (Rifu)cgybcmoB507
CsGy4G015010Lsi01G015270Bottle gourd (USVL1VR-Ls)cgyblsiB236
CsGy4G015010Cp4.1LG10g08110Cucurbita pepo (Zucchini)cgybcpeB463
CsGy4G015010MELO3C003226.2Melon (DHL92) v3.6.1cgybmedB279
CsGy4G015010CsaV3_4G026020Cucumber (Chinese Long) v3cgybcucB171
CsGy4G015010Cla97C04G073830Watermelon (97103) v2cgybwmbB282
CsGy4G015010Bhi03G001664Wax gourdcgybwgoB374
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy4G015010Cucumber (Gy14) v2cgybcgybB083
CsGy4G015010Cucumber (Gy14) v2cgybcgybB130
CsGy4G015010Cucurbita maxima (Rimu)cgybcmaB488
CsGy4G015010Cucurbita maxima (Rimu)cgybcmaB509
CsGy4G015010Cucurbita maxima (Rimu)cgybcmaB548
CsGy4G015010Cucurbita maxima (Rimu)cgybcmaB550
CsGy4G015010Cucurbita maxima (Rimu)cgybcmaB556
CsGy4G015010Cucurbita maxima (Rimu)cgybcmaB561
CsGy4G015010Cucurbita maxima (Rimu)cgybcmaB562
CsGy4G015010Cucurbita moschata (Rifu)cgybcmoB458
CsGy4G015010Cucurbita moschata (Rifu)cgybcmoB480
CsGy4G015010Cucurbita moschata (Rifu)cgybcmoB522
CsGy4G015010Cucurbita moschata (Rifu)cgybcmoB525
CsGy4G015010Cucurbita moschata (Rifu)cgybcmoB530
CsGy4G015010Cucurbita moschata (Rifu)cgybcmoB536
CsGy4G015010Cucurbita moschata (Rifu)cgybcmoB537
CsGy4G015010Cucurbita pepo (Zucchini)cgybcpeB510
CsGy4G015010Cucurbita pepo (Zucchini)cgybcpeB514
CsGy4G015010Cucurbita pepo (Zucchini)cgybcpeB519
CsGy4G015010Cucurbita pepo (Zucchini)cgybcpeB532
CsGy4G015010Cucurbita pepo (Zucchini)cgybcpeB555
CsGy4G015010Cucurbita pepo (Zucchini)cgybcpeB576
CsGy4G015010Cucumber (Chinese Long) v2cgybcuB162
CsGy4G015010Cucumber (Chinese Long) v2cgybcuB178
CsGy4G015010Cucumber (Chinese Long) v2cgybcuB184
CsGy4G015010Bottle gourd (USVL1VR-Ls)cgyblsiB258
CsGy4G015010Bottle gourd (USVL1VR-Ls)cgyblsiB262
CsGy4G015010Melon (DHL92) v3.5.1cgybmeB244
CsGy4G015010Melon (DHL92) v3.5.1cgybmeB248
CsGy4G015010Melon (DHL92) v3.6.1cgybmedB244
CsGy4G015010Melon (DHL92) v3.6.1cgybmedB246
CsGy4G015010Watermelon (Charleston Gray)cgybwcgB252
CsGy4G015010Watermelon (Charleston Gray)cgybwcgB262
CsGy4G015010Watermelon (Charleston Gray)cgybwcgB301
CsGy4G015010Watermelon (97103) v1cgybwmB270
CsGy4G015010Watermelon (97103) v1cgybwmB320
CsGy4G015010Wild cucumber (PI 183967)cgybcpiB165
CsGy4G015010Wild cucumber (PI 183967)cgybcpiB181
CsGy4G015010Wild cucumber (PI 183967)cgybcpiB187
CsGy4G015010Silver-seed gourdcarcgybB0020
CsGy4G015010Silver-seed gourdcarcgybB0172
CsGy4G015010Silver-seed gourdcarcgybB0561
CsGy4G015010Silver-seed gourdcarcgybB0581
CsGy4G015010Silver-seed gourdcarcgybB0985
CsGy4G015010Cucumber (Chinese Long) v3cgybcucB169
CsGy4G015010Cucumber (Chinese Long) v3cgybcucB182
CsGy4G015010Cucumber (Chinese Long) v3cgybcucB189
CsGy4G015010Watermelon (97103) v2cgybwmbB260
CsGy4G015010Watermelon (97103) v2cgybwmbB271
CsGy4G015010Wax gourdcgybwgoB347
CsGy4G015010Wax gourdcgybwgoB370